ID:

dsi_3841

 Coordinate:

4:108487-108789 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-51.1 -50.9 -50.9

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GGCAGATCGAACTGCTCTTCAATGATGTTACAAATTTTGTTCGCTTGTTTGCTATGTTGTTTAAGAGAGACCTTTTACAAAGATGACAGGTGTAGCTGACATTAAAATTGGCATAATTGCATAAGTCTTAGAACCAAGAAGTATATTCAAACTGTCGCAGAATTCATAATTGCCTGCACTTGTAATTTTAAATTGTCCAGAAATGTTCGCAAGTCAGAGCAAGGCTTGTGAGATTAATAATTCTCGAAGTGAGACAGTGCAGCTACAACCCTTACCAAATCATATTGAAGATCTAAAATTTAGAAATTCGGACGTTGAAACGGATGATGATCATCACTTCCCTGGAATTGCAGCTAAAAATAAAATCTTGAAGCTTAGCTGGTGGCATTCTCCTGTTGATATG
***************************************************************************.............((((((((((............(((....)))(((..((((......))))..)))......((((((.((..........(((((((.(((((((((..................))).))))))))).))))..(((.(((((........)))))))))).)))))).))))))).)))....((...(((..(((((..(((((...)))))..)))))....)))...)).******************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR902008
ovaries
 M053
female body
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 M023
head
 GSM343915
embryo
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 O002
Head
..........................................................................................................................................................................................................................................................................................................TTTAGAAATTCGGACGTTGAAACGGA............................................................................... 26 0 1 11.00 11 8 1 0 1 0 1 0 0 0 0 0 0 0 0
...........................................................................TACAAAGATGACAGGTGTAGCTGACA.............................................................................................................................................................................................................................................................................................................. 26 0 1 7.00 7 0 6 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................TTTACAAAGATGACAGGTGTAGCTGACA.............................................................................................................................................................................................................................................................................................................. 28 0 1 6.00 6 0 3 2 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................TAGAAATTCGGACGTTGAAACGGA............................................................................... 24 0 1 5.00 5 2 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TGTCCAGAAATGTTCGCAAGTCAGAGCA...................................................................................................................................................................................... 28 0 1 5.00 5 1 3 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TTCAAACTGTCGCAGAATTCATAAT......................................................................................................................................................................................................................................... 25 0 1 5.00 5 1 2 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TGTCCAGAAATGTTCGCAAGTCAGA......................................................................................................................................................................................... 25 0 1 5.00 5 0 4 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................CATATTGAAGATCTAAAATTTAGAAAT................................................................................................ 27 0 1 4.00 4 0 1 3 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................TCGGACGTTGAAACGGATGATGATCAT..................................................................... 27 0 1 4.00 4 1 2 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................TTTAGAAATTCGGACGTTGAAACGGAA.............................................................................. 27 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................TCGGACGTTGAAACGGATGATGATCATC.................................................................... 28 0 1 4.00 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................TACAACCCTTACCAAATCATATTGAAGA................................................................................................................ 28 0 1 4.00 4 1 1 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TTGTGAGATTAATAATTCTCGAAGTGA....................................................................................................................................................... 27 0 1 4.00 4 0 3 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................TCTAAAATTTAGAAATTCGGACGTTGA..................................................................................... 27 0 1 4.00 4 2 0 0 0 0 2 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................TAAAATTTAGAAATTCGGACGTTGA..................................................................................... 25 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................TCTAAAATTTAGAAATTCGGACGT........................................................................................ 24 0 1 3.00 3 0 0 1 0 0 2 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................GTCAGAGCAAGGCTTGTGA............................................................................................................................................................................ 19 0 1 3.00 3 0 0 0 0 2 0 0 1 0 0 0 0 0 0
..........................................................................TTACAAAGATGACAGGTGTAGCTGACA.............................................................................................................................................................................................................................................................................................................. 27 0 1 3.00 3 0 2 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................ATTCGGACGTTGAAACGGAT.............................................................................. 20 0 1 3.00 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0
..................................................................................................................................................................................................................................................CTCGAAGTGAGACAGTGCAGCTACAA....................................................................................................................................... 26 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TTGTCCAGAAATGTTCGCAAGTCAGA......................................................................................................................................................................................... 26 0 1 3.00 3 0 0 0 2 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................TTAGAAATTCGGACGTTGAAACGGA............................................................................... 25 0 1 3.00 3 0 1 0 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................TTAGAAATTCGGACGTTGAAACGGAA.............................................................................. 26 1 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................TGAGACAGTGCAGCTACAACCCTTACCAA............................................................................................................................. 29 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TGTTCGCTTGTTTGCTATGTTGTT...................................................................................................................................................................................................................................................................................................................................................... 24 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................TTGAAGCTTAGCTGGTGGCATTCTCC.......... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................TACCAAATCATATTGAAGATCTAAAAT........................................................................................................ 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................GACGTTGAAACGGATGATGATCATCAC.................................................................. 27 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................TTACCAAATCATATTGAAGATCTAAAAT........................................................................................................ 28 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................TAAAATTTAGAAATTCGGACGTTGAAA................................................................................... 27 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................TCATATTGAAGATCTAAAATTTAGAAAT................................................................................................ 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................ATCTAAAATTTAGAAATTCGGACGT........................................................................................ 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................ATTTAGAAATTCGGACGTTGAAACGGAA.............................................................................. 28 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................TCTCGAAGTGAGACAGTGCAGCTACA........................................................................................................................................ 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................TATTGAAGATCTAAAATTTAGAAATT............................................................................................... 26 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................TCGGACGTTGAAACGGATGATGATCA...................................................................... 26 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TGGCATAATTGCATAAGTCTTAGAACCAA.......................................................................................................................................................................................................................................................................... 29 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TATTCAAACTGTCGCAGAATTCATAAT......................................................................................................................................................................................................................................... 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................CCAAATCATATTGAAGATCTAAAATT....................................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................TTCCCTGGAATTGCAGCTAAAAAA.......................................... 24 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TGTCCAGAAATGTTCGCAAGT............................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................AACTGTCGCAGAATTCATAATTGCC..................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TGACAGGTGTAGCTGACATT............................................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................................................................................ATATTGAAGATCTAAAATTTAGAAAT................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................AATTGCATAAGTCTTAGAACC............................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................GCATAAGTCTTAGAACCAAGAAGTAT................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TGACATTAAAATTGGCATAATTGC........................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................TACAACCCTTACCAAATCATATTGAA.................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................GATCATCACTTCCCTGGAATTGCAGCT................................................ 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................TTCTCGAAGTGAGACAGTGCAGC............................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................TCATATTGAAGATCTAAAATTTAGAAA................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................GACGTTGAAACGGATGATGATCATCACT................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................AGCTGACATTAAAATTGGC................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................AAGTATATTCAAACTGTCGCAGAATTCAA............................................................................................................................................................................................................................................ 29 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................TGAGACAGTGCAGCTACAACCCTTA................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................TCGGACGTTGAAACGGATGATGAT........................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................TGAAGCTTAGCTGGTGGCATTCTCC.......... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................TCGGACGTTGAAACGGATGATGATC....................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................ATTCGGACGTTGAAACGGA............................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................TACCAAATCATATTGAAGATCTAAAATT....................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................GTCAGAGCCAGGCTTGTG............................................................................................................................................................................. 18 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............TCTTCAATGATGTTACAAATTTTGTT.......................................................................................................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................TAGAAATTCGGACGTTGAAACGGAA.............................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................TCGAAGTGAGACAGTGCAGCTACAACC..................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................................TAAAATCTTGAAGCTTAGCTGGTGGCA................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................TTGAAACGGATGATGATCATCACTT................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................TACAACCCTTACCAAATCATA....................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................TGAAGATCTAAAATTTAGAAATTCGGAC.......................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................GTAGCTGACATTAAAATTGGC................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................GACAGTGCAGCTACAACCCTTAC................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................ACAGTGCAGCTACAACCCTTA................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................TGCAGCTACAACCCTTACCAAAT........................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................TCGAAGTGAGACAGTGCAGCTACAACCC.................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TATTCAAACTGTCGCAGAATTCATA........................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................AGTGCAGCTACAACCCTTACCAAATCATAA...................................................................................................................... 30 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................GATCTAAAATTTAGAAATTCGGACGT........................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................TGCTATGTTGTTTAAGAGAGA............................................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................TATGTTGTTTAAGAGAGACCTTTTACA.................................................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TTCAAACTGTCGCAGAATTCATAATTGC...................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................TCCCTGGAATTGCAGCT................................................ 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................TGATCATCACTTCCCTGGA......................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................TATTCAAACTGTCGCAGAATTCATAA.......................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................TGCAGCTACAACCCTTACCAAATCAA........................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................TTCGGACGTTGAAACGGATGATGAT........................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................TAGAAATTCGGACGTTGAAAC.................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TATATTCAAACTGTCGCAGAATTCATA........................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................TTTACAAAGATGACAGGTGT...................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................................................................................................................TTCTCGAAGTGAGACAGTGCAGCTACAACC..................................................................................................................................... 30 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................AGTGAGACAGTGCAGCTACAACCCT................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................CGTTGAAACGGATGATGAC........................................................................ 19 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................AATTGCATAAGTCTTAGAACCAAGAAG...................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................TACAACCCTTACCAAATCATATTGAAGATC.............................................................................................................. 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................AAAATTTAGAAATTCGGACGTTGAAAC.................................................................................. 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................CTCGAAGTGAGACAGTGCAGCTACAACCC.................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................CTCGAAGTGAGACAGTGCAGCTACAAC...................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................TAAAATTTAGAAATTCTGATGTTGA..................................................................................... 25 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................................................................TCTCGAAGTGAGACAGTGCAGCTACAAC...................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................TAGAAATTCGGACGTTGAAACGGT............................................................................... 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TGTTCGCAAGTCAGAGCAAGGCTGG............................................................................................................................................................................... 25 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................................TTGTCTCGAAGTGAGACAGTGCAGCTAC......................................................................................................................................... 28 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................AAATTTAGAAATTCGGACGTTGAAACGGA............................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................TTGCAGCTAAAAATAAAATCTTGAAGC............................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................ATCTAAAATTTAGAAATTCGGACGTT....................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GTGAGATTAATAATTCTCGAAGTGAGAC.................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................TTTAGAAATTCGGACGTTGAAACGGT............................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................AACCCTTACCAAATCATATTGAAGA................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................TAATTCTCGAAGTGAGACA................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................GAAGATCTAAAATTT...................................................................................................... 15 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................CGGACGTTGAAACGGATGATG.......................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................................................................................................AGTCAGAGCAAGGCTTGTGA............................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................................................................................................................................................TTCCCTGGAATTGCAGCTAAAAATAA........................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................TCTCGAAGTGAGACAGTGCAGCTACAACC..................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................TGCAGCTAGAACACTTACC............................................................................................................................... 19 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................TCGAAGTGAGACAGTGCAGCTACA........................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................TTGAAGCTTAGCTGGTGGCATTCTCCTG........ 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................CGAAGTGAGACAGTGCAGCTACAACCC.................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................ATTCTCGAAGTGAGACAGTGCAGC............................................................................................................................................ 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................TCTCGAAGTGAGACAGAGCAGC............................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................TCTAAAATTTAGAAATTCGGACGTTG...................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TGTGAGATTAATAATTCTCGAAGTGA....................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CGCAGAATTCATAATTGCCT.................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................TCTAAAATTTAGAAATTCGGACGTT....................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGCAAGGCTTGTGAGATT........................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................TACAACCCTTATCAAATCATATTGA................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................AAATCATATTGAAGATCTAAAATT....................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................AGAAATTCGGACGTTGAAACGGAT.............................................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................TAGAAATAAAATCTTGAAGC............................. 20 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................TAAAATTTAGAAATTCGGACGTTG...................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................TCTTGAAGCTTAGCTGGTGGCATTC............. 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................TAGAAATTCGGACGTTGAAACGGATGA............................................................................ 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................ATTCGGACGTTGAAACGGATG............................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................TGCAGCTACAACCCTTACC............................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................TATTCAAACTGTCGCAGA.................................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................................................GACAGTGCAGCTACAACCCTTACCA.............................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................TTCGGACGTTGAAACGGATGATGATCAT..................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................TACAACCCTTACCAAATCATATTGAAGAT............................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TGTCCAGAAATGTTCGCAAGTCAGAGCAA..................................................................................................................................................................................... 29 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................TATTGAAGATCTAAAATTTAGAAAT................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TTCGCTTGTTTGCTATGTTGTTTAAGAGA............................................................................................................................................................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................................................................TGAGACAGTGCAGCTACAACCCTTACCA.............................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................AAACTGTCGCAGAATTCATAATTGCCT.................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................CTAAAATTTAGAAATTCGGACGTTGA..................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................AATAATTCTCGAAGTGA....................................................................................................................................................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................AACCCTTACCAAATCATATTGAAGATC.............................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................TACAAAGATGACAGGTGTAGCTGACATT............................................................................................................................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................................................................ACCCTTACCAAATCATATTGAAGA................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................ATCATATTGAAGATCTAAAATTTAGA................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................CAAAGATGACAGGTGTAGTAA................................................................................................................................................................................................................................................................................................................. 21 3 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................TGATGATCATCACTTCCCTGGAATT...................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TTAGAACCAAGAAGTATATTCAAACT.......................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CAAGGCTTGTGAGATTAATAATTCTC.............................................................................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................TTACAAAGATGACAGGTGTAGC................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................TAGAAATTCGGACGTTGAAACGGAT.............................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................................GAAGCTTAGCTGGTGGCATTC............. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................................................................................................................................................TTGAAACGGATGATGATCATCACTTCC.............................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................AAATTTAGAAATTCGGACGTT....................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................TGATGATCATCACTTCCCTGGAATTGC.................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TTTTACAAAGATGACAGGTGTAGCTGACA.............................................................................................................................................................................................................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CAAACTGTCGCAGAATTCATAATTGCC..................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TAAGTCTTAGAACCAAGAAGTATAT................................................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................TCGAAGTGAGACAGTGCAGCTACAACCCT................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TTAAAATTGGCATAATTGCATAAGTC.................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................TCTTGAAGCTTAGCTGGTGGCATTCTCT.......... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TAAGTCTTAGAACCAAGAAGTATATT................................................................................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................TGAGACAGTGCAGCTACAACCCTTAA................................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................TCGGACGTTGAAACGGATGA............................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................TTTACAAAGATGACAGGTGTAGCTGACAT............................................................................................................................................................................................................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................AATTTAGAAATTCGGACGTTGAAACGGAA.............................................................................. 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................TTGAAGCGGATGATGATCATC.................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................GCTGACATTAAAATT...................................................................................................................................................................................................................................................................................................... 15 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................AAGTTGACAGGTGTAGCTAC................................................................................................................................................................................................................................................................................................................ 20 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TGTAATTTTAACTTGTCTAGAG......................................................................................................................................................................................................... 22 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................................................AACTCTCGAATTGAGAGAGT................................................................................................................................................. 20 3 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................AATGGCATAAGTCTT.................................................................................................................................................................................................................................................................................. 15 1 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
...................................................................................TGACATGTGGAGCTGAC............................................................................................................................................................................................................................................................................................................... 17 2 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CAAGGATTGTGAGAT......................................................................................................................................................................... 15 1 13 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................TCGGACGATAAAACGGGTGA............................................................................ 20 3 18 0.06 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................TCCAGAGATCTTCGCACGT............................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................................................GGTTAGCTGGTGGCAGTGT............ 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................GTTGAAACGGGTGACG.......................................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................ATTTGGGCGTTGAAACGGT............................................................................... 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

CCGTCTAGCTTGACGAGAAGTTACTACAATGTTTAAAACAAGCGAACAAACGATACAACAAATTCTCTCTGGAAAATGTTTCTACTGTCCACATCGACTGTAATTTTAACCGTATTAACGTATTCAGAATCTTGGTTCTTCATATAAGTTTGACAGCGTCTTAAGTATTAACGGACGTGAACATTAAAATTTAACAGGTCTTTACAAGCGTTCAGTCTCGTTCCGAACACTCTAATTATTAAGAGCTTCACTCTGTCACGTCGATGTTGGGAATGGTTTAGTATAACTTCTAGATTTTAAATCTTTAAGCCTGCAACTTTGCCTACTACTAGTAGTGAAGGGACCTTAACGTCGATTTTTATTTTAGAACTTCGAATCGACCACCGTAAGAGGACAACTATAC
*******************************************************************************.............((((((((((............(((....)))(((..((((......))))..)))......((((((.((..........(((((((.(((((((((..................))).))))))))).))))..(((.(((((........)))))))))).)))))).))))))).)))....((...(((..(((((..(((((...)))))..)))))....)))...)).*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR902009
testis
 M053
female body
 O002
Head
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 M025
embryo
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
.......................................................................................................................................................................................................CTTTACAAGCGTTCAGTCTC........................................................................................................................................................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TCAGAATCTTGGTTCTTCATA................................................................................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GAATCTTGGTTCTTCATATAA................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................AGTTTGACAGCGTCTTAAGTA............................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................CATATAAGTTTGACAGCGTC................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GCGTTCAGTCTCGTTCCGAA................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................TCTGTCACGTCGATGTTGGGAA.................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................CCGTATTAACGTATTCAGAAT................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................................................................................................................AGACTGGAAGTTTGCCTACTACT......................................................................... 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................TTAAGTATTAACGGACGTGA............................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................ACGATACAACAAATTCTCTCT............................................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GTTCAGTCTCGTTCCGAACAC............................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................CAGTCTCGTTCCGAACACTCT.......................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................CAGCGTCTTAAGTATTAAC....................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................ACAGCGTCTTAAGTATTAA........................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................................................................GTTGGGAATGGTTTAGTATAA..................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CGGACGTGAACATTAAAATTTAACAGGT............................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................CTGTCCAGATAGACTGTATTTTT........................................................................................................................................................................................................................................................................................................ 23 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................................................................................................................................................................................................ATGTTGGGAGTGGTTT............................................................................................................................ 16 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1
.......................................................................................................................................................................................................................................................................ATGTTGGGATTGGTATAG.......................................................................................................................... 18 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................GCCGACTACTGGTAGTGA................................................................. 18 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CACATCGACTGTAATAAT........................................................................................................................................................................................................................................................................................................ 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................AAAGTGTTTCTACTGTCA......................................................................................................................................................................................................................................................................................................................... 18 2 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................ATGTTGGGAGTGGTT............................................................................................................................. 15 1 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 1
................................................................ATCTCTGGAAGATGTTT.................................................................................................................................................................................................................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................TCGATGTTGGGAGTTG............................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 4:108437-108839 + dsi_3841 GGCAGATCGAACTGCT-CTTCAATGATGTTACAAA---T-TTTGTTCGCTTGTTTGCTATGTTGTTTAAGAGAGACCTTTTACAAAG----ATGACAGGTGTAGCTGACATTAAAA-----TTGGCA-------------TAATTGCATAAGTCTTAGAA--------------------------------------CCAAGAA--------GTATATTCAAACTGTCGCAGAAT--T-----------------------------------------------------------------------------------------------------CATAATTGCCTGCAC---------TTGTAATTTTAAATTGTCC-AGAAATGTTCGCAAGTCAGAGCAAGGCTTGTGAGATTAATA------ATTCTCGAAGTGAGACAGTGCAGCTACAACCCTTACCA-----AAT-CATATTGAAGATCTAAAATTTAGAAA----TTCGGACGTTGAAACGG---ATGATGATCATCACTTCCCTGGAATTGCAGCTAAAAATAAAATCTTGAAGCTTAGCTGGTGGCATTCTCCTGTTGATATG
droSec2 scaffold_52:99316-99718 + GGCAGATCGAACTGCT-CTTCAATGATGTTACAAA---T-TTTGTTTGCTTGTTTGCTATGTTGTTTAAGAGAGACCTTTTACAAAG----ATGACAGGTGTAGCTGACATTAAAA-----TCGGCA-------------TAATTGCATAAGTCTTAGAA--------------------------------------CCAAGAA--------GTATATTCAAACTGTCGCAGAAT--T-----------------------------------------------------------------------------------------------------CATAATTGCCTGCAC---------TTGTAATTTTAAATTGTCC-AGAAATGTTCGCAAGTCAGAGCAAGGCTTGTGAGATTAATA------ATTCTCGAAGTGAGACAGTGCAGCTACAACCCTTACCA-----AAT-CATATTGAAGATATAAAATTTAGAAA----TTCGGATGTTGAAACGG---ATGATGATCATCACTTCCCTGGAATTGCAGCTAAAAATAAAATCTTGAAGCTTAGCTGGTGGCATTCTCCTGTTGATATG
dm3 chr4:154940-155346 + GGCAGATCGAACTGCT-CTTCAATGATGTTACAAA---T-TTTGTTCGCTTGCTTTCTATGTTGTTTAAGAGAGACATTTTACAAAG----ATGGCAAATGTAGCTGACATTAAAA-----TTTGCA-------------TAATTGCATAAGTGTTAGAAACAAGAA-------------------------TAAGAACCAAGA--------AGTATATTCAAAGTGTCGAAGAAT--T-----------------------------------------------------------------------------------------------------TATAATTGCCTTCAC---------TTGTAATTTTAAATTGTTC-AGAAATGTTCGCAAGTCAGAGCAAGGCTTGTGA---------------TTCTCCGAGTGAGACTGTGCACCTACAGTCTTTACCA-----AAT-CATATTGAAGATCTAAAATTTAGAAA----TTCTGATGTTGAAACGG---ATGATGATCTTCACTTCCCTGGAATTGCAGCTAAAAATAAAATCTTGAAGCTTAGCTGGTGGCATTCTCCTGTTGATATG
droEre2 scaffold_4512:1169326-1169731 - AGCATATCGAACTGCT-CTACAATGGTATTACAAA---A-AATGTTCGCTTATTCCCTATGTTGTTTAAGAGAGAGATTTTACAAAG----ATCAGATGTGTAGCTGACATTT-----------CCA-------------ATATTGCATAAGTCTTACAA--------------------------------------CCAAGAATAATAACAGTATATCCAAGCTGTCGCAGAAT--T----------------------------------------------------------------------------------------------------AAATATTTGCTTGCCT---------TTGTAATTTTAAATTGTTC-AGAAATGTTCACAAGTCAGAGCAAGGCGTGTGAGATTACCA------ATTCTCAAAATGAAACAGTGCAGCTACAATCGTTACCA-----AAT-CACATTGAAGAGCTAAAATTTGGAAA----TTCGGATGTTGAAACGG---ATGAGGATCTTCACTTCCCTGGAATTGCAGCTAAAAATAAAATCTTGAAGCTGAGCTGGTGGCATTCTCCTGTTGAAATG
droYak3 4:126689-127097 + AGCAGATCAAACTGCG-CTACAATGATATTAAAAA---T-TTCTTTTGCTTGTTCCCTATGTTGTTCAAGAAAAAAATGTTGCAAAG----ATCAGAGGTGTAGCTGACATTATAA-----CTAA----------------TATATCATAAGTCTTACAA--------------------------------------CCAAGAAGAATAACAGTATATTCAAGCTGTCGCAGAAC--T----------------------------------------------------------------------------------------------------AAAAAGTTGCCTTCCT---------TTGTAATTTTAAATTGTTC-AGAAATGTTCACAAGTCAGAGCAAGGCTTGTGAGATTACTA------ATTCTCAAAGTGAGACAGTACAGCTACAGTCATTACCA-----AAT-CACATTGAAGAGCTAAAATTACGGAA----TTCAGATGGTGATACGG---ATGAGGATCTTCACTTCCCTGGAATTGCAGCTAAAAATAAAATCTTGAAGTTGAGCTGGTGGCATTCTCCTGTTGAAATG
droEug1 scf7180000406964:93600-93992 + AGCAGATCAATTTGGAAAAAAAATGTTATTAGAGA---A-ATTTATTGATAGTTACATATACATCTTAAGCGATTTATTTTATAAAG----TCCAGAAGTTTAGCTGACATTCATG-----TTGCCC-------------AAC------------------------------------------------------------TACCGTCACAGTATACTCAAGCTATAGTTGACTGTT----------------------------------------------------------------------------------------------------GCGAAATTGCTTGCTT---------TCCTAATTCTGGGTAGTTT-TAAGATGTTTACAAATAAGGACCAAACTACTGAGATCGCGA------ATTCTCGCTGTGAAATGTTGCAGCTAAAATCATCATCA-----ATG-CGGGATATAGACACACAATTTAAAGT----TGCAGAAATTGAAACGG---AGGAGCATCTTCACTTCTCTCGTATAGCTGCTAAAAATAAACACTTAAAGCTTAGTTGGTGGCATTCATCTGCTGAAGTG
droBia1 scf7180000302087:217572-217964 - AAAAGACCAAACTGTG-CTAAAATGATGCTAAAAA---T----AATTCGTGGTTTTCTATATTGCTTAAGAAAGATATTTTATAAAG----GCCAGATGTGCAGCTGACATTTCTT---GGTGACTC-------------AAATTTCTTAAGTCTTAA-A--------------------------------------CCGAATAGCATTGCAATTTGTTCAAGCTTTCGTTTA---------------------------------------------------------------------------------------------------------------CTGCTGTCAC---------TGGTAATTTGTAATTGTGTAAAAAATGTTTACTAGTCAGTACAAGTCTAC---------AG------ATTCTCGCAATGAGACGTTGCAGCTTAATTCATTACCA-----AAT-TTAGATAAAAATTCAAAATTTGATGT----TTTGGAATTTGAAACGG---AGGAGGATCTTCAGTTCCCTCAAATTGCCGCTAAAAATAAACTTTTAAAACTAAGTTGGTGGAATTCGCCAGCTGAAGTC
droTak1 scf7180000410972:30943-31357 + AGCAGACCAAACTGTG-TTAAAATGATAATACAGA---A-ATTTATGGATGGTTTCCTATACTGCTTAAGAAAGATATTTTTTAAAG----ACCAGATGTGCAGCTGACATTATAA-----TTGCAC-------------AAATTTAATAAGTCTCAAAC--------------------------------------TCAAATATCATCACAACATATTTAAGCTGTCGTTGACTGTT----------------------------------------------------------------------------------------------------GCGAAATTACCTGCTT---------CCTTGATTTCTAATTGTTTAAAAAATGTTTACTAGTCAGGGCGAGGCTACTGAGATTGCAA------CCTCTCGAAGTGAGACTTTGCAGCTAAATTCATTACCA-----AAT-TTGACTGAAAGCTCAAAATTTAACGA----TTTAGAGTCTGAAACGC---AGGAGGATCTTCAGTTCTCTCGAATTGCTGCTAAAAATAAGCTATTGAAGCTAAGTTGGTGGCACTCGCCCGCTGAAGCT
droEle1 scf7180000491238:1399491-1399871 - AGTAGGCCAAACAGAA-CTAAAATGATATTTGGGA---A-ATCAATTGTTGGTTTCATTTCCTGCTTCAGAGTGATAGTTTGTAAAG----GCCAGATGTGCAGCTGACATTAGAG-----TCGCCC-------------ACAACTTTTAAAACTCAAAA--------------------------------------CAAAATA--------------------------------------------------------------------------------------------------------------------------------------GCAAAACTACATGCTT---------TCTTAAGTTCTTACTGTTTAAAAGATGTTTACAAGCCAGGGTAAGCCTACTGAGATTGCTA------AATCTCATAGTGAGACTTTGCAGCTCAAATCATTACCA-----GAT-CTGGCTAAAAACAACAAAATTATAGA----TGTGGATGTCGAAACGG---AGAAAGATCTTCAGTTCCCTCAAATTGCTTCGAAAAATAAACTCTTGAAGCTTAGTTGGTGGCATTCACCCGCTCAAGCG
droRho1 scf7180000770631:15646-16025 + AGTAGGCCAAACCGAA-TTAAAATGATATATGTGA---A-ATCTATTGCTAGTTTTCTATACTGCTTCAGAGTGATATTTTGTAAAG----TACTGGTGTGCAGCTGACATTATCG-----TCGCTC-------------TAACTTTTGAAGTCTCTAAA--------------------------------------CAAAATA--------------------------------------------------------------------------------------------------------------------------------------GTGAAATTACCTGCTT---------CCTCATTTCTAATTGCTTT-AAAGATGTTTACAAGTCAGGGAAACGCTAATGAAATTGCTA------TTTCTCGAAGTGAGACGTTGAAGCTAAAATCATTATCA-----GAA-CTGACTAAAAACCAAAAAAGTGGAGA----TTTGGATGTTGAATCGG---AGGATGATCTTACGTTCTCTCGAATTGCTTCTAAAAATAAACTTTTGAAGCTTAGCTGGTGGCATTCACCCACTCAAATA
droFic1 scf7180000454086:227557-227970 - GGAAAATCAAACCGTG-TTAAAATGGTATTAGTCA---A-ATTTATTGACGTTTTTTTTAACTACTTCAGGGTGGTATTTTGTAAAG----TTCAGATGCGCAGCTGACATTATAG-----GTGCCC-------------AAACTTCTTAATTCTTAAGAATAAGGA-------------------------TCA-----AATTAAGATCACAGTATATTTAAGCTATCGTCAACTGCT----------------------------------------------------------------------------------------------------GCAAAATTTCTTGCTT---------CTTCAAAACCAACCTGATTTTAAGATGTTGACGAATCAAGGCCAAGCCTCTGAGATTGCCA------GTTCTCCCAATGACGCGTTGCAGCTACAACCATTATCA-----AAT-TTGGCCAATAATTTA------ACAAA----TTCGGATTTTGAA---G---AAGAGGATCTTCGATTCTCTCGAATAGCTGATAAAAATAAACTTTTGAAACTTAGTTGGTGGCACTCCCAGGCTGCAACG
droKik1 scf7180000302252:33686-34120 - GGCAG---------TG-CTAAAATGAAATTTATGG---A-ATTCACCACCGATCGTCTAAACTGCTTAATAATACCATTGTTAGAAG----ATCAAGTGTTCAGCTGACATTTCAGCTCGGTCACCA-------------ACATTTTCTCAGTCTTTAGT--------------------------------------GT-AAAATAAT--CAGTATGGACAC------------------------------------------------------------------------------------GTAGCAATGCTAGCCTGTAGAAAGCTCTGTTAGCAAAACTAAACCCTTCTTTTAGTTTTGTATAATTAAATTATTAGAAATATGTTTACTAATGACGA---CTCATGTGGCATTGCCATTGGCTCTACACGTACTGAGGCATTGCAGATGAATTCAATACCGCCGAAAGTAGTAACAAAAAATCTTCAATTTCGAGAC-TTGGAGGATTTTGACACTGAACAAAATAGCCCTGAGCTCTCTGGAATAGCTACAAAAAACAAATTATTAAAGCTTAATTGGTGGCATTC-------------
droAna3 scaffold_13010:424364-424481 - TGTAAATAAAAAAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAAAC----TTCGTATTTAGATATAG---ATGAAAATATTCAGTCCTCTCGTATAGCTACCAAAAACAAAATTTTGAAGCTTAATTGGTGGCATTCGACCCATCAATTG
droBip1 scf7180000394983:16768-16867 - AAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATATTTAGATATGG---ATGAAAATAGTCAATCCTCTAAAATAGCTAACAAAAACAAACTTTTGAAGCTTAATTGGTGGCATTCGCCCAATCAATTG
droPer2 scaffold_51:21067-21502 + GACAAACGAAAATGCC-C----------GCAGTCA---G-ATTCTCAACGATTTCGTCTTGTTGCATCGTAGTGATTGTTTGTGAAACA-CAAGAGTTTCGTAGCTGACATTACAG-----CCACGA-------------ATATTTCCACAGAATCTACAGGAATGGTCTATTCGGCTCCCTACGTAATAAATAAAAACCCAAA--------CATATGAACAT-----------------------------------------------------------ATAATATCGGCGCATT-------------------------------------GTT-AATGATGTTCTGA-TT-------TTCTGAGTTCTTTCCTCGCTTAGAACATGTCTGTTTGTCAAAGTGAAGGCGCAGACATCGCAG------CCTCTCGTCCAGAGACGTTGCAGTTGCAATCTTTATCA-----AAC-GCTATTGTAAACTCAAGAGAGAAA----------GACTTGGATACAG---AGGAATACTATCCCTTTTCACGAATTGCTACCAAAAACAATCGCTTAAAGCTCAATTGGTGGCATTCACCCACACAACCG
droWil2 scf2_1100000004943:1073351-1073433 - TGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGGACTCCCTACTTTCCCCGAATCGCCACGAAAAACAACTTGTTAAAACTAAACTGGTGGCACTCACCCACTCAACCA
droGri2 scaffold_14822:406956-407343 - TATCGATGAA----TT-CAGCAAGGATGTTGCCATTTGACACTGGCCGCCATTTTGCAGCGCTTCCCGCATGCCGCGTGCAACACAA--GCAGCCGCTGTGCAGCTGACATATCAA---A-TTAACAAAACATAATTTCTCAACTATATAAGTATC---------------------------------------------------------------------TAGTATATAAT--TTATAAATCTCCGCCACTGTATATAAAAACAAAATAATTGACCAAAAATGTCAGCGACCCAACAGAGTGAGAGCATTACCTGTCGGTCGAATGCGCAGCCA-------------------------------------------------------------------------------------------------------G---CAATGGTGCTGCAGCCCCTGGCG-----GAC-GAAACGGGC------------AGCAG-CCGGCAAGCAGCGGAACAAG---AGGAATTATTACAATTTTCACGTATTGCCACCAAAAATAATCTTTTAAAGCTTAATTGGTGGCACTCACC----------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGCAGATCGAACTGCT-CTTCAATGATGTTACAAA---T-TTTGTTCGCTTGTTTGCTATGTTGTTTAAGAGAGACCTTTTACAAAG----ATGACAGGTGTAGCTGACATTAAAA-----TTGGCA-------------TAATTGCATAAGTCTTAGAA--------------------------------------CCAAGAA--------GTATATTCAAACTGTCGCAGAAT--T-----------------------------------------------------------------------------------------------------CATAATTGCCTGCAC---------TTGTAATTTTAAATTGTCC-AGAAATGTTCGCAAGTCAGAGCAAGGCTTGTGAGATTAATA------ATTCTCGAAGTGAGACAGTGCAGCTACAACCCTTACCA-----AAT-CATATTGAAGATCTAAAATTTAGAAA----TTCGGACGTTGAAACGG---ATGATGATCATCACTTCCCTGGAATTGCAGCTAAAAATAAAATCTTGAAGCTTAGCTGGTGGCATTCTCCTGTTGATATGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGAAA----TTCGGACGTTGAAACGG---A...............................................................................26111.001100000010001018000
................................................................................TACAAAG----ATGACAGGTGTAGCTGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2617.00700000061000000000
..............................................................................TTTACAAAG----ATGACAGGTGTAGCTGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2816.00600000032010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAA----TTCGGACGTTGAAACGG---A...............................................................................2415.00500000030000002000
..........................................................................................................................................................................................................................................................................................................................................................................................TGTCC-AGAAATGTTCGCAAGTCAGAGCA.........................................................................................................................................................................................................2815.00500000031000001000
..........................................................................................................................................................................................................................TTCAAACTGTCGCAGAAT--T-----------------------------------------------------------------------------------------------------CATAAT......................................................................................................................................................................................................................................................................2515.00500000022000001000
..........................................................................................................................................................................................................................................................................................................................................................................................TGTCC-AGAAATGTTCGCAAGTCAGA............................................................................................................................................................................................................2515.00500000041000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATTGAAGATCTAAAATTTAGAAA----T...................................................................................................2714.00400000013000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGACGTTGAAACGG---ATGATGATCAT.....................................................................2714.00400000020001001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGAAA----TTCGGACGTTGAAACGG---AA..............................................................................2714.00400000000000004000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGACGTTGAAACGG---ATGATGATCATC....................................................................2814.00400000020000002000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACCCTTACCA-----AAT-CATATTGAAGA.......................................................................................................................2814.00400000011000011000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGAGATTAATA------ATTCTCGAAGTGA....................................................................................................................................................................2714.00400000031000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAAAATTTAGAAA----TTCGGACGTTGA........................................................................................2714.00400000000000022000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAATTTAGAAA----TTCGGACGTTGA........................................................................................2513.00300000001000002000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAAAATTTAGAAA----TTCGGACGT...........................................................................................2413.00300000001000020000
..............................................................................................................................................................................................................................................................................................................................................................................................................GTCAGAGCAAGGCTTGTGA...............................................................................................................................................................................................1913.00302100000000000000
...............................................................................TTACAAAG----ATGACAGGTGTAGCTGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300000021000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----TTCGGACGTTGAAACGG---AT..............................................................................2013.00300300000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGAAGTGAGACAGTGCAGCTACAA....................................................................................................................................................2613.00300000000000003000
.........................................................................................................................................................................................................................................................................................................................................................................................TTGTCC-AGAAATGTTCGCAAGTCAGA............................................................................................................................................................................................................2613.00300000000012000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAAA----TTCGGACGTTGAAACGG---A...............................................................................2513.00301000010001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAAA----TTCGGACGTTGAAACGG---AA..............................................................................2612.00200000000000011000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGACAGTGCAGCTACAACCCTTACCA-----A.....................................................................................................................................2912.00200000000000002000
..........................................TGTTCGCTTGTTTGCTATGTTGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000010001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGCTTAGCTGGTGGCATTCTCC..........2612.00200000000000002000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCA-----AAT-CATATTGAAGATCTAAAAT...............................................................................................................2712.00200000020000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTTGAAACGG---ATGATGATCATCAC..................................................................2712.00200000001000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCA-----AAT-CATATTGAAGATCTAAAAT...............................................................................................................2812.00201000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAATTTAGAAA----TTCGGACGTTGAAA......................................................................................2712.00200000010000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-CATATTGAAGATCTAAAATTTAGAAA----T...................................................................................................2812.00200000020000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAAAATTTAGAAA----TTCGGACGT...........................................................................................2512.00200000000000002000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAGAAA----TTCGGACGTTGAAACGG---AA..............................................................................2812.00200000000000002000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGAAGTGAGACAGTGCAGCTACA.....................................................................................................................................................2612.00200000000000002000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGAAGATCTAAAATTTAGAAA----TT..................................................................................................2612.00200000011000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGACGTTGAAACGG---ATGATGATCA......................................................................2612.00200000001000001000
..........................................................................................................................TGGCA-------------TAATTGCATAAGTCTTAGAA--------------------------------------CCAA......................................................................................................................................................................................................................................................................................................................................................................................................................2912.00200000000000002000
........................................................................................................................................................................................................................TATTCAAACTGTCGCAGAAT--T-----------------------------------------------------------------------------------------------------CATAAT......................................................................................................................................................................................................................................................................2712.00200000020000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCA-----AAT-CATATTGAAGATCTAAAATT..............................................................................................................2612.00200000020000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCTGGAATTGCAGCTAAAAAA..........................................2412.00200000000000002000
..........................................................................................................................................................................................................................................................................................................................................................................................TGTCC-AGAAATGTTCGCAAGT................................................................................................................................................................................................................2111.00100000000001000000
..............................................................................................................................................................................................................................AACTGTCGCAGAAT--T-----------------------------------------------------------------------------------------------------CATAATTGCC..................................................................................................................................................................................................................................................................2511.00100000001000000000
............................................................................................TGACAGGTGTAGCTGACATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGAAGATCTAAAATTTAGAAA----T...................................................................................................2611.00100000010000000000
.............................................................................................................................................AATTGCATAAGTCTTAGAA--------------------------------------CC........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.................................................................................................................................................GCATAAGTCTTAGAA--------------------------------------CCAAGAA--------GTAT.......................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
.........................................................................................................TGACATTAAAA-----TTGGCA-------------TAATTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACCCTTACCA-----AAT-CATATTGAA.........................................................................................................................2611.00100000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCATCACTTCCCTGGAATTGCAGCT................................................2711.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCGAAGTGAGACAGTGCAGC.........................................................................................................................................................2311.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-CATATTGAAGATCTAAAATTTAGAAA----....................................................................................................2711.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTTGAAACGG---ATGATGATCATCACT.................................................................2811.00100000010000000000
......................................................................................................AGCTGACATTAAAA-----TTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
...........................................................................................................................................................................................................AA--------GTATATTCAAACTGTCGCAGAAT--T-----------------------------------------------------------------------------------------------------CAA.........................................................................................................................................................................................................................................................................2911.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGACAGTGCAGCTACAACCCTTA..............................................................................................................................................2511.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGACGTTGAAACGG---ATGATGAT........................................................................2411.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGCTTAGCTGGTGGCATTCTCC..........2511.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGACGTTGAAACGG---ATGATGATC.......................................................................2511.00100000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----TTCGGACGTTGAAACGG---A...............................................................................1911.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCA-----AAT-CATATTGAAGATCTAAAATT..............................................................................................................2811.00100000010000000000
...............T-CTTCAATGATGTTACAAA---T-TTTGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAA----TTCGGACGTTGAAACGG---AA..............................................................................2511.00100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAGTGAGACAGTGCAGCTACAACC..................................................................................................................................................2711.00100000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAATCTTGAAGCTTAGCTGGTGGCA................2711.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAACGG---ATGATGATCATCACTT................................................................2511.00100000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACCCTTACCA-----AAT-CATA..............................................................................................................................2111.00100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGATCTAAAATTTAGAAA----TTCGGAC.............................................................................................2811.00100000000000001000
....................................................................................................GTAGCTGACATTAAAA-----TTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGTGCAGCTACAACCCTTAC.............................................................................................................................................2311.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTGCAGCTACAACCCTTA..............................................................................................................................................2111.00100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCTACAACCCTTACCA-----AAT-..................................................................................................................................2311.00100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAGTGAGACAGTGCAGCTACAACCC.................................................................................................................................................2811.00100000000000001000
........................................................................................................................................................................................................................TATTCAAACTGTCGCAGAAT--T-----------------------------------------------------------------------------------------------------CATA........................................................................................................................................................................................................................................................................2511.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCAGCTACAACCCTTACCA-----AAT-CATAA.............................................................................................................................3011.00100000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTAAAATTTAGAAA----TTCGGACGT...........................................................................................2611.00100000000000001000
......................................................TGCTATGTTGTTTAAGAGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
.........................................................TATGTTGTTTAAGAGAGACCTTTTACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
..........................................................................................................................................................................................................................TTCAAACTGTCGCAGAAT--T-----------------------------------------------------------------------------------------------------CATAATTGC...................................................................................................................................................................................................................................................................2811.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTGGAATTGCAGCT................................................1711.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCATCACTTCCCTGGA.........................................................1911.00100001000000000000
........................................................................................................................................................................................................................TATTCAAACTGTCGCAGAAT--T-----------------------------------------------------------------------------------------------------CATAA.......................................................................................................................................................................................................................................................................2611.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCTACAACCCTTACCA-----AAT-CAA...............................................................................................................................2611.00100000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGACGTTGAAACGG---ATGATGAT........................................................................2511.00100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAA----TTCGGACGTTGAAAC.....................................................................................2111.00101000000000000000
......................................................................................................................................................................................................................TATATTCAAACTGTCGCAGAAT--T-----------------------------------------------------------------------------------------------------CATA........................................................................................................................................................................................................................................................................2711.00100000010000000000
..............................................................................TTTACAAAG----ATGACAGGTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCGAAGTGAGACAGTGCAGCTACAACC..................................................................................................................................................3011.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGACAGTGCAGCTACAACCCT................................................................................................................................................2511.00100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGAAACGG---ATGATGAC........................................................................1911.00100100000000000000
.............................................................................................................................................AATTGCATAAGTCTTAGAA--------------------------------------CCAAGAA--------G..........................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACCCTTACCA-----AAT-CATATTGAAGATC.....................................................................................................................3011.00100000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTTAGAAA----TTCGGACGTTGAAAC.....................................................................................2711.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGAAGTGAGACAGTGCAGCTACAACCC.................................................................................................................................................2911.00100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGAAGTGAGACAGTGCAGCTACAAC...................................................................................................................................................2711.00100000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGAAGTGAGACAGTGCAGCTACAAC...................................................................................................................................................2811.00100000000000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAA----TTCGGACGTTGAAACGG---T...............................................................................2411.00100000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTAGAAA----TTCGGACGTTGAAACGG---A...............................................................................2911.00100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGCTAAAAATAAAATCTTGAAGC.............................2711.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAAAATTTAGAAA----TTCGGACGTT..........................................................................................2611.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGATTAATA------ATTCTCGAAGTGAGAC.................................................................................................................................................................2811.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGAAA----TTCGGACGTTGAAACGG---T...............................................................................2611.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCCTTACCA-----AAT-CATATTGAAGA.......................................................................................................................2511.00100000000000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TA------ATTCTCGAAGTGAGACA................................................................................................................................................................1911.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATCTAAAATTT.............................................................................................................1511.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACGTTGAAACGG---ATGATG..........................................................................2111.00100000100000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................AGTCAGAGCAAGGCTTGTGA...............................................................................................................................................................................................2011.00100000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCTGGAATTGCAGCTAAAAATAA........................................2611.00100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGAAGTGAGACAGTGCAGCTACAACC..................................................................................................................................................2911.00100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAGTGAGACAGTGCAGCTACA.....................................................................................................................................................2411.00100000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGCTTAGCTGGTGGCATTCTCCTG........2811.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGTGAGACAGTGCAGCTACAACCC.................................................................................................................................................2711.00100000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTCGAAGTGAGACAGTGCAGC.........................................................................................................................................................2411.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAAAATTTAGAAA----TTCGGACGTTG.........................................................................................2611.00100000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAGATTAATA------ATTCTCGAAGTGA....................................................................................................................................................................2611.00100000010000000000
....................................................................................................................................................................................................................................CGCAGAAT--T-----------------------------------------------------------------------------------------------------CATAATTGCCT.................................................................................................................................................................................................................................................................2011.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAAAATTTAGAAA----TTCGGACGTT..........................................................................................2511.00100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGGCTTGTGAGATT...........................................................................................................................................................................................1811.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----AAT-CATATTGAAGATCTAAAATT..............................................................................................................2411.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAA----TTCGGACGTTGAAACGG---AT..............................................................................2411.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAATTTAGAAA----TTCGGACGTTG.........................................................................................2411.00100000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGAAGCTTAGCTGGTGGCATTC.............2511.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAA----TTCGGACGTTGAAACGG---ATGA............................................................................2711.00100000000000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----TTCGGACGTTGAAACGG---ATG.............................................................................2111.00100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCTACAACCCTTACC............................................................................................................................................1911.00100010000000000000
........................................................................................................................................................................................................................TATTCAAACTGTCGCAGA......................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGTGCAGCTACAACCCTTACCA-----......................................................................................................................................2511.00100010000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGACGTTGAAACGG---ATGATGATCAT.....................................................................2811.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACCCTTACCA-----AAT-CATATTGAAGAT......................................................................................................................2911.00100000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................TGTCC-AGAAATGTTCGCAAGTCAGAGCAA........................................................................................................................................................................................................2911.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGAAGATCTAAAATTTAGAAA----T...................................................................................................2511.00100000010000000000
............................................TTCGCTTGTTTGCTATGTTGTTTAAGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGACAGTGCAGCTACAACCCTTACCA-----......................................................................................................................................2811.00100000000000001000
.............................................................................................................................................................................................................................AAACTGTCGCAGAAT--T-----------------------------------------------------------------------------------------------------CATAATTGCCT.................................................................................................................................................................................................................................................................2711.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAATTTAGAAA----TTCGGACGTTGA........................................................................................2611.00100000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AATA------ATTCTCGAAGTGA....................................................................................................................................................................1711.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCCTTACCA-----AAT-CATATTGAAGATC.....................................................................................................................2711.00100000010000000000
................................................................................TACAAAG----ATGACAGGTGTAGCTGACATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTTACCA-----AAT-CATATTGAAGA.......................................................................................................................2411.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-CATATTGAAGATCTAAAATTTAGA..........................................................................................................2611.00100000010000000000
..................................................................................CAAAG----ATGACAGGTGTAGTAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.00200000000000002000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGATCATCACTTCCCTGGAATT......................................................2511.00100000010000000000
..........................................................................................................................................................TTAGAA--------------------------------------CCAAGAA--------GTATATTCAAACT..............................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGCTTGTGAGATTAATA------ATTCTC...........................................................................................................................................................................2611.00100000000001000000
...............................................................................TTACAAAG----ATGACAGGTGTAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAA----TTCGGACGTTGAAACGG---AT..............................................................................2511.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCTTAGCTGGTGGCATTC.............2111.00100001000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAACGG---ATGATGATCATCACTTCC..............................................................2711.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTAGAAA----TTCGGACGTT..........................................................................................2111.00100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGATCATCACTTCCCTGGAATTGC....................................................2711.00100000010000000000
.............................................................................TTTTACAAAG----ATGACAGGTGTAGCTGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
............................................................................................................................................................................................................................CAAACTGTCGCAGAAT--T-----------------------------------------------------------------------------------------------------CATAATTGCC..................................................................................................................................................................................................................................................................2711.00100000010000000000
....................................................................................................................................................TAAGTCTTAGAA--------------------------------------CCAAGAA--------GTATAT.....................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAGTGAGACAGTGCAGCTACAACCCT................................................................................................................................................2911.00100000000000001000
..............................................................................................................TTAAAA-----TTGGCA-------------TAATTGCATAAGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGAAGCTTAGCTGGTGGCATTCTCT..........2811.00100000000000001000
....................................................................................................................................................TAAGTCTTAGAA--------------------------------------CCAAGAA--------GTATATT....................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGACAGTGCAGCTACAACCCTTAA.............................................................................................................................................2611.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGACGTTGAAACGG---ATGA............................................................................2011.00100000000001000000
..............................................................................TTTACAAAG----ATGACAGGTGTAGCTGACAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTAGAAA----TTCGGACGTTGAAACGG---AA..............................................................................2911.00100000000000001000
.......................................................................................................GCTGACATTAAAA-----TT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000001000000000
droSec2
GGCAGATCGAACTGCT-CTTCAATGATGTTACAAA---T-TTTGTTTGCTTGTTTGCTATGTTGTTTAAGAGAGACCTTTTACAAAG----ATGACAGGTGTAGCTGACATTAAAA-----TCGGCA-------------TAATTGCATAAGTCTTAGAA--------------------------------------CCAAGAA--------GTATATTCAAACTGTCGCAGAAT--T-----------------------------------------------------------------------------------------------------CATAATTGCCTGCAC---------TTGTAATTTTAAATTGTCC-AGAAATGTTCGCAAGTCAGAGCAAGGCTTGTGAGATTAATA------ATTCTCGAAGTGAGACAGTGCAGCTACAACCCTTACCA-----AAT-CATATTGAAGATATAAAATTTAGAAA----TTCGGATGTTGAAACGG---ATGATGATCATCACTTCCCTGGAATTGCAGCTAAAAATAAAATCTTGAAGCTTAGCTGGTGGCATTCTCCTGTTGATATGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCAAGGCTTGTGAGATTA..........................................................................................................................................................................................2112.0021100
....................................................................................AAG----ATGACAGGTGTAGCTGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTGAAACGG---ATGATGAT........................................................................2011.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTGAAACGG---ATGATGATCATC....................................................................2511.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCACTTCCCTGGAATTG.....................................................2111.0011000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAACGG---ATGATGATCATC....................................................................2111.0010001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAAATTTAGAAA----TTCGGATGTTGA........................................................................................2711.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................GTCAGAGCAAGGCTTGTGA...............................................................................................................................................................................................1911.0011000
..........................................................................................................................................................................................................................TTCAAACTGTCGCAGAAT--T-----------------------------------------------------------------------------------------------------CATAATTGCC..................................................................................................................................................................................................................................................................2911.0011000
............................................................................................................................................TAATTGCATAAGTCTTAGAA--------------------------------------CCAAGAA--------...........................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................GTTCGCAAGTCAGAGCAAGGC.....................................................................................................................................................................................................2111.0010001
...................................................GTTTGCTATGTTGTTTAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAA----TTCGGATGTTGAAACGG---AT..............................................................................2411.0010010
...............................................................................TTACAAAG----ATGACAGGTGTAGCTGACAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000
........................GATGTTACAAA---T-TTTGTTTGCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
................................................................................TACAAAG----ATGACAGGTGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...................................................................................................................................................ATAAGTCTTAGAA--------------------------------------CCAAGAA--------...........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGAAA----TTCGGATGTTGAAACG....................................................................................2411.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................TAAATTGTCC-AGAAATGTTCG.....................................................................................................................................................................................................................2111.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAGCTGGTGGCATTCTCCT.........2111.0011000
.............................................................................TTTTACAAAG----ATGACAGGTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
............................................................................................................................................................................................................................CAAACTGTCGCAGAAT--T-----------------------------------------------------------------------------------------------------CAT.........................................................................................................................................................................................................................................................................2011.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGATCATCACTTCCCTG...........................................................1911.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAAA----TTCGGATGTTGA........................................................................................1911.0010100
...........................................................................................................ACATTAAAA-----TCGGCA-------------TAATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAGCTAAAAATAAAAT.....................................2011.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATAAAATTTAGAAA----TTCGGATGTT..........................................................................................2711.0010010
dm3
GGCAGATCGAACTGCT-CTTCAATGATGTTACAAA---T-TTTGTTCGCTTGCTTTCTATGTTGTTTAAGAGAGACATTTTACAAAG----ATGGCAAATGTAGCTGACATTAAAA-----TTTGCA-------------TAATTGCATAAGTGTTAGAAACAAGAA-------------------------TAAGAACCAAGA--------AGTATATTCAAAGTGTCGAAGAAT--T-----------------------------------------------------------------------------------------------------TATAATTGCCTTCAC---------TTGTAATTTTAAATTGTTC-AGAAATGTTCGCAAGTCAGAGCAAGGCTTGTGA---------------TTCTCCGAGTGAGACTGTGCACCTACAGTCTTTACCA-----AAT-CATATTGAAGATCTAAAATTTAGAAA----TTCTGATGTTGAAACGG---ATGATGATCTTCACTTCCCTGGAATTGCAGCTAAAAATAAAATCTTGAAGCTTAGCTGGTGGCATTCTCCTGTTGATATGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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.............................................................................................................................................................................................................................................................................................................................................................................................TC-AGAAATGTTCGCAAGTCAGAGCAAG.......................................................................................................................................................................................................27114.00140000000000000000000000000000000000000100010000010000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000001000000000010000000200000100000000000000000000000000000000000000000000000000000000000000000000000100000000011000000000000000001000000
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......................................................................................................................................................................................................................TATATTCAAAGTGTCGAAGAAT--T-----------------------------------------------------------------------------------------------------TATA........................................................................................................................................................................................................................................................................27110.00100000000000000000000000000000000000000000000000000000200000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000201010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGG---ATGATGATCTTCACT.................................................................19110.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGTCTTTACCA-----AAT-CATATTGAAGA.......................................................................................................................2819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000010310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACTTCCCTGGAATTGCAGCTAAAAA...........................................2719.0090000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001001100000
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...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTGGAATTGCAGCTAAAAATAA........................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000010000000010100010000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCAAGTCAGAGCAAGGCTTGTGA---------------T...............................................................................................................................................................................2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAACGG---ATGATGATCTTCACTTC...............................................................2618.0080000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000100000000000000000000000000001000000100000000000000000000000000
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......................................................................AGAGACATTTTACAAAG----ATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TGTTGTTTAAGAGAGACATTTTACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000100000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAAAATCTTGAAGCTTAGCTGGT....................2612.0020000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................GCATAAGTGTTAGAAACAAGAA-------------------------TAA.............................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................AAGA--------AGTATATTCAAAGTGTC...........................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTAGCTGGTGGCATTCTCCTGT.......2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TGTGA---------------TTCTCCGAGTGAGACTGTG.............................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGAAA----TTCTGATGTT..........................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAATTGCAGCTAAAAATAAAATCT...................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................CATTAAAA-----TTTGCA-------------TAATTGCATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................AAGAA-------------------------TAAGAACCAAGA--------AGTATATTC...................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATGTTGAAACGG---ATGATG..........................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
...................................................................................AAAG----ATGGCAAATGTAGCTGACAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTACAGTCTTTACCA-----AAT-CATATT............................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTTCACTTCCCTGGAATTGCAGCT................................................2712.0020000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTAGAAA----TTCTGATGTTGAAACGG---A...............................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAGAAA----TTCTGATGTTGAAACGG---A...............................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATCTTGAAGCTTAGCTGGTGG..................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
.................................................................TTAAGAGAGACATTTTACAAAG----ATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000
..............................................................................TTTACAAAG----ATGGCAAATGTAGCTGACAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................T-----------------------------------------------------------------------------------------------------TATAATTGCCTTCAC---------TTGTAATT............................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TGCCTTCAC---------TTGTAATTTTAAATTGTT..................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................TATTCAAAGTGTCGAAGAAT--T-----------------------------------------------------------------------------------------------------TATAA.......................................................................................................................................................................................................................................................................2612.0020100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAACGG---ATGATGATCTTCACTT................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAAGGCTTGTGA---------------TTCTCCGAG.......................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTACCA-----AAT-CATATTGAAGATCT....................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................CAAGA--------AGTATATTCAAAGTGT............................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
............................................................................................................................................................AGAAACAAGAA-------------------------TAAGAACCAAGA--------AGT.........................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TTAGAAACAAGAA-------------------------TAAGAACCAAGA--------AGT.........................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................CAAGAA-------------------------TAAGAACCAAGA--------A...........................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATAAAATCTTGAAGCTTAGCTGG.....................2712.0020000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................TATTCAAAGTGTCGAAGAAT--T-----------------------------------------------------------------------------------------------------TATA........................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TCAAAGTGTCGAAGAAT--T-----------------------------------------------------------------------------------------------------TATAATTGCC..................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................TTGCATAAGTGTTAGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................CAAAGTGTCGAAGAAT--T-----------------------------------------------------------------------------------------------------TATAAT......................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGAAGCTTAGCTGGTGGCATTCTCC..........2712.0020000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TACAAA---T-TTTGTTCGCTTGCTTTCTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TAAATTGTTC-AGAAATGTTCGCAAG.................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TTACAAA---T-TTTGTTCGCTTGCTTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................GAAATGTTCGCAAGTCAGAGC..........................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGCTTAGCTGGTGGCATTCTCCTG........2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000
.....................................................TTTCTATGTTGTTTAAGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................AAGTGTCGAAGAAT--T-----------------------------------------------------------------------------------------------------TATAATTGCC..................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
................................................................................TACAAAG----ATGGCAAATGTAGCTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA----TTCTGATGTTGAAACGG---ATGATGA.........................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGA---------------TTCTCCGAGTGAGACT................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TCAC---------TTGTAATTTTAAATTGTTC-AGA.............................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAATTGCAGCTAAAAATAAAATC....................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................C-AGAAATGTTCGCAAGTCAGAGCAAG.......................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA----TTCTGATGTTGAAACGG---ATGATGATC.......................................................................2812.0020000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................ACAAGAA-------------------------TAAGAACCAAGA--------AGTATA......................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGCATATCGAACTGCT-CTACAATGGTATTACAAA---A-AATGTTCGCTTATTCCCTATGTTGTTTAAGAGAGAGATTTTACAAAG----ATCAGATGTGTAGCTGACATTT-----------CCA-------------ATATTGCATAAGTCTTACAA--------------------------------------CCAAGAATAATAACAGTATATCCAAGCTGTCGCAGAAT--T----------------------------------------------------------------------------------------------------AAATATTTGCTTGCCT---------TTGTAATTTTAAATTGTTC-AGAAATGTTCACAAGTCAGAGCAAGGCGTGTGAGATTACCA------ATTCTCAAAATGAAACAGTGCAGCTACAATCGTTACCA-----AAT-CACATTGAAGAGCTAAAATTTGGAAA----TTCGGATGTTGAAACGG---ATGAGGATCTTCACTTCCCTGGAATTGCAGCTAAAAATAAAATCTTGAAGCTGAGCTGGTGGCATTCTCCTGTTGAAATGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................GTCAGAGCAAGGCGTGTGA...............................................................................................................................................................................................1913.0030011100
...........................................................................................................................................................................................................................................................................................................................................................................................................CAAGTCAGAGCAAGGCGTGTGA...............................................................................................................................................................................................2212.0020001010
.............................................................................................................................................................................................................................................................................................................................................................................................................AGTCAGAGCAAGGCGTGTGA...............................................................................................................................................................................................2012.0020000200
.....................................................................................................TAGCTGACATTT-----------CCA-------------ATATTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
......................................................................................................AGCTGACATTT-----------CCA-------------ATATTGCATAAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000
...........................................................................................................................................................................................................AATAATAACAGTATATCCAAGCTGT............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
..........................................................ATGTTGTTTAAGAGAGAGATTTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTCCCTGGAATTGCAGCTA...............................................2211.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAAGAGCTAAAATTTGGAA.........................................................................................................2211.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGATGTTGAAACGG---ATGAGGATCTT.....................................................................2711.0010010000
..........................................................................AGATTTTACAAAG----ATCAGATGTGTAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
.................................AA---A-AATGTTCGCTTATTCCCTATGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGATGTTGAAACGG---ATGAGGATCT......................................................................2711.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACCA------ATTCTCAAAATGA....................................................................................................................................................................2011.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAATCTTGAAGCTGAGCTGGTGGC.................2611.0011000000
.....................................................................................................................................................................................................................GTATATCCAAGCTGTCGC.........................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAATCTTGAAGCTGAGCT.......................2111.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCTGGAATTGCAGCTAAAAA...........................................2311.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGAGCTAAAATTTGGAAA----TTC.................................................................................................2511.0011000000
................................................................................TACAAAG----ATCAGATGTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001000
......................................A-AATGTTCGCTTATTCCCTATGTTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGATGTTGAAACGG---ATGAGG..........................................................................2311.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATCTTGAAGCTGAGCTGGTGGC.................2511.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-CACATTGAAGAGCTAAAATT..............................................................................................................2211.0010000010
............................................................................ATTTTACAAAG----ATCAGATGTGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAACAGTGCAGCTACAATCGTT...............................................................................................................................................2411.0010000010
............................................................................ATTTTACAAAG----ATCAGATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.................CTACAATGGTATTACAAA---A-AATGTTCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCGTGTGAGATTACCA------ATT..............................................................................................................................................................................2211.0010000100
...........................................................................GATTTTACAAAG----ATCAGATGTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................AAGTCAGAGCAAGGCGTGTGA...............................................................................................................................................................................................2111.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCAAAATGAAACAGTGCAGCTACA.....................................................................................................................................................2711.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAATCTTGAAGCTGAGCTGGTGGC.................2711.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGAAACGG---ATGAGGAT........................................................................1911.0010000100
...ATATCGAACTGCT-CTACAATGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
...ATATCGAACTGCT-CTACAATGGTATTAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000010
..........................................................................................................................................................................................................GAATAATAACAGTATATCCAAGC...............................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAACAGTGCAGCTAC......................................................................................................................................................1811.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGAAACAGTGCAGCTAC......................................................................................................................................................2111.0010100000
...............................................................GTTTAAGAGAGAGATTTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
...........................................GTTCGCTTATTCCCTATGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.........................................................................GAGATTTTACAAAG----ATCAGATGTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCTTCACTTCCCTGGA.........................................................1911.0011000000
.................................................................................................................................................................................................................................................................................................................................................................CT---------TTGTAATTTTAAATTGTTC-AG..............................................................................................................................................................................................................................2311.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................ATGTTCACAAGTCAGAGCAAGGC.....................................................................................................................................................................................................2311.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATGAAACAGTGCAGC.........................................................................................................................................................1911.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTGTTC-AGAAATGTTCACA...................................................................................................................................................................................................................1911.0010001000
droYak3
AGCAGATCAAACTGCG-CTACAATGATATTAAAAA---T-TTCTTTTGCTTGTTCCCTATGTTGTTCAAGAAAAAAATGTTGCAAAG----ATCAGAGGTGTAGCTGACATTATAA-----CTAA----------------TATATCATAAGTCTTACAA--------------------------------------CCAAGAAGAATAACAGTATATTCAAGCTGTCGCAGAAC--T----------------------------------------------------------------------------------------------------AAAAAGTTGCCTTCCT---------TTGTAATTTTAAATTGTTC-AGAAATGTTCACAAGTCAGAGCAAGGCTTGTGAGATTACTA------ATTCTCAAAGTGAGACAGTACAGCTACAGTCATTACCA-----AAT-CACATTGAAGAGCTAAAATTACGGAA----TTCAGATGGTGATACGG---ATGAGGATCTTCACTTCCCTGGAATTGCAGCTAAAAATAAAATCTTGAAGTTGAGCTGGTGGCATTCTCCTGTTGAAATGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGG---ATGAGGATCTTCACTTCCCTGGAAT.......................................................3013.00300000000003
.................................................................................GCAAAG----ATCAGAGGTGTAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00300000030000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACGGAA----TTCAGATGGT..........................................................................................1913.00300000030000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAATCTTGAAGTTGAGCTGGT....................2412.00200000020000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTACGGAA----TTCAGATGGT..........................................................................................2212.00200000020000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTACGGAA----TTCAGATGGT..........................................................................................2012.00200000020000
...................................................GTTCCCTATGTTGTTCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00201000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAAATTACGGAA----TTCAGATGGT..........................................................................................2512.00201100000000
..........................TATTAAAAA---T-TTCTTTTGCTTGTTCCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACGG---ATGAGGATCTTCACC.................................................................2211.00100100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATACGG---ATGAGGAT........................................................................1811.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAATTACGGAA----TTCAGATGGT..........................................................................................2411.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACGG---ATGAGGATCTTCACT.................................................................2211.00100000010000
........................................................................AAAAATGTTGCAAAG----ATCAGAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..............................................................................GTTGCAAAG----ATCAGAGGTGTAGCTGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
...............................................................................................................................................................................................................ATAACAGTATATTCAAGCT..............................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTAAAATTACGGAA----TTCAGATGGT..........................................................................................2711.00101000000000
............................................................................ATGTTGCAAAG----ATCAGAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.........................................................................................................................................................................................................................ATTCAAGCTGTCGCAGAAC--T----------------------------------------------------------------------------------------------------AAAAA........................................................................................................................................................................................................................................................................2511.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATTACCA-----AAT-CACATTGAAGAGC.....................................................................................................................2611.00100000010000
..........................................................................AAATGTTGCAAAG----ATCAGAGGTGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTACCA-----AAT-CACATTGAAGAGCT....................................................................................................................2511.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATCTTGAAGTTGAGCTGGTGGC.................2511.00100100000000
..........................................................................AAATGTTGCAAAG----ATCAGAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.........................................................................................................................CTAA----------------TATATCATAAGTCTTACAA--------------------------------------CC........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...................................................................................AAAG----ATCAGAGGTGTAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTTGAGCTGGTGGCATTCTCCC.........2511.00100100000000
...................................................................................AAAG----ATCAGAGGTGTAGCTGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................GTCAGAGCAAGGCTTGTGAGA.............................................................................................................................................................................................2111.00100000010000
...........................................................................AATGTTGCAAAG----ATCAGAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTGAGATTACTA------ATT..............................................................................................................................................................................1811.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGAGACAGTACAGCT........................................................................................................................................................1911.00100010000000
..............................................................................................................................................................................................................................................................................................................................................................................................C-AGAAATGTTCACAAGTCAGAGC..........................................................................................................................................................................................................2311.00100000010000
...................................................................AAGAAAAAAATGTTGCAAAG----ATCAGAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
...........................................................................AATGTTGCAAAG----ATCAGAGGTGTAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAAATCTTGAAGTTGAGCTGGT....................2511.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAAAATCTTGAAGTTGAGCTG......................2411.00100000010000
........................................................................................................................................................................................................................TATTCAAGCTGTCGCAGAAC--T----------------------------------------------------------------------------------------------------AAAAAGT......................................................................................................................................................................................................................................................................2811.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTTGAAGTTGAGCTGGTGGCA................2411.00101000000000
.........................................................................................................................................................CTTACAA--------------------------------------CCAAGAAGAATAACA...........................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTCACTTCCCTGGAATTGCAGC.................................................2511.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATAAAATCTTGAAGTTG...........................2011.00101000000000
.....................................................................................................................................................................................................................GTATATTCAAGCTGTCGCAGAAC--T----------------------------------------------------------------------------------------------------AAAAA........................................................................................................................................................................................................................................................................2911.00100000010000
............................................................................................................................................................................................................................CAAGCTGTCGCAGAAC--T----------------------------------------------------------------------------------------------------AAAAAGT......................................................................................................................................................................................................................................................................2411.00100000010000
................................................................................................................................................ATCATAAGTCTTACAA--------------------------------------CCAA......................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................GTTCACAAGTCAGAGCAAG.......................................................................................................................................................................................................1911.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATACGG---ATGAGGATCTTCACTTC...............................................................2511.00101000000000
.............................TAAAAA---T-TTCTTTTGCTTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGACAGTACAGCTACAGTC..................................................................................................................................................2111.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGTTGAGCTGGTGGCAT...............2111.00100000010000
..............................................................................................................................................ATATCATAAGTCTTACAA--------------------------------------CCAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
droEug1
AGCAGATCAATTTGGAAAAAAAATGTTATTAGAGA---A-ATTTATTGATAGTTACATATACATCTTAAGCGATTTATTTTATAAAG----TCCAGAAGTTTAGCTGACATTCATG-----TTGCCC-------------AAC------------------------------------------------------------TACCGTCACAGTATACTCAAGCTATAGTTGACTGTT----------------------------------------------------------------------------------------------------GCGAAATTGCTTGCTT---------TCCTAATTCTGGGTAGTTT-TAAGATGTTTACAAATAAGGACCAAACTACTGAGATCGCGA------ATTCTCGCTGTGAAATGTTGCAGCTAAAATCATCATCA-----ATG-CGGGATATAGACACACAATTTAAAGT----TGCAGAAATTGAAACGG---AGGAGCATCTTCACTTCTCTCGTATAGCTGCTAAAAATAAACACTTAAAGCTTAGTTGGTGGCATTCATCTGCTGAAGTGSizeHit CountTotal NormTotal
No Reads
droBia1
AAAAGACCAAACTGTG-CTAAAATGATGCTAAAAA---T----AATTCGTGGTTTTCTATATTGCTTAAGAAAGATATTTTATAAAG----GCCAGATGTGCAGCTGACATTTCTT---GGTGACTC-------------AAATTTCTTAAGTCTTAA-A--------------------------------------CCGAATAGCATTGCAATTTGTTCAAGCTTTCGTTTA---------------------------------------------------------------------------------------------------------------CTGCTGTCAC---------TGGTAATTTGTAATTGTGTAAAAAATGTTTACTAGTCAGTACAAGTCTAC---------AG------ATTCTCGCAATGAGACGTTGCAGCTTAATTCATTACCA-----AAT-TTAGATAAAAATTCAAAATTTGATGT----TTTGGAATTTGAAACGG---AGGAGGATCTTCAGTTCCCTCAAATTGCCGCTAAAAATAAACTTTTAAAACTAAGTTGGTGGAATTCGCCAGCTGAAGTCSizeHit CountTotal NormTotal
No Reads
droTak1
AGCAGACCAAACTGTG-TTAAAATGATAATACAGA---A-ATTTATGGATGGTTTCCTATACTGCTTAAGAAAGATATTTTTTAAAG----ACCAGATGTGCAGCTGACATTATAA-----TTGCAC-------------AAATTTAATAAGTCTCAAAC--------------------------------------TCAAATATCATCACAACATATTTAAGCTGTCGTTGACTGTT----------------------------------------------------------------------------------------------------GCGAAATTACCTGCTT---------CCTTGATTTCTAATTGTTTAAAAAATGTTTACTAGTCAGGGCGAGGCTACTGAGATTGCAA------CCTCTCGAAGTGAGACTTTGCAGCTAAATTCATTACCA-----AAT-TTGACTGAAAGCTCAAAATTTAACGA----TTTAGAGTCTGAAACGC---AGGAGGATCTTCAGTTCTCTCGAATTGCTGCTAAAAATAAGCTATTGAAGCTAAGTTGGTGGCACTCGCCCGCTGAAGCTSizeHit CountTotal NormTotal
No Reads
droEle1
AGTAGGCCAAACAGAA-CTAAAATGATATTTGGGA---A-ATCAATTGTTGGTTTCATTTCCTGCTTCAGAGTGATAGTTTGTAAAG----GCCAGATGTGCAGCTGACATTAGAG-----TCGCCC-------------ACAACTTTTAAAACTCAAAA--------------------------------------CAAAATA--------------------------------------------------------------------------------------------------------------------------------------GCAAAACTACATGCTT---------TCTTAAGTTCTTACTGTTTAAAAGATGTTTACAAGCCAGGGTAAGCCTACTGAGATTGCTA------AATCTCATAGTGAGACTTTGCAGCTCAAATCATTACCA-----GAT-CTGGCTAAAAACAACAAAATTATAGA----TGTGGATGTCGAAACGG---AGAAAGATCTTCAGTTCCCTCAAATTGCTTCGAAAAATAAACTCTTGAAGCTTAGTTGGTGGCATTCACCCGCTCAAGCGSizeHit CountTotal NormTotal
No Reads
droRho1
AGTAGGCCAAACCGAA-TTAAAATGATATATGTGA---A-ATCTATTGCTAGTTTTCTATACTGCTTCAGAGTGATATTTTGTAAAG----TACTGGTGTGCAGCTGACATTATCG-----TCGCTC-------------TAACTTTTGAAGTCTCTAAA--------------------------------------CAAAATA--------------------------------------------------------------------------------------------------------------------------------------GTGAAATTACCTGCTT---------CCTCATTTCTAATTGCTTT-AAAGATGTTTACAAGTCAGGGAAACGCTAATGAAATTGCTA------TTTCTCGAAGTGAGACGTTGAAGCTAAAATCATTATCA-----GAA-CTGACTAAAAACCAAAAAAGTGGAGA----TTTGGATGTTGAATCGG---AGGATGATCTTACGTTCTCTCGAATTGCTTCTAAAAATAAACTTTTGAAGCTTAGCTGGTGGCATTCACCCACTCAAATASizeHit CountTotal NormTotal
No Reads
droFic1
GGAAAATCAAACCGTG-TTAAAATGGTATTAGTCA---A-ATTTATTGACGTTTTTTTTAACTACTTCAGGGTGGTATTTTGTAAAG----TTCAGATGCGCAGCTGACATTATAG-----GTGCCC-------------AAACTTCTTAATTCTTAAGAATAAGGA-------------------------TCA-----AATTAAGATCACAGTATATTTAAGCTATCGTCAACTGCT----------------------------------------------------------------------------------------------------GCAAAATTTCTTGCTT---------CTTCAAAACCAACCTGATTTTAAGATGTTGACGAATCAAGGCCAAGCCTCTGAGATTGCCA------GTTCTCCCAATGACGCGTTGCAGCTACAACCATTATCA-----AAT-TTGGCCAATAATTTA------ACAAA----TTCGGATTTTGAA---G---AAGAGGATCTTCGATTCTCTCGAATAGCTGATAAAAATAAACTTTTGAAACTTAGTTGGTGGCACTCCCAGGCTGCAACGSizeHit CountTotal NormTotal
No Reads
droKik1
GGCAG---------TG-CTAAAATGAAATTTATGG---A-ATTCACCACCGATCGTCTAAACTGCTTAATAATACCATTGTTAGAAG----ATCAAGTGTTCAGCTGACATTTCAGCTCGGTCACCA-------------ACATTTTCTCAGTCTTTAGT--------------------------------------GT-AAAATAAT--CAGTATGGACAC------------------------------------------------------------------------------------GTAGCAATGCTAGCCTGTAGAAAGCTCTGTTAGCAAAACTAAACCCTTCTTTTAGTTTTGTATAATTAAATTATTAGAAATATGTTTACTAATGACGA---CTCATGTGGCATTGCCATTGGCTCTACACGTACTGAGGCATTGCAGATGAATTCAATACCGCCGAAAGTAGTAACAAAAAATCTTCAATTTCGAGAC-TTGGAGGATTTTGACACTGAACAAAATAGCCCTGAGCTCTCTGGAATAGCTACAAAAAACAAATTATTAAAGCTTAATTGGTGGCATTC-------------SizeHit CountTotal NormTotal
No Reads
droAna3
TGTAAATAAAAAAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAAAC----TTCGTATTTAGATATAG---ATGAAAATATTCAGTCCTCTCGTATAGCTACCAAAAACAAAATTTTGAAGCTTAATTGGTGGCATTCGACCCATCAATTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCAGTCCTCTCGTATAGC....................................................2213.003120000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCAGTCCTCTCGTATAGCTA..................................................2411.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCAGTCCTCTCGTATAGC....................................................2111.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCAGTCCTCTCGTATAGCTACC................................................2511.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTATAGCTACCAAAAAC..........................................2011.001001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGTCCTCTCGTATAGC....................................................2011.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTTGAAGCTTAATTGGT....................2011.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAAAATTTTGAAGCTTAATTGGT....................2611.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTCCTCTCGTATAGCTACC................................................2211.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCCTCTCGTATAGCTACCAAA.............................................2411.001100000
droBip1
AAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATATTTAGATATGG---ATGAAAATAGTCAATCCTCTAAAATAGCTAACAAAAACAAACTTTTGAAGCTTAATTGGTGGCATTCGCCCAATCAATTGSizeHit CountTotal NormTotal
No Reads
droPer2
GACAAACGAAAATGCC-C----------GCAGTCA---G-ATTCTCAACGATTTCGTCTTGTTGCATCGTAGTGATTGTTTGTGAAACA-CAAGAGTTTCGTAGCTGACATTACAG-----CCACGA-------------ATATTTCCACAGAATCTACAGGAATGGTCTATTCGGCTCCCTACGTAATAAATAAAAACCCAAA--------CATATGAACAT-----------------------------------------------------------ATAATATCGGCGCATT-------------------------------------GTT-AATGATGTTCTGA-TT-------TTCTGAGTTCTTTCCTCGCTTAGAACATGTCTGTTTGTCAAAGTGAAGGCGCAGACATCGCAG------CCTCTCGTCCAGAGACGTTGCAGTTGCAATCTTTATCA-----AAC-GCTATTGTAAACTCAAGAGAGAAA----------GACTTGGATACAG---AGGAATACTATCCCTTTTCACGAATTGCTACCAAAAACAATCGCTTAAAGCTCAATTGGTGGCATTCACCCACACAACCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................G-ATTCTCAACGATTTCGTCTTGTTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2616.006600000
...............................GTCA---G-ATTCTCAACGATTTCGTCTTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2715.005500000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GACATCGCAG------CCTCTCGT.........................................................................................................................................................................1813.003300000
..........................................................................................................................................................................................................................AACAT-----------------------------------------------------------ATAATATCGGCGCATT-------------------------------------GTT-AAT..........................................................................................................................................................................................................................................................................2713.003300000
..........................................................................................................................................................................................................................................................................................................................................................................................CGCTTAGAACATGTCTGT....................................................................................................................................................................................................................1813.003300000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCAAGAGAGAAA----------GACTTG..........................................................................................2112.002200000
......................................G-ATTCTCAACGATTTCGTCTTGTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-GCTATTGTAAACTCAAGAGA..............................................................................................................2112.002200000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCAGAGACGTTGCAGTTGC......................................................................................................................................................2212.002011000
..............................................................................................................................................................................................................................................................................................................................................................GA-TT-------TTCTGAGTTCTTTCCT......................................................................................................................................................................................................................................2012.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GACATCGCAG------CCTCTCGTCCAGAGAC.................................................................................................................................................................2612.002200000
.............................................................................................................................................................................................................................AT-----------------------------------------------------------ATAATATCGGCGCATT-------------------------------------.................................................................................................................................................................................................................................................................................1812.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................CGCTTAGAACATGTCTGTTT..................................................................................................................................................................................................................2011.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................TTCCTCGCTTAGAACATGTCTGTTTG.................................................................................................................................................................................................................2611.001010000
.......................................................................................................................................................GAATCTACAGGAATGGTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
.............................................................................................................................................................................................................................................................................................................................................................................TGAGTTCTTTCCTCGCTTAGAACATGTC.......................................................................................................................................................................................................................2811.001010000
.........................................................................GATTGTTTGTGAAACA-CAAGAGTTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
....................................................................................AAACA-CAAGAGTTTCGTAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
........................................................................................A-CAAGAGTTTCGTAGCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
........................................................................................................................................................................................................................TGAACAT-----------------------------------------------------------ATAATATCGGCGC.........................................................................................................................................................................................................................................................................................................................2011.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGCAG------CCTCTCGTCCAGAGAC.................................................................................................................................................................2411.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATACAG---AGGAATACTATCC...................................................................2111.001010000
................................................................................................................................................................GGAATGGTCTATTCGGCTCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....................................................................................AACA-CAAGAGTTTCGTAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.............................................CAACGATTTCGTCTTGTTGCATCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
......................................................................................................................................................................................................................TATGAACAT-----------------------------------------------------------ATAATATCGGCGC.........................................................................................................................................................................................................................................................................................................................2211.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCGCTTAAAGCTCAATTGGT....................2311.001001000
............................................................................................................................................................................................................................................................................................AATATCGGCGCATT-------------------------------------GTT-AATGAT.......................................................................................................................................................................................................................................................................2311.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGCAG------CCTCTCGTCCAGA....................................................................................................................................................................2111.001100000
.....................................................................................AACA-CAAGAGTTTCGTAGCTGACAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
........................................................................................................................................................................................................................TGAACAT-----------------------------------------------------------ATAATATCGGCGCATT-------------------------------------GTT-.............................................................................................................................................................................................................................................................................2611.001100000
droWil2
TGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGGACTCCCTACTTTCCCCGAATCGCCACGAAAAACAACTTGTTAAAACTAAACTGGTGGCACTCACCCACTCAACCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTTTCCCCGAATCGCCA..................................................2011.00100010
droGri2
TATCGATGAA----TT-CAGCAAGGATGTTGCCATTTGACACTGGCCGCCATTTTGCAGCGCTTCCCGCATGCCGCGTGCAACACAA--GCAGCCGCTGTGCAGCTGACATATCAA---A-TTAACAAAACATAATTTCTCAACTATATAAGTATC---------------------------------------------------------------------TAGTATATAAT--TTATAAATCTCCGCCACTGTATATAAAAACAAAATAATTGACCAAAAATGTCAGCGACCCAACAGAGTGAGAGCATTACCTGTCGGTCGAATGCGCAGCCA-------------------------------------------------------------------------------------------------------G---CAATGGTGCTGCAGCCCCTGGCG-----GAC-GAAACGGGC------------AGCAG-CCGGCAAGCAGCGGAACAAG---AGGAATTATTACAATTTTCACGTATTGCCACCAAAAATAATCTTTTAAAGCTTAATTGGTGGCACTCACC----------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 05:41 AM