dsi_3793

CDS [2r_7978265_7978376_-]; exon [2r_7977931_7978376_-]; intron [2r_7978377_7979148_-]

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## CACGCCATCAGCCACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGTCTATCCACTCCAGCGCTATCCCTCGCCATACCCATACCCATATCCATATCCGCAGCCATACCCCTATCCGTATCCGTTGTCGCACCAATTGTATCTGTGAGATCGCGAGACTACACCGTTCGCCTGTTCCACCTTCTAATTGCAGCTCGGATGTGGACGAGTGGCCATGTCGCGATGGTGGCGCCGGCGCCCTGC *********************************************************************************************************************........(((((.(((.(((...........))).))).))).)).**********************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M025 embryo	M023 head	SRR618934 dsim w501 ovaries	M053 female body	M024 male body	SRR553486 Makindu_3 day-old ovaries	SRR553485 Chicharo_3 day-old ovaries	SRR553488 RT_0-2 hours eggs	GSM343915 embryo
...................................................................................................................................................................................................ATCAACTCGGATGTGGACGAGTGGCC.............................	26	3	1	2.00	2	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................GGCCATGTCGCGATGGTG...............	18	0	1	2.00	2	1	1	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................GAGTGGCCATGTCGCGATG..................	19	0	1	1.00	1	0	0	0	1	0	0	0	0	0
........................................................................................................................ATCCGTATCCGGTGTCGCACCA............................................................................................................	22	1	1	1.00	1	0	1	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TCGGATGTGGACGAGTGGCC.............................	20	0	1	1.00	1	0	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................GCTCGGATGTGGACGAGTG................................	19	0	1	1.00	1	0	0	1	0	0	0	0	0	0
................................................................................................................................................................................................AATTGCAGCTCGGATGTGGAC.....................................	21	0	1	1.00	1	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................ACCTTCTAATTGCAGCTCGGATGTGGA......................................	27	0	1	1.00	1	0	0	0	0	0	1	0	0	0
...............................................................................................................................................................................................TAATTGCAGCTCGGATGTGGACGAGT.................................	26	0	1	1.00	1	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................CTCGGATGTGGACGAGTGGCCA............................	22	0	1	1.00	1	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................................................CAACTCGGATGTGGACGAGTGGCC.............................	24	1	1	1.00	1	0	1	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TCGGATGCTGACGAGTGGC..............................	19	2	1	1.00	1	0	0	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................ATGTCGCGATGGTGGCGCC..........	19	0	1	1.00	1	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................TATGTCGCGATGTTGGCGCC..........	20	2	1	1.00	1	0	0	0	1	0	0	0	0	0
...................................................................................................................................................................................................................ACGAGTGGCCATGTCGCGATGGTG...............	24	0	1	1.00	1	0	0	0	1	0	0	0	0	0
...................................................................................................................................................ATCTGTGAGATCGCGAGAC....................................................................................	19	0	1	1.00	1	0	0	0	0	1	0	0	0	0
.......................................................................................................................TATCCGTATCCGTTGTCGCACCA............................................................................................................	23	0	1	1.00	1	0	0	1	0	0	0	0	0	0
...................................................................................................................................................................................................ATCAACTCGGATGTGGACGAGT.................................	22	3	4	0.50	2	1	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................................................GTCGTGATGGCGGCGCCGGCG......	21	2	2	0.50	1	0	0	0	0	0	0	1	0	0
..........................................................................................................................................................................................................CGGATGCTGACGAGTGGC..............................	18	2	3	0.33	1	0	0	0	0	0	1	0	0	0
.........................................................................................................................................................................................................TCGGATGCTGACGAGTGGCGA............................	21	3	3	0.33	1	0	0	0	0	0	1	0	0	0
.........................................................................................................................................................................................................TCGGATGCTGACGAGTGG...............................	18	2	5	0.20	1	0	0	0	0	0	0	0	1	0
..........................................................................................AGCCGTACCCATATCCGCAG............................................................................................................................................	20	3	7	0.14	1	0	0	0	0	0	1	0	0	0
...............................................................................GCCACACCCGTACCCATA.........................................................................................................................................................	18	2	19	0.05	1	0	0	0	0	0	1	0	0	0
...............................................................................................................................................................................CGCCGGTTCAAACTTCTA.........................................................	18	3	20	0.05	1	0	0	0	0	0	0	0	0	1
.......................................................................................................................................................................AATCCCTTCGCCTGTTCCA................................................................	19	3	20	0.05	1	0	0	0	0	0	0	0	1	0

GTGCGGTAGTCGGTGACATGATACACGGGGTACCCCTCGGTGTTCTAGTACAACAGATAGGTGAGGTCGCGATAGGGAGCGGTATGGGTATGGGTATAGGTATAGGCGTCGGTATGGGGATAGGCATAGGCAACAGCGTGGTTAACATAGACACTCTAGCGCTCTGATGTGGCAAGCGGACAAGGTGGAAGATTAACGTCGAGCCTACACCTGCTCACCGGTACAGCGCTACCACCGCGGCCGCGGGACG **********************************************************************************........(((((.(((.(((...........))).))).))).)).*********************************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553485 Chicharo_3 day-old ovaries	SRR618934 dsim w501 ovaries	M023 head	M024 male body	SRR553486 Makindu_3 day-old ovaries	SRR553487 NRT_0-2 hours eggs
....................................................................................TGGGTATGGGTACAGGTA....................................................................................................................................................	18	1	20	0.10	2	0	0	1	1	0	0
....GGTAGTCTGTGACAAGA.....................................................................................................................................................................................................................................	17	2	13	0.08	1	1	0	0	0	0	0
............................................................................................................................................................................CCAGCGGACAAGTTGGA.............................................................	17	2	19	0.05	1	0	1	0	0	0	0
......................................................................GATATGAAGCGGTATG....................................................................................................................................................................	16	2	20	0.05	1	0	0	0	0	1	0
.......................................................................................................................................................................................................CGAGCCTGCACCCGCT...................................	16	2	20	0.05	1	0	0	0	0	0	1

Species	Coordinate	ID	Alignment
droSim2	2r:7978327-7978576 -	dsi_3793	CACG--------C-C---ATCAGC---CACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGTCTATCCA------CTCCAGCGCTATCCCT---------CGCCATA---C------CCATACCC------ATA------TCCATATCCGCAGCCATA------CC---CCTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCGCACCAAT---TGTAT-----------CTGTGAGAT-CG---------CGAG---------------A---------CTACACC-------------------------------------GTTCG-----------CCTG-TTCCACCTTCTAATTGCAGCTCGG---ATGTGGACGAGTGGCCATGTCGCGATGGTGGCGCCGGCGCCCTGC
droSec2	scaffold_1:4825020-4825269 -		CACG--------C-C---CTCAGC---CACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGCCTATCCA------CTCCAGCGCTATCCCT---------TGCCATA---C------CCATACCC------ATA------TCCATATCCGCAGCCATA------CC---CCTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCGCACCAAT---TGTAT-----------CTGTGAGAT-CG---------CGAG---------------A---------CTACACC-------------------------------------GTTCG-----------CCTG-TTCCACCTTCTAATTGCAGCTCGG---ATGTGGACGAGTGGCCATGTCGCGATGGCGGCGCCGGCGCCCTGC
dm3	chr2R:7268249-7268498 -		CACG--------C-C---ATCAGC---CACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGTCTATCCA------CTCCAGCACTATCCTT---------TGCCATA---C------CCACACCC------ATA------TCCATATCCGCACCCATA------CC---CCTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCGCACCAAT---TGTAT-----------CTGTGAGAT-CG---------CGAG---------------A---------CTACACC-------------------------------------GTTCG-----------CCTG-TTCCACCTTCTAATTGCAGCTCGG---ATGTGGACGAGTGGCCATGTCGCGATGGTGGCGCCGGCGCCCTGC
droEre2	scaffold_4845:18526200-18526449 +		CACG--------C-C---ATCAAC---CACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGTCTATCCA------CTCCAGCGCTATCCCT---------TGCCATA---C------CCATACCC------ATA------TCCATATCCGCACCCATA------CC---CCTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCGCACCAAT---TGTAT-----------CTGTGAGAT-CG---------CGAG---------------A---------CTACACC-------------------------------------GTTCG-----------CCTG-TTCCACCTTCTAATTGCAGCTCGG---ATGTGGACGAGTGGCCATGTCGCGATGGTGGCGCCGGCGCCCTGC
droYak3	2R:9691587-9691848 +		CACG--------C-C---ATCAAC---CACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGTCTATCCA------CTACAGCGCTATCCCC---------TGCCATA---C------CCAT------------A------TCCATATCCGCACCCATA------CC---CCTATCCGTATCCGTATCCGCATCC--------------------------------------------------------------------------GTATCCGTTGTCGCACCAAT---TGTAT-----------CTGTGAGAT-CG---------CGAG---------------A---------CTACACC-------------------------------------GTTCG-----------CCTG-TTCCACCTTCTAATTGCAGCTCGG---ATGTGGACGAGTGGCCATGTCGCGATGGTGGCGCCGGCGCCCTGC
droEug1	scf7180000409462:1238365-1238610 +		CACG--------C-C---CTCAAC---CACTGTACTATGTGCCCCATGAGGAGCCACAAGATCATGTTGTCTATCCA------CTACAGCGCTATCCC---------------TATCC---------ATATCC------ATA------TCCATATCCCCATCCATA------CC---CCTATCCGTA--------------------------------------------------------------------------------------------CCCGTTTTCGCACCAAT---TGTAT-----------CTGTAAGAA-CG---------CGAG---------------A---------CTAC----------------T-------------------ACCTGTTCG-----------CCCGTTTCCACC-TTTAATTGCAGCTCGG---ATGTGGACGAGTGGCCATGTCGCGATGGTGGCGCCGGCGCCCTAC
droBia1	scf7180000301754:1021042-1021294 +		CACG--------C-C---ATCAAC---CACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGTCTATCCA------CTCCAGCGCTATCCCGCGTACCCACTGCCATA---CCCACACCCATACCC------ATA------TCCATATCCGCATCCGTA------CC---CCTATCCTTA--------------------------------------------------------------------------------------------TCCGTTTTCGCACCAAT---TGTAT-----------CTGTGAGAT-CG---------CGAG---------------A---------CTAC------------------------------------ACCTGTG------------------------C-TCTAATTGCAGCTCGG---ACGTGGACGAGTGGCCATGTCGCGATGGTGGCGCCGGCGCCCTGC
droTak1	scf7180000414560:288940-289184 +		CACG--------C-C---ATCAAC---CACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGTCTATCCA------CTCCAGCGTTATCCA---------------TACCC---ACACCCATATCC------ATA------CCCATATCCGCAC---TA------TC---CCTATCCGTA--------------------------------------------------------------------------------------------TCCGTTTTCGCACCAAT---TGTAT-----------CTGTGAGAT-GG---------CGAG---------------A---------CTAT-CC-------------------------------------GTTAC-----------TACG-TTCCACC-TTTAATTGCAGCTCGG---ATTTGGACGAGTGGCCATGTCGCGATGGTGGCGCCGGCGCCCTGC
droEle1	scf7180000491214:2715312-2715598 -		CACC--AAAACGT-C---ATCAGC---CACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGTCTATCCA------CTACAGCGCTATCCCTCGTACCCACTGCCATA---CCTACACCCATACCC------ATATCCGCACCCATATCCGCACCCATA------TC---CCTATCCGTA--------------------------------------------------------------------------------------------TCCGTTTTCGCACCAATCTGTGTAC-----------CTGTGAGAT-CG---------CGAG---------------A---------GTACT----------ACTACT-------------------ACCTGTTCG-----------CCTG-TTCCACC-TCTAATTGCAGCTCGG---ATGTGGACGAATGGCCATGTCGCGATGGTGGCGCCGGCGCCCTCC
droRho1	scf7180000779263:292351-292616 +		AACG--------T-C---ATCAAC---CACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGTCTATCCACTGCCACTACAGCGCTATCCTTCGTATCCACTGCCATA---C------CCATACC------------------CATATCCGCACCCATA------TC---CCTATCCGTA--------------------------------------------------------------------------------------------TCCGTTTTCGCACCAAT---TGTAT-----------CTGTGAGAT-CG---------CGAA--------TCGCGAAA---------CTAC------------------------------------ACCTGTTCG-----------CCTG-TTCCACC-TTTAATTGCAGCTCGG---ACGTGGACGAATGGCCATGTCGCGATGGTGGCGCCGGCGCCCTCC
droFic1	scf7180000453773:202370-202640 -		CACG--------T-C---ACCAAC---CACTGTACTATGTGCCCCATGAGGAGCCACAAGATCATGTTGTCTATCCA------CTCCAGCGCTATCCA---------------TACCC---------ATATC------------------CATATCCGCACCCATATCCATACTCCTCCTATCCGTATCCGTATCCGTATCCGTTTT--------------------------------------------------------------------CGTATCCGCTTGCGCACCAAT---TGCAT-----------CTGTGAGAT-CG---------CGAG---------------A---------CTAC------------------------------------ACCTGTTCG-----------CCTG-TTCCGCC-TCTAATTGCAGCTCGG---ATGTGGACGAATGGCCATGTCGCGACGGTGGCGCCGGCGCCCTCC
droKik1	scf7180000302476:100943-101209 -		CAC-----------C---ATCAAGCACCACTGTTTTATGTGCCCCATGAGGAGCCACAAGATCATGTTGTCTATCCA------CTCCAGCGCTATCCACCGTATCC---------------------ACTTGC------ATA------CCCATATCCGCACCCATATCCATACC---CCTATCCGTA--------------------------------------------------------------------------------------------TTCGTATCCG------C---TGTAT-----------CTGTGAGAAATGAGAGAGAAGAGAG---------------A---------GTTCA-------------------------------ACACACCTGTTCG-----------TCTGGTTCCACC-TCTAATTGCAGCTCGGAGGATCTGGAGGAATGGCCTTGCCGCGATGGTGGCGCCGGCGCCCTGC
droAna3	scaffold_13266:970660-970903 -	dan_1703	CAC-----------CATCATCAAC---CACTGTACTATGTGCCCCATAGGGAGCCACAAGATCACGTTGTCTATCCC------TTACAGCGGTATCCACCCTATCCGCTGCCATA---C------CCATACCC------AT---------------CATACCCATA------CC---CGTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCACACCAAT---TGTAC-----------CTATAAGAT-GA---------TG------------------------------------------------TAGCTGAAGACTAGAA-------------------------------ATAC-TTTAATTGCAGCTCGG---ACGTCGACGAGTGGCCATGCCGGACAGGTGGCGCCGGTGTCCTGC
droBip1	scf7180000396730:1975620-1975883 -		CACGCCAAAACCACCATCATCAAC---CACTGTACTATGTGCCCCACAGGGAGCCACAAGATCACGTTGTCTATCCC------CTACAGCGGTATCCGCACTACCCGCTGCCATA---C------CCATATCC------ATA------CCCATATCCGTACCCCCA------TC---TGTACCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCGCACCAAT---TGTAT-----------CTATAAGAT-GG---------TG------------------------------------------------TAGCTGAAGCCTAGAA-------------------------------ATAC-TTTAATTGCAGCTCGG---ATGTCGACGAGTGGCCATGTCGGACAGGTGGCGCCGGTGTCCTGC
dp5	3:13508259-13508491 +		TCCA--------T-C---ATCAGCCCCCACTGTACTATGTGCCCCATGAGGAGCCACAAGATCATGTTGTCTATCCA------CTCCAGCGCTATCCCTCG------------TA---C------CCATACCC------ATA------CCCGTATCCGCACCCG---------------------------------------TTCTATCTGTGAA--TC-----C-GCTCCC-----------------------------------------------------------------------------------------------------------------------------------CACC------------------TAGCTGAAGATTAGAATACATCTGTGCA-----------C-------CCAC-TCTACTTACAGCTCGG---ATGTGGACGAGTGGCCCTGCCGCGATGGTGGCGTCGGAGGCCTGC
droPer2	scaffold_2:8111775-8112006 -		TCCA--------T-C---ATCAGCCCCCACTGTACTATGTGCCCCATGAGGAGCCACAAGATCATGTTGTCTATCCA------CTCCAGCGCTATCCCTCG------------TA---C------CCATACCC------ATA------TCCGTATCCGCACCCG---------------------------------------TTCTATCTGTGAA--TC-----C-GCTCCC------------------------------------------------------------------------------------------------------------------------------------CCC------------------TAGCTGAAGATTAGAATACATCTGTGCA-----------C-------CCAC-TCTACTTACAGCTCGG---ATGTGGACGAGTGGCCCTGCCGCGATGGTGGCGTCGGAGGCCTGC
droWil2	scf2_1100000004513:4668846-4669117 +		CACG--AAAACCA-C---ATCAGTCTTCCATCTTCTATGTGCCTCATG---AGCCTAATCATCAAGTTATCTATCCA------CTTCTACGTTATCCA---------------TATCC---------ATATGC---TTCGTA------TC------CGTTC---T------------------------------------------ATTTGTGAT---T-----C-GTTTCC------------TATACATACAAACATACTTCTATATATATATATATATACTTTAACATAGTT---TTAAT-----------CAATG------G---------TA--ATATCGAATCCGTAAA---------CTA------------------------------------------------------------------AAC-TCTATTTTTAGCTCGG---ATATTGATGAATGGCCCTGTAGAGAAGGTGGAGCTGGTGCTTTGA
droVir3	scaffold_12875:13236517-13236750 +		------------------ATCAGC---CCACATTTTACGTGCCGCACGATCAGCCTCACGATCATGTTATATATCCA------CTTCTGCGACATCCC---------------TATCC---------ATACGC------ATA------TC------CGTAC---T------------------------------------------ATCTGTGAA--TTGTGTTT-GTGTTC------------AGTCCAGTCCCGCACCCCTCTCC-------------------------------------------------ATTGGCC-GA---------TA------------------------------------------------C------------------ACTCGTGT--------CCTAACCA-C-ATAAC-TCTACTTATAGGTCGG---ATGTGGACGAATGGCCCTGCCGCGACAACGGTGCCGGAACACTGG
droMoj3	scaffold_6496:20525552-20525818 +		CACACTGC----A-A---ATCAGC---CCACATTTTATGTGCCGCACGATCAGCCTCACGATCATGTTATCTACCCA------CTACTGCGCCATCCT---------------TATCC---------ATACGC------ATA------TC------CGTAC---T------------------------------------------ATCTATAAGGGTTCCATTCAATGTTCAATGTTCTATGTACTGCAGCCCCGC-CCACTTTCCAC--A------CTCGT---C----------------------------------------------------------------------------CAGC------------------TAGCTG--------------------CACTCCTATCCTAATAC-CATTAAC-TCTACTTGTAGGTCGG---ATGTGGACGAATGGCCCTGCCGCGGCGGCGGTGCGGATGCACTGC
droGri2	scaffold_8526:2531-2789 +		------------------ATCAGC---CCACATTTTATGTGCCGCACGATCAGCCTCACGATCATGTTGTATATCCA------CTACTGCGTCATCCA---------------TATCC---------AT---CATATCCATA------TC------CGTAT---T------------------------------------------ATCTATAAA--GTGTG------------------------------------------------------------------------------TGTTTGTTTGTTGTCTCTT------G---------TG--TTATCGTACCCATGAACCCCTCCAAATACAGCATTTGGCCCGAACT-------------------TTTTGGCTA-----------ACTG-TAATAAC-TTTACTTATAGGTCGG---ATGTGGATGATTGGCCCTGTCTGCGGGACGGTGCCGGAACCCTGC

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

CACG--------C-C---ATCAGC---CACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGTCTATCCA------CTCCAGCGCTATCCCT---------CGCCATA---C------CCATACCC------ATA------TCCATATCCGCAGCCATA------CC---CCTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCGCACCAAT---TGTAT-----------CTGTGAGAT-CG---------CGAG---------------A---------CTACACC-------------------------------------GTTCG-----------CCTG-TTCCACCTTCTAATTGCAGCTCGG---ATGTGGACGAGTGGCCATGTCGCGATGGTGGCGCCGGCGCCCTGC	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCATGTCGCGATGGTG...............	18	1	2.00	2	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGGCCATGTCGCGATG..................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGG---ATGTGGACGAGTGGCC.............................	20	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCGG---ATGTGGACGAGTG................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCAGCTCGG---ATGTGGAC.....................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTTCTAATTGCAGCTCGG---ATGTGGA......................................	27	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGCAGCTCGG---ATGTGGACGAGT.................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGG---ATGTGGACGAGTGGCCA............................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGCGATGGTGGCGCC..........	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGTGGCCATGTCGCGATGGTG...............	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................AT-----------CTGTGAGAT-CG---------CGAG---------------A---------C........................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................TATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCGCACCA................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0

droSec2

CACG--------C-C---CTCAGC---CACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGCCTATCCA------CTCCAGCGCTATCCCT---------TGCCATA---C------CCATACCC------ATA------TCCATATCCGCAGCCATA------CC---CCTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCGCACCAAT---TGTAT-----------CTGTGAGAT-CG---------CGAG---------------A---------CTACACC-------------------------------------GTTCG-----------CCTG-TTCCACCTTCTAATTGCAGCTCGG---ATGTGGACGAGTGGCCATGTCGCGATGGCGGCGCCGGCGCCCTGC	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGG---ATGTGGACGAGTGGCCATGT.........................	25	1	1.00	1	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGTGGCCATGTCGCGATGGC................	23	1	1.00	1	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACGAGTGGCCATGTCGCGATGGCGGC.............	28	1	1.00	1	0	0	1	0

dm3

CACG--------C-C---ATCAGC---CACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGTCTATCCA------CTCCAGCACTATCCTT---------TGCCATA---C------CCACACCC------ATA------TCCATATCCGCACCCATA------CC---CCTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCGCACCAAT---TGTAT-----------CTGTGAGAT-CG---------CGAG---------------A---------CTACACC-------------------------------------GTTCG-----------CCTG-TTCCACCTTCTAATTGCAGCTCGG---ATGTGGACGAGTGGCCATGTCGCGATGGTGGCGCCGGCGCCCTGC	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG---ATGTGGACGAGTGGCCATGTCGCGAT...................	28	1	12.00	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCGCGATGGTGGCGCC..........	20	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGG---ATGTGGACGAGTGGCC.............................	20	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGCGATGGTGGCGCC..........	19	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCTCGG---ATGTGGACGAGTGGC..............................	25	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCTCGG---ATGTGGACGAGTG................................	23	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGACGAGTGGCCATGTCGC......................	22	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAATTGCAGCTCGG---ATGTGGAC.....................................	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
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..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGACGAGTGGCCATGTCGCGA....................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.......................................................................................................................................................................................CGTA--------------------------------------------------------------------------------------------TCCGTTGTCGCACCA................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TACTATGTGCCCCATGGGGAGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................G-----------CCTG-TTCCACCTTCTAATTGC.......................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG---ATGTGGACGAGTGGCCATGTCGC......................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGG---ATGTGGACGAGTGGCTCC...........................	22	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

CACG--------C-C---ATCAAC---CACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGTCTATCCA------CTCCAGCGCTATCCCT---------TGCCATA---C------CCATACCC------ATA------TCCATATCCGCACCCATA------CC---CCTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCGCACCAAT---TGTAT-----------CTGTGAGAT-CG---------CGAG---------------A---------CTACACC-------------------------------------GTTCG-----------CCTG-TTCCACCTTCTAATTGCAGCTCGG---ATGTGGACGAGTGGCCATGTCGCGATGGTGGCGCCGGCGCCCTGC	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
......................................................................................................................................................................................................................................................................................................AT---TGTAT-----------CTGTGAGAT-CG---------CGAG---------------A---------.........................................................................................................................................	23	1	4.00	4	0	0	0	0	0	0	4
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---ATGTGGACGAGTGGCCATGT.........................	21	1	1.00	1	0	0	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGG---ATGTGGACGAGTGGC..............................	20	1	1.00	1	0	1	0	0	0	0	0

droYak3

CACG--------C-C---ATCAAC---CACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGTCTATCCA------CTACAGCGCTATCCCC---------TGCCATA---C------CCAT------------A------TCCATATCCGCACCCATA------CC---CCTATCCGTATCCGTATCCGCATCC--------------------------------------------------------------------------GTATCCGTTGTCGCACCAAT---TGTAT-----------CTGTGAGAT-CG---------CGAG---------------A---------CTACACC-------------------------------------GTTCG-----------CCTG-TTCCACCTTCTAATTGCAGCTCGG---ATGTGGACGAGTGGCCATGTCGCGATGGTGGCGCCGGCGCCCTGC	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTGGCCATGTCGCGATGGTGGCGCC..........	28	1	18.00	18	0	0	0	0	0	0	0	0	0	0	18
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCGCGATGGTGGCGCCGGC.......	23	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGTGGCCATGTCGCGATGGT................	24	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCATGTCGCGATGGTGGCGCCGGC.......	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................CG---------CGAG---------------A---------CTACACC-------------------------------------GTTCG-----------.............................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGG---ATGTGGACGAGTGGCCATGT.........................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCGCGATGGTGGCGC...........	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCGCGATGGTGGCGCCGGT.......	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................................CATGGGGAGCCACAAGATCATGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGGCCATGTCGCGATGGT................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTGGCCATGTCGCGATGGTGGCGCA..........	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGCGATGGTGGCGCCGGC.......	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...............................GTACTATGTGCCCCATGGGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGCCATGTCGCGATGGTGGCGCC..........	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGTGGCCATGTCGCGATGGTGGCGCC..........	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

CACG--------C-C---CTCAAC---CACTGTACTATGTGCCCCATGAGGAGCCACAAGATCATGTTGTCTATCCA------CTACAGCGCTATCCC---------------TATCC---------ATATCC------ATA------TCCATATCCCCATCCATA------CC---CCTATCCGTA--------------------------------------------------------------------------------------------CCCGTTTTCGCACCAAT---TGTAT-----------CTGTAAGAA-CG---------CGAG---------------A---------CTAC----------------T-------------------ACCTGTTCG-----------CCCGTTTCCACC-TTTAATTGCAGCTCGG---ATGTGGACGAGTGGCCATGTCGCGATGGTGGCGCCGGCGCCCTAC	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CACG--------C-C---ATCAAC---CACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGTCTATCCA------CTCCAGCGCTATCCCGCGTACCCACTGCCATA---CCCACACCCATACCC------ATA------TCCATATCCGCATCCGTA------CC---CCTATCCTTA--------------------------------------------------------------------------------------------TCCGTTTTCGCACCAAT---TGTAT-----------CTGTGAGAT-CG---------CGAG---------------A---------CTAC------------------------------------ACCTGTG------------------------C-TCTAATTGCAGCTCGG---ACGTGGACGAGTGGCCATGTCGCGATGGTGGCGCCGGCGCCCTGC	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CACG--------C-C---ATCAAC---CACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGTCTATCCA------CTCCAGCGTTATCCA---------------TACCC---ACACCCATATCC------ATA------CCCATATCCGCAC---TA------TC---CCTATCCGTA--------------------------------------------------------------------------------------------TCCGTTTTCGCACCAAT---TGTAT-----------CTGTGAGAT-GG---------CGAG---------------A---------CTAT-CC-------------------------------------GTTAC-----------TACG-TTCCACC-TTTAATTGCAGCTCGG---ATTTGGACGAGTGGCCATGTCGCGATGGTGGCGCCGGCGCCCTGC	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CACC--AAAACGT-C---ATCAGC---CACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGTCTATCCA------CTACAGCGCTATCCCTCGTACCCACTGCCATA---CCTACACCCATACCC------ATATCCGCACCCATATCCGCACCCATA------TC---CCTATCCGTA--------------------------------------------------------------------------------------------TCCGTTTTCGCACCAATCTGTGTAC-----------CTGTGAGAT-CG---------CGAG---------------A---------GTACT----------ACTACT-------------------ACCTGTTCG-----------CCTG-TTCCACC-TCTAATTGCAGCTCGG---ATGTGGACGAATGGCCATGTCGCGATGGTGGCGCCGGCGCCCTCC	Size	Hit Count	Total Norm	Total
No Reads

droRho1

AACG--------T-C---ATCAAC---CACTGTACTATGTGCCCCATGGGGAGCCACAAGATCATGTTGTCTATCCACTGCCACTACAGCGCTATCCTTCGTATCCACTGCCATA---C------CCATACC------------------CATATCCGCACCCATA------TC---CCTATCCGTA--------------------------------------------------------------------------------------------TCCGTTTTCGCACCAAT---TGTAT-----------CTGTGAGAT-CG---------CGAA--------TCGCGAAA---------CTAC------------------------------------ACCTGTTCG-----------CCTG-TTCCACC-TTTAATTGCAGCTCGG---ACGTGGACGAATGGCCATGTCGCGATGGTGGCGCCGGCGCCCTCC	Size	Hit Count	Total Norm	Total
No Reads

droFic1

CACG--------T-C---ACCAAC---CACTGTACTATGTGCCCCATGAGGAGCCACAAGATCATGTTGTCTATCCA------CTCCAGCGCTATCCA---------------TACCC---------ATATC------------------CATATCCGCACCCATATCCATACTCCTCCTATCCGTATCCGTATCCGTATCCGTTTT--------------------------------------------------------------------CGTATCCGCTTGCGCACCAAT---TGCAT-----------CTGTGAGAT-CG---------CGAG---------------A---------CTAC------------------------------------ACCTGTTCG-----------CCTG-TTCCGCC-TCTAATTGCAGCTCGG---ATGTGGACGAATGGCCATGTCGCGACGGTGGCGCCGGCGCCCTCC	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CAC-----------C---ATCAAGCACCACTGTTTTATGTGCCCCATGAGGAGCCACAAGATCATGTTGTCTATCCA------CTCCAGCGCTATCCACCGTATCC---------------------ACTTGC------ATA------CCCATATCCGCACCCATATCCATACC---CCTATCCGTA--------------------------------------------------------------------------------------------TTCGTATCCG------C---TGTAT-----------CTGTGAGAAATGAGAGAGAAGAGAG---------------A---------GTTCA-------------------------------ACACACCTGTTCG-----------TCTGGTTCCACC-TCTAATTGCAGCTCGGAGGATCTGGAGGAATGGCCTTGCCGCGATGGTGGCGCCGGCGCCCTGC	Size	Hit Count	Total Norm	Total
No Reads

droAna3

CAC-----------CATCATCAAC---CACTGTACTATGTGCCCCATAGGGAGCCACAAGATCACGTTGTCTATCCC------TTACAGCGGTATCCACCCTATCCGCTGCCATA---C------CCATACCC------AT---------------CATACCCATA------CC---CGTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCACACCAAT---TGTAC-----------CTATAAGAT-GA---------TG------------------------------------------------TAGCTGAAGACTAGAA-------------------------------ATAC-TTTAATTGCAGCTCGG---ACGTCGACGAGTGGCCATGCCGGACAGGTGGCGCCGGTGTCCTGC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.............................................................................................................................................................................................................................................................................................................................................................................................................TAGAA-------------------------------ATAC-TTTAATTGCAGCTCGG---A............................................	26	1	14.00	14	10	3	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC-TTTAATTGCAGCTCGG---ACGTCGA......................................	26	1	13.00	13	13	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGAGTGGCCATGCCGGACA...................	23	1	12.00	12	3	9	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................TAGAA-------------------------------ATAC-TTTAATTGCAGCTCGG---ACG..........................................	28	1	12.00	12	10	2	0	0	0	0
..............................................................................................TCCACCCTATCCGCTGCCATA---C------CCA......................................................................................................................................................................................................................................................................................................................................................................................	25	1	11.00	11	4	7	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................TAGAA-------------------------------ATAC-TTTAATTGCAGCTCGG---AC...........................................	27	1	11.00	11	9	2	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGAGTGGCCATGCCGGACAGG.................	25	1	11.00	11	10	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC-TTTAATTGCAGCTCGG---ACGTCGAC.....................................	27	1	10.00	10	8	2	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGAGTGGCCATGCCGGACA...................	24	1	9.00	9	3	6	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGCAGCTCGG---ACGTCGACGAG..................................	25	1	8.00	8	8	0	0	0	0	0
...................................................................................................................................................................................TATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCACACCAAT---TG.........................................................................................................................................................................................................	27	1	8.00	8	7	1	0	0	0	0
............................................................................................TATCCACCCTATCCGCTGCCATA---C------C........................................................................................................................................................................................................................................................................................................................................................................................	25	1	7.00	7	2	5	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................TAGAA-------------------------------ATAC-TTTAATTGCAGCTCGG---.............................................	25	1	7.00	7	7	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGAGTGGCCATGCCGGACAGGTG...............	27	1	7.00	7	6	0	0	0	1	0
............................................................................................................................................T---------------CATACCCATA------CC---CGTATCCGTA--------------------------------------------------------------------------------------------TCC............................................................................................................................................................................................................................	26	1	6.00	6	0	6	0	0	0	0
.AC-----------CATCATCAAC---CACTGTACTATGTGCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	29	1	6.00	6	5	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC-TTTAATTGCAGCTCGG---ACGTCG.......................................	25	1	6.00	6	6	0	0	0	0	0
..............................................................................................TCCACCCTATCCGCTGCCATA---C------CC.......................................................................................................................................................................................................................................................................................................................................................................................	24	1	6.00	6	2	4	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGTGGCCATGCCGGACAGGTGG..............	26	1	6.00	6	3	2	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................GACTAGAA-------------------------------ATAC-TTTAATTGCAGCTCG.................................................	27	1	6.00	6	5	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCATGCCGGACAGGTGG..............	20	1	6.00	6	0	4	2	0	0	0
.................................................................................................................TA---C------CCATACCC------AT---------------CATACCCATA------CC---CG...................................................................................................................................................................................................................................................................................................................................	27	1	6.00	6	4	2	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGAGTGGCCATGCCGGAC....................	23	1	5.00	5	3	2	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGTGGCCATGCCGGACAGGT................	24	1	5.00	5	1	3	1	0	0	0
..............................................................................................TCCACCCTATCCGCTGCCATA---C------CCATA....................................................................................................................................................................................................................................................................................................................................................................................	27	1	5.00	5	4	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---ACGTCGACGAGTGGCCATGCCGG......................	24	1	5.00	5	4	1	0	0	0	0
.....................................................................TCTATCCC------TTACAGCGGTATCCACCC.................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	5.00	5	0	5	0	0	0	0
..............................................................................................TCCACCCTATCCGCTGCCATA---C------CCATACC..................................................................................................................................................................................................................................................................................................................................................................................	29	1	4.00	4	3	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGTGGCCATGCCGGACAGGTG...............	25	1	4.00	4	3	1	0	0	0	0
...........................CACTGTACTATGTGCCCCATAGGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	4.00	4	1	3	0	0	0	0
..............................................................................................TCCACCCTATCCGCTGCCATA---C------CCATAC...................................................................................................................................................................................................................................................................................................................................................................................	28	1	4.00	4	1	3	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGCAGCTCGG---ACGTCGACGA...................................	24	1	4.00	4	3	1	0	0	0	0
............................................................................................................................................T---------------CATACCCATA------CC---CGTATCCGTA--------------------------------------------------------------------------------------------TC.............................................................................................................................................................................................................................	25	1	4.00	4	0	4	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGGCCATGCCGGACAGGTGG..............	23	1	4.00	4	2	2	0	0	0	0
..............................................................................................TCCACCCTATCCGCTGCCATA---C------C........................................................................................................................................................................................................................................................................................................................................................................................	23	1	4.00	4	1	3	0	0	0	0
............................................................................................................................................................................................................................................................................................................................TATAAGAT-GA---------TG------------------------------------------------TAGCTGAAGACTAG......................................................................................................	26	1	4.00	4	1	0	3	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGAGTGGCCATGCCGGACAGG.................	26	1	4.00	4	3	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGG---ACGTCGACGAGTGGCCATGC.........................	24	1	3.00	3	1	2	0	0	0	0
..............................TGTACTATGTGCCCCATAGGGAGCCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	3.00	3	3	0	0	0	0	0
.......................................................................................................TCCGCTGCCATA---C------CCATACCC------AT---------------CATA......................................................................................................................................................................................................................................................................................................................................................	27	1	3.00	3	0	3	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGAGTGGCCATGCCGGACAG..................	24	1	3.00	3	3	0	0	0	0	0
............................................................................................................TGCCATA---C------CCATACCC------AT---------------CATACCCA..................................................................................................................................................................................................................................................................................................................................................	26	1	3.00	3	1	2	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................GACTAGAA-------------------------------ATAC-TTTAATTGCAGC....................................................	24	1	3.00	3	0	3	0	0	0	0
.........................................................................................................................................................................................TA--------------------------------------------------------------------------------------------TCCGTTGTCACACCAAT---TGTAC-----------C..........................................................................................................................................................................................	25	1	3.00	3	1	2	0	0	0	0
.........................................................................................................................................................................................TA--------------------------------------------------------------------------------------------TCCGTTGTCACACCAAT---TGTAC-----------CTA........................................................................................................................................................................................	27	1	3.00	3	2	1	0	0	0	0
...................................................................................................................................................................................TATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCACACCAAT---...........................................................................................................................................................................................................	25	1	3.00	3	2	1	0	0	0	0
.......................................................................................................TCCGCTGCCATA---C------CCATACCC------AT---------------CATAC.....................................................................................................................................................................................................................................................................................................................................................	28	1	3.00	3	1	2	0	0	0	0
................................................................................................................................................................CCCATA------CC---CGTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCA.....................................................................................................................................................................................................................	28	1	3.00	3	3	0	0	0	0	0
....................................................................................................................................................................TA------CC---CGTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCACACC.................................................................................................................................................................................................................	28	1	3.00	3	1	2	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCATGCCGGACAGGTGGCGCCGG........	26	1	3.00	3	3	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGACGAGTGGCCATGCCGGACA...................	25	1	3.00	3	2	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC-TTTAATTGCAGCTCGG---ACGT.........................................	23	1	3.00	3	2	1	0	0	0	0
...................................................................................................................................................................................TATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCACACCAAT---T..........................................................................................................................................................................................................	26	1	3.00	3	1	2	0	0	0	0
......................................................................................................................................................................................................................................................................................................AT---TGTAC-----------CTATAAGAT-GA---------TG------------------------------------------------T...................................................................................................................	21	1	2.00	2	0	0	0	0	0	2
...............................................................................................................................................................................................................................................................................................................................................................................................................GAA-------------------------------ATAC-TTTAATTGCAGCTCGG---ACG..........................................	26	1	2.00	2	2	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGACGAGTGGCCATGCCGGAC....................	24	1	2.00	2	0	2	0	0	0	0
................................................................................................................................................................CCCATA------CC---CGTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGT.......................................................................................................................................................................................................................	26	1	2.00	2	1	1	0	0	0	0
.................................................................................................................................................................................CGTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCACACCAAT---...........................................................................................................................................................................................................	27	1	2.00	2	2	0	0	0	0	0
.........................................................................TCCC------TTACAGCGGTATCCACCCTATC.............................................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	1	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGACGAGTGGCCATGCCGGACAGG.................	27	1	2.00	2	2	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGAGTGGCCATGCCGGACAG..................	25	1	2.00	2	2	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC-TTTAATTGCAGCTCGG---ACGTC........................................	24	1	2.00	2	2	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................TATAAGAT-GA---------TG------------------------------------------------TAGCTGAAGACTA.......................................................................................................	25	1	2.00	2	1	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................TAAGAT-GA---------TG------------------------------------------------TAGCTGAAGACTAGAA-------------------------------A....................................................................	27	1	2.00	2	1	0	1	0	0	0
.....................................................................TCTATCCC------TTACAGCGGTATCCACCCT................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	2	0	0	0	0
............................................................................................................................................................CATACCCATA------CC---CGTATCCGTA--------------------------------------------------------------------------------------------TCCGT..........................................................................................................................................................................................................................	27	1	2.00	2	1	1	0	0	0	0
..............................................TAGGGAGCCACAAGATCACGTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	1	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGAGTGGCCATGCCGG......................	21	1	2.00	2	2	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-TTTAATTGCAGCTCGG---ACGTCGA......................................	25	1	2.00	2	2	0	0	0	0	0
................TCATCAAC---CACTGTACTATGTGCCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	1	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAGTGGCCATGCCGGACAGGTG...............	26	1	2.00	2	1	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCATGCCGGACAGGTG...............	19	1	2.00	2	0	2	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGAGTGGCCATGCCGGAC....................	22	1	2.00	2	2	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTGCAGCTCGG---ACGTCGACGAG..................................	26	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................TACCCATA------CC---CGTATCCGTA--------------------------------------------------------------------------------------------TCCGTTG........................................................................................................................................................................................................................	27	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................TCACACCAAT---TGTAC-----------CTATAAGAT-GA---------TG------------------------------------------------....................................................................................................................	28	1	2.00	2	1	1	0	0	0	0
................................TACTATGTGCCCCATAGGGAGCCACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGACGAGTGGCCATGCCGGACAG..................	26	1	2.00	2	2	0	0	0	0	0
.AC-----------CATCATCAAC---CACTGTACTATGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	2	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGG---ACGTCGACGAGTGGCCATGCC........................	25	1	2.00	2	2	0	0	0	0	0
....................................................................................................................................................................TA------CC---CGTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCACAC..................................................................................................................................................................................................................	27	1	2.00	2	0	2	0	0	0	0
.................................................................................................................TA---C------CCATACCC------AT---------------CATACCCATA------CC---C....................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	2	0	0	0	0
..............CATCATCAAC---CACTGTACTATGTGCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	1	1	0	0	0	0
................................................................................................CACCCTATCCGCTGCCATA---C------CCATA....................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.............................................................TCACGTTGTCTATCCC------TTACAGCGGTATC......................................................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
...........................................................GATCACGTTGTCTATCCC------TTACAGCGGTA........................................................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
................................TACTATGTGCCCCATAGGGAGCCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
................................................GGGAGCCACAAGATCACGTTGTCTAT............................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................CATACCCATA------CC---CGTATCCGTA--------------------------------------------------------------------------------------------TCC............................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
............................................................................................TATCCACCCTATCCGCTGCCATA---C------CCAC.....................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................CACACCAAT---TGTAC-----------CTATAAGAT-GA---------......................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
.................................................................................................................TA---C------CCATACCC------AT---------------CATACCCATA------CC---.....................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................TA------CC---CGTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCA.....................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCATGCCGGACAGGTGGCGCC..........	24	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................CACCAAT---TGTAC-----------CTATAAGAT-GA---------TG------------------------------------------------TAGC................................................................................................................	29	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................CTAGAA-------------------------------ATAC-TTTAATTGCAGCTCGG---.............................................	26	1	1.00	1	0	0	1	0	0	0
.AC-----------CATCATCAAC---CACTGTACTATGTGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
............................................CATAGGGAGCCACAAGATCACGTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
...................TCAAC---CACTGTACTATGTGCCCCATAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................CACCAAT---TGTAC-----------CTATAAGAT-GA---------TG------------------------------------------------TA..................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................T---------------CATACCCATA------CC---CGTATCCGTA--------------------------------------------------------------------------------------------TCCGT..........................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGTGGCCATGCCGGACAG..................	22	1	1.00	1	0	1	0	0	0	0
..............................................................CACGTTGTCTATCCC------TTACAGCGGTA........................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................AA-------------------------------ATAC-TTTAATTGCAGCTCGG---ACGTC........................................	27	1	1.00	1	1	0	0	0	0	0
..............................................TAGGGAGCCACAAGATCACGTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
.....................................................................................................TATCCGCTGCCATA---C------CCATACCC------AT---------------CATA......................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
..............................................................................................TCCACCCTATCCGCTGCCATA---C------CA.......................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
........................................................CAAGATCACGTTGTCTATCCC------TTACA..............................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................TATAAGAT-GA---------TG------------------------------------------------TAGCTGAAGACTAGA.....................................................................................................	27	1	1.00	1	1	0	0	0	0	0
...................TCAAC---CACTGTACTATGTGCCCCATAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
.....................AAC---CACTGTACTATGTGCCCCATAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
........................................................................ATCCC------TTACAGCGGTATCCACCCTATC.............................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
..............CATCATCAAC---CACTGTACTATGTGCCCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---ACGTCGACGAGTGGCCATGCCGGA.....................	25	1	1.00	1	0	1	0	0	0	0
...............................................................................................CCACCCTATCCGCTGCCATA---C------CCATACC..................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
............................................................................................................TGCCATA---C------CCATACCC------AT---------------CATACCC...................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAC-TTTAATTGCAGCTCGG---ACGTCGAC.....................................	28	1	1.00	1	1	0	0	0	0	0
.........................................................AAGATCACGTTGTCTATCCC------TTACA..............................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
...........................CACTGTACTATGTGCCCCATAGGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC-TTTAATTGCAGCTCGG---ACGTCGACG....................................	28	1	1.00	1	0	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGAGTGGCCATGCCGGA.....................	21	1	1.00	1	0	1	0	0	0	0
..............................................................................................TCCACCCTATCCGCTGCCATA---................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0
.......................................................................................................................................................................................CGTA--------------------------------------------------------------------------------------------TCCGTTGTCACACCAAT---TGTAC-----------C..........................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
.....................................................................TCTATCCC------TTACAGCGGTATCCACCCTA...............................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................A------CC---CGTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCACACC.................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
..........................................CCCATAGGGAGCCACAAGATCACGTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
......................AC---CACTGTACTATGTGCCCCATAGGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................TACCCATA------CC---CGTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGT.......................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................ATAAGAT-GA---------TG------------------------------------------------TAGCTGAAGACTA.......................................................................................................	24	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCCGGACAGGTGGCGCCG.........	21	1	1.00	1	0	1	0	0	0	0
.......................................................................TATCCC------TTACAGCGGTATCCACCCT................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
.................................................................................................................TA---C------CCATACCC------AT---------------CATACCCATA------CC---CGTA.................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
..............................TGTACTATGTGCCCCATAGGGAGCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGTGGCCATGCCGGACAGGT................	23	1	1.00	1	0	0	0	1	0	0
.................................................................................................................................................................................CGTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCACACCAAT---TG.........................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
.............................................................TCACGTTGTCTATCCC------TTACTT.............................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................TATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCACACCAAT---TGTA.......................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
............................................................ATCACGTTGTCTATCCC------TTACAGCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................AC-----------CTATAAGAT-GA---------TG------------------------------------------------TAGCTGAAG...........................................................................................................	24	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGCCATGCCGGACAGG.................	19	1	1.00	1	0	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCCATGCCGGACAGGTGG..............	21	1	1.00	1	0	0	0	0	0	1
.........................................................................................................................................................................................................................................................................................................................................................................................................AGACTAGAA-------------------------------ATAC-TTTAATTGCAGC....................................................	25	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................AT---------------CATACCCATA------CC---CGTATCCGTA--------------------------------------------------------------------------------------------TCC............................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................................................................A--------------------------------------------------------------------------------------------TCCGTTGTCACACCAAT---TGTAC-----------C..........................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGGCCATGCCGGACAGGTGGCGCC..........	27	1	1.00	1	1	0	0	0	0	0
..............CATCATCAAC---CACTGTACTATGTGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
................................TACTATGTGCCCCATAGGGAGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGCAGCTCGG---ACGTCGACGAGTG................................	27	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................AAGAT-GA---------TG------------------------------------------------TAGCTGAAGACTAGA.....................................................................................................	24	1	1.00	1	0	1	0	0	0	0
.........................................................................TCCC------TTACAGCGGTATCCACCCTATCCGC..........................................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................ATACCC------AT---------------CATACCCATA------CC---CGTATCC..............................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................AGAA-------------------------------ATAC-TTTAATTGCAGCTCGG---AC...........................................	26	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCCATGCCGGACAGGTGGC.............	22	1	1.00	1	0	1	0	0	0	0
.................................................................................................ACCCTATCCGCTGCCATA---C------CCATACC..................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................AAGACTAGAA-------------------------------ATAC-TTTAATTGCAGCTCG.................................................	29	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGTGGCCATGCCGGACAGG.................	23	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCTCGG---ACGTCGACGAGTGGCCA............................	27	1	1.00	1	1	0	0	0	0	0
...............ATCATCAAC---CACTGTACTATGTGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................TAGAA-------------------------------ATAC-TTTAATTGCAGCT...................................................	22	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---ACGTCGACGAGTGGCCATGCCG.......................	23	1	1.00	1	0	0	1	0	0	0
................................TACTATGTGCCCCATAGGGAGCCACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................C-TTTAATTGCAGCTCGG---ACGTCGACGA...................................	27	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................CATA------CC---CGTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCT.....................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................ATAAGAT-GA---------TG------------------------------------------------TAGCTGAAGACTAGAA-------------------------------A....................................................................	28	1	1.00	1	1	0	0	0	0	0
...........................................................................CC------TTACAGCGGTATCCACCCTATCCGC..........................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
...............................................................................................................CATA---C------CCATACCC------AT---------------CATACCCATA------CC---CG...................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
.....................................................................................................TATCCGCTGCCATA---C------CCATACCC------...........................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................C---CGTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCACACC.................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGGCCATGCCGGACAGGTG...............	22	1	1.00	1	0	1	0	0	0	0
....................................................GCCACAAGATCACGTTGTCTATCCC------T..................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................TA--------------------------------------------------------------------------------------------TCCGTTGTCACACCAAT---TGT........................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
...............ATCATCAAC---CACTGTACTATGTGCCCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................TATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCACACCAA...............................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.................CATCAAC---CACTGTACTATGTGCCCCATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
.AC-----------CATCATCAAC---CACTGTACTATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
.................CATCAAC---CACTGTACTATGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
..............................................TAGGGAGCCACAAGATCACGTTGTCTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................GAA-------------------------------ATAC-TTTAATTGCAGCTCGG---ACGTC........................................	28	1	1.00	1	1	0	0	0	0	0
.............................................................TCACGTTGTCTATCCC------TTACAGCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
........................................................CAAGATCACGTTGTCTATCCC------TTACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................GAA-------------------------------ATAC-TTTAATTGCAGCTCGG---A............................................	24	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGAGTGGCCATGCCGGACAT..................	24	1	1.00	1	0	1	0	0	0	0
........................................................CAAGATCACGTTGTCTATCCC------TTACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGTGGCCATGCCGGACAGGTG...............	24	1	1.00	1	0	0	0	0	1	0
...............................................................................................................CATA---C------CCATACCC------AT---------------CATACCCATA------CC---.....................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
..............................................................................................................CCATA---C------CCATACCC------AT---------------CATACCCATA------C.........................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
.......................................................................TATCCC------TTACAGCGGTATCCACCCTAT..............................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
................................................................................................................................TACCC------AT---------------CATACCCATA------CC---CGTATCCGT............................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................CTAGAA-------------------------------ATAC-TTTAATTGCAGCTCG.................................................	25	1	1.00	1	1	0	0	0	0	0
.................CATCAAC---CACTGTACTATGTGCCCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................TGTAC-----------CTATAAGAT-GA---------TG------------------------------------------------TAGC................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................TATAAGAT-GA---------TG------------------------------------------------TAGCTGAAGAC.........................................................................................................	23	1	1.00	1	0	1	0	0	0	0
...................................................................................TTACAGCGGTATCCACCC.................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0
..........................................CCCATAGGGAGCCACAAGATCACGTTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0
CAC-----------CATCATCAAC---CACTGTACTATGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.........................................................................TCCC------TTACAGCGGTATCCACC..................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................TAAGAT-GA---------TG------------------------------------------------TAGCTGAAGACTAGA.....................................................................................................	25	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................TAGAA-------------------------------ATAC-TTTAATTGCAGCTCGG---ACGT.........................................	29	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGCAGCTCGG---ACGTCGACGAGTT................................	27	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................AAGAT-GA---------TG------------------------------------------------TAGCTGAAGACTAGAA-------------------------------A....................................................................	26	1	1.00	1	1	0	0	0	0	0
............................................CATAGGGAGCCACAAGATCACGTTGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................A------CC---CGTATCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCACAC..................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCATGCCGGACAGGTGA..............	20	1	1.00	1	0	1	0	0	0	0
................................................................................................................................TACCC------AT---------------CATACCCATA------CC---CGTATCCG.............................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGG---ACGTCGACGAGTGGCCATGCCGGA.....................	28	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................TCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCACACCAAT---TG.........................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCATGCCGGACAGGTGGC.............	21	1	1.00	1	0	1	0	0	0	0
...........................................................................CC------TTACAGCGGTATCCACCCTATCC............................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
.AC-----------CATCATCAAC---CACTGTACTATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCATGCCGGACAGGTGGCGCCGG........	25	1	1.00	1	1	0	0	0	0	0
..............................................TAGGGAGCCACAAGATCACGTTGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGG---ACGTCGACGAGTGGCCA............................	22	1	1.00	1	1	0	0	0	0	0
..................................................................TTGTCTATCCC------TTACAGCGGTATCCACC..................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................CC---CGTATCCGTA--------------------------------------------------------------------------------------------TCCGTTG........................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---ACGTCGACGAGTGGCCATGCCGGACA...................	27	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGAGTGGCCATGCCGGACAGGT................	26	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCGG---ACGTCGACGAGTGGCC.............................	22	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGAGTGGCCATGCCGGA.....................	22	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................AGAA-------------------------------ATAC-TTTAATTGCAGCTCGG---A............................................	25	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................TCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCACACCAAT---TGTA.......................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTGCAGCTCGG---ACGTCGAC.....................................	23	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................CAAT---TGTAC-----------CTATAAGAT-GA---------TG------------------------------------------------TAGCT...............................................................................................................	27	1	1.00	1	0	1	0	0	0	0

droBip1

CACGCCAAAACCACCATCATCAAC---CACTGTACTATGTGCCCCACAGGGAGCCACAAGATCACGTTGTCTATCCC------CTACAGCGGTATCCGCACTACCCGCTGCCATA---C------CCATATCC------ATA------CCCATATCCGTACCCCCA------TC---TGTACCCGTA--------------------------------------------------------------------------------------------TCCGTTGTCGCACCAAT---TGTAT-----------CTATAAGAT-GG---------TG------------------------------------------------TAGCTGAAGCCTAGAA-------------------------------ATAC-TTTAATTGCAGCTCGG---ATGTCGACGAGTGGCCATGTCGGACAGGTGGCGCCGGTGTCCTGC	Size	Hit Count	Total Norm	Total
No Reads

dp5

TCCA--------T-C---ATCAGCCCCCACTGTACTATGTGCCCCATGAGGAGCCACAAGATCATGTTGTCTATCCA------CTCCAGCGCTATCCCTCG------------TA---C------CCATACCC------ATA------CCCGTATCCGCACCCG---------------------------------------TTCTATCTGTGAA--TC-----C-GCTCCC-----------------------------------------------------------------------------------------------------------------------------------CACC------------------TAGCTGAAGATTAGAATACATCTGTGCA-----------C-------CCAC-TCTACTTACAGCTCGG---ATGTGGACGAGTGGCCCTGCCGCGATGGTGGCGTCGGAGGCCTGC	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
............................................................................................................................................................CGCACCCG---------------------------------------TTCTATCTGTGAA--TC-----C-GC.................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	2	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTTACAGCTCGG---ATGTGGACGAGT.................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................ATGTGCCCCATGAGGAGCCACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCTCGG---ATGTGGAC.....................................	18	1	1.00	1	0	0	0	0	0	1	0	0	0	0
............................................................ATCATGTTGTCTATCCA------CTCCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGG---ATGTGGACGAGTGGC..............................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	1
...............................GTACTATGTGCCCCATGAGGAGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCCTGCCGCGATGGTGGCGTCGG........	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................CG---------------------------------------TTCTATCTGTGAA--TC-----C-GCTCCC-----------------------------------------------------------------------------------------------------------------------------------CC........................................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0

droPer2

TCCA--------T-C---ATCAGCCCCCACTGTACTATGTGCCCCATGAGGAGCCACAAGATCATGTTGTCTATCCA------CTCCAGCGCTATCCCTCG------------TA---C------CCATACCC------ATA------TCCGTATCCGCACCCG---------------------------------------TTCTATCTGTGAA--TC-----C-GCTCCC------------------------------------------------------------------------------------------------------------------------------------CCC------------------TAGCTGAAGATTAGAATACATCTGTGCA-----------C-------CCAC-TCTACTTACAGCTCGG---ATGTGGACGAGTGGCCCTGCCGCGATGGTGGCGTCGGAGGCCTGC	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGGACGAGTGGCCCTGCCGC......................	23	1	2.00	2	2	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGCCGCGATGGTGGCGTCGGA.......	25	1	2.00	2	2	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGACGAGTGGCCCTGCCGCG.....................	23	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGG---ATGTGGACGAGTGGCCCTGC.........................	23	1	1.00	1	0	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTGCA-----------C-------CCAC-TCTACTTACAGCT...................................................	27	1	1.00	1	0	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................A-----------C-------CCAC-TCTACTTACAGCTCGG---ATGT.........................................	26	1	1.00	1	1	0	0	0	0	0

droWil2

CACG--AAAACCA-C---ATCAGTCTTCCATCTTCTATGTGCCTCATG---AGCCTAATCATCAAGTTATCTATCCA------CTTCTACGTTATCCA---------------TATCC---------ATATGC---TTCGTA------TC------CGTTC---T------------------------------------------ATTTGTGAT---T-----C-GTTTCC------------TATACATACAAACATACTTCTATATATATATATATATACTTTAACATAGTT---TTAAT-----------CAATG------G---------TA--ATATCGAATCCGTAAA---------CTA------------------------------------------------------------------AAC-TCTATTTTTAGCTCGG---ATATTGATGAATGGCCCTGTAGAGAAGGTGGAGCTGGTGCTTTGA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAATGGCCCTGTAGAGAA...................	21	1	2.00	2	0	0	0	2	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGAATGGCCCTGTAGAGAAGGTG...............	27	1	1.00	1	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAATGGCCCTGTAGAGAAGGT................	24	1	1.00	1	0	0	1	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAGAGAAGGTGGAGCT..........	18	1	1.00	1	0	0	1	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGTGGAGCTGGTGCTTTGA	22	1	1.00	1	0	0	1	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGAATGGCCCTGTAGA......................	19	1	1.00	1	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAAGGTGGAGCTGGTGC.....	20	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCCCTGTAGAGAAGGTGGA.............	23	1	1.00	1	0	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCCTGTAGAGAAGGTGG..............	19	1	1.00	1	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCCCTGTAGAGAAGGTGG..............	22	1	1.00	1	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCCCTGTAGAGAAGGG................	20	1	1.00	1	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGATGAATGGCCCTGTAGAGAA...................	26	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGAATGGCCCTGTAGAGAAGGT................	27	1	1.00	1	0	0	1	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAATGGCCCTGTAGA......................	18	1	1.00	1	0	0	0	1	0
...............................CTTCTATGTGCCTCATG---AGCCTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGATGAATGGCCCTGTAGAGA....................	24	1	1.00	1	0	0	0	1	0

droVir3

------------------ATCAGC---CCACATTTTACGTGCCGCACGATCAGCCTCACGATCATGTTATATATCCA------CTTCTGCGACATCCC---------------TATCC---------ATACGC------ATA------TC------CGTAC---T------------------------------------------ATCTGTGAA--TTGTGTTT-GTGTTC------------AGTCCAGTCCCGCACCCCTCTCC-------------------------------------------------ATTGGCC-GA---------TA------------------------------------------------C------------------ACTCGTGT--------CCTAACCA-C-ATAAC-TCTACTTATAGGTCGG---ATGTGGACGAATGGCCCTGCCGCGACAACGGTGCCGGAACACTGG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAATGGCCCTGCCGCGACAAC................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................ATCTGTGAA--TTGTGTTT-GTGTTC------------.................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGACAACGGTGCCGGAACAC...	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................CATTTTACGTGCCGCACGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCCGCGACAACGGTGC...........	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGGTCGG---ATGTGGACGA...................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGG---ATGTGGACGAATGGCC.............................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGCCGCGACAACGGTGCCGGAACAC...	29	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................GTAC---T------------------------------------------ATCTGTGAA--TTGT........................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................ATGTTATATATCCA------CTTCTGCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

CACACTGC----A-A---ATCAGC---CCACATTTTATGTGCCGCACGATCAGCCTCACGATCATGTTATCTACCCA------CTACTGCGCCATCCT---------------TATCC---------ATACGC------ATA------TC------CGTAC---T------------------------------------------ATCTATAAGGGTTCCATTCAATGTTCAATGTTCTATGTACTGCAGCCCCGC-CCACTTTCCAC--A------CTCGT---C----------------------------------------------------------------------------CAGC------------------TAGCTG--------------------CACTCCTATCCTAATAC-CATTAAC-TCTACTTGTAGGTCGG---ATGTGGACGAATGGCCCTGCCGCGGCGGCGGTGCGGATGCACTGC	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...............................................................................................CCT---------------TATCC---------ATACGC------ATA------TC------CGTAC---..................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAATGGCCCTGCCGCGGCGGCG...............	23	1	1.00	1	1	0	0	0	0	0

droGri2

------------------ATCAGC---CCACATTTTATGTGCCGCACGATCAGCCTCACGATCATGTTGTATATCCA------CTACTGCGTCATCCA---------------TATCC---------AT---CATATCCATA------TC------CGTAT---T------------------------------------------ATCTATAAA--GTGTG------------------------------------------------------------------------------TGTTTGTTTGTTGTCTCTT------G---------TG--TTATCGTACCCATGAACCCCTCCAAATACAGCATTTGGCCCGAACT-------------------TTTTGGCTA-----------ACTG-TAATAAC-TTTACTTATAGGTCGG---ATGTGGATGATTGGCCCTGTCTGCGGGACGGTGCCGGAACCCTGC	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGATTGGCCCTGTCTGCGGGACGGT.............	27	2	0.50	1	0	1
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGATTGGCCCTGTC........................	18	2	0.50	1	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACGGTGCCGGAACCCT..	18	2	0.50	1	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGATGATTGGCCCTGTCTGC.....................	22	2	0.50	1	1	0

dsi_3793

2r:7978377-7978526 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-7.0	-6.7