ID:

dsi_3823

 Coordinate:

x:16631287-16631436 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.2 -10.2 -10.1 -10.1

Flybase annnotation

CDS [x_16630776_16631286_-]; exon [x_16630300_16631286_-]; intron [x_16631287_16632555_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACCGAAAATAAACTAAGAATACAAACTAAGAATGGCAATCTCTAATAGTTTCGCAAATTTTGCCATATAAAACATATCAATGTGGCAATACGTCGAATAGGTCTTTAAATTTAGTTGCCACTGCATTCAGAAGGGCAGCCAACATGCAGATGAAACCGCCTACGACTGGTTACCTTGACCCAATTGAAATCCATTTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTCCTTTCGATTCTGCTGG
******************************************************************************************************************..................(((..................(((((........))))).......)))********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 O001
Testis
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
......................................................................................................................................................................................................................CCATTCCCGGATCGCTGTTCC............... 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TTCCCGGATCGCTGTTCC............... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TTTCGATGCCACTGCTTTCAGA....................................................................................................................... 22 3 2 1.00 2 0 0 0 0 0 2 0 0 0 0
..................................................................................................................................................................................................................TTCGCCATTCCCGGATCG...................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................AATACGTCGAATAGGTCC.................................................................................................................................................. 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................ACGACTAGTTACGTTGAC....................................................................... 18 2 2 1.00 2 0 0 0 0 0 0 2 0 0 0
.....................CGAACTAAGAATGGCAATCT................................................................................................................................................................................................................. 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................CGACTGGTTACCTTGACCC..................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................ACATTCGCCATTCCCGGATCGC..................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
............................ATACTGGCAATCTCTAATAGTTTCGG.................................................................................................................................................................................................... 26 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0
..................................................................................................................TTGCCACTGCATTCAGAAGGG................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................GATGAAACCGCCTACGACTG.................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CATTCCCCATTCCCGGATCGCTGT.................. 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................TACGACTGGTTACCTTGACCC..................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................GCCAACATGCAGATGAAAACGC........................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.................................................................................GTAGCAATACGACGTATAGG..................................................................................................................................................... 20 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1
.........................................................................................................................................GGAAACATGCAGATGAAACCGT........................................................................................... 22 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0
....................................................................................GCAATACGACGTATAGG..................................................................................................................................................... 17 2 6 0.17 1 0 0 0 0 0 0 0 0 0 1
.................................................................................GTAGCAATACGACGTATAG...................................................................................................................................................... 19 3 7 0.14 1 0 0 0 0 0 0 0 0 0 1
........................................................................................................TTAAACTTAGTTGCCA.................................................................................................................................. 16 1 9 0.11 1 0 0 0 0 0 1 0 0 0 0
..............................AATCGCATTCTCTAATA........................................................................................................................................................................................................... 17 2 20 0.10 2 0 0 0 0 0 0 0 0 0 2
........................................................................................................................................................................................................................ATTACCGAATCGGTGTTCC............... 19 3 13 0.08 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................CATTCCCGGTTCGCTCT.................. 17 2 13 0.08 1 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TGGCTTTTATTTGATTCTTATGTTTGATTCTTACCGTTAGAGATTATCAAAGCGTTTAAAACGGTATATTTTGTATAGTTACACCGTTATGCAGCTTATCCAGAAATTTAAATCAACGGTGACGTAAGTCTTCCCGTCGGTTGTACGTCTACTTTGGCGGATGCTGACCAATGGAACTGGGTTAACTTTAGGTAAATATCGGACGTTTGTAAGCGGTAAGGGCCTAGCGACAAGGAAAGCTAAGACGACC
*********************************************************************..................(((..................(((((........))))).......)))****************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M023
head
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
..........................................................................................GCAGCTTATCCAGAAATTT............................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................TACACCGTTATGCAGCTTAT....................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................CAACGGTGACGAAAGTTTTGC.................................................................................................................... 21 3 6 0.17 1 0 0 0 1 0 0 0 0
................GTTATGCTTGACTCTTACCG...................................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 0 0 1 0 0
...................................................................................................................................TCCGGTCGGTTGGATGTCTA................................................................................................... 20 3 7 0.14 1 0 0 0 0 1 0 0 0
......................................AGAGGTTATCAACTCGTTTA................................................................................................................................................................................................ 20 3 11 0.09 1 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................GCGGCAAGGACCTAGCGAGA.................. 20 3 15 0.07 1 0 0 1 0 0 0 0 0
...................AGGTTTGATTCTTGCCGGTA................................................................................................................................................................................................................... 20 3 19 0.05 1 0 0 0 0 0 0 1 0
..............................................................................................................................................................CGATGCTGGCTAATGGAA.......................................................................... 18 3 20 0.05 1 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................CGATAAGGGCCAAGCGAG................... 18 3 20 0.05 1 0 0 0 0 0 0 0 1
.................TTATGTTTGACTCTT.......................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 1
.....................GCTTGATTCTTACCG...................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 1 0 0 0 0 0
......................................................................................................................................................................ACCATTGGAAATGGGT.................................................................... 16 2 20 0.05 1 0 0 1 0 0 0 0 0
........................................................AAAAACGGTATATTGTGT................................................................................................................................................................................ 18 2 20 0.05 1 0 0 1 0 0 0 0 0
............................................................................................................................................................GCCGGTGCTGACCAAT.............................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:16631237-16631486 - dsi_3823 ACCGA------------------------------------------------AA-------ATAAACTAAGAATACAAACTAAGAA---TGGCAATCT--------------------------------------------------------------------------------------------------------------------------CTAATAGTTTCGCAA-------------------------------ATTTTGCCATATAAAACATATCAATGT-GGCAATA--CGTCGAATAGGT----------CTTTAAAT----------TTAGTTGCCACTGCAT-TCAG--AAGGGCAGCCA-ACATG-----CAGATGAAACCGCCTAC----GACTGGTTACCTTGACCCAA-----TTGAAATCCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTCCTTTCGATTCTGCTGG
droSec2 scaffold_17:1360977-1361216 - ACCGA------------------------------------------------AA-------ATAAACTAAGAATAC-------------TGGCAATCT--------------------------------------------------------------------------------------------------------------------------CTAATAGTTTCGCTA-------------------------------ATTTTGCCATATAAAACATATCAATGT-GGCAATA--CGTCGAATAGGT----------CTTTAATT----------TTAGTTGCCACTGCAT-TCAG--AATGGCAGCCA-ACATT-----CAGATGAAACCGCCTAC----GACTGGTTACCTTGACCCAA-----TTGAAATCCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTCCTTTCGATTCTGCTGG
dm3 chrX:17518189-17518426 - CCAAA------------------------------------------------AA-------ATAAACAAAGAATAC-------------TGGCAATCTCCTAAAACA---------------------------------------------------------------------TC---------------------------------------TCTCTAATAGTTTCGCTA-------------------------------ATTTTGCCATATAAAACATATCAATGT-GGCAATA--CGTCGAATAGGT----------CATTAAAT----------TTAGTTGCCACTGCA---------------GGTA-----T-----CAGATGAAACCGCCTAC----GACTGGTTACCTTGACCCAA-----TTGAAATCCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTCCTCTCGATTCTGCTGG
droEre2 scaffold_4690:7854349-7854581 - CCAGG------------------------------------------------AAAAAAAAA---TACGTTGAATAC-------------TCGCAATCTCTTAGAAAA---------------------------------------------------------------------TC-----------------------------------------TGTAATAGTTTTGCTA-------------------------------TTTTTGGCATATAAA-----------------GTA--GATCGATTAGGT----------CTTCAAAT----------TTAGTTGCCACTGCAT-TCAA--A-G------TG-TAATG-----CAGATGAAACCGCCTAC----GACTGGTTACCTTGACCCAA-----TTGAAATCCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTTCTCTCGATTCTGCTCG
droYak3 X:16145129-16145369 - ATCAA------------------------------------------------AAAAAGAAA---AACTCAGAGTAT-------------TTGCAATCACTTAAAACA---------------------------------------------------------------------TC-----------------------------------------TGTAATGGTTTAGCTA-------------------------------TTTTTT-----------------ATGTAAGCAATA--TGTCGATTAGGT----------CTTTAAAT----------TCAGTTGCCACTGCAT-TGAA--AAGTGCAGCTAAATATT-----CAGATGAAACCGCCTAC----GACTGGTTACCTTGACCCAA-----TTGAAATCCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTTCTATCGATTCTGCTCG
droEug1 scf7180000409271:587864-588098 - GGGAA------------------------------------------------AA-------AT--------------------------------T---------------------------------------------------------------------------------C-----------------------------------------TATAAAAATTTTAGAAGTAAAAAAAAGAAGCACCTGAAG-TAGGCTTTTTTAGG---------------------AGTAATTTTAGTCAAAGAAAC----------CTTTAAAT----------TGAGTTACCACTGTAT-AGAAGAAAATGCAGCTT-TTATT-----CAGATTGAACCGCCTAC----GATTGGTTGCCTTGACCCAA-----TTGACATCCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTTCTGTCGATTCTACTCG
droBia1 scf7180000301760:3534780-3535053 - ACCGG------------------------------------------------AG-------CTATGTTTGGGATGC-------------T--------TCTAGATCAGGGTTGGGTTTAAATGTTTTTATATAATTTTTTTGCATTTTATTGGGCTGTAAGAAGGGAAATTATAATTAT----TTATA------------------------------CCT---------------TAAAAAT-ATAAAATTTG--------------------------------------------------------------------------TGGGT----------TCGGCTGCCACTGTAT-CGAG--AAATGCAGCTA-GTATT-----CAGATCGAACCGCCCAC----GACTGGTTGCCTTGACCCAT-----TTGAAACCCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTTCTGTCGATTCTGCTCG
droTak1 scf7180000415210:512313-512469 + G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAATC----------CATCAAAT----------TCAACTCTCACTGTATCAAAA--AAATGCAGCTA-TTATT-----CAGATCGAACCGCCTAC----GACTGGTTGCCTTGACCCAA-----TTGAAATCCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTTCTGTCGATTCTACTCG
droEle1 scf7180000491001:217655-217889 + ACCAA------------------------------------------------AATAGAAAA---AATT-------------------------------------------------------------------------------------------------------------AT----ATATATTTTAAA-----------------TCATGTCAT---------------TAAAAAT-GTAAGCTTTGAAATATAAGCTTT--------------------C---------AAT-----------------------TCCTTTGAATTGACGCTTAGTGGGGTGCCACTGTAC-AAAA--TAATTCAGCCA-TTATT-----CAGATCGAACCGCCTGC----GACTGGTTGCCTTGACCCAA-----TTGAAATTCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTTCTGTCGATTCTACTCG
droRho1 scf7180000779333:743548-743863 - AACCAATGAGTAAAACCAGAATTTTAAAAATTTTTTCGATTGATAAGCAAAAAAC-------AACAACAT-------------------------------------------------------------------------------------------------------------------------ATATATATATATATATTTGTATATATACCAT---------------TAT-TAT-TTAGACACTTAAAGATAAGCTTT--------------------CCATAT-GGGAACA--TGCTTAAGAACCCTTTTAAATCCAAGGAATTGACTGTTAACCAGGTATCACTGTAC-ATAA--TAATTCAGCTA-TTATT-----CAGATCGAACCGCCTGC----GACTGGTTGCCTTGACCCAA-----TTGAAATTCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTTCTGTCGATTCTACTCG
droFic1 scf7180000454077:681290-681545 + ATTGA------------------------------------------------AC-------AACAGCAAGAGCCGAAAACTGAA-GTGTTTTGAATAT-------CAAGCAGTT---------------------------------------------------------------ATCGAAATATTTTTTAAA-----------------T-ATG----------------------------------------TATAAACT--------------------TTTAGTG--GGTTACG--AGCTGAAGCATA----------CCCTTAAT----------TTAGTGACTACTGTAT-ACAA--AAATGCAGCTA-TTATT-----CAGATCGAACCGCCTGC----GACTGGTTGCCTTGACCCAA-----TTGATATCCAT---TTACAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTTTTGTCGATTCTGCTTG
droKik1 scf7180000302592:1547846-1547960 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCA-CTATT-----CAGATCAAACCGCCTGC----GACTGGTTGCCTTGACCTAA-----TTGAAATCCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTCTTGTCGATTCTGCTTG
droAna3 scaffold_13248:1836002-1836099 + A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCACCTTG----AACTGGTTACCTTGACCCCC-----TCGACATTCCC---ATATAGCCTACAAACATTCGCCATTCCCGGATCACTGTTCCTGTCGATTCTGCTCG
droBip1 scf7180000395544:25995-26117 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACTGTAT-TT-----------GACA-ATATT-----CTGTTGAAACCACCTTG----AACTGGTTGCCTTGACCCCC-----CATAA----AATTCCTATAGCCTACAAACATTCGCCATTCCCGGATCGCTGTTCCTGTCGATTCTTCTCG
dp5 XL_group1e:4455193-4455314 + GTCGA------------------------------------------------AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTATATCA-----GATCG--TATGATTGGTTGGATGCCTTAACTCGCTCTTAACAA-TTTCTTCTCGTACAGCCTACAAACATTCGCCATTCCCGGTTCACTATTCCTGTCGATTTTACTCG
droPer2 scaffold_17:1398197-1398251 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAGCCTACAAACATTCGCCATTCCCGGTTCACTATTCCTGTCGATTTTACTCG
droWil2 scf2_1100000004909:10187677-10187756 - A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGTTTCCATAACTTGA-----T------TTCG---TTGTAGCCTACAAACTTTTGCCATTCCTGGTTCATTATTCCTATCGATATTACTTG
droVir3 scaffold_12970:5610854-5610936 + A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGTTGCCTTAACTGAA-----C-G-----TGTTTTATATAGCCTACAAACATTTGCCATTCCTGGTTCGTTATTCCTGTCGATCTTGCTTG
droMoj3 scaffold_6473:16051187-16051290 - ACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-----CATATACATCTTACTTG----AATTGGTTGCCTTAACT----------GAACGCGTT---CTCTAGCCTACAAACATTTGCCATTCCTGGGTCGTTATTCCTGTCGATCTTACTTG
droGri2 scaffold_15203:9768269-9768350 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTTAACTT----TAA-----TTGA-ATACGTTTCAAATAGCCTACAAACATTCGCCATTCCTGGCTCGTTATTCCTGTCAATCTTACTTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACCGA------------------------------------------------AA-------ATAAACTAAGAATACAAACTAAGAA---TGGCAATCT--------------------------------------------------------------------------------------------------------------------------CTAATAGTTTCGCAA-------------------------------ATTTTGCCATATAAAACATATCAATGT-GGCAATA--CGTCGAATAGGT----------CTTTAAAT----------TTAGTTGCCACTGCAT-TCAG--AAGGGCAGCCA-ACATG-----CAGATGAAACCGCCTAC----GACTGGTTACCTTGACCCAA-----TTGAAATCCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTCCTTTCGATTCTGCTGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTCCCGGATCGCTGTTCC...............2112.00200000000200000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCGGATCGCTGTTCC...............1811.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCCATTCCCGGATCG......................1811.00110000000000000000
..........................................................................................................................................................................................................................................................................................................AATA--CGTCGAATAGGT----------CC.................................................................................................................................................................................1811.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................C----GACTGGTTACCTTGACCC.............................................................................1911.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTCGCCATTCCCGGATCGC.....................2211.00100001000000000000
............................................................................................................................................................................................................................................................................................................................................................TTGCCACTGCAT-TCAG--AAGGG.....................................................................................................................................2111.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GATGAAACCGCCTAC----GACTG..........................................................................................2011.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAC----GACTGGTTACCTTGACCC.............................................................................2111.00110000000000000000
droSec2
ACCGA------------------------------------------------AA-------ATAAACTAAGAATAC-------------TGGCAATCT--------------------------------------------------------------------------------------------------------------------------CTAATAGTTTCGCTA-------------------------------ATTTTGCCATATAAAACATATCAATGT-GGCAATA--CGTCGAATAGGT----------CTTTAATT----------TTAGTTGCCACTGCAT-TCAG--AATGGCAGCCA-ACATT-----CAGATGAAACCGCCTAC----GACTGGTTACCTTGACCCAA-----TTGAAATCCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTCCTTTCGATTCTGCTGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................................................................................................................A-ACATT-----CAGATGAAACCG........................................................................................................1811.0010001
..................................................................................................................................................................................................................................................................................................................................................................................................................CTAC----GACTGGTTACCTTGACC..............................................................................2111.0011000
dm3
CCAAA------------------------------------------------AA-------ATAAACAAAGAATAC-------------TGGCAATCTCCTAAAACA---------------------------------------------------------------------TC---------------------------------------TCTCTAATAGTTTCGCTA-------------------------------ATTTTGCCATATAAAACATATCAATGT-GGCAATA--CGTCGAATAGGT----------CATTAAAT----------TTAGTTGCCACTGCA---------------GGTA-----T-----CAGATGAAACCGCCTAC----GACTGGTTACCTTGACCCAA-----TTGAAATCCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTCCTCTCGATTCTGCTGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAACATTCGCCATTCCCGGATCGC.....................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................TAC-------------TGGCAATCTCCTAAAACA---------------------------------------------------------------------TC---------------------------------------TCTC...........................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCCATTCCCGGATCGCTGTTCC...............2514.0040000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAC----GACTGGTTACCTTGACCCAA-----TTGAAA................................................................2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCGCCATTCCCGGATCGCTGT..................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000200000
...............................................................................................................................................................................................................................................................................................TCAATGT-GGCAATA--CGTCGAATAGG..............................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................TTTGCCATATAAAACATATCAATGT-GGCAA.............................................................................................................................................................................................................3012.0020000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCGCCATTCCCGGATCGCTGTTCC...............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACATTCGCCATTCCCGGATCGCTG...................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000
............................................................................................................................................................................................................................................................................................................TA--CGTCGAATAGGT----------CATTAAAT----------TTAGT............................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCCATTCCCGGATCGCTGTTCCTC.............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCGGATCGCTGTTCCTCTCGATAAA.....2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TAAAACA---------------------------------------------------------------------TC---------------------------------------TCTCTAATAGTTTCGC...............................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATTCCCGGATCGCTGTTCCTCTCG..........2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................TAAACAAAGAATAC-------------TGGCAATCTCCTAA.................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TCAATGT-GGCAATA--CGTCGAATAGGT----------...................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCCATTCCCGGATCGCTGTTC................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGATCGCTGTTCCTCTCGATTCTGC...2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................A-----TTGAAATCCAT---TTATAG..................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TGCA---------------GGTA-----T-----CAGATGAAACCGCCTAC----...............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AGATGAAACCGCCTAC----GACTGGT........................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TCCTAAAACA---------------------------------------------------------------------TC---------------------------------------TCTCTAAT.......................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTCGATTCTGCTGG1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................ACA---------------------------------------------------------------------TC---------------------------------------TCTCTAATAGTTTCGCTA-------------------------------ATTTT.........................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GCAATA--CGTCGAATAGGT----------CA.................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CTAC----GACTGGTTACCTTGACCCAA-----TTGAA.................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TGT-GGCAATA--CGTCGAATAGGT----------CATT...............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TAGTTGCCACTGCA---------------GGTA-----T-----CAGATGAA............................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCGGATCGCTGTTCCTCTCGAT........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................ATAAACAAAGAATAC-------------TGGCAATCTCC....................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................ATA--CGTCGAATAGGT----------CATTAAAT----------TTAGT............................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TAGGT----------CATTAAAT----------TTAGTTGCCACTGCA---------------GG.................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCAAACATTCGCCATTCCCGGATC.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TCAATGT-GGCAATA--CGTCGAA..................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................AAAT----------TTAGTTGCCACTGCA---------------GGTA-----T-----CAGA................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCATTCCCGGATCGCTG...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................ATGT-GGCAATA--CGTCGAATAGGT----------CA.................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCGCCATTCCCGGATCGCTGTTC................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAT---TTATAGCCTGCAAACATTCGC...................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TAAAACATATCAATGT-GGCAATA--CGTCGAA..................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................AAT----------TTAGTTGCCACTGCA---------------GGTA-----T-----CAG.................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTGTTCCTCTCGATT.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAC----GACTGGTTACCTTGACCCAA-----TTGA..................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTGTTCCTCTCGATTCTGCTGG2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCCCGGATCGCTGTTCCTCTCG..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................CAATCTCCTAAAACA---------------------------------------------------------------------TC---------------------------------------TCTC...........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................A---------------GGTA-----T-----CAGATGAAACCGCC......................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCCGGATCGCTGTTCCTCT............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................................................................................................................................................................................................................................................................................................................TTAGTTGCCACTGCA---------------GGTA-----T-----CAGATGAA............................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGGATCGCTGTTCCTCTCGATT.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TCTCCTAAAACA---------------------------------------------------------------------TC---------------------------------------TCTCTAATAGTT...................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAC----GACTGGTTACCTTGACCCAA-----TTGAA.................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCTTGACCCAA-----TTGAAAT...............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AATAGTTTCGCTA-------------------------------ATTTTGCCATATAAAAC.............................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................CATATAAAACATATCAATGT-GGCAATA--.........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AATA--CGTCGAATAGGT----------CATTAAAT----------T................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCCATTCCCGGATCGCTG...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................TATCAATGT-GGCAATA--CGTCGAATAGGT----------...................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................AAT----------TTAGTTGCCACTGCA---------------GGTA-----T-----CAGAA...............................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGCCTGCAAACATTCGCCATTCCCGG..........................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGGATCGCTGTTCCTCTCGATTCTG....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCCGGATCGCTGTTCC...............1911.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTACCTTGACCCAA-----TTGAAATCCAT---T.......................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGGCAATCTCCTAAAACA---------------------------------------------------------------------TC---------------------------------------TCTC...........................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCCAA-----TTGAAATCCAT---TTATA...................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................AATGT-GGCAATA--CGTCGAATAGGT----------...................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................ATATCAATGT-GGCAATA--CGTCGAATAGGT----------...................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AT----------TTAGTTGCCACTGCA---------------GGTA-----T-----C...................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................GTTGCCACTGCA---------------GGTA-----T-----CAG.................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
CCAAA------------------------------------------------AA-------ATAAACAAAGAATAC-------------TGGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCCGGATCGCTGTTCCTCTCGA.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCGGATCGCTGTTCCTCT............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCATTCCCGGATCGCTGTTCCTC.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................TGCA---------------GGTA-----T-----CAGATGAAACCGCC......................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCCAA-----TTGAAATCCAT---TTATAGCC................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCATTCCCGGATCGCT....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TCTCCTAAAACA---------------------------------------------------------------------TC---------------------------------------TCTCT..........................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCGGATCGCTGTTCCTCTCGAT........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TCTCTAATAGTTTCGCTA-------------------------------ATT...........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................ACCGCCTAC----GACTGGTTACCTTGACC..............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TATCAATGT-GGCAATA--CGTCGAATAGG..............................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCCATTCCCGGATCGCTGT..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................ACTGCA---------------GGTA-----T-----CAGATGAAACCG........................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCGCCATTCCCGGATCGCTGTTCCTC.............2911.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................ATGT-GGCAATA--CGTCGAAT.................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CCAGG------------------------------------------------AAAAAAAAA---TACGTTGAATAC-------------TCGCAATCTCTTAGAAAA---------------------------------------------------------------------TC-----------------------------------------TGTAATAGTTTTGCTA-------------------------------TTTTTGGCATATAAA-----------------GTA--GATCGATTAGGT----------CTTCAAAT----------TTAGTTGCCACTGCAT-TCAA--A-G------TG-TAATG-----CAGATGAAACCGCCTAC----GACTGGTTACCTTGACCCAA-----TTGAAATCCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTTCTCTCGATTCTGCTCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTTACCTTGACCCAA-----TTGAA.................................................................2011.0010100000
droYak3
ATCAA------------------------------------------------AAAAAGAAA---AACTCAGAGTAT-------------TTGCAATCACTTAAAACA---------------------------------------------------------------------TC-----------------------------------------TGTAATGGTTTAGCTA-------------------------------TTTTTT-----------------ATGTAAGCAATA--TGTCGATTAGGT----------CTTTAAAT----------TCAGTTGCCACTGCAT-TGAA--AAGTGCAGCTAAATATT-----CAGATGAAACCGCCTAC----GACTGGTTACCTTGACCCAA-----TTGAAATCCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTTCTATCGATTCTGCTCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCCATTCCCGGATCGCT....................2111.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................ATGAAACCGCCTAC----GACTGG.........................................................................................2011.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTCGCCATTCCCGGATCGC.....................2211.00101000000000
droEug1
GGGAA------------------------------------------------AA-------AT--------------------------------T---------------------------------------------------------------------------------C-----------------------------------------TATAAAAATTTTAGAAGTAAAAAAAAGAAGCACCTGAAG-TAGGCTTTTTTAGG---------------------AGTAATTTTAGTCAAAGAAAC----------CTTTAAAT----------TGAGTTACCACTGTAT-AGAAGAAAATGCAGCTT-TTATT-----CAGATTGAACCGCCTAC----GATTGGTTGCCTTGACCCAA-----TTGACATCCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTTCTGTCGATTCTACTCGSizeHit CountTotal NormTotal
No Reads
droBia1
ACCGG------------------------------------------------AG-------CTATGTTTGGGATGC-------------T--------TCTAGATCAGGGTTGGGTTTAAATGTTTTTATATAATTTTTTTGCATTTTATTGGGCTGTAAGAAGGGAAATTATAATTAT----TTATA------------------------------CCT---------------TAAAAAT-ATAAAATTTG--------------------------------------------------------------------------TGGGT----------TCGGCTGCCACTGTAT-CGAG--AAATGCAGCTA-GTATT-----CAGATCGAACCGCCCAC----GACTGGTTGCCTTGACCCAT-----TTGAAACCCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTTCTGTCGATTCTGCTCGSizeHit CountTotal NormTotal
No Reads
droTak1
G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAATC----------CATCAAAT----------TCAACTCTCACTGTATCAAAA--AAATGCAGCTA-TTATT-----CAGATCGAACCGCCTAC----GACTGGTTGCCTTGACCCAA-----TTGAAATCCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTTCTGTCGATTCTACTCGSizeHit CountTotal NormTotal
No Reads
droEle1
ACCAA------------------------------------------------AATAGAAAA---AATT-------------------------------------------------------------------------------------------------------------AT----ATATATTTTAAA-----------------TCATGTCAT---------------TAAAAAT-GTAAGCTTTGAAATATAAGCTTT--------------------C---------AAT-----------------------TCCTTTGAATTGACGCTTAGTGGGGTGCCACTGTAC-AAAA--TAATTCAGCCA-TTATT-----CAGATCGAACCGCCTGC----GACTGGTTGCCTTGACCCAA-----TTGAAATTCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTTCTGTCGATTCTACTCGSizeHit CountTotal NormTotal
No Reads
droRho1
AACCAATGAGTAAAACCAGAATTTTAAAAATTTTTTCGATTGATAAGCAAAAAAC-------AACAACAT-------------------------------------------------------------------------------------------------------------------------ATATATATATATATATTTGTATATATACCAT---------------TAT-TAT-TTAGACACTTAAAGATAAGCTTT--------------------CCATAT-GGGAACA--TGCTTAAGAACCCTTTTAAATCCAAGGAATTGACTGTTAACCAGGTATCACTGTAC-ATAA--TAATTCAGCTA-TTATT-----CAGATCGAACCGCCTGC----GACTGGTTGCCTTGACCCAA-----TTGAAATTCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTTCTGTCGATTCTACTCGSizeHit CountTotal NormTotal
No Reads
droFic1
ATTGA------------------------------------------------AC-------AACAGCAAGAGCCGAAAACTGAA-GTGTTTTGAATAT-------CAAGCAGTT---------------------------------------------------------------ATCGAAATATTTTTTAAA-----------------T-ATG----------------------------------------TATAAACT--------------------TTTAGTG--GGTTACG--AGCTGAAGCATA----------CCCTTAAT----------TTAGTGACTACTGTAT-ACAA--AAATGCAGCTA-TTATT-----CAGATCGAACCGCCTGC----GACTGGTTGCCTTGACCCAA-----TTGATATCCAT---TTACAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTTTTGTCGATTCTGCTTGSizeHit CountTotal NormTotal
No Reads
droKik1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCA-CTATT-----CAGATCAAACCGCCTGC----GACTGGTTGCCTTGACCTAA-----TTGAAATCCAT---TTATAGCCTGCAAACATTCGCCATTCCCGGATCGCTGTTCTTGTCGATTCTGCTTGSizeHit CountTotal NormTotal
No Reads
droAna3
A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCACCTTG----AACTGGTTACCTTGACCCCC-----TCGACATTCCC---ATATAGCCTACAAACATTCGCCATTCCCGGATCACTGTTCCTGTCGATTCTGCTCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCGGATCACTGTTCCTG.............1911.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGGATCACTGTTCCTGT............1911.001100000
droBip1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACTGTAT-TT-----------GACA-ATATT-----CTGTTGAAACCACCTTG----AACTGGTTGCCTTGACCCCC-----CATAA----AATTCCTATAGCCTACAAACATTCGCCATTCCCGGATCGCTGTTCCTGTCGATTCTTCTCGSizeHit CountTotal NormTotal
No Reads
dp5
GTCGA------------------------------------------------AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTATATCA-----GATCG--TATGATTGGTTGGATGCCTTAACTCGCTCTTAACAA-TTTCTTCTCGTACAGCCTACAAACATTCGCCATTCCCGGTTCACTATTCCTGTCGATTTTACTCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCGGTTCACTATTCCTGT............2111.0010100000000
droPer2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAGCCTACAAACATTCGCCATTCCCGGTTCACTATTCCTGTCGATTTTACTCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCCGGTTCACTATTCCTG.............2111.001010000
droWil2
A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGTTTCCATAACTTGA-----T------TTCG---TTGTAGCCTACAAACTTTTGCCATTCCTGGTTCATTATTCCTATCGATATTACTTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCATAACTTGA-----T------TTCG---TTGTAG..................................................2513.00330000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCATAACTTGA-----T------TTCG---TTGTAG..................................................2412.00220000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCCATTCCTGGTTC.......................1811.00101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCCATAACTTGA-----T------TTCG---TTGTAG..................................................2711.00110000
droVir3
A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGTTGCCTTAACTGAA-----C-G-----TGTTTTATATAGCCTACAAACATTTGCCATTCCTGGTTCGTTATTCCTGTCGATCTTGCTTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTTAACTGAA-----C-G-----TGTTTTATATAG..................................................2713.003000010000000000000000000000020000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGTTCGTTATTCCTG.............1811.001000000000000000000000000000010000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCTTAACTGAA-----C-G-----TGTTTTATATAT..................................................2811.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAACATTTGCCATTCCT............................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCCATTCCTGGTTCGTT....................2011.001000000000000000000000000000000000001000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCCATTCCTGGTTCGTT....................2111.001000001000000000000000000000000000000000000000000000000000000000
droMoj3
ACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-----CATATACATCTTACTTG----AATTGGTTGCCTTAACT----------GAACGCGTT---CTCTAGCCTACAAACATTTGCCATTCCTGGGTCGTTATTCCTGTCGATCTTACTTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTACAAACATTTGCCATTCCTGGGTC.......................2711.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCATTCCTGGGTCGTTA...................2011.001000001
droGri2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTTAACTT----TAA-----TTGA-ATACGTTTCAAATAGCCTACAAACATTCGCCATTCCTGGCTCGTTATTCCTGTCAATCTTACTTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCCTGGCTCGTTATTCCTG.............2211.00110

Generated: 05/18/2015 at 09:39 AM