ID:

dsi_4027

 Coordinate:

3l:12544574-12544864 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.11 -7.0 -7.0 -6.8

Flybase annnotation

CDS [3l_12544865_12544868_-]; five_prime_UTR [3l_12544869_12544947_-]; exon [3l_12544865_12544947_-]; exon [3l_12543992_12544573_-]; CDS [3l_12543992_12544573_-]; intron [3l_12544574_12544864_-]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGTTTTTTTTTATACATACCTGTCGTACAATTACTGGGGCGTTAATATGCGTAAGTGATAAGATAATGATTTAAAAAGCCCACTAAATGTGTAGCAAAGCAAATGAAACAAATAGAAAGGTCTTGGAAATTCAGAAACAACATTATTTGCGGAAAATTCGACTTTTATCAGCAGGTGGGACTTACGCCATTTTGGGCACTTGCCACCCCCCAGCTTTTATTTCTTTTTTTTGCCTATCGAAAATTGAGGTGCTCAGCTGATTGGTTATTTTGTTTTGCTACCGGCTTCGTTTGGGTTGTTATCTCTTTTAAAGCAAATTACAAACTGTGTACATTTTGCAGTACCGCTCTTTGGGACCATGCCGAATGGCGTCAGTTTGCCAAATCACCCG
***************************************************************************.............................(((.(((((((....((.(((......)))..))....))))))).......)))**************************************************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 M025
embryo
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
....TTTTTTTATACATACCTG................................................................................................................................................................................................................................................................................................................................................................................. 18 0 1 5.00 5 5 0 0 0 0 0 0 0 0
.....................GTCGTACAATTACTGGGGCG.............................................................................................................................................................................................................................................................................................................................................................. 20 0 1 3.00 3 3 0 0 0 0 0 0 0 0
................TACCTGTCGTACAATTACTGG.................................................................................................................................................................................................................................................................................................................................................................. 21 0 1 2.00 2 1 0 0 0 0 1 0 0 0
.....................GTCGTACAATTACTGGGG................................................................................................................................................................................................................................................................................................................................................................ 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................................AACATTATTTGCGGAAAATTC........................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.................ACCTGTCGTACAATTACTGGGG................................................................................................................................................................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............ATACCTGTCGTACAATTACT.................................................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................................................................................TTTTGCTACCGGCTTCGTTTAT................................................................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................AAGCCCACTAAATGTGTAGCA....................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................TTTGCCTATCGAAAATTGA................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................TTTGGGCAGTTATTTCTTTTAAA............................................................................... 23 3 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................TGCTCAGCTGATTGGTTATT.......................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CATTTTGCAGTACCGCTCTTTGGGAC.................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............ATACCTGTCGTACAATTACTGGGGC............................................................................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0
................................ACTGGGGCGGTGGTATGCGTA.................................................................................................................................................................................................................................................................................................................................................. 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0
.................................................................................................................AGAAAGGTCTTGGAAATTCAG................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................TTTATCAGCAGGTGGGACAA................................................................................................................................................................................................................ 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................ATTACTGGGGCGGTA........................................................................................................................................................................................................................................................................................................................................................... 15 1 4 0.25 1 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................................................................................................................................................................ACAGGACCGCTCTTTGGAAC.................................. 20 3 5 0.20 1 0 0 0 0 0 0 1 0 0
...............................................................................................................................................TATTTGCGGCAAAGCCGACTT................................................................................................................................................................................................................................... 21 3 6 0.17 1 0 0 1 0 0 0 0 0 0
.....................................................................................................AATGAAACAAGTCGACAGGT.............................................................................................................................................................................................................................................................................. 20 3 10 0.10 1 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................................................................................................................................................................GGCGTCAGTGTGCTAAA....... 17 2 14 0.07 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TCAAAAAAAAATATGTATGGACAGCATGTTAATGACCCCGCAATTATACGCATTCACTATTCTATTACTAAATTTTTCGGGTGATTTACACATCGTTTCGTTTACTTTGTTTATCTTTCCAGAACCTTTAAGTCTTTGTTGTAATAAACGCCTTTTAAGCTGAAAATAGTCGTCCACCCTGAATGCGGTAAAACCCGTGAACGGTGGGGGGTCGAAAATAAAGAAAAAAAACGGATAGCTTTTAACTCCACGAGTCGACTAACCAATAAAACAAAACGATGGCCGAAGCAAACCCAACAATAGAGAAAATTTCGTTTAATGTTTGACACATGTAAAACGTCATGGCGAGAAACCCTGGTACGGCTTACCGCAGTCAAACGGTTTAGTGGGC
****************************************************************************************************************************************************************************************************************************************.............................(((.(((((((....((.(((......)))..))....))))))).......)))*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 O001
Testis
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
...........................................................................................................................................................................GTCCACCCTGAATGCGGTAAAACCCGT................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 1 0 0 0
....................................................................................................................TTCCAGAACCTTTAAGTCT................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................ATGCCCGAAGCAAAGTCAACAAT.......................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................AAAAAAAACGGCTAGCT....................................................................................................................................................... 17 1 1 1.00 1 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................AGGGGGGTCGAAAATAAAG........................................................................................................................................................................ 19 1 1 1.00 1 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................................ATGCCCGAAGCAAAGTCAACAA........................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0
............................................................TCTATTACTAAATTTTTC......................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................CTAAATTTTTCGGGTGATTTA............................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................................................................GCCCGAAGCAAAGTCAACAAT.......................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................................................................................AAGTCTTTGTTGTAA....................................................................................................................................................................................................................................................... 15 0 4 0.25 1 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................................................................AAGAAACGATGGCCGAACCA..................................................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 1 0
...AAAAAAAAAATGTATGGA.................................................................................................................................................................................................................................................................................................................................................................................. 18 1 9 0.11 1 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................................................................AAAAAACGATGGCAGAAGCT..................................................................................................... 20 3 19 0.05 1 0 0 0 0 0 0 0 1
...AAAAAAAATCTGTATG.................................................................................................................................................................................................................................................................................................................................................................................... 16 1 20 0.05 1 0 0 0 1 0 0 0 0
..AAAAAAAAAAATGTCTGGAAAG............................................................................................................................................................................................................................................................................................................................................................................... 22 3 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:12544524-12544914 - dsi_4027 AGTTTTTTTTTAT-----AC-ATACCT--GTCGTACAATTACTG-GGGCGTTAATATGCGTAAGTGATAAGATAATGATTTAAA-A-AGCCCACTAAATGTGTAGCAAAGCAAA------TGAAACAAATAGAAAGGTCTT-GGAAATTCAGAAAC-AACATTATTTGC-GGAAAATT-CGACTTTTATCAGCAGGTGGGACTTACGCCATTTTGGGC---ACTTGCCACCC--C-----C--CAG--------------------------------------CTTTTATTTCTTT----TTT-TTGCCTA---TCGAAAATTG-AGGT--GCT------CAGCTGATTGG------------------------------------------TTATTTTGTTTTGCTA-CCGGCTTCGTTTGGGTTGTTATCTC-TTTTAAA---------------------------------------------G-CAAA------------------TTACAAACTGTGT--------ACATTTTGCAGTACCGCTCTTTGGGACCATGCCGAATGGCGTCAGTTTGCCAAATCACCCG
droSec2 scaffold_0:5026893-5027281 - AGTTTTTT-TTAT-----AC-ATACCT--GTCGTACAATTACTG-GGGCGTTAATATGCGTAAGTGATAAGATAATGATTTAAA-A-AGCCCACTATATGTGTAGCAAAGCAAA------TGAAACAAATAGAAAGATCTT-GGAAATTCAGAAAC-AACATTATTTGC-GGTAAATT-CGACTTTTATCAGCAGGTGGGACTTACGCCATTTTGGGC---ACTTGCCACCC--C-----C--CAG--------------------------------------CTTTTATTTCTTTTTATTTT-TTGCCTA---TCGAAAATTG-AGTT--GCT------CAGCTGATTGG------------------------------------------TTATTTTGTTTTGCTA-CCGGCTTCGTTTGGGTTGTTATCTC-TTTT---------------------------------------------------------------------AAATTACAAACTGTGT--------ACATTTTGCAGTACCGCTCTTTGGGACCATGGCGAATGGCGTCAGTTTGCCAAATCACCCG
dm3 chr3L:12842790-12843181 - AGTTTTTTTTTAT-----AC-ATACCT--GTCGTACAATTACTG-GGGCGTTAATATGCGTAAGTGATAAGATAATGATTTTAAAA-AGCCCACAAAATGTGTAGCAAAGAAAA------TGGAATAAATAGAAAGGTCTG-GGAAATTAAGAAAC-AACAGTATTTGC-GGTGAATT-CGACTTTTATCAGCAGGTGGGACTTACGCCATTTTGGGC---ACTTGCCACCC--C-----C--CAG--------------------------------------CTTTTATTTCCTT----TTT-TTACCTA---TCGAAAATTG-AGGT--GCT------CAGCTGATTGG------------------------------------------TTATTTTGTTTTGCTA-CCGGCTTCGTTTGGGTTGTTATCTC-TTTTAAA---------------------------------------------G-CAAA------------------TTACAAACTGTGT--------ACATTTTGCAGTACCGCTCTTTGGGACCATGCCGAATGGCGTCAGTTTGCCAAATCACCCG
droEre2 scaffold_4784:12855267-12855647 - AGTTTTTTTTTAC-----A--CTACCT--GTCGTACAATTACTG-GGGCGTTAATATGCGTAAGTGATAAGATAATGAGTTAAAGA-AGTCCACAAAATGTGTAGCAATGCAAA------TGGAACAAACAAAAAGGTCTG-GGAAATTGAAACAC-AATAGTATTTGC-GGTAAATT-CGACTTTTATCAACGGG--GGACTTACGCCATTTTGGGC---ACCTGCCACCC--C--------CAG--------------------------------------CTTTTATCCCTCT----TTT-TTGTCTA---TCGAAAATTG-AGGT--GCT------CAGCTGATTGT------------------------------------------TTATTTTGTTTTGCTA-CCGGCTTCGCTTAAATTTTTATCTCGTTTTAAA---------------------------------------------G-GAAA------------------TT-------TTG---------TTTATTTGCAGTACCGCTCTTTGGGACCATGCCGAACGGCGTCAGTTTGCCAAATCACCCG
droYak3 3L:12918484-12918879 - AGTTTTTTTTTAC-----A--CTACCT--GACGTACAATTACTG-GGGCGTTGATATGCGTAAGTGATAAGATAATGAGTTAAAAA-AGCCCACAAAATGTGTAGCAAAGCAAT------TGAAACAAATAAAAAGCCATG-GCAAATTAAGAAAC-AATAGTATTTGC-GGTAAATT-GGACTTTTATCAGCGGG--GCACTTACGCCATTTTGGGC---ACCTGCCACCC--C-----C--CAA--------------------------------------CATTTATCCCTTT----TTC-TTGTCTA---TCGAAAATTG-AGGT--GCT------CAGCTGATTGT------------------------------------------TTATTTTGTTTTGCTA-CCGGCTTCGTTTAAGTTTTTATCT---------------T-------------TAAA-----------CAAGTTGAAAG-CAAA------------------CTTTAATCTGTGT--------ACATTTTGCAGTACCGCTCTTTGGGACCATGCCGAATGGCGTCAGTTTGCCAAATCACCCG
droEug1 scf7180000409466:4940319-4940699 - ATTTTTT---TAC-----C-ACTACCT--GTCGTACAATTATTG-GGGCGTTAATATGCGTAAGTGATAAGATAATGAGTTAAAAA-AGCCCTCAATATGTGTAGCAAAACAAA------TGAAAGCTAAATAACTATTCA-GAAAAGTCAGGGAC-CGCCGTATTTTA-GTATAAAG-TAACTTTTATCAGCGGG--GTACTTACGCCATTTTGGAG---CCCTGCCACCC--C--------CAG--------------------------------------TT---------------TTCTGGTGCTA---TCGAAAATTT-GGGTC-TCT------CAGCTGATTGG------------------------------------------CTATTTTGTTTTGCTA-CCGGCTTCGCTTGGGCCTTTC---------------CTCT-------------TGAC-----------------------------TATAAATCGAAATATTTCAT-----TTA-------TTCTTATTTTTAGTACCGCTCTTTGGGACCATGCCGAATGGCGTCAGTTTGCCAAATCACCCA
droBia1 scf7180000302529:775567-775947 + ATTTTTTT--TACCTCACG-ACTACCT--GCCGTACAATTATTGGGGGCGTTAATATGCGTAAGTGATAAGATAATGAGATAAA-A-AGCTCTCAAAGTGTGTAGCAAAACAAG------GGGAAGCCAGGACATCCCATG-GAAAAGTCGGGGTT-AGCAGAACTTGT-GTTC-TTT-TGACTTTTATCAGCGGG--GGACTTACGCCATTTTGGAG---CCCTGCCACCC--C--------CAG--------------------------------------TT---------------TTCTGGGCCTA---TCGAAAATTG-GGGT--CCT------CAGCTGATTGG------------------------------------------CTCTTTTGTTTTGCTA-CCGGCTTCGTATTGGGGCTT-------------CCCTTGT-------------TGAC-----------------------------C-T----------AACTTACGATATATGT----A---ATCGCTTGCAGTACCGCTCTTTGGGACCATGCCGAACGGCGTAAGTTTGCCAAATCACCCG
droTak1 scf7180000415251:207343-207727 + TTTTTTACCTTAC-----C-ACTACCT--GTCGTACAATTATTGGGGGCGTTAATATGCGTAAGTGATAAGATAGTGAGTTAAAAA-AGCTCTCAAAAAGTGCAGCAAAACAAG------GGGGAGAGGGGGGAGGTCCTG-GGAAGATCGGGAAT-CGCTGTATTTAG-GTTCTGTT-CAACTTTTATCAGCGGG--GGACTTACGCCATGTTGGAG---CCCTACCACCC--C--------CAG--------------------------------------TT---------------TTCTGGGTCTA---TCGAAAATTG-AGGTCCCCC------CAGCTGATTGG------------------------------------------CTCTTTTGTTTTGCTAGCCGGCTTCGTTCTGGGATTT-------------C--CCCA-------------TTTTTT-----------------AAA-CA--TT-------------AT-CTATAAA-TCTA--------TCTATTTCGCAGTACCGCTCTTTGGGACCATGCCGAATGGCGTCAGTTTGCCAAATCACCCG
droEle1 scf7180000491255:1237630-1238008 - ATTTTTT---TAC--------CTACCT--GTCGTACAATTAGTG-GGGCGTTAAAATGCGTAAGTGAAAAAATAGTGAGTTAATAA-CGCTCTCAAAATGTGTAACCAAACAAG------CAGAACCAAGGAAAAGTCCAG-GGGAAGTCAGGAAT-TCCAGTATTTTT-GCTTAATT-TGACTTTTTTCAGCGGG--GGGCTTACGCCATTTTGGAG---CCCTGCCACCC--C---------AG--AAAAAAG------------------------------G-----------------AGGGGGCTA---TTAAAAATTG-GGGGC-TCT------CAGCTGATTGG------------------------------------------CTATTTTGTTTTGCTA-CCGGCTTGGGGTG--TTT---------------TTCTGCT-------------TGAT-----------------------------T-T----------AAGCCATAATAAATAT--AGAGTTATATTTTTCAGTACCCCTCTTTGGGACCATGCCGAATGGCGCCAGTTTGCCAAATCACCCG
droRho1 scf7180000766682:19781-20163 - ATTTTTT---TAC--------CTACCT--GTCGTACAATTACTG-GGGCGATAAAATGCGTAAGTGATAAGATAGTGAGTTAAAAA-AGCCTTTAAAATGTGTATCAAAACAAA------AGGAAGTTAGAAAAAGTCGCG-GGGAAGTTAGGACT-TGGTGTATTCTT-GAAATATT-TGACTTTTATCAGCAAG--GTACTTACGCCATTTTGGAG---CCCTGCCACCCACC-----C--CAGGAAAAAAAG------------------------------G-----------------TGGGGGCTA---TCAAAAATTG-GGGT--CCT------CAGCTGATTGG------------------------------------------CTGTTTTGTTTTGGTA-CCGGCTTGGG---GGTAT---------------TTCTGGT-------------TGAT-----------------------------T-T----------AGGTTATAACAAATAT--ACATATTTATTTTGCAGTACCGCTCTTTGGGACCATGCCGAATGGCGCCAGTTTGCCAAATCACCCG
droFic1 scf7180000453839:164549-164929 + ATTTTTT---TAC-----ACATTACCT--GTCGTACAATTACTG-GGGCGATAAAATGCGTAAGTAATAAGATAATGAGTTAAAAA-AGCACTCAAAATGTGCAACAAAACAAA------AGGAAGCAGAAAAAAGCACCG-TAAAGATCAGGAAT-TGATGTATTTAGTATTTTATT-TGGTTTTTGTCTGCGGG--AGACTTACGCCATTTTGGAG---CCCTGCCACCC--C--------CAG--AAAAAGA------------------------------T-----------------ATGTGGTTA---TCGGAAAATG-AGGT---CC------CAGCTGATTGG------------------------------------------CTATTTTGTTTTGCTA-CCGGCTTTGTTTTGGGTGGTT------------TTCTGTG-------------TGAA---------------------G-AGGATT-------------AACTTTCAAA-------------TTTATTTTGCAGTACCGCTCTTTGGGACCATGCCGAATGGCGTTAGTTTGCCAAATCACCCG
droKik1 scf7180000302272:489701-490086 - ATTTTTT---TAC-----A--CTACCTTTGGCGTACAATTGCGG-GGGCTATAATATGCGTAAGTGATGAAATAATAAGTTAAATA-AAACCTTAAAAGGTAAAACAAAGCATC------AGGAGTGAAAATAATGCTCTG-GAAAGGTCGAA-ACACGGGCCATTTGT-GTGGGCAT-CACCTGTAATCAGCGAG-GGCACTTACGCCATTTTGCAG---ACCACCCACCC--C-----C--CAAAGAGAAAAA------------------------------A-----------------TAGTGGTAA---TCGAGAATTTTGGGGCTCCG------CAGCTGATTG-------------------------------------------TTATTTTGCTTTATTA-CCGGCTTTGTTAATACCGTTA---------------TTTT-------------TAGT-----------------------------TATTT--------AAT-AGT-----A---TTGCTTACCTCCTTTGCAGTACCGCTCTTTGGGACCATGCCGAACGGCGTCAGTTTGCCAAATCACCCG
droAna3 scaffold_13337:19745079-19745275 + GCTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAAATTGGGATCCACACCCCCGGC------------------------------------------AGC--GTT------CAGCTGATTTA-------------------------------------------TATTTTGATTTTCTG-CCGGCTTTGATTTTGTCGTTA---------------CTATGAGCTTTTCCCCTTTAT-TGTCGTG-----------GAA-TA--TT-------------CT-C-ACCAACTTTGC----C--ATTCCTTTCTAGTACCGCTCTTTGGGACCATGCCGAGTGGCGTCAGTTTGCCAAATCACCCC
droBip1 scf7180000396360:933390-933779 + ---------------------------------------------GGGCG---ATATGCGTAAGTTTTAATTAAAATAGACGAAATCATTCCA-TAAATGTGTCTAAAAGCGTCAAGAAGTGAAACC-----TAAGG--TGGAAAATGTCAAGTTT-TGATGTTTTTCT-GGTTTATTTATGCCTTTTTCAGTGGG-GGAGCTTACGCCACTTTTCGGAGTGCCTGCCCC-------ACCCCCCACAAAAAAGACGAACTGAAAATTGAGATCCACACCCCCG---------------------------------------AT---GGT--GTT------CAGCTGTTTCA-------------------------------------------TATTTTGATTTGCTG-CCGGCTATGTTCGATTCGTTT---------------CTAAGACCTTTTT----TAAA-AATTGTTAAACATTTTTTAAAAAA-T------------------TTTTTAAAATTGT----A--ATTCTTATCTAGTACCGCTCTTTGGGACCATGCCGAATGGCGTCAGTCTGCCAAATCACCCC
dp5 XR_group6:11623419-11623656 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTACGCCATTTTGGGG---CCCTATCACCCACCCCGCCCCCAAGAA-ATAATCGAATTGTAAC-CAGATTCCAT-------------ACCCCACT----CCC-TGGCCTACTTTCCAAGGTT---GTC--CTT------CAGCTGATTGTTATTACCGGCTTTCTGA-------------------------CTC--TTTTTTTTCTG-TTGGTATTGATTT--------------------------------------------------------------------------------------AATTCAT-----T---TTCCTTCTCTTTTCTGCAGTACCGCTCTTTGGGACCATGCCGAACGGCGTCAGTTTGCCAAATCATCCG
droPer2 scaffold_20:1548315-1548553 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTACGCCATTTTGGAG---CCCTATCACCCACCCCGCCCCCAAGAA-ATAATCGAATTGTAAC-CAGATTCCAT-------------ACCCCACT----CCC-TGGCCTACTTTCCAAGGTT---GTC--CTT------CAGCTGATTGTTATTACCGGCTTTCTGA-------------------------CTCTTT-TTTTTTCTG-TTGGTATTGATTT--------------------------------------------------------------------------------------AATTCAT-----T---TTCCTTCTCTTTTCTGCAGTACCGCTCTTTGGGACCATGCCGAACGGCGTCAGTTTGCCAAATCATCCG
droWil2 scf2_1100000004511:5456644-5456713 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAATTGAT---------TCCATTTCCAGTGCCACTCTTTGGGACCATGCCGAATGGCGTCAGTTTGCCAAATCATCCG
droVir3 scaffold_13049:22679709-22679919 + CGCTTTGT---GC-----G-CTTACAT--ATTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCT----CTC-TCGCTTTGCTGTTTGGTTC---GTG--CTTGACAAACAGCTGATTTGTATT--------TGTTATTTTTTTTCTTCTGTTGTTTTTTGTTTTCTTTGCCCTACTA-CCGGTCTGACAGTTGG--------------------------------------------------------------------------------------TTATACCCGTT--------TTCCTCTTTGTAGTACCAGTTTTTGGGAGTATGCCAAGTGGCGTCGGCTTGCCAAATCATCCG
droMoj3 scaffold_6680:17298978-17299033 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAGTGCCAGTTTTTGGGAGTATGCCAAATGGCGTCAGCTTGCCAAATCATCCA
droGri2 scaffold_15110:20852653-20852766 - TTTGTTTTCGTTT-----CT-CTCTCT--TTCATATCAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTTGTTTTCTT--TTTGTTG--------------------------------------------------------------------------------------------------------------------TGGTTTTTTAGTACCAGTTTTTGGGAGCATGCCAAACGGCGTCAGCTTGCCAAATCATCCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGTTTTTTTTTAT-----AC-ATACCT--GTCGTACAATTACTG-GGGCGTTAATATGCGTAAGTGATAAGATAATGATTTAAA-A-AGCCCACTAAATGTGTAGCAAAGCAAA------TGAAACAAATAGAAAGGTCTT-GGAAATTCAGAAAC-AACATTATTTGC-GGAAAATT-CGACTTTTATCAGCAGGTGGGACTTACGCCATTTTGGGC---ACTTGCCACCC--C-----C--CAG--------------------------------------CTTTTATTTCTTT----TTT-TTGCCTA---TCGAAAATTG-AGGT--GCT------CAGCTGATTGG------------------------------------------TTATTTTGTTTTGCTA-CCGGCTTCGTTTGGGTTGTTATCTC-TTTTAAA---------------------------------------------G-CAAA------------------TTACAAACTGTGT--------ACATTTTGCAGTACCGCTCTTTGGGACCATGCCGAATGGCGTCAGTTTGCCAAATCACCCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....TTTTTTTAT-----AC-ATACCT--G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.00550000000000000000
.............................GTCGTACAATTACTG-GGGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00330000000000000000
......................TACCT--GTCGTACAATTACTG-G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00210000010000000000
.............................GTCGTACAATTACTG-GGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000000000
.............................................................................................................................................................AACATTATTTGC-GGAAAATT-C...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
.......................ACCT--GTCGTACAATTACTG-GGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
.....................ATACCT--GTCGTACAATTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCTA-CCGGCTTCGTTTAT..........................................................................................................................................................................2211.00100000000000001000
.....................................................................................A-AGCCCACTAAATGTGTAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
...............................................................................................................................................................................................................................................................................................................T-TTGCCTA---TCGAAAATTG-A............................................................................................................................................................................................................................................................................1911.00110000000000000000
.........................................................................................................................................................................................................................................................................................................................................T--GCT------CAGCTGATTGG------------------------------------------TTATT....................................................................................................................................................................................................2011.00100000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTTGCAGTACCGCTCTTTGGGAC..................................2611.00110000000000000000
.....................ATACCT--GTCGTACAATTACTG-GGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
..................................................................................................................................AGAAAGGTCTT-GGAAATTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
........................................................................................................................................................................................TTTATCAGCAGGTGGGACAA.......................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
droSec2
AGTTTTTT-TTAT-----AC-ATACCT--GTCGTACAATTACTG-GGGCGTTAATATGCGTAAGTGATAAGATAATGATTTAAA-A-AGCCCACTATATGTGTAGCAAAGCAAA------TGAAACAAATAGAAAGATCTT-GGAAATTCAGAAAC-AACATTATTTGC-GGTAAATT-CGACTTTTATCAGCAGGTGGGACTTACGCCATTTTGGGC---ACTTGCCACCC--C-----C--CAG--------------------------------------CTTTTATTTCTTTTTATTTT-TTGCCTA---TCGAAAATTG-AGTT--GCT------CAGCTGATTGG------------------------------------------TTATTTTGTTTTGCTA-CCGGCTTCGTTTGGGTTGTTATCTC-TTTT---------------------------------------------------------------------AAATTACAAACTGTGT--------ACATTTTGCAGTACCGCTCTTTGGGACCATGGCGAATGGCGTCAGTTTGCCAAATCACCCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................CGTACAATTACTG-GGGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040004
.........................CT--GTCGTACAATTACTG-GGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
........................CCT--GTCGTACAATTACTG-GGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.............................GTCGTACAATTACTG-GGGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
........................CCT--GTCGTACAATTACTG-G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...............................CGTACAATTACTG-GGGCGTTAATATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
...............................CGTACAATTACTG-GGGCGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
..................AC-ATACCT--GTCGTACAATTACTG-GGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
.........................................................................................................................................................................................................................................................................................................................................................................................................................A-CCGGCTTCGTTTGGGTTG......................................................................................................................................................................1911.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTCTTTGGGACCATGGCGAATGGCG....................2711.0010001
.......................ACCT--GTCGTACAATTACTG-......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
............................................................TAAGTGATAAGATAATGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
.....................ATACCT--GTCGTACAATTACTG-GG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...TTTTT-TTAT-----AC-ATACCT--GTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
dm3
AGTTTTTTTTTAT-----AC-ATACCT--GTCGTACAATTACTG-GGGCGTTAATATGCGTAAGTGATAAGATAATGATTTTAAAA-AGCCCACAAAATGTGTAGCAAAGAAAA------TGGAATAAATAGAAAGGTCTG-GGAAATTAAGAAAC-AACAGTATTTGC-GGTGAATT-CGACTTTTATCAGCAGGTGGGACTTACGCCATTTTGGGC---ACTTGCCACCC--C-----C--CAG--------------------------------------CTTTTATTTCCTT----TTT-TTACCTA---TCGAAAATTG-AGGT--GCT------CAGCTGATTGG------------------------------------------TTATTTTGTTTTGCTA-CCGGCTTCGTTTGGGTTGTTATCTC-TTTTAAA---------------------------------------------G-CAAA------------------TTACAAACTGTGT--------ACATTTTGCAGTACCGCTCTTTGGGACCATGCCGAATGGCGTCAGTTTGCCAAATCACCCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................CGTACAATTACTG-GGGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000012000000000000000000000001001000000000001000001000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGAATGGCGTCAGTTTGCCA.........2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000200000000000000000
.............................GTCGTACAATTACTG-GGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010010000000000000000000000000000000000000000
........................................ACTG-GGGCGTTAATATGCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGGGACCATGCCGAATGGCGT...................2512.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TTACTG-GGGCGTTAATATGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCGAATGGCGTCAGTTTGC...........2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................ATTACTG-GGGCGTTAATATGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................GTCGTACAATTACTG-GGGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000000000000000000000000000000000000000
.....................................ATTACTG-GGGCGTTAATATGCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGTTTGCCAAATCACCCG2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CTTTTATCAGCAGGTGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCGAATGGCGTCAGTTTGCCAAATC.....2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTTTGGGACCATGCCGAATGGCGTC..................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CCT--GTCGTACAATTACTG-GGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000010000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGACCATGCCGAATGGC.....................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................ATGCGTAAGTGATAAGATAATGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
........................CCT--GTCGTACAATTACTG-GG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CTG-GGGCGTTAATATGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................AATTAAGAAAC-AACAGTATTTGC-GGT......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................GACTTTTATCAGCAGGTGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.......................ACCT--GTCGTACAATTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
..........................T--GTCGTACAATTACTG-GGGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...........AT-----AC-ATACCT--GTCGTACAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCGCTCTTTGGGACCATGC.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCATGCCGAATGGCGTCAGT...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...............................CGTACAATTACTG-GGGCGTTAATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTATCTC-TTTTAAA---------------------------------------------G-C.......................................................................................................1911.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TGGGACTTACGCCATTTTGGG..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................AATAAATAGAAAGGTCTG-GGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCCGAATGGCGTCAGTTTGCCA.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................ATGCGTAAGTGATAAGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCGTACAATTACTG-GGGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.....................................ATTACTG-GGGCGTTAATATGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................ATGCGTAAGTGATAAGATAATGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAATGGCGTCAGTTTGCCA.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................TACAATTACTG-GGGCGTTAATATGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTCAGTTTGCCAAATCACT..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTTAT-----AC-ATACCT--GTCGTACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TTTATCAGCAGGTGGGACTTA......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.........................CT--GTCGTACAATTACTG-GGGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.............................GTCGTACAATTACTG-GGGCGTTAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................AAA-AGCCCACAAAATGTGTAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCGCTCTTTGGGACCATGCCGAA.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................T--GTCGTACAATTACTG-GGGCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................GTTAATATGCGTAAGTGATAAGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................ATGCGTAAGTGATAAGATAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................GTACAATTACTG-GGGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........TTAT-----AC-ATACCT--GTCGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................GACTTTTATCAGCAGGTG.............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGCCGAATGGCGTCAGTTTGCCA.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................ATTACTG-GGGCGTTAATATGCGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................ATACCT--GTCGTACAATTACTG-GGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTCTTTGGGACCATGCC............................2011.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTCTTTGGGACCATG..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................GATTGG------------------------------------------TTATTTTGTTTTG............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................A-CCGGCTTCGTTTGGGTTG......................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.......................ACCT--GTCGTACAATTACTG-......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................ATACCT--GTCGTACAATTACTG-GGGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCGCTCTTTGGGACCA................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................GAAAGGTCTG-GGAAATTAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
................................................................................................................................................................................TT-CGACTTTTATCAGCAGGTG.............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGTACAATTACTG-GGGCGTTAATATGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................T--GTCGTACAATTACTG-GG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CT--GTCGTACAATTACTG-GGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...................................................................................................................................................................................CGACTTTTATCAGCAGGTGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.............................................................................................................................TAAATAGAAAGGTCTG-GGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.....................ATACCT--GTCGTACAATTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................ACTG-GGGCGTTAATATGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................TT-CGACTTTTATCAGCAGGTGGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................ATGCGTAAGTGATAAGATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................TCGTACAATTACTG-GGGCGTTAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTA-CCGGCTTCGTTTGG..........................................................................................................................................................................2011.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTAATATGCGTAAGTGATAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................ATTACTG-GGGCGTTAATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................AGAAAGGTCTG-GGAAATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
AGTTTTTTTTTAT-----AC-ATACCT--GTCGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...........................................................GTAAGTGATAAGATAATGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATACCT--GTCGTACAATTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................TG-GGGCGTTAATATGCGTAAGTGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................T--GTCGTACAATTACTG-GGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AAGAAAC-AACAGTATTTGC-GG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................T--GTCGTACAATTACTG-GGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GTACAATTACTG-GGGCGTTAATAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CTA-CCGGCTTCGTTTGGGTTG......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGTTTTTTTTTAC-----A--CTACCT--GTCGTACAATTACTG-GGGCGTTAATATGCGTAAGTGATAAGATAATGAGTTAAAGA-AGTCCACAAAATGTGTAGCAATGCAAA------TGGAACAAACAAAAAGGTCTG-GGAAATTGAAACAC-AATAGTATTTGC-GGTAAATT-CGACTTTTATCAACGGG--GGACTTACGCCATTTTGGGC---ACCTGCCACCC--C--------CAG--------------------------------------CTTTTATCCCTCT----TTT-TTGTCTA---TCGAAAATTG-AGGT--GCT------CAGCTGATTGT------------------------------------------TTATTTTGTTTTGCTA-CCGGCTTCGCTTAAATTTTTATCTCGTTTTAAA---------------------------------------------G-GAAA------------------TT-------TTG---------TTTATTTGCAGTACCGCTCTTTGGGACCATGCCGAACGGCGTCAGTTTGCCAAATCACCCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................AGATAATGAGTTAAAGA-A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.........................................................................................................................................TCTG-GGAAATTGAAACAC-A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
...........................................................GTAAGTGATAAGATAATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
droYak3
AGTTTTTTTTTAC-----A--CTACCT--GACGTACAATTACTG-GGGCGTTGATATGCGTAAGTGATAAGATAATGAGTTAAAAA-AGCCCACAAAATGTGTAGCAAAGCAAT------TGAAACAAATAAAAAGCCATG-GCAAATTAAGAAAC-AATAGTATTTGC-GGTAAATT-GGACTTTTATCAGCGGG--GCACTTACGCCATTTTGGGC---ACCTGCCACCC--C-----C--CAA--------------------------------------CATTTATCCCTTT----TTC-TTGTCTA---TCGAAAATTG-AGGT--GCT------CAGCTGATTGT------------------------------------------TTATTTTGTTTTGCTA-CCGGCTTCGTTTAAGTTTTTATCT---------------T-------------TAAA-----------CAAGTTGAAAG-CAAA------------------CTTTAATCTGTGT--------ACATTTTGCAGTACCGCTCTTTGGGACCATGCCGAATGGCGTCAGTTTGCCAAATCACCCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................TACCT--GACGTACAATTAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-CAAA------------------CTTTAATCTGTGT--------ACATTTTG.....................................................2611.00100100000000
................................GTACAATTACTG-GGGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
...............................CGTACAATTACTG-GGGCGTTGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000100000
droEug1
ATTTTTT---TAC-----C-ACTACCT--GTCGTACAATTATTG-GGGCGTTAATATGCGTAAGTGATAAGATAATGAGTTAAAAA-AGCCCTCAATATGTGTAGCAAAACAAA------TGAAAGCTAAATAACTATTCA-GAAAAGTCAGGGAC-CGCCGTATTTTA-GTATAAAG-TAACTTTTATCAGCGGG--GTACTTACGCCATTTTGGAG---CCCTGCCACCC--C--------CAG--------------------------------------TT---------------TTCTGGTGCTA---TCGAAAATTT-GGGTC-TCT------CAGCTGATTGG------------------------------------------CTATTTTGTTTTGCTA-CCGGCTTCGCTTGGGCCTTTC---------------CTCT-------------TGAC-----------------------------TATAAATCGAAATATTTCAT-----TTA-------TTCTTATTTTTAGTACCGCTCTTTGGGACCATGCCGAATGGCGTCAGTTTGCCAAATCACCCASizeHit CountTotal NormTotal
No Reads
droBia1
ATTTTTTT--TACCTCACG-ACTACCT--GCCGTACAATTATTGGGGGCGTTAATATGCGTAAGTGATAAGATAATGAGATAAA-A-AGCTCTCAAAGTGTGTAGCAAAACAAG------GGGAAGCCAGGACATCCCATG-GAAAAGTCGGGGTT-AGCAGAACTTGT-GTTC-TTT-TGACTTTTATCAGCGGG--GGACTTACGCCATTTTGGAG---CCCTGCCACCC--C--------CAG--------------------------------------TT---------------TTCTGGGCCTA---TCGAAAATTG-GGGT--CCT------CAGCTGATTGG------------------------------------------CTCTTTTGTTTTGCTA-CCGGCTTCGTATTGGGGCTT-------------CCCTTGT-------------TGAC-----------------------------C-T----------AACTTACGATATATGT----A---ATCGCTTGCAGTACCGCTCTTTGGGACCATGCCGAACGGCGTAAGTTTGCCAAATCACCCGSizeHit CountTotal NormTotal
No Reads
droTak1
TTTTTTACCTTAC-----C-ACTACCT--GTCGTACAATTATTGGGGGCGTTAATATGCGTAAGTGATAAGATAGTGAGTTAAAAA-AGCTCTCAAAAAGTGCAGCAAAACAAG------GGGGAGAGGGGGGAGGTCCTG-GGAAGATCGGGAAT-CGCTGTATTTAG-GTTCTGTT-CAACTTTTATCAGCGGG--GGACTTACGCCATGTTGGAG---CCCTACCACCC--C--------CAG--------------------------------------TT---------------TTCTGGGTCTA---TCGAAAATTG-AGGTCCCCC------CAGCTGATTGG------------------------------------------CTCTTTTGTTTTGCTAGCCGGCTTCGTTCTGGGATTT-------------C--CCCA-------------TTTTTT-----------------AAA-CA--TT-------------AT-CTATAAA-TCTA--------TCTATTTCGCAGTACCGCTCTTTGGGACCATGCCGAATGGCGTCAGTTTGCCAAATCACCCGSizeHit CountTotal NormTotal
No Reads
droEle1
ATTTTTT---TAC--------CTACCT--GTCGTACAATTAGTG-GGGCGTTAAAATGCGTAAGTGAAAAAATAGTGAGTTAATAA-CGCTCTCAAAATGTGTAACCAAACAAG------CAGAACCAAGGAAAAGTCCAG-GGGAAGTCAGGAAT-TCCAGTATTTTT-GCTTAATT-TGACTTTTTTCAGCGGG--GGGCTTACGCCATTTTGGAG---CCCTGCCACCC--C---------AG--AAAAAAG------------------------------G-----------------AGGGGGCTA---TTAAAAATTG-GGGGC-TCT------CAGCTGATTGG------------------------------------------CTATTTTGTTTTGCTA-CCGGCTTGGGGTG--TTT---------------TTCTGCT-------------TGAT-----------------------------T-T----------AAGCCATAATAAATAT--AGAGTTATATTTTTCAGTACCCCTCTTTGGGACCATGCCGAATGGCGCCAGTTTGCCAAATCACCCGSizeHit CountTotal NormTotal
No Reads
droRho1
ATTTTTT---TAC--------CTACCT--GTCGTACAATTACTG-GGGCGATAAAATGCGTAAGTGATAAGATAGTGAGTTAAAAA-AGCCTTTAAAATGTGTATCAAAACAAA------AGGAAGTTAGAAAAAGTCGCG-GGGAAGTTAGGACT-TGGTGTATTCTT-GAAATATT-TGACTTTTATCAGCAAG--GTACTTACGCCATTTTGGAG---CCCTGCCACCCACC-----C--CAGGAAAAAAAG------------------------------G-----------------TGGGGGCTA---TCAAAAATTG-GGGT--CCT------CAGCTGATTGG------------------------------------------CTGTTTTGTTTTGGTA-CCGGCTTGGG---GGTAT---------------TTCTGGT-------------TGAT-----------------------------T-T----------AGGTTATAACAAATAT--ACATATTTATTTTGCAGTACCGCTCTTTGGGACCATGCCGAATGGCGCCAGTTTGCCAAATCACCCGSizeHit CountTotal NormTotal
No Reads
droFic1
ATTTTTT---TAC-----ACATTACCT--GTCGTACAATTACTG-GGGCGATAAAATGCGTAAGTAATAAGATAATGAGTTAAAAA-AGCACTCAAAATGTGCAACAAAACAAA------AGGAAGCAGAAAAAAGCACCG-TAAAGATCAGGAAT-TGATGTATTTAGTATTTTATT-TGGTTTTTGTCTGCGGG--AGACTTACGCCATTTTGGAG---CCCTGCCACCC--C--------CAG--AAAAAGA------------------------------T-----------------ATGTGGTTA---TCGGAAAATG-AGGT---CC------CAGCTGATTGG------------------------------------------CTATTTTGTTTTGCTA-CCGGCTTTGTTTTGGGTGGTT------------TTCTGTG-------------TGAA---------------------G-AGGATT-------------AACTTTCAAA-------------TTTATTTTGCAGTACCGCTCTTTGGGACCATGCCGAATGGCGTTAGTTTGCCAAATCACCCGSizeHit CountTotal NormTotal
No Reads
droKik1
ATTTTTT---TAC-----A--CTACCTTTGGCGTACAATTGCGG-GGGCTATAATATGCGTAAGTGATGAAATAATAAGTTAAATA-AAACCTTAAAAGGTAAAACAAAGCATC------AGGAGTGAAAATAATGCTCTG-GAAAGGTCGAA-ACACGGGCCATTTGT-GTGGGCAT-CACCTGTAATCAGCGAG-GGCACTTACGCCATTTTGCAG---ACCACCCACCC--C-----C--CAAAGAGAAAAA------------------------------A-----------------TAGTGGTAA---TCGAGAATTTTGGGGCTCCG------CAGCTGATTG-------------------------------------------TTATTTTGCTTTATTA-CCGGCTTTGTTAATACCGTTA---------------TTTT-------------TAGT-----------------------------TATTT--------AAT-AGT-----A---TTGCTTACCTCCTTTGCAGTACCGCTCTTTGGGACCATGCCGAACGGCGTCAGTTTGCCAAATCACCCGSizeHit CountTotal NormTotal
No Reads
droAna3
GCTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAAATTGGGATCCACACCCCCGGC------------------------------------------AGC--GTT------CAGCTGATTTA-------------------------------------------TATTTTGATTTTCTG-CCGGCTTTGATTTTGTCGTTA---------------CTATGAGCTTTTCCCCTTTAT-TGTCGTG-----------GAA-TA--TT-------------CT-C-ACCAACTTTGC----C--ATTCCTTTCTAGTACCGCTCTTTGGGACCATGCCGAGTGGCGTCAGTTTGCCAAATCACCCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
---------------------------------------------GGGCG---ATATGCGTAAGTTTTAATTAAAATAGACGAAATCATTCCA-TAAATGTGTCTAAAAGCGTCAAGAAGTGAAACC-----TAAGG--TGGAAAATGTCAAGTTT-TGATGTTTTTCT-GGTTTATTTATGCCTTTTTCAGTGGG-GGAGCTTACGCCACTTTTCGGAGTGCCTGCCCC-------ACCCCCCACAAAAAAGACGAACTGAAAATTGAGATCCACACCCCCG---------------------------------------AT---GGT--GTT------CAGCTGTTTCA-------------------------------------------TATTTTGATTTGCTG-CCGGCTATGTTCGATTCGTTT---------------CTAAGACCTTTTT----TAAA-AATTGTTAAACATTTTTTAAAAAA-T------------------TTTTTAAAATTGT----A--ATTCTTATCTAGTACCGCTCTTTGGGACCATGCCGAATGGCGTCAGTCTGCCAAATCACCCCSizeHit CountTotal NormTotal
No Reads
dp5
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTACGCCATTTTGGGG---CCCTATCACCCACCCCGCCCCCAAGAA-ATAATCGAATTGTAAC-CAGATTCCAT-------------ACCCCACT----CCC-TGGCCTACTTTCCAAGGTT---GTC--CTT------CAGCTGATTGTTATTACCGGCTTTCTGA-------------------------CTC--TTTTTTTTCTG-TTGGTATTGATTT--------------------------------------------------------------------------------------AATTCAT-----T---TTCCTTCTCTTTTCTGCAGTACCGCTCTTTGGGACCATGCCGAACGGCGTCAGTTTGCCAAATCATCCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGACCATGCCGAACGGCGT...................2311.0010100000000
droPer2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTACGCCATTTTGGAG---CCCTATCACCCACCCCGCCCCCAAGAA-ATAATCGAATTGTAAC-CAGATTCCAT-------------ACCCCACT----CCC-TGGCCTACTTTCCAAGGTT---GTC--CTT------CAGCTGATTGTTATTACCGGCTTTCTGA-------------------------CTCTTT-TTTTTTCTG-TTGGTATTGATTT--------------------------------------------------------------------------------------AATTCAT-----T---TTCCTTCTCTTTTCTGCAGTACCGCTCTTTGGGACCATGCCGAACGGCGTCAGTTTGCCAAATCATCCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGGACCATGCCGAACGG......................2111.001001000
droWil2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAATTGAT---------TCCATTTCCAGTGCCACTCTTTGGGACCATGCCGAATGGCGTCAGTTTGCCAAATCATCCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAATGGCGTCAGTTTGC...........1911.00100100
droVir3
CGCTTTGT---GC-----G-CTTACAT--ATTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCT----CTC-TCGCTTTGCTGTTTGGTTC---GTG--CTTGACAAACAGCTGATTTGTATT--------TGTTATTTTTTTTCTTCTGTTGTTTTTTGTTTTCTTTGCCCTACTA-CCGGTCTGACAGTTGG--------------------------------------------------------------------------------------TTATACCCGTT--------TTCCTCTTTGTAGTACCAGTTTTTGGGAGTATGCCAAGTGGCGTCGGCTTGCCAAATCATCCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTTTGGGAGTATGCCAAGTGGCGTC..................2811.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGGAGTATGCCAAGT........................1911.001000000000000000000000000000000000010000000000000000000000000000
droMoj3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAGTGCCAGTTTTTGGGAGTATGCCAAATGGCGTCAGCTTGCCAAATCATCCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TTTGTTTTCGTTT-----CT-CTCTCT--TTCATATCAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTTGTTTTCTT--TTTGTTG--------------------------------------------------------------------------------------------------------------------TGGTTTTTTAGTACCAGTTTTTGGGAGCATGCCAAACGGCGTCAGCTTGCCAAATCATCCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 11:05 AM