ID:

dsi_3816

 Coordinate:

2r:7090291-7090427 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.1 -11.1 -11.0

Flybase annnotation

exon [2r_7090428_7090539_+]; CDS [2r_7090428_7090539_+]; exon [2r_7090151_7090290_+]; CDS [2r_7090151_7090290_+]; intron [2r_7090291_7090427_+]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------##################################################
AGCTGGAGAAGGAGAACCTAATGACTGAAGAGGAGCGTCAAATGTTGGAGGTAAGCTATAAATATTTATAAACTATAAAATCAGGTATCTTACAGATTTAGCACTCTTTGTACTTGAAAAATGACTTAAATAATAATATTATTATCCCTGATTCCTATCCCTAATATTCAATTTATGATTTTTACAGGATGCATTTAGTCTGATTGCCTACTCTAATCCTTGGTCCAGTCCGCTGGG
**************************************************(((((.(((((((.((((((...)))))).((((((((.....(((........)))..))))))))............((((((....))))))....(((....)))...........)))))))...)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M053
female body
 SRR902009
testis
 M025
embryo
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
................................................................................................................................................................................................ATTTAGTCTGATTGCCTACT......................... 20 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0
.....................TGACTGAAGAGGAGCGTCAAATGTT............................................................................................................................................................................................... 25 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
.............GAACCTAATGACTGAAGAGGAGCGTC...................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................CTAATGACTGAAGAGGAGC......................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CTGATTGCCTACTCTAATCCTTGGTC............ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TAGTCTGATTGCCTACTCTAATC................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................TGCATTTAGTCTGATTGGCTACTCTA...................... 26 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................AATATTATTATCCCTGATTCC.................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
....................ATGACTGAAGAGGAGC......................................................................................................................................................................................................... 16 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
......................GACTGAAGAGGAGCGTCA..................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.................CTAATGACTGAAGAGGAG.......................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................TAATGACTGAAGAGGAGC......................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................TTTTACAGGATGCATTTAGTCTGATTGC.............................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......GAAGGAGAACCTAATGACT................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................TGACTGAAGAGGAGCGTCAAAT.................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
....GGAGAAGGAGAACCTAATGACT................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................CATTTAGTCCGATTACCT............................ 18 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GTGCCTACTCTAATGCTT................ 18 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................ACAGATTTAGAGCTCTTT................................................................................................................................ 18 2 15 0.13 2 1 0 0 0 0 0 0 0 0 0 0 1
........................CTGAGAAGGAGCGTCAA.................................................................................................................................................................................................... 17 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0
.....................TGACTGAAGAGGAAC......................................................................................................................................................................................................... 15 1 16 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

TCGACCTCTTCCTCTTGGATTACTGACTTCTCCTCGCAGTTTACAACCTCCATTCGATATTTATAAATATTTGATATTTTAGTCCATAGAATGTCTAAATCGTGAGAAACATGAACTTTTTACTGAATTTATTATTATAATAATAGGGACTAAGGATAGGGATTATAAGTTAAATACTAAAAATGTCCTACGTAAATCAGACTAACGGATGAGATTAGGAACCAGGTCAGGCGACCC
**************************************************(((((.(((((((.((((((...)))))).((((((((.....(((........)))..))))))))............((((((....))))))....(((....)))...........)))))))...)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 O002
Head
 SRR902009
testis
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
................................................................................................................................................................................................................GTGAGGTTAGGGACCAGGTCA........ 21 3 1 1.00 1 0 0 1 0 0 0
............................................................................................................ACATGAACTTTTTACTGAA.............................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0
...............................................................TAAATATTTTTTATTTTAGTCCAT...................................................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
............................TCGCGTCGCAGTTTACAAC.............................................................................................................................................................................................. 19 2 3 0.33 1 0 0 0 1 0 0
..............................................................................TTAGTCCATAGAACTTCT............................................................................................................................................. 18 2 4 0.25 1 0 0 0 0 1 0
..............................................................................................................................................................................................................GGATGAGTTTAGGAA................ 15 1 10 0.10 1 1 0 0 0 0 0
.....................................................................TTTGCTATTTTAGTC......................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:7090241-7090477 + dsi_3816 AGCTGGAGAAGGAGAACCTAATGACTGAAGAGGAGCGTCAAATGTTGGAGGTAA--GCTATAAATATTTATAAACTATAAAATCAGGTATCTTACAGATTTAGCAC-----------------------------------------------TCTTTGTACTTGAAAAATGACTTAAATAATAATAT-----------------TATT---------------------------------ATCCCTGATTC-------------------------CTATCCCT---------AAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------TTCAATTTA---------------------------T--GA-TTTTTACAGGATGCATTTAGTCTGATTGCCTACTCTAATCCTTGGTCCAGTCCGCTGGG--------------------------------------------
droSec2 scaffold_1:3934548-3934784 + AGCTGGAGAAGGAGAACCTAATGACTGAAGAGGAGCGTCAAATGTTGGAGGTAA--ACTATAAATATTTATAAACAATAAAATCAGGTATCTTACAGACCTAGCTC-----------------------------------------------TGTTTATACTTGAAAAATTACTTCAATAATAATAT-----------------TATT---------------------------------ATCCCTAATTC-------------------------CTATCCCT---------AAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------TTCAATTTA---------------------------T--GG-TTGTTGCAGGATGCATTTAGTCTGATTGCTTACTCTAATCCTTGGTCCAGTCCGCTGGG--------------------------------------------
dm3 chr2R:6322241-6322472 + AGCTGGAGAAGGAGAACCTAATGACTGAAGAGGAGCGTCAAATGTTGGAGGTAA--ACTATAAAAATGTATAAACAATAGAAACTGGTATCTTGCAGACTAAGCAC-----------------------------------------------TCTTTGTATTTGAAAAATAACTTCAATAAGAATAT-----------------GATT---------------------------------ATCCGTAATCG-------------------------A--------------GAGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------TTCAATTTA---------------------------T--GG-TTGTTACAGGATGCATTTAGTCTGATTGCCTACTCTAATCCTTGGTCCAGTCCGCTGGG--------------------------------------------
droEre2 scaffold_4929:8058491-8058746 - AGCTGGAGAAGGAGAACCTAATGACTGAAGAGGAGCGTCAAATGTTGGAGGTAA--ACTATTAAGATTGATATCTTAAATATGCGGGTATATCACA---------C-----------------------------------------------GATTTGTACTTCAAAAATTACTTCAATAAGAATGT-----------------TATTATTAGGAACCTTGAATGATCTTTTATCTGAGGAATCCCTACTTT-------------------------A--------------GAGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------TTAAATCTA---------------------------T--AA-TTTTTACAGGATGCATTTAGTCTGATTGCCTACTCAAATCCTTGGTCCAGTCCGCTGGG--------------------------------------------
droYak3 2L:18958617-18958913 + AGCTGGAGAAGGAAAACCTTATGACTGAAGAAGAGCGTCAAATGTTGGAGGTAA--ACTATTAATATTGATATCCTACCAAATCTGGTATTTTACAGGTTGAGGTGTGCCT--------------------------------CAAATAACAAAATTTGTATTTGGAAAATTACTTCAATATAAAATTTTTAGGAAATTGTTATTTATTGTTAGGATCTTTGAATGTTCTTTTATCTGAGTTATCCCTAATTG-------------------------A--------------GCGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------ACCAATCTA---------------------------T--AA-TTTTTACAGGATGCATTTAGTCTGATTGCGTACTCAAATCCTTGGTCCAGTCCGCTGGG--------------------------------------------
droEug1 scf7180000409672:4696120-4696278 - AGCTCGAGAAGGAGAACCTCATGACTGAAGAGGAGCGTCAAATGTTGGAGGTAT--ACTCTGAATATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAT------AAAAGATAAAAAGAT----------------------------------------------------------------------------------------------------------------TATT----------------------------------------------------------------------------------------------------------ATTTTAATTATACTTGCAGGATGCATTTAGCTTGATTGCTTACTCAAATCCCTGGTCCAGTCCGCTGGG--------------------------------------------
droBia1 scf7180000301506:12159-12335 + AGCTGGAGGAGGAGAACCGCATGACTGAAGAGGAGCGTCAAATGTTAGAGGTAC--AGTCTAGATAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGATTCCCAGCTGAGCTGGAGAT------ACTAATAAGTGAGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------CTCGATTTA---------------------------T--TGTTGCTTGCAGGATGCATTTAGCTTGATTGCCTACTCGAATCCCTGGTCCAGTCCGCTGGG--------------------------------------------
droTak1 scf7180000415683:133937-134014 - ATTCA-------ATAATCTTATAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCCAGGATGCATTTAGTTTGATTGCCTACTCAAATCCCTGGTCCAGTCCGCTGGG--------------------------------------------
droEle1 scf7180000491349:1137479-1137531 - AGCTGGAGAAGGAGAACCTCATGACTGAAGAGGAGCGTCAAATGTTGGAGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779999:448714-448834 - AGCTGGAGAAGGAGAACCTCATGACTGAAGAGGAGCGTCAAATGTTGGAGGTAC--AG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTCAGCTAGTCCCTTCTGAATTCTTAGAATGATCGATATTTCACAAAATAAGCACTATTAGT
droFic1 scf7180000454066:1363856-1364195 - AGCTGGAGAAGGAGAACCTCATGACTGAAGAGGAGCGTCAAATGTTGGAGGTAC--A-------------------------------------------------------------AATAAGATT---AAAATTAAAACGA---GTGTCAAA----------------------------------------------------------AGAAAC-----------------------------------TAG------AGTTGAGCTACAG-T------CCT---------AATATTTAATATATTTTTATTTACTTTTTATTTTAATATTTTATTTACTTAATAACTGTTTTTCAAAATTTGTATGATCTTTACGATCGAAATTCAATGTTATTCCACCATCTTA----A-TAAG-CTCATATCTTCAGTAGATTTTAAAAGAGATCTTTAAATTAAAT-G-----------------------------TA---------------------------C--TATTATTTTCAGGATGCATTTAGCTTGATTGCCTACTCAAATCCCTGGTCCAGTCCGCTGGG--------------------------------------------
droKik1 scf7180000302385:964029-964194 - AGCTGGAGAAGGAGAACCTCATGACTGAAGAAGAGCGTCAAATGTTGGAGGTAA--ACCAT----------------------------------------------GCAT--------------------------------AGATTATGCAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAACTTTGAAGTTT------------------------AATGTTGATTTTAAACTTAATTACAGGATGCATTTAGCTTGATTGCCTACTCAAATCCTTGGTCCAGTCCCTTGGG--------------------------------------------
droAna3 scaffold_13266:17791820-17791979 + AGCTGGAGAAGGAAAACCTTATGACTGAAGAGGAGCGTCAAATGTTGGAGGTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATCCAC---------TAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------TCCTTG---------------ACTTTTGTGGAGATTGTAAACGTTTTTA---TTTATTGTAGGATGCATTTAGCTTGATCGCCTACTCTAATCCCTGGTCCAGTCCGCTTGG--------------------------------------------
droBip1 scf7180000396735:1056851-1057009 + AGCTGGAGAAGGAGAACCTCATGACTGAAGAGGAGCGTCAAATGTTGGAGGTTT--G-------------------------------------------------TGCTT--------------------------------CAATTTCTTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATTTTGGAGTTTATAGCCCTTTGTA---TGTCTTGTAGGATGCATTTAGCTTGATTGCCTACTCAAACCCGTGGTCCAGTCCGCTTGG--------------------------------------------
dp5 3:16280166-16280335 - AGCTGGAAAAGGATAACCTCATGACCGAGGAGGAGCGTCAAATGTTGGAGGTAA--A-------------------------------------------------TGCCC--------------------------------CTATTATTAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCCTTCGCGCTTCCACTCTACACC------------AATTTCGATTTTA-----TTTCGCAGGATGCATTTAGCTTGATTGCCTACTCAAACCCCTGGTCCAGTCCGCTCGG--------------------------------------------
droPer2 scaffold_4:484664-484833 + AGCTGGAAAAGGATAACCTCATGACCGAGGAGGAGCGTCAAATGTTGGAGGTAA--A-------------------------------------------------TGCCC--------------------------------CTATTATTAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCCTTCGCGCTTCCACTCTACACC------------AATTTCGATTTTA-----TTTCGCAGGATGCATTTAGCTTGATTGCCTACTCAAACCCCTGGTCCAGTCCGCTCGG--------------------------------------------
droWil2 scf2_1100000004822:2473839-2473998 - AATTGGAAAAGGAGAATCTAATGACCGAGGAAGAGCGTCAAATGTTGGAGGTCA--G-------------------------------------------------------------TTTAAGTTT---GA---------GA---------------------------------------------------------------------------------------------------------------------------------GAAAC------ATAAGAAAATGAAAT----------------------------------------------------------------------------------------------------------------TCAT----------------------------------------------------------------------------------------------------------ATTTTATT-TTGCCCCCAGGATGCATTTAGTTTGATTGCGTATTCGAATCCTTGGTCCAGTCCCCTGGG--------------------------------------------
droVir3 scaffold_12875:16270719-16270891 + AGCTAGAGAAGGAGAACCTCATGACTGAAGAGGAGCGTCAAATGTTGGAGGTGC-------------------------------------------------------CTC--GCAATAACTA-TAAACTA---------AC--------------------------------------------------------------------------------------------------------------------------TAAATATGA---------------------GAT----------------------------------------------------------------------------------------------------------------TATTATTTAAA-------------------------------------------TTTATGTATATTATCCATG---------------------------------------------------AACAGGATGCATTTAGCTTGATTGCCTACTCAAATCCTTGGTCCAGCCCCTTGGG--------------------------------------------
droMoj3 scaffold_6496:7484781-7484948 - AGCTAGAGAAGGAGAACCTCATGACTGAAGAGGAGCGTCAAATGTTGGAGGTGATAG-------------------------------------------------AG-------CAATTTCAT-TA---TA---------GC--------------------------------------------------------------------------------------------------------------------------CAAGCATGAAATG-----ACTTAAAATTTGAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------------------CT----------------------------CGAATCT--------ATTTAGGATGCATTTAGCCTGATTGCCTACTCAAATCCTTGGTCCAGTCCCTTGGG--------------------------------------------
droGri2 scaffold_15245:5138773-5138945 + AGCTGGAGAAGGAGAACCTCATGACTGAAGAGGAGCGTCAAATGTTGGAGGTGC-------------------------------------------------------CTTAAGGAATAAC-----------------------------------------------------------------------------------------------------------------------------------TAAACTCTCAAAA----TGT--AT------ACAACTAAATTGCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAT-----------------------------------------------GTTTATTA-----TATTTGGCAGGATGCATTTAGCTTGATTGCCTACTCAAATCCTTGGTCCAGTCCTTTGGG--------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGCTGGAGAAGGAGAACCTAATGACTGAAGAGGAGCGTCAAATGTTGGAGGTAA--GCTATAAATATTTATAAACTATAAAATCAGGTATCTTACAGATTTAGCAC-----------------------------------------------TCTTTGTACTTGAAAAATGACTTAAATAATAATAT-----------------TATT---------------------------------ATCCCTGATTC-------------------------CTATCCCT---------AAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------TTCAATTTA---------------------------T--GA-TTTTTACAGGATGCATTTAGTCTGATTGCCTACTCTAATCCTTGGTCCAGTCCGCTGGG--------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAGTCTGATTGCCTACT.....................................................................2013.00321000000000000000
.....................TGACTGAAGAGGAGCGTCAAATGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000000000002000
.............GAACCTAATGACTGAAGAGGAGCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
.................CTAATGACTGAAGAGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATTGCCTACTCTAATCCTTGGTC........................................................2611.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTCTGATTGCCTACTCTAATC...............................................................2311.00100000000000100000
.......................................................................................................................................................................................AATAT-----------------TATT---------------------------------ATCCCTGATTC-------------------------C..................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
....................ATGACTGAAGAGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000010000000000
......................GACTGAAGAGGAGCGTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
.................CTAATGACTGAAGAGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
..................TAATGACTGAAGAGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACAGGATGCATTTAGTCTGATTGC..........................................................................2811.00100010000000000000
.......GAAGGAGAACCTAATGACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.....................TGACTGAAGAGGAGCGTCAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000010000
....GGAGAAGGAGAACCTAATGACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
droSec2
AGCTGGAGAAGGAGAACCTAATGACTGAAGAGGAGCGTCAAATGTTGGAGGTAA--ACTATAAATATTTATAAACAATAAAATCAGGTATCTTACAGACCTAGCTC-----------------------------------------------TGTTTATACTTGAAAAATTACTTCAATAATAATAT-----------------TATT---------------------------------ATCCCTAATTC-------------------------CTATCCCT---------AAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------TTCAATTTA---------------------------T--GG-TTGTTGCAGGATGCATTTAGTCTGATTGCTTACTCTAATCCTTGGTCCAGTCCGCTGGG--------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................TGAAGAGGAGCGTCAAATGTTGGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
..............AACCTAATGACTGAAGAGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
................CCTAATGACTGAAGAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...............ACCTAATGACTGAAGAGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
dm3
AGCTGGAGAAGGAGAACCTAATGACTGAAGAGGAGCGTCAAATGTTGGAGGTAA--ACTATAAAAATGTATAAACAATAGAAACTGGTATCTTGCAGACTAAGCAC-----------------------------------------------TCTTTGTATTTGAAAAATAACTTCAATAAGAATAT-----------------GATT---------------------------------ATCCGTAATCG-------------------------A--------------GAGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------TTCAATTTA---------------------------T--GG-TTGTTACAGGATGCATTTAGTCTGATTGCCTACTCTAATCCTTGGTCCAGTCCGCTGGG--------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.GCTGGAGAAGGAGAACCTAATGACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2519.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGGAGAACCTAATGACTGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CTAATGACTGAAGAGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000
.............GAACCTAATGACTGAAGAGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................TAATGACTGAAGAGGAGCGTCAAATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ACCTAATGACTGAAGAGGAGCGTCAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAAGGAGAACCTAATGACTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GAAGAGGAGCGTCAAATGTTGGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GAACCTAATGACTGAAGAGGAGCGTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................CCTAATGACTGAAGAGGAGCGTCAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GAACCTAATGACTGAAGAGGAGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GACTGAAGAGGAGCGTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGGAGAAGGAGAACCTAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GAACCTAATGACTGAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGGATGCATTTAGTCTG...............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
....................ATGACTGAAGAGGAGCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GGAGCGTCAAATGTTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTAGTCTGATTGCCTACT.....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATGACTGAAGAGGAGCGTCAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGACTGAAGAGGAGCGTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GGAGCGTCAAATGTTGGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AAGGAGAACCTAATGACTGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AATGACTGAAGAGGAGCGTCAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GAACCTAATGACTGAAGAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
............AGAACCTAATGACTGAAGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATGACTGAAGAGGAGCGTCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGTCTGATTGCCTACT.....................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTACTCTAATCCTTGGTCCA......................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------TTCAATTTA---------------------------T--GG-TTGT...................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGGAGAACCTAATGACTGAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGGAGAACCTAATGACTGAAGAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGTCTGATTGCCTACTCTAATCC..............................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------TTCAATTTA---------------------------T--GG-TTGTTA.................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGAACCTAATGACTGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCATTTAGTCTGATTGCC.........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCCTTGGTCCAGTCCGCTGG.............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...TGGAGAAGGAGAACCTAATGACTGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGAAGGAGAACCTAATGACTGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..................................................................................................................................................................................................................................................ATCCGTAATCG-------------------------A--------------GAGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------TTCAAT...........................................................................................................................................2411.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTGCCTACTCTAATCCTTGGTC........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AACCTAATGACTGAAGAGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GAGGAGCGTCAAATGTTGGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...........GAGAACCTAATGACTGAAGAGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........................GAAGAGGAGCGTCAAATGTTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATGCATTTAGTCTGATTG...........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GAACCTAATGACTGAAGAGGAGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGTCTGATTGCCTACTCTAATCCT.............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTCTGATTGCCTACTCTAATCCT.............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
............................AGAGGAGCGTCAAATGTTGGATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCTGGAGAAGGAGAACCTAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................CCTAATGACTGAAGAGGAGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTAATCCTTGGTCCA......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGCTGGAGAAGGAGAACCTAATGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAAGGAGAACCTAATGACTGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGATTGCCTACTCTAATCCTT............................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAAGGAGAACCTAATGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................ACTGGTATCTTGCAGACTAAGCAC-----------------------------------------------TC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGGAGAACCTAATGACTGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................CAGACTAAGCAC-----------------------------------------------TCTTTGTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCTAATCCTTGGTCCAGTCCGC................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATGCATTTAGTCTGAT.............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AGGAGCGTCAAATGTTGGAGGATG--.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATTTAGTCTGATTGCCTACTCTAA.................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGAAGAGGAGCGTCAAATGTTGGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GAGAACCTAATGACTGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........AGGAGAACCTAATGACTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACTGAAGAGGAGCGTCAAATGTTGGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................AATGACTGAAGAGGAGCGTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GAGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------TTCAATTTA---------------------------T--GG-TTGTTACAG..............................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................CCTAATGACTGAAGAGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTACTCTAATCCTTGGTCCAGTCCGC................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCTGGAGAAGGAGAACCTAATGACTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCTGGAGAAGGAGAACCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
AGCTGGAGAAGGAGAACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
droEre2
AGCTGGAGAAGGAGAACCTAATGACTGAAGAGGAGCGTCAAATGTTGGAGGTAA--ACTATTAAGATTGATATCTTAAATATGCGGGTATATCACA---------C-----------------------------------------------GATTTGTACTTCAAAAATTACTTCAATAAGAATGT-----------------TATTATTAGGAACCTTGAATGATCTTTTATCTGAGGAATCCCTACTTT-------------------------A--------------GAGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------TTAAATCTA---------------------------T--AA-TTTTTACAGGATGCATTTAGTCTGATTGCCTACTCAAATCCTTGGTCCAGTCCGCTGGG--------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............GAACCTAATGACTGAAGAGGAGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000200
..............AACCTAATGACTGAAGAGGAGCGTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.................CTAATGACTGAAGAGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
...................AATGACTGAAGAGGAGCGTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
............................AGAGGAGCGTCAAATGTTGGAGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
..............AACCTAATGACTGAAGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
............AGAACCTAATGACTGAAGAGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
..............AACCTAATGACTGAAGAGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTACTCAAATCCTTGGTCCAGTCCGC................................................2911.0011000000
.............GAACCTAATGACTGAAGAGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
................CCTAATGACTGAAGAGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
droYak3
AGCTGGAGAAGGAAAACCTTATGACTGAAGAAGAGCGTCAAATGTTGGAGGTAA--ACTATTAATATTGATATCCTACCAAATCTGGTATTTTACAGGTTGAGGTGTGCCT--------------------------------CAAATAACAAAATTTGTATTTGGAAAATTACTTCAATATAAAATTTTTAGGAAATTGTTATTTATTGTTAGGATCTTTGAATGTTCTTTTATCTGAGTTATCCCTAATTG-------------------------A--------------GCGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------ACCAATCTA---------------------------T--AA-TTTTTACAGGATGCATTTAGTCTGATTGCGTACTCAAATCCTTGGTCCAGTCCGCTGGG--------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTGCGTACTCAAATCCTTGGTC........................................................2511.00110000000000
.........AGGAAAACCTTATGACTGAAGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000
............AAAACCTTATGACTGAAGAAGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCATTTAGTCTGATTGCGT........................................................................2211.00100000010000
.............AAACCTTATGACTGAAGAAGAGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.........AGGAAAACCTTATGACTGAAGAAGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
.............AAACCTTATGACTGAAGAAGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTCAAATCCTTGGTCCA......................................................2011.00101000000000
..........GGAAAACCTTATGACTGAAGAAGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTAGTCTGATTGCGTACTCAAA.................................................................2511.00101000000000
...............................................................................................................................................................................................................................ATGTTCTTTTATCTGAGTTATC....................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
droEug1
AGCTCGAGAAGGAGAACCTCATGACTGAAGAGGAGCGTCAAATGTTGGAGGTAT--ACTCTGAATATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAT------AAAAGATAAAAAGAT----------------------------------------------------------------------------------------------------------------TATT----------------------------------------------------------------------------------------------------------ATTTTAATTATACTTGCAGGATGCATTTAGCTTGATTGCTTACTCAAATCCCTGGTCCAGTCCGCTGGG--------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AGCTGGAGGAGGAGAACCGCATGACTGAAGAGGAGCGTCAAATGTTAGAGGTAC--AGTCTAGATAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGATTCCCAGCTGAGCTGGAGAT------ACTAATAAGTGAGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------CTCGATTTA---------------------------T--TGTTGCTTGCAGGATGCATTTAGCTTGATTGCCTACTCGAATCCCTGGTCCAGTCCGCTGGG--------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATTCA-------ATAATCTTATAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCCAGGATGCATTTAGTTTGATTGCCTACTCAAATCCCTGGTCCAGTCCGCTGGG--------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AGCTGGAGAAGGAGAACCTCATGACTGAAGAGGAGCGTCAAATGTTGGAGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AGCTGGAGAAGGAGAACCTCATGACTGAAGAGGAGCGTCAAATGTTGGAGGTAC--AG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTCAGCTAGTCCCTTCTGAATTCTTAGAATGATCGATATTTCACAAAATAAGCACTATTAGTSizeHit CountTotal NormTotal
No Reads
droFic1
AGCTGGAGAAGGAGAACCTCATGACTGAAGAGGAGCGTCAAATGTTGGAGGTAC--A-------------------------------------------------------------AATAAGATT---AAAATTAAAACGA---GTGTCAAA----------------------------------------------------------AGAAAC-----------------------------------TAG------AGTTGAGCTACAG-T------CCT---------AATATTTAATATATTTTTATTTACTTTTTATTTTAATATTTTATTTACTTAATAACTGTTTTTCAAAATTTGTATGATCTTTACGATCGAAATTCAATGTTATTCCACCATCTTA----A-TAAG-CTCATATCTTCAGTAGATTTTAAAAGAGATCTTTAAATTAAAT-G-----------------------------TA---------------------------C--TATTATTTTCAGGATGCATTTAGCTTGATTGCCTACTCAAATCCCTGGTCCAGTCCGCTGGG--------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AGCTGGAGAAGGAGAACCTCATGACTGAAGAAGAGCGTCAAATGTTGGAGGTAA--ACCAT----------------------------------------------GCAT--------------------------------AGATTATGCAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAACTTTGAAGTTT------------------------AATGTTGATTTTAAACTTAATTACAGGATGCATTTAGCTTGATTGCCTACTCAAATCCTTGGTCCAGTCCCTTGGG--------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
AGCTGGAGAAGGAAAACCTTATGACTGAAGAGGAGCGTCAAATGTTGGAGGTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATCCAC---------TAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------TCCTTG---------------ACTTTTGTGGAGATTGTAAACGTTTTTA---TTTATTGTAGGATGCATTTAGCTTGATCGCCTACTCTAATCCCTGGTCCAGTCCGCTTGG--------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTTAGCTTGATCGCCTAC......................................................................2112.002020000
...........GAAAACCTTATGACTGAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..............AACCTTATGACTGAAGAGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.........AGGAAAACCTTATGACTGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
......AGAAGGAAAACCTTATGACTGAAGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGATCGCCTACTCTAATCC..............................................................2311.001010000
droBip1
AGCTGGAGAAGGAGAACCTCATGACTGAAGAGGAGCGTCAAATGTTGGAGGTTT--G-------------------------------------------------TGCTT--------------------------------CAATTTCTTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATTTTGGAGTTTATAGCCCTTTGTA---TGTCTTGTAGGATGCATTTAGCTTGATTGCCTACTCAAACCCGTGGTCCAGTCCGCTTGG--------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
AGCTGGAAAAGGATAACCTCATGACCGAGGAGGAGCGTCAAATGTTGGAGGTAA--A-------------------------------------------------TGCCC--------------------------------CTATTATTAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCCTTCGCGCTTCCACTCTACACC------------AATTTCGATTTTA-----TTTCGCAGGATGCATTTAGCTTGATTGCCTACTCAAACCCCTGGTCCAGTCCGCTCGG--------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTTAGCTTGATTGCCTACT.....................................................................2211.0010100000000
.......................ACCGAGGAGGAGCGTCAAATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......AAAGGATAACCTCATGACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
AGCTGGAAAAGGATAACCTCATGACCGAGGAGGAGCGTCAAATGTTGGAGGTAA--A-------------------------------------------------TGCCC--------------------------------CTATTATTAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCCTTCGCGCTTCCACTCTACACC------------AATTTCGATTTTA-----TTTCGCAGGATGCATTTAGCTTGATTGCCTACTCAAACCCCTGGTCCAGTCCGCTCGG--------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............AACCTCATGACCGAGGAGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGATTGCCTACTCAAACCCCTGGTCC.......................................................2911.001100000
...................CATGACCGAGGAGGAGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
droWil2
AATTGGAAAAGGAGAATCTAATGACCGAGGAAGAGCGTCAAATGTTGGAGGTCA--G-------------------------------------------------------------TTTAAGTTT---GA---------GA---------------------------------------------------------------------------------------------------------------------------------GAAAC------ATAAGAAAATGAAAT----------------------------------------------------------------------------------------------------------------TCAT----------------------------------------------------------------------------------------------------------ATTTTATT-TTGCCCCCAGGATGCATTTAGTTTGATTGCGTATTCGAATCCTTGGTCCAGTCCCCTGGG--------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............AGAATCTAATGACCGAGGAAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.............GAATCTAATGACCGAGGAAGAGCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
.................CTAATGACCGAGGAAGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGAATCCTTGGTCCA......................................................1811.00100010
.............GAATCTAATGACCGAGGAAGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
droVir3
AGCTAGAGAAGGAGAACCTCATGACTGAAGAGGAGCGTCAAATGTTGGAGGTGC-------------------------------------------------------CTC--GCAATAACTA-TAAACTA---------AC--------------------------------------------------------------------------------------------------------------------------TAAATATGA---------------------GAT----------------------------------------------------------------------------------------------------------------TATTATTTAAA-------------------------------------------TTTATGTATATTATCCATG---------------------------------------------------AACAGGATGCATTTAGCTTGATTGCCTACTCAAATCCTTGGTCCAGCCCCTTGGG--------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
AGCTAGAGAAGGAGAACCTCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000000000000100001000000000000000000000000000000000000000000000
................CCTCATGACTGAAGAGGAGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGCATTTAGCTTGATT............................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...............ACCTCATGACTGAAGAGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
.....................TGACTGAAGAGGAGCGTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000001000000000000000000000000000000000000
.............GAACCTCATGACTGAAGAGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTGCCTACTCAAATCCTTGGTCCAGC....................................................2911.001000100000000000000000000000000000000000000000000000000000000000
...............ACCTCATGACTGAAGAGGAGCGTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTCAAATCCTTGGTCC.......................................................1911.001000000000000000000000000000000000001000000000000000000000000000
.....GAGAAGGAGAACCTCATGACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000010000000000000000000000000000000000000000000000000000000
............................AGAGGAGCGTCAAATGTTGGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCTTGATTGCCTACTCAAA.................................................................2111.001000000000000000000000000000000001000000000000000000000000000000
........................CTGAAGAGGAGCGTCAAATGTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
.......GAAGGAGAACCTCATGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000010000000000000000000000000
droMoj3
AGCTAGAGAAGGAGAACCTCATGACTGAAGAGGAGCGTCAAATGTTGGAGGTGATAG-------------------------------------------------AG-------CAATTTCAT-TA---TA---------GC--------------------------------------------------------------------------------------------------------------------------CAAGCATGAAATG-----ACTTAAAATTTGAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------------------CT----------------------------CGAATCT--------ATTTAGGATGCATTTAGCCTGATTGCCTACTCAAATCCTTGGTCCAGTCCCTTGGG--------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCATTTAGCCTGATTGC..........................................................................2012.002200000
......AGAAGGAGAACCTCATGACTGAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
....AGAGAAGGAGAACCTCATGACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..............................................GGAGGTGATAG-------------------------------------------------AG-------CAATTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
............................AGAGGAGCGTCAAATGTTGGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
..............AACCTCATGACTGAAGAGGAGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
droGri2
AGCTGGAGAAGGAGAACCTCATGACTGAAGAGGAGCGTCAAATGTTGGAGGTGC-------------------------------------------------------CTTAAGGAATAAC-----------------------------------------------------------------------------------------------------------------------------------TAAACTCTCAAAA----TGT--AT------ACAACTAAATTGCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAT-----------------------------------------------GTTTATTA-----TATTTGGCAGGATGCATTTAGCTTGATTGCCTACTCAAATCCTTGGTCCAGTCCTTTGGG--------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCAAATCCTTGGTCCAGTC...................................................2111.00110
..................TCATGACTGAAGAGGAGCGTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101
...................CATGACTGAAGAGGAGCGTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101
.GCTGGAGAAGGAGAACCTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
....................ATGACTGAAGAGGAGCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101

Generated: 05/19/2015 at 12:24 PM