ID:

dsi_382

 Coordinate:

2l:23094578-23094631 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.0

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
BATUMI_I-intLTRPao-
mature
  1. dsi_383  2l:22164665-22164687 -
  2. dsi_382  2l:23094608-23094630 +
  3. 3l:23916413-23916435 +
  4. 3l:24131768-24131790 -
  5. x:20174406-20174428 +
  6. x:20301021-20301043 -
  7. node_24141:1012-1034 -
  8. node_122972:71-93 +
  9. node_78413:1229-1251 +
  10. node_93853:1528-1550 -
  11. node_69035:1-23 -
  12. node_36832:3892-3914 -
  13. node_94381:66-88 -
  14. node_20880:3455-3477 -
  15. node_45153:1919-1941 +
  16. node_51006:694-716 -
star

Sense Strand Reads

ATTACCTTTAATTGCCTTTTGTCGGAGAAATCCGTTAGATCTGACAATAAATCTGACAGCAAATTGAACAAAATTGAATGTTCGAACCTTTTGCTGCAGACCGGCAACTAAAAGGAATGGAGATTTCGTACTTATTTTATAAGTTGGTCGCTGA
***********************************................((((.((((((((((((((........)))))))....)))))))))))...................*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 O001
Testis
 O002
Head
 M053
female body
 M025
embryo
 GSM343915
embryo
 M024
male body
................................................................................TTCGAACCTTTTGCTGCAGACCG................................................... 23 0 16 331.75 5308 3385 1792 20 18 48 20 16 0 0 6 3 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGG.................................................. 24 0 14 319.29 4470 2817 840 144 74 355 172 34 0 0 18 16 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGGC................................................. 25 0 14 77.50 1085 277 60 159 46 238 236 30 0 0 27 9 3 0
...............................................................................GTTCGAACCTTTTGCTGCAGACCGG.................................................. 25 0 4 70.25 281 247 12 8 5 7 0 0 0 0 1 1 0 0
................................................................................TTCGAACCTTCTGCTGCAGACCG................................................... 23 1 16 56.56 905 793 90 15 6 1 0 0 0 0 0 0 0 0
........TAATTGCCTTTTGTCGGAGAAATC.......................................................................................................................... 24 0 8 39.38 315 1 0 185 120 4 0 4 0 0 0 0 1 0
...................................TAGATCTGACAATAAATCTGACAGCAAAT.......................................................................................... 29 0 4 36.75 147 0 0 86 56 5 0 0 0 0 0 0 0 0
............TGCCTTTTGTCGGAGAAATCCGTTAGA................................................................................................................... 27 0 9 33.89 305 5 0 135 37 42 83 3 0 0 0 0 0 0
................................................................................TTCGAACCTTCTGCTGCAGACCGGC................................................. 25 1 14 33.29 466 96 3 253 102 10 2 0 0 0 0 0 0 0
................................................................................TTCGAACCTTCTGCTGCAGACCGG.................................................. 24 1 14 29.64 415 254 19 83 54 4 0 1 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGT.................................................. 24 1 15 26.20 393 235 156 0 1 0 0 1 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACC.................................................... 22 0 16 21.75 348 198 115 7 5 6 5 1 0 0 1 9 0 1
........TAATTGCCTTTTGTCGGAGAAATCC......................................................................................................................... 25 0 8 19.50 156 0 0 130 24 2 0 0 0 0 0 0 0 0
.........................................TGACAATAAATCTGACAGCAAATTGAA...................................................................................... 27 0 5 16.20 81 70 9 0 1 0 0 1 0 0 0 0 0 0
................................................................................TTCGAACCTTCTGCTGCAGACCGGCAA............................................... 27 1 13 14.92 194 138 1 25 28 2 0 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTGCAGACCG................................................... 24 0 5 14.20 71 57 9 2 3 0 0 0 0 0 0 0 0 0
...................................TAGATCTGACAATAAATCTGACAGC.............................................................................................. 25 0 4 14.00 56 0 0 19 31 6 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGA.................................................. 24 1 15 12.33 185 95 89 0 0 0 1 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGAC..................................................... 21 0 16 11.25 180 47 84 0 0 0 2 0 40 0 1 6 0 0
.......................................TCTGACAATAAATCTGACAGCAAAT.......................................................................................... 25 0 5 10.20 51 43 7 0 0 0 0 0 0 0 1 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGGCA................................................ 26 0 14 10.00 140 50 3 27 10 11 30 3 0 0 6 0 0 0
..............................................................................TGTTCGAACCTTTTGCTGCAGACCGGC................................................. 27 0 4 7.25 29 12 0 7 5 1 3 1 0 0 0 0 0 0
................................................................................TTCGAACCTTCTGCTGCAGACCGGCA................................................ 26 1 14 7.00 98 87 1 6 4 0 0 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTGCAGACCGGC................................................. 26 0 4 6.75 27 12 0 6 2 5 2 0 0 0 0 0 0 0
........TAATTGCCTTTTGTCGGAGAAATCCGTTAGA................................................................................................................... 31 0 8 6.38 51 0 0 49 0 0 2 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGGA................................................. 25 1 14 6.36 89 50 36 0 0 2 0 0 0 0 1 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACTGGC................................................. 25 1 14 5.71 80 0 4 5 5 28 38 0 0 0 0 0 0 0
................................................................................TTCGAACCTTCTGCTGCAGACC.................................................... 22 1 16 5.50 88 79 4 2 3 0 0 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTGCAGACCGT.................................................. 25 1 4 5.50 22 20 2 0 0 0 0 0 0 0 0 0 0 0
....................................AGATCTGACAATAAATCTGACAGCAAAT.......................................................................................... 28 0 4 5.25 21 0 0 2 15 2 2 0 0 0 0 0 0 0
............................................................................................................TAAAAGGAATGGAGATTTCGTACT...................... 24 0 4 4.50 18 0 0 5 4 3 0 5 0 0 0 1 0 0
................................................................................TTCGAACCTTTTGCTGCAGAACGGC................................................. 25 1 14 4.36 61 0 2 37 18 2 1 0 0 0 0 0 0 1
.......................................TCTGACAATAAATCTGACAGCAAATT......................................................................................... 26 0 5 4.20 21 14 7 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACTG................................................... 23 1 16 4.19 67 0 63 0 1 3 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGGCAA............................................... 27 0 13 4.15 54 14 4 6 13 9 3 0 0 0 2 3 0 0
...................................TAGATCTGACAATAAATCTGACAGCAAA........................................................................................... 28 0 4 4.00 16 1 0 6 9 0 0 0 0 0 0 0 0 0
................................................................................................................................TACTTATTTTATAAGTTGGTCGCTGA 26 0 2 4.00 8 0 0 4 0 0 4 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGTA................................................. 25 2 15 3.93 59 17 42 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGAACGG.................................................. 24 1 14 3.71 52 1 4 28 19 0 0 0 0 0 0 0 0 0
.......................................TCTGACAATAAATCTGACAGCAAA........................................................................................... 24 0 5 3.60 18 9 5 1 3 0 0 0 0 0 0 0 0 0
..............................................................................TGTTCGAACCTTTTGCTGCAGACCGG.................................................. 26 0 4 3.50 14 6 2 1 3 1 1 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACA.................................................... 22 1 16 3.50 56 22 34 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTGACAATAAATCTGACAGCAAATTGA....................................................................................... 28 0 5 3.40 17 3 1 7 5 1 0 0 0 0 0 0 0 0
.................................................................................TCGAACCTTTTGCTGCAGACCGG.................................................. 23 0 14 3.29 46 9 3 0 0 8 9 12 0 0 2 3 0 0
.................................................................................TCGAACCTTTTGCTGCAGACCG................................................... 22 0 16 3.25 52 3 2 0 0 0 1 3 39 0 4 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGTT................................................. 25 2 15 3.13 47 15 32 0 0 0 0 0 0 0 0 0 0 0
........TAATTGCCTTTTGTCGGAGAAATCCGT....................................................................................................................... 27 0 8 3.13 25 0 0 12 7 0 0 5 0 0 0 0 1 0
.......................................TCTGACAATAAATCTGACAGCAAATTGAA...................................................................................... 29 0 5 3.00 15 6 9 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACTGG.................................................. 24 1 14 2.93 41 2 6 2 3 18 10 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTGCAGACC.................................................... 23 0 5 2.80 14 9 0 3 1 0 1 0 0 0 0 0 0 0
.......................................TCTGACAATAAATCTGACAGCAA............................................................................................ 23 0 5 2.80 14 10 4 0 0 0 0 0 0 0 0 0 0 0
................................CGTTAGATCTGACAATAAATCTGA.................................................................................................. 24 0 5 2.80 14 0 0 10 3 1 0 0 0 0 0 0 0 0
...................TGTCGGAGAAATCCGTTAGATCTG............................................................................................................... 24 0 4 2.75 11 0 0 0 0 0 0 0 0 11 0 0 0 0
.................................................................................TCGAACCTTTTGCTGCAGAC..................................................... 20 0 16 2.69 43 0 2 0 0 0 0 1 40 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGA...................................................... 20 0 16 2.63 42 6 32 0 0 0 1 3 0 0 0 0 0 0
...................................TAGATCTGACAATAAATCT.................................................................................................... 19 0 5 2.60 13 0 0 0 1 0 0 0 0 12 0 0 0 0
.................................................................................................................................ACTTATTTTATAAGTTGGTCGCTGA 25 0 2 2.50 5 0 0 0 0 0 5 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGGT................................................. 25 1 14 2.43 34 19 10 1 1 2 0 1 0 0 0 0 0 0
...................................TAGATCTGACAATAAATCTG................................................................................................... 20 0 5 2.40 12 0 0 0 0 0 0 0 0 12 0 0 0 0
.........................................TGACAATAAATCTGACAGCAAATTGA....................................................................................... 26 0 5 2.40 12 9 1 0 1 1 0 0 0 0 0 0 0 0
................................CGTTAGATCTGACAATAAATCT.................................................................................................... 22 0 5 2.40 12 0 0 0 0 0 0 0 12 0 0 0 0 0
...................................TAGATCTGACAATAAATCTGAC................................................................................................. 22 0 5 2.40 12 0 0 0 0 0 0 0 12 0 0 0 0 0
...................................TAGATCTGACAATAAATC..................................................................................................... 18 0 5 2.40 12 0 0 0 0 0 0 0 12 0 0 0 0 0
...........TTGCCTTTTGTCGGAGAAATCCGTTAGA................................................................................................................... 28 0 9 2.33 21 0 0 13 3 1 4 0 0 0 0 0 0 0
....................................................................................AACCTTTTGCTGCAGACCG................................................... 19 0 18 2.28 41 0 0 0 0 0 0 0 41 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCA................................................... 23 1 16 2.25 36 30 6 0 0 0 0 0 0 0 0 0 0 0
...................................TAGATCTGACAATAAATCTGACAGCA............................................................................................. 26 0 4 2.25 9 0 0 4 4 1 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTCTGCTGCAGAC..................................................... 21 1 16 2.25 36 27 8 1 0 0 0 0 0 0 0 0 0 0
........................................CTGACAATAAATCTGACAGCAAATTGA....................................................................................... 27 0 5 2.00 10 0 0 0 0 1 9 0 0 0 0 0 0 0
............................................................................................................TAAAAGGAATGGAGATTTCGTACTT..................... 25 0 4 2.00 8 0 0 0 6 0 0 2 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTCCAGACCGG.................................................. 25 1 4 2.00 8 7 0 1 0 0 0 0 0 0 0 0 0 0
..............................TCCGTTAGATCTGACAATAAATCTGA.................................................................................................. 26 0 4 2.00 8 0 0 2 0 3 3 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTGCAGACCGGA................................................. 26 1 4 2.00 8 8 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTCTGCTGCAGACCGA.................................................. 24 2 15 1.93 29 17 12 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACATTTTGCTGCAGACCGACAA............................................... 27 2 14 1.79 25 0 25 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTCCAGACCGG.................................................. 24 1 14 1.79 25 21 1 2 1 0 0 0 0 0 0 0 0 0
................TTTTGTCGGAGAAATCCGT....................................................................................................................... 19 0 9 1.78 16 0 0 13 0 0 0 3 0 0 0 0 0 0
..............................................................................TGTTCGAACCTTTTGCTGCAGACCGGCAA............................................... 29 0 4 1.75 7 3 0 2 2 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCT................................................... 23 1 16 1.75 28 7 21 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTGCAGACCGGCAA............................................... 28 0 4 1.75 7 5 0 1 1 0 0 0 0 0 0 0 0 0
.................................................................................TCGAACCTTTTGCTGCAGACCGGC................................................. 24 0 14 1.71 24 1 0 1 0 1 8 5 0 0 3 5 0 0
..........................................................................TGAATGTTCGAACCTTTTGCTGCAGA...................................................... 26 0 3 1.67 5 1 0 1 2 0 1 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGAT................................................. 25 2 15 1.60 24 15 9 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTCTGCTGCAGACCGT.................................................. 24 2 15 1.60 24 17 7 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTCTGCTGCAGACA.................................................... 22 2 16 1.56 25 17 8 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACT.................................................... 22 1 16 1.56 25 3 9 0 0 7 6 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTGCAGACCGA.................................................. 25 1 4 1.50 6 3 3 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTCTGCTGCAGACCGGCAAC.............................................. 28 1 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACTTTTTGCTGCAGACCG................................................... 23 1 16 1.50 24 21 3 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTCCTGCAGACCGGCAA............................................... 27 1 13 1.46 19 15 1 0 0 2 1 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGATCGGC................................................. 25 1 14 1.43 20 0 0 17 3 0 0 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTGCAGAC..................................................... 22 0 5 1.40 7 5 1 0 1 0 0 0 0 0 0 0 0 0
........TAATTGCCTTTTGTCGGAGAAAT........................................................................................................................... 23 0 8 1.38 11 2 0 6 3 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGGAA................................................ 26 1 14 1.36 19 10 9 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTCCTGCAGACCG................................................... 23 1 16 1.31 21 10 10 0 0 1 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGAACG................................................... 23 1 16 1.25 20 1 12 4 3 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGAA..................................................... 21 1 16 1.25 20 5 15 0 0 0 0 0 0 0 0 0 0 0
................TTTTGTCGGAGAAATCCGTTAGA................................................................................................................... 23 0 9 1.22 11 0 0 1 1 7 1 1 0 0 0 0 0 0
................................................................................TTCGAACCTTTTCCTGCAGACCGG.................................................. 24 1 14 1.14 16 12 1 0 0 2 1 0 0 0 0 0 0 0
................................................................................TTCGAAACTTTTGCTGAAGACCGGC................................................. 25 2 14 1.14 16 0 0 8 7 1 0 0 0 0 0 0 0 0
........TAATTGCCTTTTGTCGGAGAAATCCGTT...................................................................................................................... 28 0 8 1.13 9 0 0 8 1 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTCCTGCAGACCGGC................................................. 25 1 14 1.07 15 10 0 0 0 2 3 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCTG.................................................. 24 1 14 1.07 15 3 12 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTCCAGACCGGC................................................. 25 1 14 1.07 15 6 2 6 1 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGGTA................................................ 26 1 14 1.07 15 1 5 7 1 1 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGTTT................................................ 26 3 15 1.07 16 2 14 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTGACAATAAATCTGACAGCAAATTA........................................................................................ 27 1 5 1.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0
..................................TTAGATCTGACAATAAATCTGACAGC.............................................................................................. 26 0 4 1.00 4 0 0 3 1 0 0 0 0 0 0 0 0 0
.............................ATCCGTTAGATCTGACAATAAATCTGA.................................................................................................. 27 0 4 1.00 4 0 0 1 0 1 2 0 0 0 0 0 0 0
.....................TCGGAGAAATCCGTTAGATCTGACAAT.......................................................................................................... 27 0 4 1.00 4 0 0 0 0 4 0 0 0 0 0 0 0 0
.......................................TCTGACAATAAATCTGACAGCA............................................................................................. 22 0 5 1.00 5 3 2 0 0 0 0 0 0 0 0 0 0 0
...................................................TCTGACAGCAAATTGAACAAAATTGAA............................................................................ 27 0 2 1.00 2 0 0 0 1 1 0 0 0 0 0 0 0 0
..........................................................................TGAATGTTCGAACCTTTTGCTGCAGAA..................................................... 27 1 3 1.00 3 2 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGAA................................................. 25 2 15 0.93 14 7 7 0 0 0 0 0 0 0 0 0 0 0
.............GCCTTTTGTCGGAGAAATCCGTTAGA................................................................................................................... 26 0 9 0.89 8 0 0 1 0 4 3 0 0 0 0 0 0 0
................................................................................TTCGAACATTTTGCTGCAGACCGA.................................................. 24 2 15 0.87 13 0 13 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTCCAGACCG................................................... 23 1 16 0.81 13 13 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACATTTTGCTGCAGACCG................................................... 23 1 16 0.81 13 4 9 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TGTTCGAACCTTTTGCTGCAGACCG................................................... 25 0 5 0.80 4 4 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTGACAATAAATCTGACAGCAAATA......................................................................................... 26 1 5 0.80 4 3 1 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTGACAATAAATCTGACAGCAAAA.......................................................................................... 25 1 5 0.80 4 3 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................TGCGAACCTTTTGCTGCAGACCGGC................................................. 25 1 14 0.79 11 0 0 10 0 0 1 0 0 0 0 0 0 0
............TGCCTTTTGTCGGAGAAATCCGT....................................................................................................................... 23 0 9 0.78 7 1 0 0 0 0 0 6 0 0 0 0 0 0
...............CTTTTGTCGGAGAAATCCGT....................................................................................................................... 20 0 9 0.78 7 0 0 7 0 0 0 0 0 0 0 0 0 0
...................................TAGATCTGACAATAAATCTGACAGCAA............................................................................................ 27 0 4 0.75 3 2 0 1 0 0 0 0 0 0 0 0 0 0
......TTTAATTGCCTTTTGTCGGAGAAA............................................................................................................................ 24 0 8 0.75 6 0 0 2 2 0 1 1 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTGCAGACCGGCA................................................ 27 0 4 0.75 3 2 0 1 0 0 0 0 0 0 0 0 0 0
.......TTAATTGCCTTTTGTCGGAGAAATC.......................................................................................................................... 25 0 8 0.75 6 0 0 1 1 4 0 0 0 0 0 0 0 0
......TTTAATTGCCTTTTGTCGGAGAAATC.......................................................................................................................... 26 0 8 0.75 6 0 0 1 2 0 2 1 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACTGA.................................................. 24 2 15 0.73 11 0 11 0 0 0 0 0 0 0 0 0 0 0
..................................................................................CGAACCTTTTGCTGCAGACCGGC................................................. 23 0 14 0.71 10 2 1 2 0 1 3 1 0 0 0 0 0 0
...............CTTTTGTCGGAGAAATCCGTT...................................................................................................................... 21 0 9 0.67 6 0 0 3 1 2 0 0 0 0 0 0 0 0
................TTTTGTCGGAGAAATCCGTT...................................................................................................................... 20 0 9 0.67 6 0 0 6 0 0 0 0 0 0 0 0 0 0
................TTTTGTCGGAGAAATCCG........................................................................................................................ 18 0 9 0.67 6 0 0 4 0 0 0 2 0 0 0 0 0 0
..........................................................................TGAATGTTCTAACCTTTTGCTGCAGAA..................................................... 27 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................CGAACCTTTTGCTGCAGACCGG.................................................. 22 0 14 0.64 9 2 6 0 0 0 0 1 0 0 0 0 0 0
................................................................................TTCGAACCTTCTGCTGCAGACCGGCAAA.............................................. 28 2 14 0.64 9 5 0 4 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGGAT................................................ 26 2 14 0.64 9 5 4 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTGCAGACA.................................................... 23 1 5 0.60 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.........................................TGACAATAAATCTGACAGCAAATA......................................................................................... 24 1 5 0.60 3 0 3 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTGCAGACCA................................................... 24 1 5 0.60 3 3 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACTGGCA................................................ 26 1 14 0.57 8 0 1 0 1 1 5 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACAA................................................... 23 2 16 0.56 9 4 5 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACAG................................................... 23 1 16 0.56 9 4 5 0 0 0 0 0 0 0 0 0 0 0
..................................................................................CGAACCTTTTGCTGCAGACCG................................................... 21 0 16 0.56 9 3 6 0 0 0 0 0 0 0 0 0 0 0
............TGCCTTTTGTCGGAGAAATCCGTTAGAA.................................................................................................................. 28 1 9 0.56 5 0 0 1 2 1 1 0 0 0 0 0 0 0
............TGCCTTTTGTCGGAGAAATCC......................................................................................................................... 21 0 9 0.56 5 5 0 0 0 0 0 0 0 0 0 0 0 0
............TGCCTTTTGTCGGAGAAATCCGTT...................................................................................................................... 24 0 9 0.56 5 2 1 0 0 0 0 1 0 0 1 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGGTAA............................................... 27 1 13 0.54 7 1 0 1 5 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACATTTTGCTGCAGACCGACA................................................ 26 2 15 0.53 8 0 8 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGATT................................................ 26 3 15 0.53 8 3 5 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCTT.................................................. 24 2 15 0.53 8 1 7 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TGTTCGAACCTTTTGCTGCAGACCGT.................................................. 26 1 4 0.50 2 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................CCGGCAACTAAAAGGAATGGAGATTTC........................... 27 0 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGGCACC.............................................. 28 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................TCCGTTAGATCTGACAATAAATCTG................................................................................................... 25 0 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0 0 0
...............................................................................................................AAGGAATGGAGATTTCGTACTTATT.................. 25 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................ATGGAGATTTCGTACTTATT.................. 20 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................TAGATCTGACAATAAATCTGACAGCAAAAT......................................................................................... 30 1 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0 0 0
.................TTTGTCGGAGAAATCCGTTAGATCTGA.............................................................................................................. 27 0 4 0.50 2 0 0 0 1 0 1 0 0 0 0 0 0 0
..............................................................................................TGCAGACCGGCAACTAAAAGGAATGGAG................................ 28 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTCTGCTGCAGA...................................................... 20 1 16 0.50 8 3 4 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTGCTGCAGACCGGCAACTAAAAGGAA..................................... 27 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTGCAGACCGTT................................................. 26 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................ACAATAAATCTGACAGCAAATTGAACAAA.................................................................................. 29 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TATTTTATAAGTTGGTCGCTGA 22 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................GAAATCCGTTAGATCTGACAGCAAA....................................................................................................... 25 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TGAACAAAATTGAATGTTCG...................................................................... 20 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................TAAAAGGAATGGAGATTTCGTAC....................... 23 0 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCCTTTGCTGCAGACCG................................................... 23 1 16 0.50 8 4 4 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TAAAAGGAATGGAGATTTCGT......................... 21 0 4 0.50 2 0 0 0 0 0 0 2 0 0 0 0 0 0
..................................................ATCTGACAGCAAATTGAACAAAATTGA............................................................................. 27 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................TAAATCTGACAGCAAATTGAGCAAAT................................................................................. 26 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................AACTAAAAGGAATGGAGATTTCGTAC....................... 26 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................TGACAGCAAATTGAACAAAATTGAATA.......................................................................... 27 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................TAAAAGGAATGGAGATTTCGTACTTATT.................. 28 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................TAAATCTGACAGCAAATTGAACAAAA................................................................................. 26 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................TCTGACAGCAAATTGAACAAAAA................................................................................ 23 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACTGACAA............................................... 27 2 14 0.50 7 0 7 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGAACGGCA................................................ 26 1 14 0.50 7 0 0 5 2 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTCTGCTGCAGACCGGCAT............................................... 27 2 14 0.50 7 7 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TGACAGCAAATTGAACAAAATTGAATGT......................................................................... 28 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGGCAAC.............................................. 28 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGAAA.................................................... 22 2 16 0.50 8 2 6 0 0 0 0 0 0 0 0 0 0 0
...................................................TCTGACAGCAAATTGAACAAAATTGAAT........................................................................... 28 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTGCAGACCGGAA................................................ 27 1 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TGCAGACCGGCAACTAAAAGGAATGGAGAT.............................. 30 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................TGTTCGAACCTTTTGCTGCAGACCGGCA................................................ 28 0 4 0.50 2 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................ACTAAAAGGAATGGAGATTTCGTACT...................... 26 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................TTCGAACCTTCTGCTGCAGACCGAA................................................. 25 3 15 0.47 7 5 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGGATA............................................... 27 2 13 0.46 6 2 4 0 0 0 0 0 0 0 0 0 0 0
...........TTGCCTTTTGTCGGAGAAATCCGT....................................................................................................................... 24 0 9 0.44 4 0 0 0 0 0 0 4 0 0 0 0 0 0
............TGCCTTTTGTCGGAGAAATC.......................................................................................................................... 20 0 9 0.44 4 2 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACTT................................................... 23 2 16 0.44 7 1 6 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTCTGCTGCAGACCA................................................... 23 2 16 0.44 7 7 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGATCGG.................................................. 24 1 14 0.43 6 1 1 0 2 2 0 0 0 0 0 0 0 0
............................................................................................................TAAAAGGAATGGAGATT............................. 17 0 5 0.40 2 0 0 0 0 0 0 2 0 0 0 0 0 0
.........................................TGACAATAAATCTGACAGCAAATTGAAC..................................................................................... 28 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TGTTCGAACCTTTTGCTGCAGACC.................................................... 24 0 5 0.40 2 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................TGACAATAAATCTGACAGCAAATTGAG...................................................................................... 27 1 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.........................................TGACAATAAATCTGACAGCAAATTG........................................................................................ 25 0 5 0.40 2 0 0 0 1 1 0 0 0 0 0 0 0 0
.......................................TCTGACAATAAATCTGACAGCAAATTG........................................................................................ 27 0 5 0.40 2 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................TGACAATAAATCTGACAGCAAATTGAAA..................................................................................... 28 1 5 0.40 2 1 1 0 0 0 0 0 0 0 0 0 0 0
................................CGTTAGATCTGACAATAAATCTGAC................................................................................................. 25 0 5 0.40 2 0 0 0 2 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGGAAA............................................... 27 1 13 0.38 5 3 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGAAGACCG................................................... 23 1 16 0.38 6 4 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TCGAACCTTTTGCTGCAGACCGGCA................................................ 25 0 14 0.36 5 0 0 0 0 1 2 1 0 0 1 0 0 0
................................................................................TTCGAACCCTTTGCTGCAGACCGG.................................................. 24 1 14 0.36 5 5 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGGCAT............................................... 27 1 14 0.36 5 4 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CTTGCTGCATACCGGCAT............................................... 18 3 20 0.35 7 0 0 0 0 0 0 0 7 0 0 0 0 0
..........................................................................TGAATGTTCTAACCTTTTGCTGCAGA...................................................... 26 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................TGAATGTTCGAACCTTTTGCTGCAGACA.................................................... 28 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................TTGAATGTTCGAACCTTTTGCTGCAGAC..................................................... 28 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................AAATTGAATGTTCTAACCTTTTGCTGC......................................................... 27 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................TTCGAACATTTTGCTGCAGACCGAC................................................. 25 2 15 0.33 5 0 5 0 0 0 0 0 0 0 0 0 0 0
..........................................................................TGAATGTTCGAACCTTTTGCTGCAGAC..................................................... 27 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................TGCAGACCGGCAACTAAAAGGAAA.................................... 24 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................ATTGAATGTTCGAACCTTTTGCTGC......................................................... 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............TGCCTTTTGTCGGAGAAATCCGTTAG.................................................................................................................... 26 0 9 0.33 3 1 0 0 0 1 1 0 0 0 0 0 0 0
..TATCTTTAATTGCCTTTTGTCGGAGA.............................................................................................................................. 26 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................CTGAATGTTCGAACCTTTTGCTGCAGA...................................................... 27 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............CTTTTGTCGGAGAAATCC......................................................................................................................... 18 0 9 0.33 3 0 0 3 0 0 0 0 0 0 0 0 0 0
..........................................................................TGAATGTTCGAACCTTTTGCTGC......................................................... 23 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................TGAATGTTCGAACCTTTTGCTGCAGACC.................................................... 28 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................................TGAATGTTCTAACCTTTTGCTGCAGAC..................................................... 27 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..TATCTTTAATTGCCTTTTGTCGGAGAAA............................................................................................................................ 28 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................TGAATGTTCGAACCTTTTGCTGCA........................................................ 24 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................TTTTGTCGGAGAAATCCGTTAGAT.................................................................................................................. 24 0 9 0.33 3 0 0 0 0 1 0 2 0 0 0 0 0 0
.........................................................................TTGAATGTTCGAACCTTTTGCTGCA........................................................ 25 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............CTTTTGTCGGAGAAATCCG........................................................................................................................ 19 0 9 0.33 3 0 0 3 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGTC................................................. 25 1 15 0.33 5 3 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGAAT................................................ 26 3 15 0.33 5 4 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................TTGAATGTTCGAACCTTTTGCTGCAGA...................................................... 27 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGAT..................................................... 21 1 16 0.31 5 1 4 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGAAC.................................................... 22 1 16 0.31 5 0 1 3 0 1 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACTGGCAA............................................... 27 1 13 0.31 4 0 0 1 1 1 1 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCA........................................................ 18 0 17 0.29 5 0 0 0 0 0 0 5 0 0 0 0 0 0
................................................................................TTCGAACCTTTTCCTGCAGACCGGCA................................................ 26 1 14 0.29 4 3 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................TGCGAACCTTTTGCTGCAGACCGG.................................................. 24 1 14 0.29 4 1 0 1 2 0 0 0 0 0 0 0 0 0
................................................................................TTCGAAACTTTTGCTGAAGACCGGCA................................................ 26 2 14 0.29 4 0 0 2 1 1 0 0 0 0 0 0 0 0
................................................................................TTCGAACTTTTTGCTGCAGACCGG.................................................. 24 1 14 0.29 4 3 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................TCGAACCTTCTGCTGCAGACCGG.................................................. 23 1 14 0.29 4 3 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTCCAGACCGGCA................................................ 26 1 14 0.29 4 0 0 2 2 0 0 0 0 0 0 0 0 0
................................................................................TACGAACCTTTTGCTGCAGACCGG.................................................. 24 1 14 0.29 4 1 2 0 0 1 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGATA................................................ 26 2 15 0.27 4 2 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACTGAC................................................. 25 2 15 0.27 4 0 4 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACTGTA................................................. 25 3 15 0.27 4 0 4 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGTAA................................................ 26 2 15 0.27 4 2 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTCTGCTGCAGACCGAAA................................................ 26 3 15 0.27 4 4 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTCTGCTGCAGACCGAT................................................. 25 3 15 0.27 4 1 3 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGAC................................................. 25 1 15 0.27 4 2 1 0 0 0 0 0 0 0 0 1 0 0
................................................................................TTCGAACCTTTTGCTGCAGACCGTTA................................................ 26 2 15 0.27 4 1 3 0 0 0 0 0 0 0 0 0 0 0
..............................TCCGTTAGATCTGCGAATAAATCTGA.................................................................................................. 26 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................TATATCTGACAATAAATCTGACAGCAAAT.......................................................................................... 29 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................TCCGTTAGATCTGACAATAAATCTGAA................................................................................................. 27 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................TAGATCTGACAATAAATCTGACAG............................................................................................... 24 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................TGTTCTAACCTTTTGCTGCAGACCGG.................................................. 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TAAAAGGAATGGAGATTTCGTACTTAT................... 27 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................AAAGGAATGGAGATTTCGTACTTA.................... 24 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................TAGATCTGACAATAAACCTGACAGCAAAT.......................................................................................... 29 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................TGTTCGAACCTTTTGCTGCAGACCGGT................................................. 27 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTCCAGACCGGCAA............................................... 28 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTGCAGACCGGT................................................. 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........TAATTGCCTTTTGTCTGAGAAATC.......................................................................................................................... 24 1 8 0.25 2 0 0 1 1 0 0 0 0 0 0 0 0 0
............................AATCCGTTAGATCTGACAATAAA....................................................................................................... 23 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................CGGAGAAATCCGTTAGATCTGACAA........................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................TAGATCTGACAATGAATCTGACAGCAAAT.......................................................................................... 29 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................TCCGTTAGATCTGACAATAAATC..................................................................................................... 23 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..................TTGTCGGAGAAATCCGTTAGATCTGA.............................................................................................................. 26 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......................CGGAGAAATCCGTTAGATCTGACAATAA........................................................................................................ 28 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCCGCAGACCGG.................................................. 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................CGGAGAAATCCGTTAGATCTGACAAT.......................................................................................................... 26 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........AATTGCCTTTTGTCGGAGAAATC.......................................................................................................................... 23 0 8 0.25 2 0 0 0 1 0 1 0 0 0 0 0 0 0
............................................................................................................TAAAAGGAATGGAGATTTCGTT........................ 22 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................AGGAATGGAGATTTCGTACTT..................... 21 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................TCGGAGAAATCCGTTAGATCTGACAA........................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................AAAGGAATGGAGATTTCGTACTTAT................... 25 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................TTTGTCGGAGAAATCCGTTAGATCTGAC............................................................................................................. 28 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................TTAGATCTGACAATAAATCTGACAGCAAAT.......................................................................................... 30 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................GTTCGAACCCTTTGCTGCAGACCGG.................................................. 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................TAGATCTGACAATAAATCTGACAGT.............................................................................................. 25 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTAGCTGCAGACCGG.................................................. 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GTTCGAATCTTTTGCTGCGGACCGG.................................................. 25 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................GAGAAATCCGTTAGATCTGACAATAAA....................................................................................................... 27 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 1
..............................TCCGTTAGATCTGACAATAAAA...................................................................................................... 22 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTGCAGACAGG.................................................. 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TAAAAGGAATGGAGATTTCGTTA....................... 23 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................TCTGACAGCAAATTGAACAAAATTGGA............................................................................ 27 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................TTTTGCTGCAGACCGGCTGCT............................................. 21 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.................TTTGTCGGAGAAATCCGTTAGATCTG............................................................................................................... 26 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................GTTCGAACCTCTTGCTGCAGACCGG.................................................. 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTGCAGACCGGAT................................................ 27 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TAAAAGGAATGGAGATTTCGTAT....................... 23 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................GTTCGAACTTTTTGCTGCAGACCGG.................................................. 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TGTTCGAACCTTTTGCTCCAGACCGGC................................................. 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................TGTCGGAGAAATCCGTTAGATCTGAC............................................................................................................. 26 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................TTCGAACCTTTTGCTGCAGACG.................................................... 22 1 16 0.25 4 1 3 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GTTGGAACCTTTTGCTGCAGAGCGT.................................................. 25 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................TTTGTCGGAGAAATCCGTTAGATC................................................................................................................. 24 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................CGTTCGAACCTTTTGCTGCAGACCGG.................................................. 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GTTCGAACCTTTTGCTGCAGACCGTA................................................. 26 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TAATGGAAATTAACGGAAAACAGCCTCTTTAGGCAATCTAGACTGTTATTTAGACTGTCGTTTAACTTGTTTTAACTTACAAGCTTGGAAAACGACGTCTGGCCGTTGATTTTCCTTACCTCTAAAGCATGAATAAAATATTCAACCAGCGACT
***********************************................((((.((((((((((((((........)))))))....)))))))))))...................*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 O002
Head
 M053
female body
 O001
Testis
 M025
embryo
 SRR902009
testis
 M024
male body		 M023
head
..............................AGGCAATCTAGACTGTTATTTAGACTGT................................................................................................ 28 0 4 44.25 177 71 31 57 16 2 0 0 0 0 0 0 0 0
........................CTCTTTAGGCAATCTAGACTGTTATT........................................................................................................ 26 0 4 10.75 43 20 11 0 1 3 0 0 3 0 4 0 1 0
................AAAACAGCCTCTTTAGGCAATCTAGACTG............................................................................................................. 29 0 4 5.50 22 0 0 0 0 0 0 22 0 0 0 0 0 0
.............................TAGGCAATCTAGACTGTTATTTAGACTGT................................................................................................ 29 0 4 4.25 17 4 6 5 1 0 0 0 0 0 0 1 0 0
..........TAACGGAAAACAGCCTCTTTAGGCAAT..................................................................................................................... 27 0 8 3.88 31 0 0 0 0 30 0 0 1 0 0 0 0 0
.............CGGAAAACAGCCTCTTTAGGCAATCT................................................................................................................... 26 0 9 3.56 32 19 9 2 0 1 0 0 1 0 0 0 0 0
................................................................................................................TCCTTACCTCTAAAGCATGAAT.................... 22 0 4 3.50 14 0 0 0 0 0 0 0 0 14 0 0 0 0
.......................CCTCTTTAGGCAATCTAGACTGTTATT........................................................................................................ 27 0 4 3.50 14 7 2 0 0 1 0 0 3 0 1 0 0 0
...............................................................................CAAGCTTGGAAAACGACGTCTGGCCGT................................................ 27 0 4 3.50 14 2 4 2 6 0 0 0 0 0 0 0 0 0
....................CAGCCTCTTTAGGCAATCTAGACTG............................................................................................................. 25 0 4 3.25 13 1 10 0 2 0 0 0 0 0 0 0 0 0
..................AACAGCCTCTTTAGGCAATC.................................................................................................................... 20 0 9 2.78 25 0 0 0 0 0 0 25 0 0 0 0 0 0
.......................CCTCTTTAGGCAATCTAGACTG............................................................................................................. 22 0 4 2.75 11 0 0 0 0 0 0 11 0 0 0 0 0 0
.................................................................................AGCTTGGAAAACGACGTCTGGCCGT................................................ 25 0 14 2.64 37 2 3 4 4 5 18 0 1 0 0 0 0 0
....................CAGCCTCTTTAGGCAATCTAGACTGT............................................................................................................ 26 0 4 2.25 9 0 4 4 1 0 0 0 0 0 0 0 0 0
...........................TTTAGGCAATCTAGACTGTTATT........................................................................................................ 23 0 4 2.25 9 4 3 0 1 0 1 0 0 0 0 0 0 0
................AAAACAGCCTCTTTAGGCAATCTAGACT.............................................................................................................. 28 0 4 2.25 9 4 3 1 1 0 0 0 0 0 0 0 0 0
..........................................CTGTTATTTAGACTGTCGTTTAAC........................................................................................ 24 0 5 2.00 10 4 1 0 2 0 0 0 0 0 3 0 0 0
.................AAACAGCCTCTTTAGGCAATCTAGACT.............................................................................................................. 27 0 4 1.75 7 2 3 2 0 0 0 0 0 0 0 0 0 0
...................................ATCTAGACTGTTATTTAGACTGTCGT............................................................................................. 26 0 4 1.75 7 0 1 0 5 1 0 0 0 0 0 0 0 0
...........................TTTAGGCAATCTAGACTGTTATTT....................................................................................................... 24 0 4 1.75 7 2 0 2 2 0 0 0 1 0 0 0 0 0
................................................................................AAGCTTGGAAAACGACGTCTGGCCGT................................................ 26 0 14 1.64 23 1 5 1 1 0 15 0 0 0 0 0 0 0
.......................................AGACTGTTATTTAGACTGTCGTTTAAC........................................................................................ 27 0 5 1.60 8 2 5 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACGACGTCTGGCCGTTGATTTT......................................... 23 0 2 1.50 3 0 0 0 0 3 0 0 0 0 0 0 0 0
.............................TAGGCAATCTAGACTGTTATTTAGA.................................................................................................... 25 0 4 1.50 6 2 0 2 0 0 1 0 0 0 0 1 0 0
..............................AGGCAATCTAGACTGTTATTTAGA.................................................................................................... 24 0 4 1.50 6 2 3 1 0 0 0 0 0 0 0 0 0 0
.............................TAGGCAATCTAGACTGTTATTTAGACT.................................................................................................. 27 0 4 1.50 6 1 4 0 1 0 0 0 0 0 0 0 0 0
....GGAAATTAACGGAAAACAGCCTCTTT............................................................................................................................ 26 0 7 1.29 9 1 7 0 0 0 0 0 1 0 0 0 0 0
........................CTCTTTAGGCAATCTAGACTGTTATTT....................................................................................................... 27 0 4 1.25 5 2 1 2 0 0 0 0 0 0 0 0 0 0
...............................................................................CAAGCTTGGAAAACGACGTCTGGCCGTT............................................... 28 0 4 1.25 5 4 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................AGCTTGGAAAACGACGTCTGGCCGTT............................................... 26 0 13 1.23 16 2 7 2 1 1 1 0 0 0 0 2 0 0
.....................................................................................................................ACCTCTAAAGCATGAATAAAAT............... 22 0 2 1.00 2 0 0 0 0 0 0 0 0 2 0 0 0 0
....................CAGCCTCTTTAGGCAATCTAGACTGTTAT......................................................................................................... 29 0 4 1.00 4 0 0 3 1 0 0 0 0 0 0 0 0 0
..........TAACGGAAAACAGCCTCTTTAGGCAA...................................................................................................................... 26 0 8 1.00 8 0 0 0 0 8 0 0 0 0 0 0 0 0
..................................AATCTAGACTGTTATTTAGACTGTCGT............................................................................................. 27 0 4 1.00 4 0 2 1 1 0 0 0 0 0 0 0 0 0
...................................................................TGTTTTAACTTACAAGCTTGGAAA............................................................... 24 0 2 1.00 2 0 0 0 0 1 0 0 1 0 0 0 0 0
.......................................AGACTGTTATTTAGACTGTCGTTTAACT....................................................................................... 28 0 5 1.00 5 2 1 0 2 0 0 0 0 0 0 0 0 0
...............................GGCAATCTAGACTGTTATT........................................................................................................ 19 0 4 1.00 4 0 0 0 0 4 0 0 0 0 0 0 0 0
...................ACAGCCTCTTTAGGCAATCTAGACTGTT........................................................................................................... 28 0 4 1.00 4 2 0 0 1 1 0 0 0 0 0 0 0 0
....................CAGCCTCTTTAGGCAATCTAGACTGTT........................................................................................................... 27 0 4 1.00 4 2 2 0 0 0 0 0 0 0 0 0 0 0
..................AACAGCCTCTTTAGGCAATCTAGACT.............................................................................................................. 26 0 4 1.00 4 2 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................TTGTTTTAACTTACAAGCTTGGAA................................................................ 24 0 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
...............................................................................CAAGCTTGGAAAACGACGTCTGGCCAT................................................ 27 1 4 1.00 4 0 0 1 3 0 0 0 0 0 0 0 0 0
............................TTAGGCAATCTAGACTGTTATTT....................................................................................................... 23 0 4 1.00 4 1 0 3 0 0 0 0 0 0 0 0 0 0
.........................................................................AACTTACAAGATTGGAAAACGACGT........................................................ 25 1 3 1.00 3 0 0 0 0 0 3 0 0 0 0 0 0 0
.................................................................................................................CCTTACCTCTAAAGCATGAATAAAAT............... 26 0 2 1.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0
..........................................CTGTTATTTAGACTGTCGTTTAACTT...................................................................................... 26 0 5 0.80 4 0 1 1 1 0 0 0 0 0 1 0 0 0
..........................................CTGTTATTTAGACTGTCGTTTAACT....................................................................................... 25 0 5 0.80 4 0 0 0 2 1 0 0 1 0 0 0 0 0
.........................TCTTTAGGCAATCTAGACTGTTAT......................................................................................................... 24 0 4 0.75 3 1 0 2 0 0 0 0 0 0 0 0 0 0
...................ACAGCCTCTTTAGGCAATCTAGACTGT............................................................................................................ 27 0 4 0.75 3 0 2 0 1 0 0 0 0 0 0 0 0 0
..............................................................................ACAAGCTTGGAAAACGACGTCTGGCCGT................................................ 28 0 4 0.75 3 1 2 0 0 0 0 0 0 0 0 0 0 0
.....................AGCCTCTTTAGGCAATCTAGACTG............................................................................................................. 24 0 4 0.75 3 0 0 0 3 0 0 0 0 0 0 0 0 0
......................GCCTCTTTAGGCAATCTAGACTG............................................................................................................. 23 0 4 0.75 3 0 2 1 0 0 0 0 0 0 0 0 0 0
........................CTCTTTAGGCAATCTAGACTGTTAT......................................................................................................... 25 0 4 0.75 3 0 0 0 2 0 0 0 1 0 0 0 0 0
.....................................CTAGACTGTTATTTAGACTGTCGTTT........................................................................................... 26 0 4 0.75 3 0 3 0 0 0 0 0 0 0 0 0 0 0
...............................GGCAATCTAGACTGTTATTTAGACTGT................................................................................................ 27 0 4 0.75 3 0 1 0 2 0 0 0 0 0 0 0 0 0
..........................CTTTAGGCAATCTAGACTGTTATTT....................................................................................................... 25 0 4 0.75 3 0 1 0 0 0 2 0 0 0 0 0 0 0
..............................................................................ACAAGCTTGGAAAACGACGTCTGGCCAT................................................ 28 1 4 0.75 3 0 0 1 2 0 0 0 0 0 0 0 0 0
........................................................................TAACTTACAAGCTTGGAAAACGACGT........................................................ 26 0 3 0.67 2 0 1 0 0 0 0 0 1 0 0 0 0 0
.......................................................................TTAACTTACAAGCTTGGAAAACGACGT........................................................ 27 0 3 0.67 2 0 1 0 0 0 1 0 0 0 0 0 0 0
.......................................AGACTGTTATTTAGACTGTCGTTT........................................................................................... 24 0 5 0.60 3 0 1 0 2 0 0 0 0 0 0 0 0 0
................................................................................AAGCTTGGAAAACGACGTCTGGCCGTT............................................... 27 0 13 0.54 7 1 0 0 1 0 5 0 0 0 0 0 0 0
...............................................................................................CGTCTGGCCGTTGATTTTCCTT..................................... 22 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................CAAGATTGGAAAACGACGTCTGGCCGT................................................ 27 1 4 0.50 2 0 0 0 0 0 2 0 0 0 0 0 0 0
.......................CCTCTTTAGGCAATCTAGACTGTCGT......................................................................................................... 26 2 4 0.50 2 0 0 0 0 0 2 0 0 0 0 0 0 0
...................................................................TGTTTTAACTTACAAGATTGGAAA............................................................... 24 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................TCTAGACTGTTATTTAGACTGTCGT............................................................................................. 25 0 4 0.50 2 0 0 0 1 0 1 0 0 0 0 0 0 0
..........................CTTTAGGCAATCTAGACTGTTATT........................................................................................................ 24 0 4 0.50 2 0 0 0 0 0 0 0 0 0 2 0 0 0
.........................TCTTTAGGCAATCTAGACTGTTATT........................................................................................................ 25 0 4 0.50 2 0 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................CGACGTCTGGCCGTTGATTTTCCTT..................................... 25 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................TTAGGCAATCTAGACTGTCGTTT....................................................................................................... 23 2 4 0.50 2 0 0 0 0 0 2 0 0 0 0 0 0 0
............................................................................................CGACGTCTGGCCGTTGATTTTCCTTA.................................... 26 0 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................GATTTTCCTTACCTCTAAAGTATGAA..................... 26 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................AGGCAATCTAGACTGTTATTTAGAC................................................................................................... 25 0 4 0.50 2 0 0 1 0 1 0 0 0 0 0 0 0 0
...................ACAGCCTCTTTAGGCAATCTAGACTG............................................................................................................. 26 0 4 0.50 2 0 1 1 0 0 0 0 0 0 0 0 0 0
...................ACAGCCTCTTTAGGCAATCTAGACTGTTAT......................................................................................................... 30 0 4 0.50 2 0 0 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................ACGACGTCTGGCCGTTGATTTT......................................... 22 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................CTTACCTCTAAAGCATGAATA................... 21 0 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0 0 0
.....................................CTAGAGTGTTATTTAGACTGTCGTTT........................................................................................... 26 1 4 0.50 2 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................CCTCTTTAGGCAATCTAGACTGTTATTT....................................................................................................... 28 0 4 0.50 2 1 0 0 1 0 0 0 0 0 0 0 0 0
..................AACAGCCTCTTTAGGCAATCTAGACTGTTATT........................................................................................................ 32 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0
....................................TCTAGACTGTTATTTAGACTGTCGTTT........................................................................................... 27 0 4 0.50 2 0 1 0 1 0 0 0 0 0 0 0 0 0
.................................................TTAGACTGTCGTTTAACTTGTTTTAACTT............................................................................ 29 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................CTTTAGGCAATCTAGACTGTTATTTAGA.................................................................................................... 28 0 4 0.50 2 0 0 0 0 0 2 0 0 0 0 0 0 0
...........................TTTAGGCAATCTAGACTGTTAT......................................................................................................... 22 0 4 0.50 2 0 1 1 0 0 0 0 0 0 0 0 0 0
......................GCCTCTTTAGGCAATCTAGACT.............................................................................................................. 22 0 4 0.50 2 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................TTAAGACGACGTCTGGCCGTTGATT........................................... 25 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................TAGGCAATCTAGACTGTTATTT....................................................................................................... 22 0 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0 0
......................................................................................GGAAAACGACGTCTGGCCGTTGATTTT......................................... 27 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................AGGCAATCTAGACTGTTAT......................................................................................................... 19 0 4 0.50 2 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................AGCTTGGAAAACGACGTCTGACCGTTGAT............................................ 29 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AAACGACGTCTGGCCGTTGAT............................................ 21 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................TAGACTGTCGTTTAACTTGTTT.................................................................................. 22 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................................CCTTACCTCTAAAGCATGAATAAAATAT............. 28 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CGTTGATTTTCCTTACCTCTAAAGCAT........................ 27 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................AAGGCAATCTAGACTGTTATTTAGACTGT................................................................................................ 29 1 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0 0
..............................AGGCAATCTAGACTGTTATTTAGACTGTCGT............................................................................................. 31 0 4 0.50 2 1 0 1 0 0 0 0 0 0 0 0 0 0
.............CGGAAAACAGCCTCTTTAGGCAATCTA.................................................................................................................. 27 0 9 0.44 4 0 0 2 0 1 0 0 1 0 0 0 0 0
.............CGGAAAACAGCCTCTTTAGGCAAT..................................................................................................................... 24 0 9 0.44 4 3 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................AACGACGTCTGGCCGT................................................ 16 0 18 0.44 8 1 0 0 0 7 0 0 0 0 0 0 0 0
..............GGAAAACAGCCTCTTTAGGCAATCT................................................................................................................... 25 0 9 0.44 4 1 0 0 0 0 0 0 2 0 1 0 0 0
....GGAAATTAACGGAAAACAGCCTCTT............................................................................................................................. 25 0 7 0.43 3 0 2 0 1 0 0 0 0 0 0 0 0 0
...............................................................................CAAGCTTGGAAAACGACGTCTGGC................................................... 24 0 5 0.40 2 0 0 0 1 0 1 0 0 0 0 0 0 0
..........................................CTGTTATTTAGACTGTCGTT............................................................................................ 20 0 5 0.40 2 0 0 0 1 1 0 0 0 0 0 0 0 0
...................................................AGACTGTCGTTTAACTT...................................................................................... 17 0 5 0.40 2 0 1 0 0 1 0 0 0 0 0 0 0 0
.......................................AGACTGTTATTTAGACTGTCGTTTAACTT...................................................................................... 29 0 5 0.40 2 1 0 1 0 0 0 0 0 0 0 0 0 0
..........TAACGGAAAACAGCCTCTTTAGGCA....................................................................................................................... 25 0 8 0.38 3 0 0 0 0 3 0 0 0 0 0 0 0 0
....................................................................................TTGGAAAACGACGTCTGGCCGT................................................ 22 0 16 0.38 6 0 0 0 3 0 2 0 0 0 0 1 0 0
........................CTCTTTAGGCAATCTA.................................................................................................................. 16 0 11 0.36 4 0 0 0 0 4 0 0 0 0 0 0 0 0
...................................................................................CTTGGAAAACGACGTCTGGCCGT................................................ 23 0 14 0.36 5 0 0 0 0 0 4 0 0 0 0 1 0 0
...........................................................................................ACGACGTCTGGCCGTT............................................... 16 0 17 0.35 6 1 0 0 0 5 0 0 0 0 0 0 0 0
............................................................................TTACAAGATTGGAAAACGACGTCTGGC................................................... 27 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............ACGGAAAACAGCCTCTTTAGGCAAT..................................................................................................................... 25 0 9 0.33 3 1 1 1 0 0 0 0 0 0 0 0 0 0
...........AACGGAAAACAGCCTCTTTAGGCAATCT................................................................................................................... 28 0 9 0.33 3 3 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TTACAAGCTTGGAAAACGACGTCTGGC................................................... 27 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................AACTTACAAGATTGGAAAACGACGTCT...................................................... 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TCAACTTACAAGCTTGGAAA............................................................... 20 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................TTAGACTGTCGTTTA.......................................................................................... 15 0 6 0.33 2 0 0 0 1 1 0 0 0 0 0 0 0 0
..........................................................................ACTTACAAGCTTGGAAAACGACGTCT...................................................... 26 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................TTACAAGCTTGGAAAACGACGT........................................................ 22 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................TTAACTTACAAGCTTGGAA................................................................ 19 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................TTAACTTACAAGCTTGGAAA............................................................... 20 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................TTAACTTACAAGCTTTGAAAA.............................................................. 21 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................CTGTTATTTAGACTGT................................................................................................ 16 0 6 0.33 2 0 0 0 0 2 0 0 0 0 0 0 0 0
................................................................................ACGCTTGGAAAACGACGTCTGGCCGT................................................ 26 1 14 0.29 4 0 0 2 2 0 0 0 0 0 0 0 0 0
................................................................................AAGCTTGGAAAACGACGTCTGACCGT................................................ 26 1 14 0.29 4 0 3 0 1 0 0 0 0 0 0 0 0 0
......................GCCTCTTTAGGCAAT..................................................................................................................... 15 0 11 0.27 3 0 0 0 0 3 0 0 0 0 0 0 0 0
....................................................................................TTGGAAAACGACGTCTGGCCGTT............................................... 23 0 15 0.27 4 0 0 1 0 0 3 0 0 0 0 0 0 0
.............CGGAAAACAGCCTCTTTAGGCAATCTAGA................................................................................................................ 29 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................CCTTACCTCTAAAGCATGAAT.................... 21 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0
....................CAGCCTCTTTAGGCAATCTAGACTGTTATTT....................................................................................................... 31 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................CTTTAGGCAATCTAGACTGTCGT......................................................................................................... 23 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................ACAAGCTTGGAAAACGACGTCTGGCCGTT............................................... 29 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................CAGCCTCTTTAGGCAATCTAGACTGTTATT........................................................................................................ 30 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................CTCTTTAGGCAATCTAGACTGTCGT......................................................................................................... 25 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................TTTCCTTACCTCTAAAGCATGAAT.................... 24 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................CAAGCTTGGAAAACGAGGTCTGGCCGT................................................ 27 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
........................CTCTTTAGGCAATCTAG................................................................................................................. 17 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................CTTTAGGCAATCTAG................................................................................................................. 15 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................TTCTTTAGGCAATCTAGACTGTTATT........................................................................................................ 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................CAGCCTCTTTAGGCAATCTAGACTAT............................................................................................................ 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................TACAGCCTCTTTAGGCAATCTAGACT.............................................................................................................. 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................AAGGCAATCTAGACTGTTAT......................................................................................................... 20 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................AATCTAGACTGTTATTTAGACTGTCGA............................................................................................. 27 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................CAGCCTCTTTAGGCAATCTAGACT.............................................................................................................. 24 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
............................TTAGGCAATCTAGACTGTTATTTAG..................................................................................................... 25 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............CGGAAAACAGCCTCTTTAGGCAATCTAGACTG............................................................................................................. 32 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................CTAGAGTGTTATTTAGACTGTCGT............................................................................................. 24 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................ACAAGATTGGAAAACGACGTCTGGCCGT................................................ 28 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................TAGGCAATCTAGACTGTTATT........................................................................................................ 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................AGGCAATCTAGACTGTTATTTATACTGT................................................................................................ 28 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................GCCTCTTTAGGCAATCTAGACTGTTAT......................................................................................................... 27 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................AGGCAATCTAGACTGTTATTT....................................................................................................... 21 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................ACAGCCTCTTTAGGCAATCTAGACTGTTATT........................................................................................................ 31 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TTTCCTTACCTCTAAAGCATGAATA................... 25 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................TTTCCTTACCTCTAAAGCATGAA..................... 23 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................CTTTAGGCAATCTAGACTGTTAT......................................................................................................... 23 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................TTTAGGCAATCTAGACTGTTA.......................................................................................................... 21 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................TCTAGACTGTTATTTAGACTGTCGTT............................................................................................ 26 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................ATTAGGCAATCTAGACTGTTATT........................................................................................................ 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................ACAGCCTCTTTAGGCAATCTAGACT.............................................................................................................. 25 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................TAGCCTCTTTAGGCAATCTAGACTGTT........................................................................................................... 27 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................TTAGGCAATCTAGACTGTTATTTAGAC................................................................................................... 27 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................AAGGCAATCTAGACTGTT........................................................................................................... 18 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................ACAAGCTTGGAAAACGACGTCTGGCCATT............................................... 29 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....................CAGCCTCTTTAGGCAATCTAGACTGTTATG........................................................................................................ 30 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................AGGCAATTTAGACTGTTATTTAGACTGT................................................................................................ 28 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................TCTTTAGGCAATCTAGACTGTCGT......................................................................................................... 24 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................ACTCTTTAGGCAATCTAGACTGTTATTT....................................................................................................... 28 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................AGCCTCTTTAGGCAATCTAGACTGTCGT......................................................................................................... 28 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................AAAACAGCCTCTTTAGGCAATCTAGACTGT............................................................................................................ 30 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................TCTTGAGGCAATCTAGACTGTTATT........................................................................................................ 25 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................TTTAGGCAATCTAGACTGTTAGT........................................................................................................ 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................CAATCTAGACTGTTATTTAGACTGTCGT............................................................................................. 28 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................TTTAGGCAATCTAGACTGT............................................................................................................ 19 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................AAACAGCCTCTTTAGGCAATCTAGACTGT............................................................................................................ 29 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................CTAGACTGTTATTTAGACTGTCGT............................................................................................. 24 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
................AAAACAGCCTCTTTAGGCGATCTAGACT.............................................................................................................. 28 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................ACAGCCTCTTTAGGCAATCTAGACTGTCGT......................................................................................................... 30 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................ACTTTAGGCAATCTAGACTGTCGT......................................................................................................... 24 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................CTTTAGGCAATCTAGACTGTCGTTT....................................................................................................... 25 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................CAAGATTGGAAAACGACGTCTGGCCAT................................................ 27 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................TTTTTAGGCAATCTAGACTGTTAT......................................................................................................... 24 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................TAGCCTCTTTAGGCAATCTAGA................................................................................................................ 22 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................TTTTCCTTACCTCTAAAGCATGAAT.................... 25 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................CTAGACTGTTATTTAGACTGTCGTT............................................................................................ 25 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................TAGACTGTTATTTAGACTGTCGTT............................................................................................ 24 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....................CAGCCTCTTAAGGCAATCTAGACTG............................................................................................................. 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................CAAGCTTTGAAAACGACGTCTGGCCGT................................................ 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................TAGGCAATCTAGACTGTTAT......................................................................................................... 20 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................AGCCTCTTTAGGCAATCTAGACTGT............................................................................................................ 25 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................TCTCTAGGCAATCTAGACTGTTATT........................................................................................................ 25 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................CCTCTTTAGGCAATTTAGACTGTTATT........................................................................................................ 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................AGGCAATCTAGACTGTTATT........................................................................................................ 20 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........TTAACGGAAAACAGCCTCTTTAGGCAA...................................................................................................................... 27 0 8 0.25 2 0 0 0 1 1 0 0 0 0 0 0 0 0
...............................................................................CAAGATTGGAAAACGACGTCTGGCCGTT............................................... 28 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................ACAGCCTCTTTGGGCAATCTAGACTGTT........................................................................................................... 28 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................TTAGGCAATCTAGACTGTTAT......................................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................CTCTTTAGGCAATCTAGACTCTTATT........................................................................................................ 26 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........TTAACGGAAAACAGCCTCTTTAGGCAAT..................................................................................................................... 28 0 8 0.25 2 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................AGGCAATCTAGACTGTTAGATAGAC................................................................................................... 25 2 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................AACGACGTCTGGCCGTT............................................... 17 0 17 0.24 4 0 0 0 0 4 0 0 0 0 0 0 0 0
..................................................................................GCTTGGAAAACGACGTCTGGCCGTT............................................... 25 0 13 0.23 3 0 0 2 0 0 0 0 0 0 0 1 0 0
....GGAAATTAACGGAAAACAGCCTCT.............................................................................................................................. 24 0 9 0.22 2 0 2 0 0 0 0 0 0 0 0 0 0 0
...........AACGGAAAACAGCCTCTTTAGGCAAT..................................................................................................................... 26 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ACCTCTAAAGCATGAATA................... 18 0 9 0.22 2 0 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................................AGCTTTGAAAACGACTTCTGGCCGT................................................ 25 2 14 0.21 3 0 0 2 1 0 0 0 0 0 0 0 0 0
.........................................ACTGTTATTTAGACTGTCGTTTTACTT...................................................................................... 27 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................TTAAGCCTCTTTAGGCAATCTAGACTGTT........................................................................................................... 29 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................TGTTATTTAGACTGTCGTTTAAC........................................................................................ 23 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................ACAAGCTTGGAAAACGACGTCTGGC................................................... 25 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................TTATTTAGACTGTCGTTT........................................................................................... 18 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
................................GCAATCTAGACTGTTATTTAGACTGT................................................................................................ 26 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................CAAGCTTGGAAAACGACGT........................................................ 19 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................AACAAGATTGGAAAACGACGTCTGGCCGT................................................ 29 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................ATTTAGGCAATCTAGACTGTTATTT....................................................................................................... 25 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................AAAACGACGTCTGGCCGTT............................................... 19 0 15 0.20 3 0 1 0 0 2 0 0 0 0 0 0 0 0
...........................................................................TACACAAGCTTGGAAAACGACGTCTGGC................................................... 28 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................TAGACTGTCGTTTAACTT...................................................................................... 18 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................TACAAGCTTGGAAAACGACGTCTG..................................................... 24 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................CTGTTATTTAGACTGTCGTTT........................................................................................... 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................ACAAGCTTGGAAAACGACGT........................................................ 20 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................AGACTGTTATTTAGACTGTCGTTTATCT....................................................................................... 28 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................TGTTATTTAGACTGTCGT............................................................................................. 18 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................CCATACCTCTAAAGCATGAAAAA.................. 23 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................AGACTGTTATTTAGACTGTCGTTTAA......................................................................................... 26 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................GCAGGTTATTTAGACTGTCGTTTAA......................................................................................... 25 3 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................TATTTAGACTGTCGTTT........................................................................................... 17 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................TCTAGACTGTTATTTAGACTG................................................................................................. 21 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................CTGTTATTTAGACTGTCGATTAAC........................................................................................ 24 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................CAAGCTTGGAAAACGACGTCTGGCCGTC............................................... 28 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................ATAGGCAATCTAGACTG............................................................................................................. 17 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................ATAGGCAATCTAGACTGTTATTTAG..................................................................................................... 25 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................TGGAAAACGACGTCTGGCCGT................................................ 21 0 16 0.19 3 0 0 0 0 3 0 0 0 0 0 0 0 0
.......................................AGACTGTTATTTAGACTGT................................................................................................ 19 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................AAGCTTGGAAAACGACGTCTGGCCATT............................................... 27 1 13 0.15 2 0 0 0 2 0 0 0 0 0 0 0 0 0
................................................................................AAGCTTGGAAGACGACGTCTGGCCGTT............................................... 27 1 13 0.15 2 0 0 2 0 0 0 0 0 0 0 0 0 0
................................................................................AAGCTTGGAAACCGAAGTCTGGCCGTT............................................... 27 2 13 0.15 2 0 0 2 0 0 0 0 0 0 0 0 0 0
.................................................................................AACTTGGAAAACGACGTCTGGCCGT................................................ 25 1 14 0.14 2 0 0 0 0 0 2 0 0 0 0 0 0 0
................................................................................AAGCTTGGAAAACGAGGTCTGGCCGT................................................ 26 1 14 0.14 2 0 0 0 1 0 1 0 0 0 0 0 0 0
.............................................................................................................TTTTCCGTACCTCTAAAGCATGAAT.................... 25 1 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................AAGCTTGGAAAACGACGTCTGGCCG................................................. 25 0 14 0.14 2 0 0 0 0 0 2 0 0 0 0 0 0 0
..........TAACGGAAAACAGCCTCTTTAG.......................................................................................................................... 22 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........CTAACGGAAAACAGCCTCTTTAGGCAAT..................................................................................................................... 28 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........TAACGGAAAACAGCCTCTTTAGGCAATCT................................................................................................................... 29 0 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................ATTGGAAAACGACGTCTGGCCGT................................................ 23 1 16 0.13 2 0 0 0 0 0 2 0 0 0 0 0 0 0
..........TAACGGAAAACAGCCTCTTTAGG......................................................................................................................... 23 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................TTGGAAAACGACGTCTGGCC.................................................. 20 0 16 0.13 2 0 0 0 0 1 0 0 0 0 0 1 0 0
..........TAACGGAAAACAGCCTCTTTAAGACAT..................................................................................................................... 27 3 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......AATTAACGGAAAACAGCCTCTTTAGGCA....................................................................................................................... 28 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........TTACGACAAACAGCCTCTTTAGGCAA...................................................................................................................... 26 3 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........TAACGGAAAACAGCTTCTTTAGGCA....................................................................................................................... 25 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........TAACGGAAAACAGCCTCTTTA........................................................................................................................... 21 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................TACCTCTAAAGCATGAA..................... 17 0 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........AAACGGAAAACAGCCTCTTTAGGCAAT..................................................................................................................... 27 1 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........AAAGGAAAACAGCCTCTTTAGGCAAT..................................................................................................................... 26 1 9 0.11 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...............GAAAACAGCCTCTTTAGGCAATCT................................................................................................................... 24 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TACCTCTAAAGCATGA...................... 16 0 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............CGGAAAACAGCATCTTTAGGCAATCT................................................................................................................... 26 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................CTCTAAAGCATGAAT.................... 15 0 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............CGGAAAACAGCCTCTTTAGGC........................................................................................................................ 21 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............GGAAAACAGCCTCTT............................................................................................................................. 15 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................ACGACGTCTGGCCGT................................................ 15 0 18 0.11 2 1 0 0 0 1 0 0 0 0 0 0 0 0
.............CGGAAAACAGCCTCTTTAG.......................................................................................................................... 19 0 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....GGAAATTAACGGAAAACAGCCTC............................................................................................................................... 23 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................CAGCCTCTTTAGGCAATCT................................................................................................................... 19 0 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....GGAAATTAACGGAAAACAGC.................................................................................................................................. 20 0 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....GGAAATTAACGGAAAA...................................................................................................................................... 16 0 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................AACTCTAAAGCATGAAT.................... 17 1 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................CAGCCTCTTTAGGCAAT..................................................................................................................... 17 0 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....GGAAATTAACGGAAAACAG................................................................................................................................... 19 0 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................CTGTTATTTAGATTGTCGTTTAAC........................................................................................ 24 1 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................AGACTGTTAGCTAAACTGTC............................................................................................... 20 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................CCTCTTTAGGCAATC.................................................................................................................... 15 0 11 0.09 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................CTGTTATTTAGAGTGTCGTTTAAC........................................................................................ 24 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................CTCTTTAGGCAATCCA.................................................................................................................. 16 1 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................AGCTTGGAAGACGACGTCTGGCCGTT............................................... 26 1 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................AAGCTTGGAAAACGACGTCTGACCGTT............................................... 27 1 13 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................CTTGGAAAACGACGTCTGGCCGTT............................................... 24 0 13 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................AGCTTGGAAAACGACGTCTGACCGTT............................................... 26 1 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................AGCTTTGAAAACGACTTCTGGCCGTT............................................... 26 2 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................AGCTCGGAAAACGACGTCTGGCCGT................................................ 25 1 14 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................CGCTTGGAAAACGACGTCTGGCCGT................................................ 25 1 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................AAGCTTTGAAAACGACGTCTGGCCGT................................................ 26 1 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................TAAGCTTGGAAAACGACGTCTGGCCGT................................................ 27 1 14 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................CTTGGAAAACGACGTCTGGCC.................................................. 21 0 14 0.07 1 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................AAGCTTGGAAAACGACGTCTGGCCT................................................. 25 1 14 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................AAGCTTTGAAAACGACTTCTGGCCGT................................................ 26 2 14 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................AGCTTGGAAAACGACGTCTGACCGT................................................ 25 1 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................AAGCTTGGAAACCGAAGTCTGGCCGT................................................ 26 2 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................GAGCTTGGAAAACGACGTCTGGCCGT................................................ 26 1 14 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................CTTGGAAAACGACGTCTGGCCG................................................. 22 0 14 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................AAGCTTGGAAAACGACGTCTTGCCGT................................................ 26 1 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................GCTTGGAAAACGACGTCTGGCCGT................................................ 24 0 14 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................AGCTTGGAAGACGACGTCTGGCCGT................................................ 25 1 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........TTAACGGAAAACAGC.................................................................................................................................. 15 0 15 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................TGGAAAACGAGGTCTGGCCGTT............................................... 22 1 15 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................TTGGAAAACGACGTCTGGCCT................................................. 21 1 16 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................TGGAAAACGACGTCTGGCC.................................................. 19 0 16 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................AGTTGGAAAACGACGTCTGGCCG................................................. 23 2 16 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................ATGGAAAACGACGTCTGGCCGT................................................ 22 1 16 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................AAGCTTGGAAGACGACGTCTGGC................................................... 23 1 16 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:23094528-23094681 + dsi_382 ATTAC--------CTTTAATTGCCTTT-TGTCGGA--GAAA-TCCG--TTAGATCTG-AC------------AATAAATCTGACAGCAAATTGAACAAAATTGAATGTTCGAACCTTTTGCTGCA-GACCGGCAACTAAAAGG-A-A-TGGA--GATTTCGTACTTATTTTATAA--GTT-----------GGTCGCTGA
droSec2 scaffold_847:4183-4336 - ATTTC--------CTTTAATTGCCTTT-GGTCGGA--GAAA-TCCG--TTAGATCTG-AC------------AATAAATCTGACAGCAAATTGAACGAAATTGGATGTTCGAACCTTTTGCTGCA-GACCAGCAATTAAAAGG-A-A-TGGA--GATTTCGTACTTATCTTATAA--GTT-----------GGTCGCTGA
dm3 chr2RHet:1864328-1864480 + ATTTC--------CTTTAATTGCCTTT-TGTCGGA--GAAA-TCCG--TTAGATCTG-AC------------AATAAATCTGACAGCAAATTGAACGAAATTGGATGTTCGAACCT-TTGCTGCA-GACCGGCAATTAAAAGG-T-A-TGGA--GATTTCGTACTTATCTTATAA--GTT-----------GGTCGCTGA
droYak3 v2_chr3R_random_170:148820-148973 + ATTTT--------CTTTAATTGCCTTT-TGTCGGA--GAAA-TCCG--TTAGATTTG-AC------------AATAAATCTTACAGCAAATTGAACGAAATTGGATTTTCGAACCTTTTGCTGCA-GACCGGCAATTAAAAGG-A-A-TGGA--AATTTCGTACTTATCTTATAA--TTT-----------GTTCGCTGG
droEug1 scf7180000408824:10367-10538 + AT-----------CTCAAACTGCCGTTGTGTCGGA--AAAC-TCGGACTTGGAGTTG-ACACGGAAGG----AAAAAATCTTGCAGCGTA-TGAACGAAATTTAATGTTCGGACCA-CTGCTGAA-GACCGGCAGAAAGATGG-AGA-CGGAAAACTGTCGTACTTATCTTTTGACGGAACA--CTGCC--GGGAACTGC
droTak1 scf7180000414257:6164-6332 - AATA---------TATTAAATGCCGTTGCGTCGGATTAAAA-TCTGTTTTCGATTTAGAC------------AAGAAATCATACAACAAATTGAACGAAATGGG--GTTCGAACAACTGGCTGTATGACCGGCAAATAATAAC-A-ATTGGA--AA--TGGAACTTAGCTGC-AGCGGTTCAAGCCACCGTACGCGCTGG
droEle1 scf7180000491270:11029-11189 - AAAACTTGAAGT-TATTGATTGCCGTAATGTCGGATTGAAA-TCGGAATTTGATTTG-ACATG-----------AATATCATCCAGAAAGTAAGACGAAATTGTATATTCGAAACACTTACTGGA-GACCGGCAATTAATAA------TT----TATTTCGAACTTATCTTGCT---GTT-----------GTATGTTGA
droRho1 scf7180000780169:148-303 + TTAA---------TTTTTATTGCCGTT--GTCGGA--TTAA-TCGGAGTTTGATTTT-AG-------------ACATATCATACAGAAAGTCAAACGAAACGGAGTTTTCGATGGC-TGACTGAT-GACCGGCAATTAAATAA-ATT-TTATATAAGTTCGTACTTATCTTGTGGTAATT-----------TGCCGCTG-
droKik1 scf7180000301789:3031-3183 + ATT----------CCTCAACTGCCGTTGTGTCAGG--AAAACTCGGACTTGGAGTCG-ACAC----------GGAAAATCTTGCAGCAGACTGAACGAAATTTAATGTTCGGACCA-CTGCTGAA-GATCGCCAGAGAGGGGGGGGA-CGGA--ATGCTCGTACTTATCTT--------T-----------GGTGGAGAA
droBip1 scf7180000395807:32381-32555 + ATTA---GAAAATCTCAAACTGCCGTTGTGTCGGA--AAAA-TCGGACTTGGAGTTG-ACGCGGTAGGAAAAAACAAATCTTGCAGCAGTGTGAACAAAATTTAATGTTCGGACCA-CTGCTGAT-GACCGGCAGAGAGACGG-AGA-CGGATAAATTTCGTACTTATCTTTTG---GCG-----------GAACAATGC
droWil2 scf2_1100000002919:2805-2864 - ATT---------------------------------------------------------------------------------------------------GAACCTCTGAGTCTCTTACCACT-GGTGGGGG----AA--------------AACTACAGAGTTCTTT----------------------TTTATCGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATTAC--------CTTTAATTGCCTTT-TGTCGGA--GAAA-TCCG--TTAGATCTG-AC------------AATAAATCTGACAGCAAATTGAACAAAATTGAATGTTCGAACCTTTTGCTGCA-GACCGGCAACTAAAAGG-A-A-TGGA--GATTTCGTACTTATTTTATAA--GTT-----------GGTCGCTGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCG.....................................................................2316331.7553080036002020481816033851792000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGG....................................................................2414319.29447000161800172144355743402817840000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGGC...................................................................251477.50108500927002361592384630327760000
..........................................................................................................GTTCGAACCTTTTGCTGCA-GACCGG....................................................................25470.2528100110008750024712000
................TAATTGCCTTT-TGTCGGA--GAAA-TC............................................................................................................................................................24839.38315000000018541204110000
.................................................TAGATCTG-AC------------AATAAATCTGACAGCAAAT.............................................................................................................29436.751470000000865560000000
....................TGCCTTT-TGTCGGA--GAAA-TCCG--TTAGA...................................................................................................................................................27933.893050000008313542373050000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGT....................................................................241526.20393000000000110235156000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACC......................................................................221621.75348019100576510198115000
................TAATTGCCTTT-TGTCGGA--GAAA-TCC...........................................................................................................................................................25819.5015600000001302240000000
.......................................................TG-AC------------AATAAATCTGACAGCAAATTGAA.........................................................................................................27516.2081000000000110709000
..........................................................................................................GTTCGAACCTTTTGCTGCA-GACCG.....................................................................24514.2071000000020300579000
.................................................TAGATCTG-AC------------AATAAATCTGACAGC.................................................................................................................25414.00560000000196310000000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGA....................................................................241512.331850000001000009589000
...........................................................................................................TTCGAACCTTTTGCTGCA-GAC.......................................................................211611.2518000614002000004784000
.....................................................TCTG-AC------------AATAAATCTGACAGCAAAT.............................................................................................................25510.2051000100000000437000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGGCA..................................................................261410.001400006003027111030503000
.........................................................................................................TGTTCGAACCTTTTGCTGCA-GACCGGC...................................................................2747.2529000000371510120000
..........................................................................................................GTTCGAACCTTTTGCTGCA-GACCGGC...................................................................2646.7527000000265200120000
................TAATTGCCTTT-TGTCGGA--GAAA-TCCG--TTAGA...................................................................................................................................................3186.3851000000249000000000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGGA...................................................................25146.36890001000020005036000
..........................................................................................................GTTCGAACCTTTTGCTGCA-GACCGT....................................................................2545.5022000000000000202000
..................................................AGATCTG-AC------------AATAAATCTGACAGCAAAT.............................................................................................................2845.2521000000222150000000
........................................................................................................................................TAAAAGG-A-A-TGGA--GATTTCGTACT...................................2444.501800100005345000000
.....................................................TCTG-AC------------AATAAATCTGACAGCAAATT............................................................................................................2654.2021000000000000147000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGGCAA.................................................................27134.15540032003691300144000
.................................................TAGATCTG-AC------------AATAAATCTGACAGCAAA..............................................................................................................2844.001600000006090010000
.................................................................................................................................................................TACTTATTTTATAA--GTT-----------GGTCGCTGA2624.00800000044000000000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGTA...................................................................25153.93590000000000001742000
.....................................................TCTG-AC------------AATAAATCTGACAGCAAA..............................................................................................................2453.601800000001030095000
.........................................................................................................TGTTCGAACCTTTTGCTGCA-GACCGG....................................................................2643.501400000011130062000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACA......................................................................22163.50560000000000002234000
.....................................................TCTG-AC------------AATAAATCTGACAGCAAATTGA..........................................................................................................2853.401700000007150031000
............................................................................................................TCGAACCTTTTGCTGCA-GACCGG....................................................................23143.2946003200908012093000
............................................................................................................TCGAACCTTTTGCTGCA-GACCG.....................................................................22163.2552000439010003032000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGTT...................................................................25153.13470000000000001532000
................TAATTGCCTTT-TGTCGGA--GAAA-TCCG--T.......................................................................................................................................................2783.1325000000012075100000
.....................................................TCTG-AC------------AATAAATCTGACAGCAAATTGAA.........................................................................................................2953.001500000000000069000
..........................................................................................................GTTCGAACCTTTTGCTGCA-GACC......................................................................2352.801400000013010090000
.....................................................TCTG-AC------------AATAAATCTGACAGCAA...............................................................................................................2352.8014000000000000104000
............................................CG--TTAGATCTG-AC------------AATAAATCTGA.....................................................................................................................2452.8014000000010130000000
............................TGTCGGA--GAAA-TCCG--TTAGATCTG-..............................................................................................................................................2442.7511000001100000000000
............................................................................................................TCGAACCTTTTGCTGCA-GAC.......................................................................20162.6943000040000001002000
...........................................................................................................TTCGAACCTTTTGCTGCA-GA........................................................................20162.6342000000100030632000
.................................................TAGATCTG-AC------------AATAAATCT.......................................................................................................................1952.6013000001200010000000
..................................................................................................................................................................ACTTATTTTATAA--GTT-----------GGTCGCTGA2522.50500000050000000000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGGT...................................................................25142.43340000000121101910000
.................................................TAGATCTG-AC------------AATAAATCTG......................................................................................................................2052.4012000001200000000000
.......................................................TG-AC------------AATAAATCTGACAGCAAATTGA..........................................................................................................2652.401200000000110091000
............................................CG--TTAGATCTG-AC------------AATAAATCT.......................................................................................................................2252.4012000012000000000000
.................................................TAGATCTG-AC------------AATAAATCTGAC....................................................................................................................2252.4012000012000000000000
.................................................TAGATCTG-AC------------AATAAATC........................................................................................................................1852.4012000012000000000000
...................TTGCCTTT-TGTCGGA--GAAA-TCCG--TTAGA...................................................................................................................................................2892.3321000000413130000000
...............................................................................................................AACCTTTTGCTGCA-GACCG.....................................................................19182.2841000041000000000000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCA.....................................................................23162.2536000000000000306000
.................................................TAGATCTG-AC------------AATAAATCTGACAGCA................................................................................................................2642.25900000004140000000
......................................................CTG-AC------------AATAAATCTGACAGCAAATTGA..........................................................................................................2752.001000000090100000000
........................................................................................................................................TAAAAGG-A-A-TGGA--GATTTCGTACTT..................................2542.00800000000062000000
..........................................TCCG--TTAGATCTG-AC------------AATAAATCTGA.....................................................................................................................2642.00800000032300000000
..........................................................................................................GTTCGAACCTTTTGCTGCA-GACCGGA...................................................................2642.00800000000000080000
........................TTT-TGTCGGA--GAAA-TCCG--T.......................................................................................................................................................1991.7816000000013003000000
.........................................................................................................TGTTCGAACCTTTTGCTGCA-GACCGGCAA.................................................................2941.75700000002020030000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCT.....................................................................23161.7528000000000000721000
..........................................................................................................GTTCGAACCTTTTGCTGCA-GACCGGCAA.................................................................2841.75700000001010050000
............................................................................................................TCGAACCTTTTGCTGCA-GACCGGC...................................................................24141.712400530081105010000
.....................................................................................................TGAATGTTCGAACCTTTTGCTGCA-GA........................................................................2631.67500000011020010000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGAT...................................................................25151.6024000000000000159000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACT......................................................................22161.562500000060700039000
..........................................................................................................GTTCGAACCTTTTGCTGCA-GACCGA....................................................................2541.50600000000000033000
..........................................................................................................GTTCGAACCTTTTGCTGCA-GAC.......................................................................2251.40700000000010051000
................TAATTGCCTTT-TGTCGGA--GAAA-T.............................................................................................................................................................2381.381100000006030020000
...........................................................................................................TTCGAACCTTTTGCTGCA-GAA.......................................................................21161.2520000000000000515000
........................TTT-TGTCGGA--GAAA-TCCG--TTAGA...................................................................................................................................................2391.221100000011711000000
................TAATTGCCTTT-TGTCGGA--GAAA-TCCG--TT......................................................................................................................................................2881.13900000008010000000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGTTT..................................................................26151.0716000000000000214000
.....................................................TCTG-AC------------AATAAATCTGACAGCAAATTA...........................................................................................................2751.00500000000000050000
................................................TTAGATCTG-AC------------AATAAATCTGACAGC.................................................................................................................2641.00400000003010000000
........................................A-TCCG--TTAGATCTG-AC------------AATAAATCTGA.....................................................................................................................2741.00400000021100000000
..............................TCGGA--GAAA-TCCG--TTAGATCTG-AC------------AAT.............................................................................................................................2741.00400000000400000000
.....................................................TCTG-AC------------AATAAATCTGACAGCA................................................................................................................2251.00500000000000032000
..............................................................................TCTGACAGCAAATTGAACAAAATTGAA...............................................................................................2721.00200000000110000000
.....................................................................................................TGAATGTTCGAACCTTTTGCTGCA-GAA.......................................................................2731.00300000001000020000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGAA...................................................................25150.931400000000000077000
.....................GCCTTT-TGTCGGA--GAAA-TCCG--TTAGA...................................................................................................................................................2690.89800000031400000000
.........................................................................................................TGTTCGAACCTTTTGCTGCA-GACCG.....................................................................2550.80400000000000040000
.....................................................TCTG-AC------------AATAAATCTGACAGCAAATA............................................................................................................2650.80400000000000031000
.....................................................TCTG-AC------------AATAAATCTGACAGCAAAA.............................................................................................................2550.80400000000000031000
....................TGCCTTT-TGTCGGA--GAAA-TCCG--T.......................................................................................................................................................2390.78700000000006010000
.......................CTTT-TGTCGGA--GAAA-TCCG--T.......................................................................................................................................................2090.78700000007000000000
.................................................TAGATCTG-AC------------AATAAATCTGACAGCAA...............................................................................................................2740.75300000001000020000
..............TTTAATTGCCTTT-TGTCGGA--GAAA-..............................................................................................................................................................2480.75600000012021000000
..........................................................................................................GTTCGAACCTTTTGCTGCA-GACCGGCA..................................................................2740.75300000001000020000
...............TTAATTGCCTTT-TGTCGGA--GAAA-TC............................................................................................................................................................2580.75600000001410000000
..............TTTAATTGCCTTT-TGTCGGA--GAAA-TC............................................................................................................................................................2680.75600000021021000000
.............................................................................................................CGAACCTTTTGCTGCA-GACCGGC...................................................................23140.711000000032101021000
.......................CTTT-TGTCGGA--GAAA-TCCG--TT......................................................................................................................................................2190.67600000003210000000
........................TTT-TGTCGGA--GAAA-TCCG--TT......................................................................................................................................................2090.67600000006000000000
........................TTT-TGTCGGA--GAAA-TCCG--........................................................................................................................................................1890.67600000004002000000
.............................................................................................................CGAACCTTTTGCTGCA-GACCGG....................................................................22140.64900000000001026000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGGAT..................................................................26140.64900000000000054000
..........................................................................................................GTTCGAACCTTTTGCTGCA-GACA......................................................................2350.60300000000000030000
.......................................................TG-AC------------AATAAATCTGACAGCAAATA............................................................................................................2450.60300000000000003000
..........................................................................................................GTTCGAACCTTTTGCTGCA-GACCA.....................................................................2450.60300000000000030000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACAA.....................................................................23160.56900000000000045000
.............................................................................................................CGAACCTTTTGCTGCA-GACCG.....................................................................21160.56900000000000036000
....................TGCCTTT-TGTCGGA--GAAA-TCCG--TTAGAA..................................................................................................................................................2890.56500000011120000000
....................TGCCTTT-TGTCGGA--GAAA-TCC...........................................................................................................................................................2190.56500000000000050000
....................TGCCTTT-TGTCGGA--GAAA-TCCG--TT......................................................................................................................................................2490.56500010000001021000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGATT..................................................................26150.53800000000000035000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCTT....................................................................24150.53800000000000017000
.........................................................................................................TGTTCGAACCTTTTGCTGCA-GACCGT....................................................................2640.50200000000000011000
................................................................................................................................CCGGCAACTAAAAGG-A-A-TGGA--GATTTC........................................2720.50100010000000000000
..........................................TCCG--TTAGATCTG-AC------------AATAAATCTG......................................................................................................................2540.50200000000200000000
...........................................................................................................................................AAGG-A-A-TGGA--GATTTCGTACTTATT...............................2520.50100000000001000000
..................................................................................................................................................A-TGGA--GATTTCGTACTTATT...............................2020.50100000000001000000
.........................TT-TGTCGGA--GAAA-TCCG--TTAGATCTG-A.............................................................................................................................................2740.50200000010010000000
.........................................................................................................................TGCA-GACCGGCAACTAAAAGG-A-A-TGGA--G.............................................2820.50100000001000000000
.....................................................................................................................TTGCTGCA-GACCGGCAACTAAAAGG-A-A-....................................................2720.50100000000010000000
..........................................................................................................GTTCGAACCTTTTGCTGCA-GACCGTT...................................................................2640.50200000000000020000
..........................................................AC------------AATAAATCTGACAGCAAATTGAACAAA.....................................................................................................2920.50100000001000000000
.....................................................................................................................................................................TATTTTATAA--GTT-----------GGTCGCTGA2220.50100000010000000000
...........................................................................................TGAACAAAATTGAATGTTCG.........................................................................................2020.50100000000001000000
........................................................................................................................................TAAAAGG-A-A-TGGA--GATTTCGTAC....................................2340.50200000000020000000
........................................................................................................................................TAAAAGG-A-A-TGGA--GATTTCGT......................................2140.50200000000002000000
.............................................................................ATCTGACAGCAAATTGAACAAAATTGA................................................................................................2720.50100000010000000000
.....................................................................................................................................AACTAAAAGG-A-A-TGGA--GATTTCGTAC....................................2620.50100000000001000000
................................................................................TGACAGCAAATTGAACAAAATTGAATA.............................................................................................2720.50100000000100000000
........................................................................................................................................TAAAAGG-A-A-TGGA--GATTTCGTACTTATT...............................2820.50100000000010000000
..........................................................................TAAATCTGACAGCAAATTGAACAAAA....................................................................................................2620.50100000000100000000
..............................................................................TCTGACAGCAAATTGAACAAAAA...................................................................................................2320.50100000000000010000
................................................................................TGACAGCAAATTGAACAAAATTGAATGT............................................................................................2820.50100000000100000000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGGCAAC................................................................2820.50100000000010000000
...........................................................................................................TTCGAACCTTTTGCTGCA-GAAA......................................................................22160.50800000000000026000
..............................................................................TCTGACAGCAAATTGAACAAAATTGAAT..............................................................................................2820.50100000000000010000
.........................................................................................................................TGCA-GACCGGCAACTAAAAGG-A-A-TGGA--GAT...........................................3020.50100000001000000000
.........................................................................................................TGTTCGAACCTTTTGCTGCA-GACCGGCA..................................................................2840.50200000001000010000
......................................................................................................................................ACTAAAAGG-A-A-TGGA--GATTTCGTACT...................................2620.50100000000001000000
...................TTGCCTTT-TGTCGGA--GAAA-TCCG--T.......................................................................................................................................................2490.44400000000004000000
....................TGCCTTT-TGTCGGA--GAAA-TC............................................................................................................................................................2090.44400000000000022000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACTT.....................................................................23160.44700000000000016000
........................................................................................................................................TAAAAGG-A-A-TGGA--GATT..........................................1750.40200000000002000000
.......................................................TG-AC------------AATAAATCTGACAGCAAATTGAAC........................................................................................................2850.40200000000000020000
.........................................................................................................TGTTCGAACCTTTTGCTGCA-GACC......................................................................2450.40200000001000010000
.......................................................TG-AC------------AATAAATCTGACAGCAAATTGAG.........................................................................................................2750.40200000000000020000
.......................................................TG-AC------------AATAAATCTGACAGCAAATTG...........................................................................................................2550.40200000000110000000
.....................................................TCTG-AC------------AATAAATCTGACAGCAAATTG...........................................................................................................2750.40200000000010010000
.......................................................TG-AC------------AATAAATCTGACAGCAAATTGAAA........................................................................................................2850.40200000000000011000
............................................CG--TTAGATCTG-AC------------AATAAATCTGAC....................................................................................................................2550.40200000000020000000
............................................................................................................TCGAACCTTTTGCTGCA-GACCGGCA..................................................................25140.36500010020101000000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGGCAT.................................................................27140.36500000000000041000
.....................................................................................................TGAATGTTCGAACCTTTTGCTGCA-GACA......................................................................2830.33100000000010000000
....................................................................................................TTGAATGTTCGAACCTTTTGCTGCA-GAC.......................................................................2830.33100000010000000000
.....................................................................................................TGAATGTTCGAACCTTTTGCTGCA-GAC.......................................................................2730.33100000000001000000
.........................................................................................................................TGCA-GACCGGCAACTAAAAGG-A-A-A...................................................2430.33100000000010000000
...................................................................................................ATTGAATGTTCGAACCTTTTGCTGC............................................................................2530.33100000001000000000
....................TGCCTTT-TGTCGGA--GAAA-TCCG--TTAG....................................................................................................................................................2690.33300000010100010000
.......................CTTT-TGTCGGA--GAAA-TCC...........................................................................................................................................................1890.33300000003000000000
.....................................................................................................TGAATGTTCGAACCTTTTGCTGC............................................................................2330.33100000000001000000
.....................................................................................................TGAATGTTCGAACCTTTTGCTGCA-GACC......................................................................2830.33100100000000000000
.....................................................................................................TGAATGTTCGAACCTTTTGCTGCA-..........................................................................2430.33100000001000000000
........................TTT-TGTCGGA--GAAA-TCCG--TTAGAT..................................................................................................................................................2490.33300000000102000000
....................................................................................................TTGAATGTTCGAACCTTTTGCTGCA-..........................................................................2530.33100000000010000000
.......................CTTT-TGTCGGA--GAAA-TCCG--........................................................................................................................................................1990.33300000003000000000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGAAT..................................................................26150.33500000000000041000
....................................................................................................TTGAATGTTCGAACCTTTTGCTGCA-GA........................................................................2730.33100000000100000000
...........................................................................................................TTCGAACCTTTTGCTGCA-GAT.......................................................................21160.31500000000000014000
...........................................................................................................TTCGAACCTTTTGCTGCA-..........................................................................18170.29500000000005000000
..........................................TCCG--TTAGATCTG-AC------------AATAAATCTGAA....................................................................................................................2740.25100000010000000000
.................................................TAGATCTG-AC------------AATAAATCTGACAG..................................................................................................................2440.25100000001000000000
........................................................................................................................................TAAAAGG-A-A-TGGA--GATTTCGTACTTAT................................2740.25100000000010000000
..........................................................................................................................................AAAGG-A-A-TGGA--GATTTCGTACTTA.................................2440.25100000000001000000
.........................................................................................................TGTTCGAACCTTTTGCTGCA-GACCGGT...................................................................2740.25100000001000000000
..........................................................................................................GTTCGAACCTTTTGCTGCA-GACCGGT...................................................................2640.25100000000000010000
.......................................AA-TCCG--TTAGATCTG-AC------------AATAAA..........................................................................................................................2340.25100000001000000000
...............................CGGA--GAAA-TCCG--TTAGATCTG-AC------------AA..............................................................................................................................2540.25100000000000010000
..........................................TCCG--TTAGATCTG-AC------------AATAAATC........................................................................................................................2340.25100100000000000000
..........................T-TGTCGGA--GAAA-TCCG--TTAGATCTG-A.............................................................................................................................................2640.25100000000001000000
...............................CGGA--GAAA-TCCG--TTAGATCTG-AC------------AATAA...........................................................................................................................2840.25100000000000010000
...............................CGGA--GAAA-TCCG--TTAGATCTG-AC------------AAT.............................................................................................................................2640.25100000000100000000
.................AATTGCCTTT-TGTCGGA--GAAA-TC............................................................................................................................................................2380.25200000010010000000
........................................................................................................................................TAAAAGG-A-A-TGGA--GATTTCGTT.....................................2240.25100000000100000000
............................................................................................................................................AGG-A-A-TGGA--GATTTCGTACTT..................................2140.25100000000001000000
..............................TCGGA--GAAA-TCCG--TTAGATCTG-AC------------AA..............................................................................................................................2640.25100000000000010000
..........................................................................................................................................AAAGG-A-A-TGGA--GATTTCGTACTTAT................................2540.25100000000000001000
.........................TT-TGTCGGA--GAAA-TCCG--TTAGATCTG-AC------------................................................................................................................................2840.25100000010000000000
................................................TTAGATCTG-AC------------AATAAATCTGACAGCAAAT.............................................................................................................3040.25100000001000000000
.................................................TAGATCTG-AC------------AATAAATCTGACAGT.................................................................................................................2540.25100000001000000000
.................................GA--GAAA-TCCG--TTAGATCTG-AC------------AATAAA..........................................................................................................................2740.25101000000000000000
..........................................TCCG--TTAGATCTG-AC------------AATAAAA.........................................................................................................................2240.25100000000100000000
........................................................................................................................................TAAAAGG-A-A-TGGA--GATTTCGTTA....................................2340.25100000000001000000
.........................TT-TGTCGGA--GAAA-TCCG--TTAGATCTG-..............................................................................................................................................2640.25100000000001000000
..........................................................................................................GTTCGAACCTTTTGCTGCA-GACCGGAT..................................................................2740.25100000000000010000
........................................................................................................................................TAAAAGG-A-A-TGGA--GATTTCGTAT....................................2340.25100000010000000000
............................TGTCGGA--GAAA-TCCG--TTAGATCTG-AC------------................................................................................................................................2640.25100000000100000000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACG......................................................................22160.25400000000000013000
.........................TT-TGTCGGA--GAAA-TCCG--TTAGATC.................................................................................................................................................2440.25100000000100000000
..........................................................................................................GTTCGAACCTTTTGCTGCA-GACCGTA...................................................................2640.25100000000000010000
droSec2
ATTTC--------CTTTAATTGCCTTT-GGTCGGA--GAAA-TCCG--TTAGATCTG-AC------------AATAAATCTGACAGCAAATTGAACGAAATTGGATGTTCGAACCTTTTGCTGCA-GACCAGCAATTAAAAGG-A-A-TGGA--GATTTCGTACTTATCTTATAA--GTT-----------GGTCGCTGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................TAATTGCCTTT-GGTCGGA--GAAA-TCCG--T.......................................................................................................................................................2711.0011000
............................................................................................................................................................TTTCGTACTTATCTTATAA--GTT-----------GGTC.....26200.1533000
.....................................................................................................................................AATTAAAAGG-A-A-TGGA--GAAAA.........................................21200.0510010
............................................................................................................................................................TTTCGTACTTATCTTATAA--GTT-----------GGTCGC...28200.0511000
.............................................................................................................................................................TTCGTACTTATCTTATAA--GTT-----------GGTC.....25200.0511000
dm3
ATTTC--------CTTTAATTGCCTTT-TGTCGGA--GAAA-TCCG--TTAGATCTG-AC------------AATAAATCTGACAGCAAATTGAACGAAATTGGATGTTCGAACCT-TTGCTGCA-GACCGGCAATTAAAAGG-T-A-TGGA--GATTTCGTACTTATCTTATAA--GTT-----------GGTCGCTGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................TGTTCGAACCT-TTGCTGCA-GACCGGC...................................................................2620165.2033040000000000000000000000010000000000000030602010101000000000000000000000000000000000000000000000002000000000000000100400000000000000146215642072213500106003111035600000000000000000000000000000000001130300004161105445957500000000000200220367168153554311948400000000000000000000100000000000000000000000000000000000000500000108410000002511000000000000001301000000
..................................................................................................AATTGGATGTTCGAACCT-TT.................................................................................2020116.602332000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000459296295223105700000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TTGGATGTTCGAACCT-TTGCTGCA-GA........................................................................2620113.05226100000000000000000000000000000000000000100000011000301000012100000000000000000000003000400000000000000000000000100001000000000000002210413100000104370510263100000000000000000000000000000000050301001003871711475801202023600020012304614814384195196200000000000000000000000000000000000000000000000000000000000012001014082702000034181100000000000000215169000000
.................................................TAGATCTG-AC------------AATAAATCTGACAGC.................................................................................................................2520104.602092000000000000000000000000000002000000000000000010000000000000000000000000000000000050203000000000000000000000001110000000000000060000076930171565301400000101200000000000000000000000002000000000000000000000084000000000000000000940501590620000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TGCCTTT-TGTCGGA--GAAA-TCCG--T.......................................................................................................................................................232098.25196500000000000000000000020100000000000000372050051000000170000000000000000000000000000000016000000000000100000020000000200000000000000000000000000100544000001950000264000000000000000000000000000000000000034014020000000000001243570039113000000000000300000000000200000000000000000000000000000000000000004000000000000100400000000000000000000000000000054200000
.........................................................................................................TGTTCGAACCT-TTGCTGCA-GACCGG....................................................................252071.9514390000000000000000000000000000000000000000202000100000200000020000000000000000000000031010000000000000000000001000000100000000000000300164316132001000044131210385400000000000000000000000000000000000400011008956313523421000000000300054794551258359630000000000000000000000000000000000000000000000000000000000000000005010000001126000000000000000100000000
.....................................................................................................TGGATGTTCGAACCT-TTGCTGCA-GA........................................................................252056.2511250000000010000000000001000000010000001000101010000000000001100000000000000000000000300020000000006000000000000000100300000000000000101011902013050003741104062000000000000000000000100000000000102080000010028362013700001020000000114844895217102022000000000100000000000000000000000000000000000000000000000001110000141600000014111000000000000002443000003
...........................................................................................TGAACGAAATTGGATGTTCGAACCT-T..................................................................................262048.659730000000000000000000000100000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201121400050300102010030000000000000000000000000000000000000020000000514941571311000003000010001313157915571628000000000000000000000000000000000000000000000000000000000000000001100000000010000000000000000000000000
..................................................................................................AATTGGATGTTCGAACCT-T..................................................................................192042.05841000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307154208172000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTGCCTTT-TGTCGGA--GAAA-TCCG--T.......................................................................................................................................................242039.557910000000000000000000008000000000000009099210007000000000000000000000000000000000000000000000001000000000000000010000000000000000000000000000000035000434500062002300000000000000000000000000000000000000000026700000000006000000000000030140000000003000000000000000000000000000000000020002000000000000000020842100000000065000001000010200000000000
...................................................................................................ATTGGATGTTCGAACCT-TTGCTGCA-GA........................................................................272039.50790000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000020001800020000001131011000000000000000000000000000000000000000000000117171136400200100000000012313371718010110000000000000000000000000000000000000000000000000000000000010000013011000000031000000000000001743000000
....................TGCCTTT-TGTCGGA--GAAA-TCCG--TTAGA...................................................................................................................................................272038.107620000000000000000000000170000000000000000001112013000410120660000000000000000000000000000000000000000000000000000001000000000000000000000000000000050000000000000000000000000000000000000000000000000000000002612000200000003200025000000500000000000001500000000000000000000000000000000020000000000000000002001001010000000103000000002000000000013000000
................TAATTGCCTTT-TGTCGGA--GAAA-TCCG--T.......................................................................................................................................................272028.205640000000000000000000000000000000000001300000000000000000000000000000000000000000000000040000000001100000000000000030000000000000000000000000000000013002480000000000000000000000000000000000000000032200000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000230010001717270000000000000000000000001652210000000
.........................................................................................................TGTTCGAACCT-TTGCTGCA-GACCGGCA..................................................................272027.20544000000000000000000000001000000000000000000000000000000000010000000000000000000000020000000000000000000000000000000000000000000000010022041001000000000000000000000000000000000000000000000000000010000058462440171000000000000000231420335362019000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................GAAATTGGATGTTCGAACCT-T..................................................................................212026.3552700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000077881005519800000000000000010111003000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................TAGATCTG-AC------------AATAAATCTGACAGCA................................................................................................................262026.3552700000010000000000000005000000000000000002000000004000000000000000000000000000000003001600000000000000000000000002000000000000000000001001000800400160169021201500000000000000000000001000000000004000200000000000400000000000006071661459123732000000000000000000000000000000000000000000000000000000000004000002024000000000000000000000000000000000
.................................................................................................AAATTGGATGTTCGAACCT-T..................................................................................202025.055010000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000009258557321800000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................AAATTGGATGTTCGAACCT-TT.................................................................................212024.104820000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000008880703817900010000000000002001016000000000000000000000000000000000000000000000000190000000000000000200000000000000000000000000000000000
.....................GCCTTT-TGTCGGA--GAAA-TCCG--TTAGA...................................................................................................................................................262022.90458000000000000000000000290000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000002014000000000000114133000000000000000000000000000000000316089000000000000000000000001800070013000000000003000000000000000001000000000000000000001000000000000000000000020000000000000000000003007000000
.....................................................................................................TGGATGTTCGAACCT-TTGCTGCA-GACC......................................................................272021.7043400000000000000000000011000000000000000000000001000000000001000000000000000000000000100400000000000000000000110000003000000000000001000520002000011000000201000000000000000000000000000000000001000000025174040000000000000000832623582493213000000000000000000000000000000000000000000000000000000000000000000100000000101000000000000001010000000
.....................................................................................................TGGATGTTCGAACCT-TTGCTGCA-GAC.......................................................................262021.604320000000000000000000001000000000000000000000000000000000001210000000000000000000000400110000000001000100000000000000000000000000000300051000401000000000000300000000000000000000000000000000000000000002520111134000000000000000623132079382420000000000000000000000000000000000000000000000000000000000003000000001000000311000000000000000100000005
....................................................................................................TTGGATGTTCGAACCT-TTGCTGCA-GAC.......................................................................272021.15423000000001000000000000000000000000000000000001000001000000211000000000000000000000000001000000000000000000000000000010000000000000010007100010000000100010010000000000000000000000000000000000010000000461811650010000000000000612613062404016000000000000000000000000000000000000000000000000000000000001000000300000000300000000000000000110000001
.............................................................................................AACGAAATTGGATGTTCGAACCT-T..................................................................................242020.7541500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000001000000101000000000000000000000000000000000000000000000000022141210440000000000020003407680812193000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000
...........................................................................................TGAACGAAATTGGATGTTCGAACCT-TT.................................................................................272018.6537300000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000002101000000000000000000000000000000000000000000000000011903250000000000020005907099744351000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
.........................................................................................................TGTTCGAACCT-TTGCTGCA-GACCG.....................................................................242016.103220000000000000000000000200000000000000010001001100000100001110000000000000000000000200110000000001000000000000000000000000000000000001043100000103001021027110000000000000000000000000000000003010004000387626500000000001000190146352016190000000001000000000000000000000000000000000000000000000000000000037020000002728000000000000000000000000
.........................................................................................................TGTTCGAACCT-TTGCTGCA-GACCGGCAAT................................................................292015.85317000000000000000000000000000000000000100000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000007022014000000000000000000000000000000000000000000000000000100000001000100000040000000044210160581940000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012
...........................................................................................................TTCGAACCT-TTGCTGCA-GACCGGC...................................................................242014.652930000000000000000000000000000000000000000110010100000000000100000000000000000000000100000000000000000000000000000000000000000000000001071000502000000000000100000000000000000000000000000000000100000036621125100000000000000214521236322723000000000000000000000000000000000000000000000000000000000000000000200000000410000000000000000100000000
....................TGCCTTT-TGTCGGA--GAAA-TCCG--TTA.....................................................................................................................................................252014.0528100000020010000000000000400000000000001001300000000200140000000000000000000000000000012000000000001000000000000000100000000000000000000000000000016050514000003102100000000000000000000000000000000000000740020000000000000000000000020001000000000000000000000000000000000000000000000000000000000000010000007000000003516000000000000000000000000
.............................................................................................AACGAAATTGGATGTTCGAACCT-TT.................................................................................252013.30266000000000000000000000010000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201000000033010000000000000000000000000000000000000000000000000148107280200000000000002314537422591000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................GAAATTGGATGTTCGAACCT-TT.................................................................................222012.90258000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000502852378800000000000000000000002000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................TGTTCGAACCT-TTGCTGCA-GACC......................................................................232012.5525100000000000000000000000000000000000000001000000000000000000000000000000000000000000300100000000000000000000000000000000000000000001000810001010000000000130000000000000000000000000000000000000000000016969481000000000000001537872617523000000000000000000000000000000000000000000000000010000000000000000100000000100000000000000000000000000
...................................................................................................ATTGGATGTTCGAACCT-TTGCTGCA-..........................................................................252012.102420000000000000000000000000000000000000000001000000010000000000000000000000000000000000020000000000000000000030000000200000000000000000060000000000010200324000000000000000000000000000000000010200100003313101037000000000002000120822916900000000000000000000000000000000000000000000000000000000000000000012010000000960000000000000000110000000
....................................................................................................TTGGATGTTCGAACCT-TTGCTGCA-GACC......................................................................282011.5023000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000110001000000000000000000000000000000000000000000000000000000000020420600000000000000038151435241255000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................TGAACGAAATTGGATGTTCGAACC.....................................................................................242011.45229000000010000000000000100000000000000000000000000000000000000000000000000000000000020000000000000000000000000001000000000000000000013134151321024011001130000000000000000000000000000000000000000000020000077793400000064000000116123051340000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000
....................TGCCTTT-TGTCGGA--GAAA-TCCG--TTAG....................................................................................................................................................262011.302260000000000000000000000000000000000000000030000000000400000000000000000000000000000700070000000000000000000000000000300000000000000000000000000420019160000038000000000000000000000000000000000000023018001000000000131000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000
.............................................................................................................................................................TTCGTACTTATCTTATAA--GTT-----------GGTCGC...272011.302260000000000000000000000000000000000000001021000000900810000000000000000000000000000900190000000000000000000000002300000000000000000110000010050000000006000011100000000000000000000000000000000000000000800000000400000000000003301700609000000003000000000000000000000000000000000000000000000000001000000010000000050000000000000000112000000
.........................................................................................................TGTTCGAACCT-TTGCTGCA-GACCGGCAA.................................................................282011.2522500000000000000000000001000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001010371800000000100000000000000000000000000000000000000000000010000000411023000000000000001175534730168000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003
..........................................TCCG--TTAGATCTG-AC------------AATAAATCTGA.....................................................................................................................262010.6021200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117030000000000000000000000000000000000000000000000000000000000000030100000000000000001425644450131000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TTTCGTACTTATCTTATAA--GTT-----------GGT......252010.352070000000000000000000000100000000000000000501030001090110000000000000000000000000000800040000000000000000000000000100000000000000000000000000008100236030200000000000000000100000000000000000000100000000000000000000000000031113918000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................TTGGATGTTCGAACCT-TTGCT..............................................................................21209.701940000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000300000000000000000000000000000000000000000003228209460000000000000000111210110000000000000000000000000000000000000000000025001220000000000000000301000000100000000000000000000000000
.................................................................................................................................................................TACTTATCTTATAA--GTT-----------GGTCGCTGA26209.651930000001100000000000000200000000000000013000000020100000000000000000000000000000000017073000000102000000000000080000005000000000000000000000600000000128010018040000000000000000000000000000000000000000001010000000000000005510000001031000000000000000000000000000000000000000000000000000000000000000000000000000720000000000000000000000000
...................................................................................................ATTGGATGTTCGAACCT-TTGCTGC............................................................................24209.201840000000000000000000002010000000000000000110000100010000001000000000000000000000000000020000000001000000000000000000000000000000000300141000000000010000113000000000000000000000000000000000000203000002575711000000000001001305115165000000000000000000000000000000000000000000000000000000000000610000050100000001656000000000000000200000000
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....................................................................................................TTGGATGTTCGAACCT-TTGC...............................................................................20201.102200000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004401200000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................GTTCGAACCT-TTGCTGCA-GACCGG....................................................................24201.10220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000001114100000000000000021004200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................AAATTGGATGTTCGAACCT-TTGCT..............................................................................24201.05210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000004000000000000000000000000000000000000003000002000201000000000000010102010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................................................................TCTGACAGCAAATTGAACGAAATTGG................................................................................................26201.05210000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000001000001000000000000000000000100000000000200244100000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TGTTCGAACCT-TTGCTGCA-GACCGGATC.................................................................28201.052100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.........................................................................................................................................AAAAGG-T-A-TGGA--GATTTCGTA.....................................21201.05210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000002000000100000000000000000000000000000000000000000000000000000000000180000000000000000007000000000001000000000000000000000
................................................................................................GAAATTGGATGTTCGAACCT-TTGCTG.............................................................................26201.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000000000000000000000000000010000000000000000000000000000030306210000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000
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..................................................AGATCTG-AC------------AATAAATCTGACAGC.................................................................................................................24201.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200030000800000000000000000000000000000000000000000000000000003000000000000000000000000010210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.........................................................................................................TGTTCGAACCT-TTGCTGCA-GACCGGCAT.................................................................28200.90180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000001200500000000000000002000023000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................................................................................................GATGTTCGAACCT-TTGCTGCA-..........................................................................21200.90180000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102001000000000000000000000000000000000000000000000000150000000000000001012000000000000000000000000100000000
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.......................................................................................................GATGTTCGAACCT-TTGCTGCA-GA........................................................................23200.85170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000300000000000000010402110000000000000000000000000000000000000000000000000000000000000000000100000000020000000000000000000000000
...............................................................................................CGAAATTGGATGTTCGAACCT-T..................................................................................22200.85170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002410600000000000000000000103000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..................................................................................................AATTGGATGTTCGAACCT-TTG................................................................................21200.85170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000001000380000000000000000200000000001000000000000000000000000
.................................................TAGATCTG-AC------------AATAAATCTGACAGCATC..............................................................................................................28200.851700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................................................................................................GAACCT-TTGCTGCA-GACCGGC...................................................................21200.80160000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104332000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
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.....................................................................................................................TTGCTGCA-GACCGGCAATTAAAAGG-T-......................................................26200.751500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015
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.........................................................................................................TGTTCGAACCT-TTGCTGCA-GACCGGCTC.................................................................28200.75150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009200400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.........................................................................................ATTGAACGAAATTGGATGTTCGAACC.....................................................................................26190.74140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000020440102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................................TAGATCTG-AC------------AATAAATCTGACAGCAT...............................................................................................................27200.70140000000000000000000000000000000000000010000000000100000000000000000000000000000000000000000000000000000000001000000000000000000000000040000000000000000000500000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TT-TGTCGGA--GAAA-TCCG--TTAGATC.................................................................................................................................................24200.70140000000000000000000000000000000000000010002000100000000000000000000000000000000000000200000000000000000000000000000000000000000000300000010000000000020000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................TAAATCTGACAGCAAATTGAAC........................................................................................................22200.651300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................................TAGATCTG-AC------------AATAAATCTGACA...................................................................................................................23200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020000300000000000000000000000000000000000000000000000000000000000000000000000000000010000105000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TAATTGCCTTT-TGTCGGA--GA.................................................................................................................................................................20200.65130000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000
...................................................................................................ATTGGATGTTCGAACCT-TTGCTGCA-GT........................................................................27200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002400300000000000000010003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................CCGGCAATTAAAAGG-T-A-TGGA--GATT..........................................25200.65130000000000000000000000000000000000001000000000000000000000000000000000000000000000320000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000001000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000
..............................................................................................ACGAAATTGGATGTTCGAACCT-TTGC...............................................................................26200.65130000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000100000000100000000000000000000000000000000000000000000000000000000000300010120100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GATGTTCGAACCT-TTGCTGCA-GAC.......................................................................24200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002030000000000000000010301201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................................................................................................GATGTTCGAACCT-TTGCTGCA-GACCGGC...................................................................28200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000201000000000000000000000002310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................................................................................CGAAATTGGATGTTCGAACCT-TTGCTGC............................................................................28200.60120000000000000000000000100000000000000000000000001000010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000015000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................CGAACCT-TTGCTGCA-GACCGGCAATT...............................................................26200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001403102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................TCTG-AC------------AATAAATCTGACAGCAAATTG...........................................................................................................27200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102300000000000000000000000000000000000000000000000000000000000000000000000000000000000021102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................TCGGA--GAAA-TCCG--TTAGATCTG-AC------------A...............................................................................................................................25200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000001000500000000000000000102110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................TCGGA--GAAA-TCCG--TTAGATCTG-AC------------AATA............................................................................................................................28200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000010110100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...........................................CCG--TTAGATCTG-AC------------AATAAATCTGA.....................................................................................................................25200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000400400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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........................................................................................AATTGAACGAAATTGGATGTTCGA........................................................................................24200.55110000000000000000000001000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100100000000000000000000000000000000000000000000000000000000000100400000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GCAAATTGAACGAAATTGGAT..............................................................................................21200.551100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TGTCGGA--GAAA-TCCG--TTAGATCTG-..............................................................................................................................................24200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000001001310220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droYak3
ATTTT--------CTTTAATTGCCTTT-TGTCGGA--GAAA-TCCG--TTAGATTTG-AC------------AATAAATCTTACAGCAAATTGAACGAAATTGGATTTTCGAACCTTTTGCTGCA-GACCGGCAATTAAAAGG-A-A-TGGA--AATTTCGTACTTATCTTATAA--TTT-----------GTTCGCTGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................TTACAGCAAATTGAACGAAATTGGATT.............................................................................................272015.35307017271000000262
....................................................................................................TTGGATTTTCGAACCTTTTGCTGCA-GA........................................................................27206.051210030000000118
.................................................................................TACAGCAAATTGAACGAAATTGGATT.............................................................................................26202.9058099100000039
................................................................................TTACAGCAAATTGAACGAAATTGGA...............................................................................................25202.75550224000000029
................................................................................TTACAGCAAATTGAACGAAATTGGAT..............................................................................................26200.9519011200000006
.....................................................................................................TGGATTTTCGAACCTTTTGCTGCA-GA........................................................................26200.901809810000000
..............................................................................TCTTACAGCAAATTGAACGAAATTGGA...............................................................................................27200.9018018000000000
..............................................................................TCTTACAGCAAATTGAACGAAATTGGAT..............................................................................................28200.8016030000000013
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGGCAAT................................................................28200.551109100000001
..............................................................................TCTTACAGCAAATTGAACGAAATTGGATT.............................................................................................29200.551100400000007
................TAATTGCCTTT-TGTCGGA--GAAA-TCCG--T.......................................................................................................................................................27200.501006030100000
..............................................................................TCTTACAGCAAATTGAACGAAATTGG................................................................................................26200.501008110000000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGGCA..................................................................26200.45909000000000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGGC...................................................................25200.35705110000000
.............................................................................................AACGAAATTGGATTTTCGAACCTTTT.................................................................................26200.35700000000007
.........................................................................................................TTTTCGAACCTTTTGCTGCA-GACCGGC...................................................................27200.35706100000000
..........................................................................................TTGAACGAAATTGGATT.............................................................................................17200.30600000000006
................TAATTGCCTTT-TGTCGGA--GAAA-TC............................................................................................................................................................24200.30601300020000
.TTTT--------CTTTAATTGCCTTT-TGTCGGA--GAAA-..............................................................................................................................................................29200.30600000000006
...........................................................................................TGAACGAAATTGGATTTTCGAACCTTT..................................................................................27200.25502300000000
....................................................................................................TTGGATTTTCGAACCTTTTGCTGCA-..........................................................................25200.25503010000001
............................................................................................................................................................TTTCGTACTTATCTTATAA--TTT-----------GTTCGC...2880.25202000000000
............................................................................................................................................................TTTCGTACTTATCTTATAA--TTT-----------GTT......2580.25202000000000
....................................................................................................TTGGATTTTCGAACCTTTTGCT..............................................................................22200.20400000000004
..........................................................................TAAATCTTACAGCAAATTGAACGAAAT...................................................................................................27200.20404000000000
.........................................................................................................TTTTCGAACCTTTTGCTGCA-GACC......................................................................24200.20413000000000
................................................................................................................................................................GTACTTATCTTATAA--TTT-----------GTTCGCTGG2760.17101000000000
.................................................................................................................................................................TACTTATCTTATAA--TTT-----------GTTCGCTG.2560.17101000000000
..........................................................................................................TTTCGAACCTTTTGCTGCA-GACCGGC...................................................................26200.15302100000000
..........................T-TGTCGGA--GAAA-TCCG--TTAGATTTG-AC------------................................................................................................................................27200.10200200000000
.......................................................................................................................................TTAAAAGG-A-A-TGGA--AATTTCGTACT...................................25200.10200200000000
.........................................................................................................TTTTCGAACCTTTTGCTGCA-GAC.......................................................................23200.10202000000000
................TAATTGCCTTT-TGTCGGA--GAAA-TCCG--TT......................................................................................................................................................28200.10200100010000
................TAATTGCCTTT-TGTCGGA--GAAA-TCCG--........................................................................................................................................................26200.10200000020000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGGCAA.................................................................27200.10202000000000
..........................................................................................TTGAACGAAATTGGATTTTCGAACCT....................................................................................26200.10200200000000
.....................................................................................................TGGATTTTCGAACCTTTTGCTGCA-G.........................................................................25200.10202000000000
.........................................................................................................TTTTCGAACCTTTTGCTGCA-GACCGGCA..................................................................28200.10202000000000
....................................................................................................TTGGATTTTCGAACCTTTTGCTGC............................................................................24200.10201100000000
....................TGCCTTT-TGTCGGA--GAAA-TCCG--TTA.....................................................................................................................................................25200.10201000010000
................................................................................TTACAGCAAATTGAACGAAATTGGATTT............................................................................................28200.10200100000001
....................TGCCTTT-TGTCGGA--GAAA-TCCG--TTAG....................................................................................................................................................26200.10200010010000
....T--------CTTTAATTGCCTTT-TGTCGGA--GAAA-..............................................................................................................................................................26200.10202000000000
.................AATTGCCTTT-TGTCGGA--GAAA-TCCG--TT......................................................................................................................................................27200.05100100000000
.................................GA--GAAA-TCCG--TTAGATTTG-AC------------AATAAA..........................................................................................................................27200.05100100000000
.................................................................................TACAGCAAATTGAACGAAATTGGATTT............................................................................................27200.05101000000000
..........................................................................................TTGAACGAAATTGGATTTTCGAACC.....................................................................................25200.05100100000000
.......................................................................................................................................TTAAAAGG-A-A-TGGA--AATTTCGTACTC..................................26200.05101000000000
.........................................................................................................TTTTCGAACCTTTTGCTGC............................................................................19200.05100100000000
.................................................................................TACAGCAAATTGAACGAAATTGG................................................................................................23200.05101000000000
............................................................................................................TCGAACCTTTTGCTGCA-GACCGGCAG.................................................................26200.05101000000000
................................................................................TTACAGCAAATTGAACGAAATTGGAC..............................................................................................26200.05100100000000
.....................................................................................................TGGATTTTCGAACCTTTTGCTGCA-GAC.......................................................................27200.05101000000000
................................................................................TTACAGCAAATTGAACGAAAC...................................................................................................21200.05100100000000
...........................................................C------------AATAAATCTTACAGCAAATTGAACG.......................................................................................................26200.05100010000000
...................TTGCCTTT-TGTCGGA--GAAA-TCCG--TT......................................................................................................................................................25200.05100100000000
....................TGCCTTT-TGTCGGA--GAAA-TCCG--TTAGAT..................................................................................................................................................28200.05100100000000
.........................................................................................................................TGCA-GACCGGCAATTAAAAGG-A-A-TGG.................................................26200.05100100000000
...................TTGCCTTT-TGTCGGA--GAAA-TCCG--T.......................................................................................................................................................24200.05100010000000
...................................................................................................ATTGGATTTTCGAACCTTTTGCTGCA-GA........................................................................28200.05100000000001
..............................................................................TCTTACAGCAAATTGAACGAAATTG.................................................................................................25200.05101000000000
...............TTAATTGCCTTT-TGTCGGA--GAAA-TCCG--C.......................................................................................................................................................28200.05100100000000
..........................................................................................TTGAACGAAATTGGATTTTCGAACCTTT..................................................................................28200.05101000000000
................................................................................TTACAGCAAATTGAACGAAATTGGATA.............................................................................................27200.05100000000001
..........................................................................................................TTTCGAACCTTTTGCTGCA-GACCGGCAAT................................................................29200.05100100000000
..................................................................................................AATTGGATTTTCGAACCTTTTGCT..............................................................................24200.05100100000000
............................................................................................GAACGAAATTGGATTTTCGAACCTTT..................................................................................26200.05101000000000
................................................................................TTACAGCAAATTGAACGAAATTGGATC.............................................................................................27200.05100100000000
...............TTAATTGCCTTT-TGTCGGA--GAAA-TCCG--T.......................................................................................................................................................28200.05100000010000
....................................................................................................TTGGATTTTCGAACCTTTTGCTGCA-G.........................................................................26200.05101000000000
....................................................................................................TTGGATTTTCGAACCTTTTGCTG.............................................................................23200.05101000000000
........................................A-TCCG--TTAGATTTG-AC------------AATAAATCT.......................................................................................................................25200.05100100000000
.........................................................................................ATTGAACGAAATTGGATTTTCGAACC.....................................................................................26200.05100100000000
..............TTTAATTGCCTTT-TGTCGGA--GAAA-TCC...........................................................................................................................................................27200.05101000000000
.......................CTTT-TGTCGGA--GAAA-TCCG--TTAGATT.................................................................................................................................................26200.05101000000000
..........................................TCCG--TTAGATTTG-AC------------AATAAATCTTA.....................................................................................................................26200.05101000000000
...............................................................................CTTACAGCAAATTGAACGAAATTGGA...............................................................................................26200.05101000000000
..........................................................................................................TTTCGAACCTTTTGCTGCA-GACCGG....................................................................25200.05101000000000
.......................................AA-TCCG--TTAGATTTG-AC------------AATAAATC........................................................................................................................25200.05100100000000
.....................................................................................GCAAATTGAACGAAATTGG................................................................................................19200.05100010000000
..............................................................................TCTTACAGCAAATTGAACGAAAT...................................................................................................23200.05100100000000
......................................................................................................GGATTTTCGAACCTTTTGCTGCA-GA........................................................................25200.05101000000000
..........................................................................TAAATCTTACAGCAAATTGAACGAAAA...................................................................................................27200.05100100000000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACCGG....................................................................24200.05101000000000
....................................................................................................TTGGATTTTCGAACCTTTTGCTGCA-GACC......................................................................29200.05100000000001
...........................................................................................TGAACGAAATTGGATTTTCGAACCT....................................................................................25200.05100100000000
.........................................................................................................TTTTCGAACCTTTTGCTGCA-GACCGG....................................................................26200.05101000000000
..............................TCGGA--GAAA-TCCG--TTAGATTTG-AC------------AA..............................................................................................................................26200.05101000000000
............................................................................AATCTTACAGCAAATTGAACGAAAT...................................................................................................25200.05100100000000
...........................................................................................................TTCGAACCTTTTGCTGCA-GACC......................................................................22200.05101000000000
...............................................................................................CGAAATTGGATTTTCGAACCTTTTGC...............................................................................26200.05100100000000
.......................................................................................AAATTGAACGAAATTGGATTTTCGAACCT....................................................................................29200.05100100000000
...................................................................................................ATTGGATTTTCGAACCTTTTGCTGCA-..........................................................................26200.05101000000000
....................................................................................................TTGGATTTTCGAACCTTTTGCTGCA-GAC.......................................................................28200.05101000000000
...................................................................................CAGCAAATTGAACGAAATTGGATT.............................................................................................24200.05100100000000
........................................A-TCCG--TTAGATTTG-AC------------AATAAATC........................................................................................................................24200.05100100000000
droEug1
AT-----------CTCAAACTGCCGTTGTGTCGGA--AAAC-TCGGACTTGGAGTTG-ACACGGAAGG----AAAAAATCTTGCAGCGTA-TGAACGAAATTTAATGTTCGGACCA-CTGCTGAA-GACCGGCAGAAAGATGG-AGA-CGGAAAACTGTCGTACTTATCTTTTGACGGAACA--CTGCC--GGGAACTGCSizeHit CountTotal NormTotal
No Reads
droTak1
AATA---------TATTAAATGCCGTTGCGTCGGATTAAAA-TCTGTTTTCGATTTAGAC------------AAGAAATCATACAACAAATTGAACGAAATGGG--GTTCGAACAACTGGCTGTATGACCGGCAAATAATAAC-A-ATTGGA--AA--TGGAACTTAGCTGC-AGCGGTTCAAGCCACCGTACGCGCTGGSizeHit CountTotal NormTotal
No Reads
droEle1
AAAACTTGAAGT-TATTGATTGCCGTAATGTCGGATTGAAA-TCGGAATTTGATTTG-ACATG-----------AATATCATCCAGAAAGTAAGACGAAATTGTATATTCGAAACACTTACTGGA-GACCGGCAATTAATAA------TT----TATTTCGAACTTATCTTGCT---GTT-----------GTATGTTGASizeHit CountTotal NormTotal
No Reads
droRho1
TTAA---------TTTTTATTGCCGTT--GTCGGA--TTAA-TCGGAGTTTGATTTT-AG-------------ACATATCATACAGAAAGTCAAACGAAACGGAGTTTTCGATGGC-TGACTGAT-GACCGGCAATTAAATAA-ATT-TTATATAAGTTCGTACTTATCTTGTGGTAATT-----------TGCCGCTG-SizeHit CountTotal NormTotal
No Reads
droKik1
ATT----------CCTCAACTGCCGTTGTGTCAGG--AAAACTCGGACTTGGAGTCG-ACAC----------GGAAAATCTTGCAGCAGACTGAACGAAATTTAATGTTCGGACCA-CTGCTGAA-GATCGCCAGAGAGGGGGGGGA-CGGA--ATGCTCGTACTTATCTT--------T-----------GGTGGAGAASizeHit CountTotal NormTotal
No Reads
droBip1
ATTA---GAAAATCTCAAACTGCCGTTGTGTCGGA--AAAA-TCGGACTTGGAGTTG-ACGCGGTAGGAAAAAACAAATCTTGCAGCAGTGTGAACAAAATTTAATGTTCGGACCA-CTGCTGAT-GACCGGCAGAGAGACGG-AGA-CGGATAAATTTCGTACTTATCTTTTG---GCG-----------GAACAATGCSizeHit CountTotal NormTotal
No Reads
droWil2
ATT---------------------------------------------------------------------------------------------------GAACCTCTGAGTCTCTTACCACT-GGTGGGGG----AA--------------AACTACAGAGTTCTTT----------------------TTTATCGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................CTCTGAGTCTCTTACCACT-GGTGGGG...................................................................26200.45900090
..T---------------------------------------------------------------------------------------------------GAACCTCTGAGTCTCTTACCACT-G.........................................................................25200.20404000
............................................................................................................CTGAGTCTCTTACCACT-GGTGGG....................................................................23200.20400040
............................................................................................................................T-GGTGGGGG----AA--------------AACTACAGAGTTCTT...............................26200.10202000
....................................................................................................................CTTACCACT-GGTGGGGG----AA--------------AACTA.........................................24200.05101000
...................................................................................................................TCTTACCACT-GGTGGGGG----AA--------------A.............................................21200.05101000
.............................................................................................................TGAGTCTCTTACCACT-GGTGGGGC----..............................................................24200.05100010
.............................................................................................................TGAGTCTCTTACCACT-GG........................................................................18200.05101000
...........................................................................................................TCTGAGTCTCTTACCACT-GGTGGGGG----A.............................................................27200.05100100
....................................................................................................................CTTACCACT-GGTGGGGG----AA--------------AACTACAG......................................27200.05101000

Generated: 05/15/2015 at 04:21 PM