ID:

dsi_3974

 Coordinate:

3r:25541514-25541813 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-46.9 -46.9 -46.9

Flybase annnotation

Antisense to five_prime_UTR [3r_25541412_25541513_+]; Antisense to exon [3r_25541412_25541513_+]; Antisense to five_prime_UTR [3r_25541730_25542052_+]; Antisense to exon [3r_25541730_25542052_+]; Antisense to intron [3r_25541514_25541729_+]

No Repeatable elements found

Sense Strand Reads

CATTCAAACATGGCCGCTGCCAGTGTTGTTGTTGCTGCGCCTGCTGGAAGGTGACTCACGGCAGGGTTGTCAGCGTGTGCAAAAGATGGACGCTGCACTTTGGATTTCAAGTGGTTTCCTGAGATTTGTATCAGCTAACGATGAGGATTGAAATTAATCTGCAGATAAGCGATCTACATCCTAAGAAATTGTTCTTAGTATTGATATAATGGCAATTCACAGCAGCAAAGGCTTACATGTATCGAGCTTGAGACTGCTGCTATTAACAATTCATATTTTCGCTATGTTCGGAGTTTCTGTAGAGTTTCCCCAATTAACAGGCAAATTATGTAATTTGTAAGTTTTCCCAGCATGTATCCCTCTTATCAAGTGTCATTCTTGGAGCTCTGCAGGCGACACG
********************************************************************((((..((((.(((..(((((((((((((..(((.(((((((((.(((..((((........))))..))).)).....))))))))))..))).....)))).))..))))(((((((....)))))))..)))))))..))))......((((((...((((((.........))))))....))))))......*************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
....................................................................GTCAGCGTGTGCAAAAGATG........................................................................................................................................................................................................................................................................................................................ 20 0 1 2.00 2 0 0 2 0 0 0 0 0 0
..........................................................................................CGCTGCACTTTGGATTTCAAG................................................................................................................................................................................................................................................................................................. 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0
...................................................................................AGATGGGCGCTGCACTTTGG......................................................................................................................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................................................TGGAGCTCTGCAGGCGACACG 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................AAAAGATGGGCGCTGCACTTT........................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................AGTGTCATTCTTGGAGCTCTG........... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................AGCTTGAGACTGCTGCTATTA....................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................AAAAGATGGGCGCTGCACTT............................................................................................................................................................................................................................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................AATTTGTAAGTTTTCCCAGCAA............................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................................................TTGGAGCTCTGCAGGCGACA.. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................TTGGATTTCAAGTGGTTTCCT........................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.......................................................................AGCGTGTGCAAAAGATGGGCG.................................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................TAAGTTTTCCCAGCATGTAT........................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................AGCTTGAGACTGCTGCTATT........................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................GTTGTTGTTGCTGCGCCTG..................................................................................................................................................................................................................................................................................................................................................................... 19 0 2 0.50 1 0 0 0 0 0 1 0 0 0
.............................................................................TGCAGAAGATGGACATTGCACT............................................................................................................................................................................................................................................................................................................. 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0
.......ATATGGCCGCTGCTAGTGTT..................................................................................................................................................................................................................................................................................................................................................................................... 20 2 2 0.50 1 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................................CTTGGAGCTCTGCAGGCGTAT.. 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................ATTAACTGGCGAATTATGTGA................................................................... 21 3 5 0.20 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................TTCTGAGCATTGATATAAT.............................................................................................................................................................................................. 19 2 10 0.20 2 0 0 0 0 0 0 2 0 0
......................................................................................................................................................................................................................................................CTAGAGACTGCTGCT........................................................................................................................................... 15 1 5 0.20 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................TTGCTATGGTTGGAGTTTCTG..................................................................................................... 21 3 12 0.17 2 0 0 0 0 2 0 0 0 0
.............................................................................................................................................................................................................TTATTGGCAATTCATAGCAGC.............................................................................................................................................................................. 21 3 6 0.17 1 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................................................TGCATGTATCGAGCCTGAC.................................................................................................................................................... 19 3 8 0.13 1 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................................AATGGCAATTCACGG.................................................................................................................................................................................. 15 1 9 0.11 1 0 0 0 0 0 0 0 0 1
...................................................................................................................................................................................................................................................................................TTTTGGCTGTGTTCGGCGTT......................................................................................................... 20 3 18 0.06 1 1 0 0 0 0 0 0 0 0
................................................................................AAAAGATGGACGCTTGA............................................................................................................................................................................................................................................................................................................... 17 2 19 0.05 1 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................................................................................TGTAGCTATGTTCGGA............................................................................................................ 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

######################################################################################################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTAAGTTTGTACCGGCGACGGTCACAACAACAACGACGCGGACGACCTTCCACTGAGTGCCGTCCCAACAGTCGCACACGTTTTCTACCTGCGACGTGAAACCTAAAGTTCACCAAAGGACTCTAAACATAGTCGATTGCTACTCCTAACTTTAATTAGACGTCTATTCGCTAGATGTAGGATTCTTTAACAAGAATCATAACTATATTACCGTTAAGTGTCGTCGTTTCCGAATGTACATAGCTCGAACTCTGACGACGATAATTGTTAAGTATAAAAGCGATACAAGCCTCAAAGACATCTCAAAGGGGTTAATTGTCCGTTTAATACATTAAACATTCAAAAGGGTCGTACATAGGGAGAATAGTTCACAGTAAGAACCTCGAGACGTCCGCTGTGC
***************************************************************************************************************************************((((..((((.(((..(((((((((((((..(((.(((((((((.(((..((((........))))..))).)).....))))))))))..))).....)))).))..))))(((((((....)))))))..)))))))..))))......((((((...((((((.........))))))....))))))......******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
.........................................................................................................................................................................................................................................................................................................................................................GGGTCGTACATAGGGAGAAT................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................GGGGTTAATTGTCCGTTTAAT........................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0
..........................................................................CACACGTTTTCTACCTGCG................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................................ACAGTAAGAACCTCGAGACGT......... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................AAGCCTCTGAGACATCCCAAAGGGGTT....................................................................................... 27 3 1 1.00 1 0 0 1 0 0 0 0 0
..................................................................................................................................AGTCGTTTGCTACTCCTAACT......................................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
....GTTTGTACCGGCGACGGTCA........................................................................................................................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................TTCGGGTCGTACATAGGGAGA..................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................TACATTAAACATTCAAAAG...................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................GGGTCGTACATAGGGAGAATA.................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................GCCTCAAGGACATCT................................................................................................. 15 1 9 0.89 8 0 0 0 0 8 0 0 0
........................................................................................................................................................................................................................................................................................................................................................................................AGAACCTAGAGACGTCTG...... 18 2 6 0.17 1 0 0 0 0 0 0 1 0
....................GTCACAACAACAACGACG.......................................................................................................................................................................................................................................................................................................................................................................... 18 0 7 0.14 1 0 0 0 0 0 1 0 0
..AAAATTGTACCGGCGACG............................................................................................................................................................................................................................................................................................................................................................................................ 18 2 10 0.10 1 0 0 0 0 0 0 0 1
..............................................................................................................................................................................................................................................................................................AAGCCTGCAAGATATCTCA............................................................................................... 19 3 13 0.08 1 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................................................................................GGTCTCAAAGACATCT................................................................................................. 16 2 20 0.05 1 0 0 0 0 1 0 0 0
............CCGCGTCGGTCACAACA................................................................................................................................................................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 1
.......................................................................................................................................................................TCGCGGGATGTAGGAATC....................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:25541464-25541863 - dsi_3974 CATTCAAAC------------------ATGGCCGCTGC--CAGTGTTGTTGT---TGCTGCG-CCTG---CTGGAAGGTGACTCACG------------------------GCAGGGTTGTCAGCGTGTGCAAAAGATGGACGCTGCACTTTG-GA------------------------TTTCAAGTGGTTTCCTGAGATT-TGTATCAGCTAACGATGA-GGATT------------------------GAAATTAA------------------------------------------TCTGCA-------------------GATAAGCGATCTAC------------------------------------------------------------------ATCCTAAGAAATTGTTC----------------------------------------------TTAGTATTGATATAATGGCAATTCACAGCAGCAAA-----------------------------------------------------------------------------------GGCTTACATGTAT-CGAG-CTTGAGACTGCTGCTATT---AAC----------AATTCATATTTTCGCTATGTTCGGA---------------------------------------------------------GTTTCTGTAGAGTTTCCCCAATTAACAGGCA-AATTATGTAATTTGTA----AG-TTTTCCCAGCATGTATCCCTCTTATCAAGTGTCATTCTTGGAGCTCTGCAGGCGACACG
droSec2 scaffold_4:5046968-5047366 - CATTCAAAC------------------ATGGCCGCTGC--CAGTGTTGTTGT---TGCTGCG-CCTG---CTGGAAGGTGACTCACG------------------------GCAGGGTTGTCAGCGTGTGCAAAAGATGGACGCTGCACTTTG-TA------------------------TTTCAAGTGGTTTCCTGAGATT-TTTATCAGCAAACGATGA-GGATT------------------------AAAATTAA------------------------------------------TCTGCA-------------------GATAAACGATCTAC------------------------------------------------------------------ATCCTAAGAAATTGTTT-----------------------------------------------TAGTTTTGATATAATGGCAATTCACAGCAGCAAA-----------------------------------------------------------------------------------GGCTTACATGTGT-CGAG-CTTGAGACTGCTGCTATT---AAA----------GATAGTTATTTTCGCTATGTTCGGA---------------------------------------------------------GGCTCTGTAGGGTTTCCCCAATTAACAGGCA-AACTATGTAATTTGTA----AG-TTTTCCCAGCATGTATCCCTCTTATCAAGTGTCATTCTTGGAGCTCTGCAGGCGACACG
dm3 chr3R:26214050-26214435 - CATTCAAAT------------------ATGGCCGCTGC--CAGTGCTGTTGT---TGCTGCG-CCTG---CTGGAAGGTGACTCACG------------------------ACAGGGTTGTCAGCGTGTGCAAAATATGGACGCTGCACTTTG-GA------------------------TTTCAAGTGGTTTCCTGAGAGT-TTTATCAGCTAACGATGA-GAATT------------------------GAAAATAA------------------------------------------ACTGCA-------------------GATAAACCATCTAC------------------------------------------------------------------CTCCTAAGATAATGTTT----------------------------------------------TAAGTTTTGATATATTGGTAATTCACAGCAGCA-------------------------------------------------------------------------------------------------T-CGAG-CTTGAGACTGTTGCTATT---TAC----------AATACATATTATTGCTGGGTTCGGA---------------------------------------------------------GATAATGTAGGGTTTCCCCAATCAACAAACA-AATTATGTAATTTGTA----AG-TTTTCCCACCATGTATCCTTCTTATCAAGTGTCATTCTTGGAGCTCTGCAAGCGACACG
droEre2 scaffold_4820:1793594-1793999 + CATTCAAAC------------------ATGGCCGCTTG--CAGTGTTGTTGT---TGTTGCTGCCTG---CTGGAAGGTGACTCACG------------------------GCAGGGTTGTCAGCGTGTGCAAAAGATGGACGCTGCACTTTG-GA------------------------TTTCAAGTGGTTTCCTGAAAGT-TTTATCAGCTAACGATAA-AGATT------------------------TTAAATAA------------------------------------------ACTGCA-------------------GATAAACAAGCTAC------------------------------------------------------------------ATTCTATGATAATGTTT----------------------------------------------CTATATGCGAAACAATGACAATTCACAGCAGGATG-------------------------------------------------------------------------TGAGTCAAAAGGCTTACATGTAT-CGAG-TTTCGGACTGCTGCTCTT---TTCTT-TTTTTTCAATAAATAGTATTGA----------------------------------------------------------------------AATGTAGGGTTTCCCCAATCAACAGACC-AATTATGTAATT-GTA----AG-TTTTCCCAGCTTGTATGCCCCTTATCAAGTGTCACTCCTGGAGCTCTGCAATCGACACG
droYak3 3R:27138800-27139181 - CATTCAAAC------------------ATGGCCGCTCG--CAGTGTTGTTGT---TGCTG---CCTG---CTGGAAGGTGACTCACG------------------------ACAGGGTTGTCATCGTGTGCAAAAGATGGACGCTGCACTTTG-GA------------------------TTTCAAGAGGTTTCCTGAGAGT-TTTATCAGTAAACAATGA-AGATT------------------------CGAAATAA------------------------------------------ACTGCA-------------------GATAAACAAGCTAC------------------------------------------------------------------ATCCTAAGATAATGTTT----------------------------------------------TTATATGCGAAACAATGGCAATTTACTGCAGTATG-----------------------------------------------------------------------------------TAATGAAATATAT-CAAA-TTTTAGACTTTAGCTATT---AACATAATTTTTCAATATG---TATTGCAATGCTCGGA---------------------------------------------------------AATAGTGTTGGGTTTCTCCAATCAACAGACA-AATTATATAATT-GTA----AG-TTTTCCCACTTCGTATTCCCGTTATCAAC----------------------ACGACACG
droEug1 scf7180000409555:716673-716891 - CATTCAAAC------------------ATGGCCGCGGTG---GTGTTGTTTT---TGTTG---CCTT---CTGGATAGTGACTCACG------------------------GCAGGGTTGTCAGCGTGTGCAAAAGGTGGACACTGCACTTTG-GA------------------------TTTCAAGTGGCTTCTTGAAAATATTTATAAGAAA--GTTGA-G-ATT------------------------------TA------------------------------------------TTGGTT-------------------AACATTTGATATGA------------------------------------------------------------------TTTAAAAGATGTA---TTAC-------------------------------------------TTAGATATATTATAAT----ATATACAGAATTAAT-----------------------------------------------------------------------------------AGCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302113:1159346-1159525 + CACTCAAAC------------------ATGGCCGCTCCG-CCGTGTTGCTGT---TGTTG---CCCC---CTGGAAGGTGACTCACG------------------------GCAGGGTTGTCACCGTGTGCAAAAAATGGACACTGCAGTTCG-G-------------------------TTTCAAGTGGTTT-TTGAGAGT-TTTATCAA-----GAAGG-GAATT-GAT-----------------------------------------------------------------GTTTCGCA---AAA----------------GATAGGTCATAAAC------------------------------------------------------------------AAACTAGAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415765:687799-688294 - CATTCAAAC------------------ATGGCCGCTCTG-CTGGGTTGTTTT---TGTTG---CCCC---CTGGAAGGTGACTCACG------------------------GCAGGGTTGTCAGCGTGTGCAAAAGATGGATACTGCACTTTG-GA------------------------TCTCAAGTGGTGCCTCGAGGGT-CTTATCAGGTGGCGAAGGGGGATTTGAT-----------------------------------------------------------------GTTTCATA---GAAAAATTGT---------GATAAATAAATTACTTATTTTATTGTTTTTAACGAGATTTTAAAACTAATGGTGTATTTCAACCCAATACATTACTTTGAA-----------------------TGATTT----------------------------------TAA------------------------------ATCTAACAGTCCCAACGATATGTAAC--------------------TTTTAAATAA---TTATTTTTTTAGCTTTCGAATAATATTGTTTCTTATACACCACTTTCAAA---------TT-TATTC--T--------AAT----------------------------TATGAAAACTGTG----------------------TCAAAATAATTATGCT-ATACTATAGGGTTTCCCCAGTCAA-AGGCAGCGTGATGTAACGA-AATTA-TA-TTTTCCCAGCATTTATCCCCCTTATCAAGTGTCACTCTGTGGGCTCTGCAAACGACACC
droEle1 scf7180000491280:2522085-2522262 - CATTCCATCT----TGGAAACGGCAATATGGCCGCTAGA---GTGTTGTTCT---TGTAG---CCGA---CTGGAGAGTGACTCACA------------------------GCAGGGTTGCCAACGTGTGCAAAAAATGGACACTGCACTTTG-CT----TCTTTGTATGGTTGC--AGTTTTTAAGTGGTTTCTTGAGATC-TTTATCAGTATGAAACGA-AGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000780069:64926-65081 - CATTCCAAC------------------ATGGCCGCTTTA---GTGTTGTTTT---TGTGT---CCTC---CTGGAGAGTGACTCACG------------------------GCAGGGTTGTCAACGTGTGCAAAAAATGGACACTGCACTTTG-CT----TCTTTGTATGCCT-T--GGTTCTCAAGTGGTTTCTTGAGATT-TTTATCAGCAAAAGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454106:260430-260879 + CATTCAAAC------------------ATGGCCGCTTCG-TGGTGTTGTTTT---TGTTG---CCTT---CTGGAAAGTGAGTCACG------------------------GCAGGGTTGTCAGCGTGTGCAAAACATGGGCACTGCACTTTG-GG-------------------------CTCAAGAGGTTTCTTCAGATT-TTTATCGGTCAAAGAGGG-AGATTTGGT-----------------------------------------------------------------ACTTTATT---GATAATTGGTTGAATAAATGTTAATTAAA-----------------------------------------------------------CTTTATTTTGAA-------------------------------------------------------------------------------------TACGGCGGTGAA----AACATTTATGTGTTAT----------------GTGTCCTATT----CAATTT------CATTTTTGTTGTGATTCAATCTGTTTGCATGTACATGAT-TATTGGACT-------------------------------------------GTTCAGAACTAGCTCTGATATTTATGTTAAATTTAAAAACAATTTAATTCTGCATGAGTCTGCTAATAATATAGGGTTTTTCTAAGC---------TGTTATGTAAC---------AG-TTTTCCCAGCATAC-TCCCCCTTATCAAGTGTCATGTCTAGGGCCCTGCAACCGACACC
droKik1 scf7180000302390:156443-156929 - CATTCAAACA----TGGCTCTGGCAATATGGCCGCTGTG---GTGTTGTTTT---TGTAG---CCTCCAGTGGGAGAGTGACTCACA------------------------ACAGGGTTGCCAACGAGTGCAAAAAATGGCCACTGGACTCTG-AAATGCACTTTGTGG--GTGCGTGTGTTTCAAG-GGTTTTTTAAGATA-ACTATCAGCTGAAGTGGGCGGATATGATTGTTTTTATTGCTTAATATTAATAATACTTTGCTAAAAATAATTGGTTATTTGGATGTGCACAATAT---TCTGCA-------------------AAAGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCAAGAAATTTTTCCGATTTGCAGTTTGGGAGTTTGGTGACCAGTTTTT-AGACT---TTACTATTTTAATCATAATATAAACTTGTAACAAATACATAAATTCCAAG---------ATTTATAACAT--------AATTT------------------------------------------------------------------------------ATATGGTTCGATTTCACCAAATCATACAAC-TGTTATGTAATTG-CA---TAGTTCATTCCAGCGTTTATCCCCCTTATCAAGTGTCATTTTTA-----------GTGACACC
droAna3 scaffold_13340:21241094-21241429 - CA-----AT------------------ATGGCCGCTATG---GCCGCGTTAC---TGGGG---CTCC----CATGTTGTGAGTCACAT-----------------------GCAGGGTTGTCAACGTGTGCAA--CATGGCCACTGGACTATG-GA-TGCACTTTGTAT--CT----GCGTTTCAAGGGGACATCTGAGATT-ATTATCAGCTAATATGG--GTCTT------------------------GA---------------------------------------------------------------------------------------------------------------------------------------------------------A-TACAAAACGTA---TTATTGAAAGACTTATTAAT-TGTATGATATCTCTAAGAAAACGCTCTGAGAATC----------------------------------------------------------------CATCTTATG----TAACCTTATCATTATTTTAA--------------------------GGAAATTCCATG---------ATAGTTAACA-----------------------------------------------------------------------------------------------------------------------------------------C---ATAG--TTGCCCAGCATTGGTGGCCCTTATCAAGTGTCATTCA-AGCTTAGAGTGTGTGACACC
droBip1 scf7180000396413:1211585-1211924 + TGGGGCAAT------------------ATGGCCGCTATG---GCCGCCTTAC---TGGGG----CTC---CCATATTGTGAGTCACGT-----------------------GCAGGGTTGTCAACGTGTGCAA--CATGGTCATTGGACTGTG-GA-TGCACTTTGTAT--CT----GCGTTTCAAGGGGATTACTGAGATT-GATATCTCTTAATA-TGA-GTTTT------------------------GA---------------------------------------------------------------------------------------------------------------------------------------------------------A-TACAAAA-GTA---TTGACTATAAACGTATTAACGTATACCATATT-TTAAGGAAACCCTCAGAGAATC----------------------------------------------------------------CATCTTATG----CAACCTTATCACTATTTTAA--------------------------GGAAATTCCATG---------ATAGTTAACA-----------------------------------------------------------------------------------------------------------------------------------------C---ATAG---TTTCCATCATTAGTCTCCCTTATCAAGTGTCATTTGTAGCTTATAATGAGTGGCACC
dp5 2:1302456-1302637 + CAGTCAAATATGTATGGTTCAGCCAATATGGCCGCTCCG---CTGTGGTTGC---TGTTG---TTTT----TTCCATGTGACTCATGTGTTCTCTCGCACTGGAGCGTTAGTCAGGGTTGTCAGCGTGTGCAAAC--------------TTGGTGG------------------------TTTCAAGTGGCG----TAGATC-TTTATCAACTAGTAGGGACGGACT------------------------TAAGCCAA------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_7:4103072-4103253 + CAGTCAAATATGTATGGTTCAGGCAATATGGCCGCTCCG---CTGTGGTTGC---TGTTG---TTTT----TTCCATGTGACTCATGTGTTCTCTCGCACTGGAGCGTTAGTCAGGGTTGTCAGCGTGTGCAAAC--------------TTGGTGG------------------------TTTCAAGTG----CCGTAGATC-TTTATCAACTAGTAGGGACGGACT------------------------TAAGCCAA------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004943:9710566-9710573 - CAGTTAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12855:3329176-3329235 - CAGTCAAAAA----TGGCTCTGGCAATATGGCCGCGTCT---CTGTTGTTGTTGTTGTTGCC-ATTG---C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:9859292-9859341 + CAGTCAAACA----TGGCTCAGGCAATATGGCCGCGTCT---CTGTTGTTGT---TGTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:6019661-6019720 - CAGTCAAACA----TGGCTCGGGCAATATGGCCGCGTTTCTCTTGTTGGTGT---TGTTGCT-TTTG---C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CATTCAAAC------------------ATGGCCGCTGC--CAGTGTTGTTGT---TGCTGCG-CCTG---CTGGAAGGTGACTCACG------------------------GCAGGGTTGTCAGCGTGTGCAAAAGATGGACGCTGCACTTTG-GA------------------------TTTCAAGTGGTTTCCTGAGATT-TGTATCAGCTAACGATGA-GGATT------------------------GAAATTAA------------------------------------------TCTGCA-------------------GATAAGCGATCTAC------------------------------------------------------------------ATCCTAAGAAATTGTTC----------------------------------------------TTAGTATTGATATAATGGCAATTCACAGCAGCAAA-----------------------------------------------------------------------------------GGCTTACATGTAT-CGAG-CTTGAGACTGCTGCTATT---AAC----------AATTCATATTTTCGCTATGTTCGGA---------------------------------------------------------GTTTCTGTAGAGTTTCCCCAATTAACAGGCA-AATTATGTAATTTGTA----AG-TTTTCCCAGCATGTATCCCTCTTATCAAGTGTCATTCTTGGAGCTCTGCAGGCGACACGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................GTCAGCGTGTGCAAAAGATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000000000000000
.............................................................................................................................................CGCTGCACTTTG-GA------------------------TTTCAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000002000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCTCTGCAGGCGACACG2111.00100000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTCATTCTTGGAGCTCTG...........2111.00100000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-CTTGAGACTGCTGCTATT---A................................................................................................................................................................................................................2111.00100000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGTA----AG-TTTTCCCAGCAA...............................................2211.00100000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAGCTCTGCAGGCGACA..2011.00100000000000001000
......................................................................................................................................................TTG-GA------------------------TTTCAAGTGGTTTCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA----AG-TTTTCCCAGCATGTAT...........................................2011.00100000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-CTTGAGACTGCTGCTATT---.................................................................................................................................................................................................................2011.00100000000000001000
............................................GTTGTTGT---TGCTGCG-CCTG---..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGAGCTCTGCAGGCGTAT..2140.25100000000000001000
droSec2
CATTCAAAC------------------ATGGCCGCTGC--CAGTGTTGTTGT---TGCTGCG-CCTG---CTGGAAGGTGACTCACG------------------------GCAGGGTTGTCAGCGTGTGCAAAAGATGGACGCTGCACTTTG-TA------------------------TTTCAAGTGGTTTCCTGAGATT-TTTATCAGCAAACGATGA-GGATT------------------------AAAATTAA------------------------------------------TCTGCA-------------------GATAAACGATCTAC------------------------------------------------------------------ATCCTAAGAAATTGTTT-----------------------------------------------TAGTTTTGATATAATGGCAATTCACAGCAGCAAA-----------------------------------------------------------------------------------GGCTTACATGTGT-CGAG-CTTGAGACTGCTGCTATT---AAA----------GATAGTTATTTTCGCTATGTTCGGA---------------------------------------------------------GGCTCTGTAGGGTTTCCCCAATTAACAGGCA-AACTATGTAATTTGTA----AG-TTTTCCCAGCATGTATCCCTCTTATCAAGTGTCATTCTTGGAGCTCTGCAGGCGACACGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................CACG------------------------GCAGGGTTGTCAGCGTGTGCAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
dm3
CATTCAAAT------------------ATGGCCGCTGC--CAGTGCTGTTGT---TGCTGCG-CCTG---CTGGAAGGTGACTCACG------------------------ACAGGGTTGTCAGCGTGTGCAAAATATGGACGCTGCACTTTG-GA------------------------TTTCAAGTGGTTTCCTGAGAGT-TTTATCAGCTAACGATGA-GAATT------------------------GAAAATAA------------------------------------------ACTGCA-------------------GATAAACCATCTAC------------------------------------------------------------------CTCCTAAGATAATGTTT----------------------------------------------TAAGTTTTGATATATTGGTAATTCACAGCAGCA-------------------------------------------------------------------------------------------------T-CGAG-CTTGAGACTGTTGCTATT---TAC----------AATACATATTATTGCTGGGTTCGGA---------------------------------------------------------GATAATGTAGGGTTTCCCCAATCAACAAACA-AATTATGTAATTTGTA----AG-TTTTCCCACCATGTATCCTTCTTATCAAGTGTCATTCTTGGAGCTCTGCAAGCGACACGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................GC--CAGTGCTGTTGT---TGCTGCG-CCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24115.001500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015
...................................................T---TGCTGCG-CCTG---CTGGAAGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
........................................................................................................................TCAGCGTGTGCAAAATATGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTAATTCACAGCAGCA-------------------------------------------------------------------------------------------------T-C..........................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCATGTATCCTTCTTATCAAG..............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TATGGACGCTGCACTTTG-GA------------------------TTTCAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GCTGTTGT---TGCTGCG-CCTG---..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1931.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000000000000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TT----------------------------------------------TAAGTTTTGATATATTGGT............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................CTGTTGT---TGCTGCG-CCTG---C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCA-------------------------------------------------------------------------------------------------T-CGAG-CTTGAGACT.............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TG---CTGGAAGGTGACTCACG------------------------AC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA-------------------------------------------------------------------------------------------------T-CGAG-CTTGAGACTGTTG.........................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................ATATGGACGCTGCACTTTG-G.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GCTGTTGT---TGCTGCG-CCTG---C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGTCATTCTTGGAGCTCTGCAAGC......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CCTG---CTGGAAGGTGACTCACG------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGGAGCTCTGCAAG.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................ATGGACGCTGCACTTTG-GA------------------------TT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CG------------------------ACAGGGTTGTCAGCGTGTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
....................................................................................................................................AAATATGGACGCTGCACTTTG-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................TTG-GA------------------------TTTCAAGTGGTTTCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................CACG------------------------ACAGGGTTGTCAGCGTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGGA---------------------------------------------------------GATAATGTAGGGTTTCCCC...............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................GGGTTGTCAGCGTGTGCAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TCAAGTGGTTTCCTGAGAGT-TTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA-------------------------------------------------------------------------------------------------T-CGAG-CTTGAGACTGTTG.........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGACTGTTGCTATT---TAC----------A...................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTAATTCACAGCAGCA-------------------------------------------------------------------------------------------------T-CG.........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................TGCTGTTGT---TGCTGCG-CCTG---C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................CTGTTGT---TGCTGCG-CCTG---..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGTAGGGTTTCCAA...............................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................GCTGTTGT---TGCTGCG-CCTC---..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
droEre2
CATTCAAAC------------------ATGGCCGCTTG--CAGTGTTGTTGT---TGTTGCTGCCTG---CTGGAAGGTGACTCACG------------------------GCAGGGTTGTCAGCGTGTGCAAAAGATGGACGCTGCACTTTG-GA------------------------TTTCAAGTGGTTTCCTGAAAGT-TTTATCAGCTAACGATAA-AGATT------------------------TTAAATAA------------------------------------------ACTGCA-------------------GATAAACAAGCTAC------------------------------------------------------------------ATTCTATGATAATGTTT----------------------------------------------CTATATGCGAAACAATGACAATTCACAGCAGGATG-------------------------------------------------------------------------TGAGTCAAAAGGCTTACATGTAT-CGAG-TTTCGGACTGCTGCTCTT---TTCTT-TTTTTTCAATAAATAGTATTGA----------------------------------------------------------------------AATGTAGGGTTTCCCCAATCAACAGACC-AATTATGTAATT-GTA----AG-TTTTCCCAGCTTGTATGCCCCTTATCAAGTGTCACTCCTGGAGCTCTGCAATCGACACGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................GTTGTTGT---TGTTGCTGCCTG---CT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
droYak3
CATTCAAAC------------------ATGGCCGCTCG--CAGTGTTGTTGT---TGCTG---CCTG---CTGGAAGGTGACTCACG------------------------ACAGGGTTGTCATCGTGTGCAAAAGATGGACGCTGCACTTTG-GA------------------------TTTCAAGAGGTTTCCTGAGAGT-TTTATCAGTAAACAATGA-AGATT------------------------CGAAATAA------------------------------------------ACTGCA-------------------GATAAACAAGCTAC------------------------------------------------------------------ATCCTAAGATAATGTTT----------------------------------------------TTATATGCGAAACAATGGCAATTTACTGCAGTATG-----------------------------------------------------------------------------------TAATGAAATATAT-CAAA-TTTTAGACTTTAGCTATT---AACATAATTTTTCAATATG---TATTGCAATGCTCGGA---------------------------------------------------------AATAGTGTTGGGTTTCTCCAATCAACAGACA-AATTATATAATT-GTA----AG-TTTTCCCACTTCGTATTCCCGTTATCAAC----------------------ACGACACGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
CATTCAAAC------------------ATGGCCGCGGTG---GTGTTGTTTT---TGTTG---CCTT---CTGGATAGTGACTCACG------------------------GCAGGGTTGTCAGCGTGTGCAAAAGGTGGACACTGCACTTTG-GA------------------------TTTCAAGTGGCTTCTTGAAAATATTTATAAGAAA--GTTGA-G-ATT------------------------------TA------------------------------------------TTGGTT-------------------AACATTTGATATGA------------------------------------------------------------------TTTAAAAGATGTA---TTAC-------------------------------------------TTAGATATATTATAAT----ATATACAGAATTAAT-----------------------------------------------------------------------------------AGCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CACTCAAAC------------------ATGGCCGCTCCG-CCGTGTTGCTGT---TGTTG---CCCC---CTGGAAGGTGACTCACG------------------------GCAGGGTTGTCACCGTGTGCAAAAAATGGACACTGCAGTTCG-G-------------------------TTTCAAGTGGTTT-TTGAGAGT-TTTATCAA-----GAAGG-GAATT-GAT-----------------------------------------------------------------GTTTCGCA---AAA----------------GATAGGTCATAAAC------------------------------------------------------------------AAACTAGAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CATTCAAAC------------------ATGGCCGCTCTG-CTGGGTTGTTTT---TGTTG---CCCC---CTGGAAGGTGACTCACG------------------------GCAGGGTTGTCAGCGTGTGCAAAAGATGGATACTGCACTTTG-GA------------------------TCTCAAGTGGTGCCTCGAGGGT-CTTATCAGGTGGCGAAGGGGGATTTGAT-----------------------------------------------------------------GTTTCATA---GAAAAATTGT---------GATAAATAAATTACTTATTTTATTGTTTTTAACGAGATTTTAAAACTAATGGTGTATTTCAACCCAATACATTACTTTGAA-----------------------TGATTT----------------------------------TAA------------------------------ATCTAACAGTCCCAACGATATGTAAC--------------------TTTTAAATAA---TTATTTTTTTAGCTTTCGAATAATATTGTTTCTTATACACCACTTTCAAA---------TT-TATTC--T--------AAT----------------------------TATGAAAACTGTG----------------------TCAAAATAATTATGCT-ATACTATAGGGTTTCCCCAGTCAA-AGGCAGCGTGATGTAACGA-AATTA-TA-TTTTCCCAGCATTTATCCCCCTTATCAAGTGTCACTCTGTGGGCTCTGCAAACGACACCSizeHit CountTotal NormTotal
No Reads
droEle1
CATTCCATCT----TGGAAACGGCAATATGGCCGCTAGA---GTGTTGTTCT---TGTAG---CCGA---CTGGAGAGTGACTCACA------------------------GCAGGGTTGCCAACGTGTGCAAAAAATGGACACTGCACTTTG-CT----TCTTTGTATGGTTGC--AGTTTTTAAGTGGTTTCTTGAGATC-TTTATCAGTATGAAACGA-AGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CATTCCAAC------------------ATGGCCGCTTTA---GTGTTGTTTT---TGTGT---CCTC---CTGGAGAGTGACTCACG------------------------GCAGGGTTGTCAACGTGTGCAAAAAATGGACACTGCACTTTG-CT----TCTTTGTATGCCT-T--GGTTCTCAAGTGGTTTCTTGAGATT-TTTATCAGCAAAAGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CATTCAAAC------------------ATGGCCGCTTCG-TGGTGTTGTTTT---TGTTG---CCTT---CTGGAAAGTGAGTCACG------------------------GCAGGGTTGTCAGCGTGTGCAAAACATGGGCACTGCACTTTG-GG-------------------------CTCAAGAGGTTTCTTCAGATT-TTTATCGGTCAAAGAGGG-AGATTTGGT-----------------------------------------------------------------ACTTTATT---GATAATTGGTTGAATAAATGTTAATTAAA-----------------------------------------------------------CTTTATTTTGAA-------------------------------------------------------------------------------------TACGGCGGTGAA----AACATTTATGTGTTAT----------------GTGTCCTATT----CAATTT------CATTTTTGTTGTGATTCAATCTGTTTGCATGTACATGAT-TATTGGACT-------------------------------------------GTTCAGAACTAGCTCTGATATTTATGTTAAATTTAAAAACAATTTAATTCTGCATGAGTCTGCTAATAATATAGGGTTTTTCTAAGC---------TGTTATGTAAC---------AG-TTTTCCCAGCATAC-TCCCCCTTATCAAGTGTCATGTCTAGGGCCCTGCAACCGACACCSizeHit CountTotal NormTotal
No Reads
droKik1
CATTCAAACA----TGGCTCTGGCAATATGGCCGCTGTG---GTGTTGTTTT---TGTAG---CCTCCAGTGGGAGAGTGACTCACA------------------------ACAGGGTTGCCAACGAGTGCAAAAAATGGCCACTGGACTCTG-AAATGCACTTTGTGG--GTGCGTGTGTTTCAAG-GGTTTTTTAAGATA-ACTATCAGCTGAAGTGGGCGGATATGATTGTTTTTATTGCTTAATATTAATAATACTTTGCTAAAAATAATTGGTTATTTGGATGTGCACAATAT---TCTGCA-------------------AAAGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCAAGAAATTTTTCCGATTTGCAGTTTGGGAGTTTGGTGACCAGTTTTT-AGACT---TTACTATTTTAATCATAATATAAACTTGTAACAAATACATAAATTCCAAG---------ATTTATAACAT--------AATTT------------------------------------------------------------------------------ATATGGTTCGATTTCACCAAATCATACAAC-TGTTATGTAATTG-CA---TAGTTCATTCCAGCGTTTATCCCCCTTATCAAGTGTCATTTTTA-----------GTGACACCSizeHit CountTotal NormTotal
No Reads
droAna3
CA-----AT------------------ATGGCCGCTATG---GCCGCGTTAC---TGGGG---CTCC----CATGTTGTGAGTCACAT-----------------------GCAGGGTTGTCAACGTGTGCAA--CATGGCCACTGGACTATG-GA-TGCACTTTGTAT--CT----GCGTTTCAAGGGGACATCTGAGATT-ATTATCAGCTAATATGG--GTCTT------------------------GA---------------------------------------------------------------------------------------------------------------------------------------------------------A-TACAAAACGTA---TTATTGAAAGACTTATTAAT-TGTATGATATCTCTAAGAAAACGCTCTGAGAATC----------------------------------------------------------------CATCTTATG----TAACCTTATCATTATTTTAA--------------------------GGAAATTCCATG---------ATAGTTAACA-----------------------------------------------------------------------------------------------------------------------------------------C---ATAG--TTGCCCAGCATTGGTGGCCCTTATCAAGTGTCATTCA-AGCTTAGAGTGTGTGACACCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TGGGGCAAT------------------ATGGCCGCTATG---GCCGCCTTAC---TGGGG----CTC---CCATATTGTGAGTCACGT-----------------------GCAGGGTTGTCAACGTGTGCAA--CATGGTCATTGGACTGTG-GA-TGCACTTTGTAT--CT----GCGTTTCAAGGGGATTACTGAGATT-GATATCTCTTAATA-TGA-GTTTT------------------------GA---------------------------------------------------------------------------------------------------------------------------------------------------------A-TACAAAA-GTA---TTGACTATAAACGTATTAACGTATACCATATT-TTAAGGAAACCCTCAGAGAATC----------------------------------------------------------------CATCTTATG----CAACCTTATCACTATTTTAA--------------------------GGAAATTCCATG---------ATAGTTAACA-----------------------------------------------------------------------------------------------------------------------------------------C---ATAG---TTTCCATCATTAGTCTCCCTTATCAAGTGTCATTTGTAGCTTATAATGAGTGGCACCSizeHit CountTotal NormTotal
No Reads
dp5
CAGTCAAATATGTATGGTTCAGCCAATATGGCCGCTCCG---CTGTGGTTGC---TGTTG---TTTT----TTCCATGTGACTCATGTGTTCTCTCGCACTGGAGCGTTAGTCAGGGTTGTCAGCGTGTGCAAAC--------------TTGGTGG------------------------TTTCAAGTGGCG----TAGATC-TTTATCAACTAGTAGGGACGGACT------------------------TAAGCCAA------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................TTGTCAGCGTGTGCAAAC--------------T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.............................................................................................................................................................................................GCG----TAGATC-TTTATCAACTAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
....................................................................................ATGTGTTCTCTCGCACTGGAGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..........................TATGGCCGCTCCG---CTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
droPer2
CAGTCAAATATGTATGGTTCAGGCAATATGGCCGCTCCG---CTGTGGTTGC---TGTTG---TTTT----TTCCATGTGACTCATGTGTTCTCTCGCACTGGAGCGTTAGTCAGGGTTGTCAGCGTGTGCAAAC--------------TTGGTGG------------------------TTTCAAGTG----CCGTAGATC-TTTATCAACTAGTAGGGACGGACT------------------------TAAGCCAA------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
CAGTTAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
CAGTCAAAAA----TGGCTCTGGCAATATGGCCGCGTCT---CTGTTGTTGTTGTTGTTGCC-ATTG---C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
CAGTCAAACA----TGGCTCAGGCAATATGGCCGCGTCT---CTGTTGTTGT---TGTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CAGTCAAACA----TGGCTCGGGCAATATGGCCGCGTTTCTCTTGTTGGTGT---TGTTGCT-TTTG---C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 08:46 AM