dsi_3702

CDS [x_13978808_13979706_-]; exon [x_13978716_13979706_-]; intron [x_13979707_13980816_-]

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## TGAATTTTAAACTAAAATGGGACAGGTTTTTTAGTTTAACTTGGAAACGGGTTTCTCTATGTATATCAAACATTCTAAACAAAAAAATACGCAGCTAAATATACAGCTGGTTTTGATGATACACCGCAACTAGTTAAGCATTTGAGACTTTAAGTATGAAATGAGTTAGTTTAACTAATTGCAACCTTATATTTACTCAGGCATCGGTCCTGCCGATCACCTGAAGAGCCTGGGAATTCCCGTGAAACTG ************************************************((((..((((((((((((((..................((.(((((........))))))))))))).))))).......)))..))))..(((((....(((((((((..(((((((((...))))))).))...))))))))))))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M024 male body	M023 head	M025 embryo	M053 female body	SRR553486 Makindu_3 day-old ovaries	SRR553485 Chicharo_3 day-old ovaries	SRR902009 testis	SRR553487 NRT_0-2 hours eggs	SRR553488 RT_0-2 hours eggs
...........................................................................................................................................................................................................TCGGTCCTGCCGATCACCTGAAGAGCC....................	27	0	1	4.00	4	3	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................CCGATCACCTGAAGAGCC....................	18	0	1	2.00	2	1	1	0	0	0	0	0	0	0
...............................................................................................................................................................................................................TCCTGCCGATCACCTGAAGAGCCT...................	24	0	1	1.00	1	0	0	1	0	0	0	0	0	0
..............................................................................................................................................................................................................GTCCTGCCGATCACCTGAAGG.......................	21	1	1	1.00	1	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................GTCCTGCCGATCACCTGAAGAGC.....................	23	0	1	1.00	1	0	0	1	0	0	0	0	0	0
............................................................................................................................................................................................................CGGTCCTGCCGATCACCTGAAGA.......................	23	0	1	1.00	1	0	0	0	1	0	0	0	0	0
..................................................................................................................................................................................................................TGCCGATCACCTGAAGAGCCT...................	21	0	1	1.00	1	0	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................GGCATCGGTCCTGCCGATCACC.............................	22	0	1	1.00	1	0	1	0	0	0	0	0	0	0
...............................TAGTTGAACTTGGAAA...........................................................................................................................................................................................................	16	1	7	0.57	4	0	0	0	0	2	2	0	0	0
..........................................................................................................................................................................................................................AACCGAAGAGCCTGGGAA..............	18	2	9	0.22	2	0	0	0	2	0	0	0	0	0
.........AAAGCAAATGGGACAGGTTTT............................................................................................................................................................................................................................	21	3	6	0.17	1	0	0	0	0	0	0	1	0	0
........................GGTCTTTTAGTTTAA...................................................................................................................................................................................................................	15	1	19	0.11	2	0	0	0	0	0	0	0	1	1
..............................................................................................................................................................................................................................GAAGAGTCTGGGAAGTCTC.........	19	3	20	0.05	1	1	0	0	0	0	0	0	0	0
..............................TTAGTTGAACTTGGACA...........................................................................................................................................................................................................	17	2	20	0.05	1	0	0	0	0	1	0	0	0	0

ACTTAAAATTTGATTTTACCCTGTCCAAAAAATCAAATTGAACCTTTGCCCAAAGAGATACATATAGTTTGTAAGATTTGTTTTTTTATGCGTCGATTTATATGTCGACCAAAACTACTATGTGGCGTTGATCAATTCGTAAACTCTGAAATTCATACTTTACTCAATCAAATTGATTAACGTTGGAATATAAATGAGTCCGTAGCCAGGACGGCTAGTGGACTTCTCGGACCCTTAAGGGCACTTTGAC ************************************************((((..((((((((((((((..................((.(((((........))))))))))))).))))).......)))..))))..(((((....(((((((((..(((((((((...))))))).))...))))))))))))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR618934 dsim w501 ovaries	M023 head	SRR902008 ovaries	SRR553487 NRT_0-2 hours eggs	SRR553485 Chicharo_3 day-old ovaries	M024 male body
.............................................................................................................................................................................................................................CCTTCTCGGACCCTTAA............	17	1	1	1.00	1	1	0	0	0	0	0
..................CCCTGTCCAAGAGATCAAATT...................................................................................................................................................................................................................	21	2	1	1.00	1	0	1	0	0	0	0
.TTTGAAATTTGATTTTACCCT....................................................................................................................................................................................................................................	21	2	2	0.50	1	0	0	1	0	0	0
..............................................................................................................................................................................................................CAGGGCGGCTAGTGGAAGTCT.......................	21	3	2	0.50	1	1	0	0	0	0	0
.................................................................................................................................................................................................ATGAGTCCGGAGCCA..........................................	15	1	5	0.20	1	0	0	0	1	0	0
...AAAAATTTGCTTCTACCCTGT..................................................................................................................................................................................................................................	21	3	7	0.14	1	0	0	0	0	1	0
.............................................................................................................................................................................................................CCAAGAGAGCTAGTGGACT..........................	19	3	14	0.07	1	0	0	0	0	0	1
.......................................................................................................................................................................................TGGAATATAAAGGAATC..................................................	17	2	20	0.05	1	1	0	0	0	0	0

Species	Coordinate	ID	Alignment
droSim2	x:13979657-13979906 -	dsi_3702	TGAATTTTAAACTAAAATGGGACAGGTTTTTTAGTTTAACTTGGAAACGGGTTTCTCTATGTATATCAA-ACATTCTAAACAAA----AAAATACGCAGCTAAATAT----ACAGCTGGTT-TTGATGATACACCGCAACTAGTTAAGCATTTGAGACTT--------------------------------------------------------TAAGTATGAAATGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTTAACTAATTGCAACCTTATATTTACTCAGGCATCGGTCCTGCCGATCACCTGAAGAGCCTGGGAATTCCCGTGAAACTG
droSec2	scaffold_32:237315-237564 -		TGAATTTTAAACTAAAATGGGACAGGTTTTTTAGTTTAACTTAGGAACGGGTTTCTCTATGTATATCAA-ACATTCTAAGCAAA----AAAATACGCAGTTAAATAT----ACAGGTGGTT-TTGATGATATACCGCAACTAGTTAAGCATTTGAGACTT--------------------------------------------------------TAAATATGAAATGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTTAACTAATTGCCACTTTTTATTTTCTCAGGCATCGGTCCTGCCGATCACTTGAAGAGCCTGGGAATTCCCGTGAAACTG
dm3	chrX:14796927-14797180 -		TGAATTTTAAACTAAAATGGGACTGGTTTTTTAGTTTGACTTAGGAACTGGTTTCTCTATGTATATCAA-ACATTCTAAACAAAACAAAAAATACGCAGTTAAATAT----ACAGCTGGTT-TTAATGATACACCGAAACTAGTTAAGCATTTGAGACTT--------------------------------------------------------TAAATATGAAGTGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTTAAGTAATTGAAACTTTTTATTTTCTCAGGCATCGGTCCCGCCGATCACTTGAAGAGCCTGGGAATTCCCGTGAAACTG
droEre2	scaffold_4690:12203215-12203523 +		TGAATTTTAAACTTAAATGGGGCAGGTTTTTTAGTTTAACTTTGAAACAGGTTTCTCTATGTATATCAA-ACATTCTAAACAA-----GAAATACGCAATAGAATAT----ACAGCTGGTT-ATGATGATACACCGAAACTAATTAGGCATTTGAGGGTT--------------------------------------------------------TTAATATGAAACGAAA--------------------------AAAATGTTG------------------------------------------------------------------------------------------------------------------------TTCAA---AGAAGTATATATGAAAATG--TTATAGAGGGTTTATAG---------TAAAAAACAATAGCCTAACTAATTCATACTTAATAATTTCACAGGCGTCGGTCCCGCCGATCACTTGAAGAGCCTGGGAATTCCCGTGAAACTG
droYak3	X:9008592-9008861 -		TGAATTTTAAACTGAAATGGGACAGGTTTTTTAGTTTAACTTAGGAACAGGTTTCTCTATGTATATCAA-ACATTCTAAACTA-----GAAATACGCAGTAGAATATACATACAGCTGGTT-ATGAAGATACACCGAAACTAATTAGGCATTTGAGAGTT--------------------------------------------------------TTAATATGAAAT----------------------TTAAAAAAAAATTGTTATAT---------------------------------------------------------------------------------------------------------------------------------------------------------GTACATATATATCTAATCTT----------------------------ATCTTACTTTCTCAGGCATCGGACCCGCCGATCACTTGAAGAGCCTGGGAATCCCCGTAAAATTG
droEug1	scf7180000409181:191781-192028 -		TGAATTTTAAGCTAATATAGGACAGGTTCTTAGGTTTATCTTAG-AACAGGTTTC--TATGTATATCAACACATTCTAAACTAA----AATATGCGCAGCAGAATAA----ACAGCTGAGT-TTA----------GAACTTAATTAGTCTTTAAAAAGTT--------------------------------------------------------TAAATATTAATTATTTTTGTAGAATTTTC-------AACCAAAAACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTTTTTGCCCTCCCACAGGCGTCGGTCCCGCCGATCACCTGAAGAGCCTGGGAATCCCCTTGAAACTG
droBia1	scf7180000299226:663920-664227 +		AGAAT----------------------------------------------------------------------------------------------------GC----ACAGCTGGTT-TTGATGATATTAAGATGTTAGTTGGGCCTTCGGAAGTTATGTATGTATATAAGATAAATATAAGAAGATACCACTTTTTAATGGTTCTAACATTTGAAT---------------AGG------------------AAAAGTGTGGTTTA----------------------------------TCTTTAAAACTAGAACTTAGGAAA----------ATAATA-ACGATGAGAAATTAATATTCCTTA-----AAAATCCCATTTTTCAA---AGAGT----TTCAATAATTCCTAAACAATTTTTC---CTATT--TCTT----------------------------ATATCCATTTCTAAGGCGTCGGTCCCGCCGAACACCTGAAGAGCCTGGGCATCCCCGTGAAACTG
droTak1	scf7180000414375:31176-31444 +		TGAATTTTAAACTGAAATGGGACAGGTTCTTCTGCCTAACTTAG-AACAGGTTTC--AAAGTATATCAA-ACATTTTAACCAA-----AAAATACGCAGTAGAATGC----TCAGCTGGTTTTTGATAATATTAAGATCTTAATTAGGAGTTTGGGAGTT--------------------------------------------------------TATTT---------------AATTATGCCAAAATTCGAAATTATATTTATTTAC---------------------------------------------------------------------------------------------------------------------------------------------------------TTATTTATATTTTTAA--TT----------------------------ATTTATTTTTTTAAGGCGTCGGTCCTGCCGATCACCTGAAGAGCCTGGGAATCCCCGTGAAACTG
droEle1	scf7180000491277:258493-258605 -		TGAATTTAAAACCAAAATGGGACAGGTTCTTTAGTTTATCTTAT-AACTGGTTTC--CATGTTTATTTA-ACATTCTAA---------AAAGTACGCAGCAGAATTA----TCAGTTGTTT-TTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATA
droRho1	scf7180000779914:231019-231199 +		TGAATTTTAAACCAAATTGGGACAGGTTT-TTAGTTTGTTTTATAAACTGGTTTC--TATATATATCGA-ACATTCTGA---------AAAGTACGCAGTAGAATGT----CCAGATGGTT-TTGATAAAATTAAGATTTTAATTAGGCAATCGGGAGAT--------------------------------------------------------TGAAT---------------AAAA-CTTC-------AAACAAAAAATGTATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCAA----------------------------------------------------------------------ATT
droFic1	scf7180000453277:314220-314570 -		------------------------GGTTCTTAAGTTTATCTTTG-AACAGGTTTC--TATGTATATCCA-ACATTCTAA---------TAAATACGCAGTAGAATGG----CCAGCGGGTT-CTTATAATGTTAAGATTTTAATTAGGCATTCGGGAGTT--------------------------------------------------------TAAAA---------------AAAAATGTC-------AAACCTAAACT-TTTGTTATCATAATATAATTAAAACAAATATATTTCCTTGA--------------------TAAAATATAAATTCACAATACCCGCTGGGAAATCTTACTTTCTTGTTGAA-------TAGTTTTCAAAAAATATGTATTTGTGAAAATCCCTTATTAATTGTTTATA-------------------------------------TTTTCATATTTTTTAAGGCGTCGGTTCCGCCGATCACCTGAAGAGTCTGGGAATCCCCGTGAAACTG
droKik1	scf7180000302517:1004016-1004089 +		AAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTATTTTTCTCTTCCCCAGGCATCGGCCCCGCCGATCACCTCAAGAGCCTGGGCATTCCCGTAAAATTG
droAna3	scaffold_13335:673924-673983 -		TATATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGCGTTGGACCCGCCGATCACCTGAAGAGCCTGGGTATCCCCCTGAAACTG
droBip1	scf7180000395970:33990-34043 -		T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGTGTCGGACCCGCTGATCACCTGAAGAGCCTGGGTATCCCCCTGAAACTG
dp5	XL_group1a:5842514-5842588 -		ATTAATCACAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCATTTCGCCAGGCATTGGACCCGCTGATCATCTGAAGGACGTGGGTATCCCGGTCAAACTG
droPer2	scaffold_63:101368-101442 +		ATTAATCACAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCATATCGCCAGGCATTGGACCCGCTGATCATCTGAAGGACGTGGGTATCCCGGTCAAACTG
droWil2	scf2_1100000004515:4044919-4044991 -		CTGATTTCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTATTAGGAATTGGACCTGCTGATCATTTGAAAAACTTGGGCATTCCTGTCAAAGCT
droVir3	scaffold_12928:2042313-2042365 +		---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGCATTGGACCCGCTGAGCATCTGAGAAGCGTTGGCGTGCCCGTCAAACTG
droMoj3	scaffold_6473:1919183-1919234 +		----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCATTGGCCCAGCCGAGCACCTGAGAAGCATTGGCGTGCCCGTTAAACTG
droGri2	scaffold_15203:8601016-8601068 -		---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGCATTGGACCAGCCAAGCATCTGAAGAGCGTTGGCGTTCCCGTTAAGCTG

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

TGAATTTTAAACTAAAATGGGACAGGTTTTTTAGTTTAACTTGGAAACGGGTTTCTCTATGTATATCAA-ACATTCTAAACAAA----AAAATACGCAGCTAAATAT----ACAGCTGGTT-TTGATGATACACCGCAACTAGTTAAGCATTTGAGACTT--------------------------------------------------------TAAGTATGAAATGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTTAACTAATTGCAACCTTATATTTACTCAGGCATCGGTCCTGCCGATCACCTGAAGAGCCTGGGAATTCCCGTGAAACTG	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTCCTGCCGATCACCTGAAGAGCC....................	27	1	4.00	4	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGATCACCTGAAGAGCC....................	18	1	2.00	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGCCGATCACCTGAAGAGCCT...................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTGCCGATCACCTGAAGG.......................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTGCCGATCACCTGAAGAGC.....................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTCCTGCCGATCACCTGAAGA.......................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGATCACCTGAAGAGCCT...................	21	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATCGGTCCTGCCGATCACC.............................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

TGAATTTTAAACTAAAATGGGACAGGTTTTTTAGTTTAACTTAGGAACGGGTTTCTCTATGTATATCAA-ACATTCTAAGCAAA----AAAATACGCAGTTAAATAT----ACAGGTGGTT-TTGATGATATACCGCAACTAGTTAAGCATTTGAGACTT--------------------------------------------------------TAAATATGAAATGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTTAACTAATTGCCACTTTTTATTTTCTCAGGCATCGGTCCTGCCGATCACTTGAAGAGCCTGGGAATTCCCGTGAAACTG	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGAAGAGCCTGGGAATTCCC.........	22	1	1.00	1	0	0	0	1
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTCCTGCCGATCACTTGAAGA.......................	23	1	1.00	1	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTCCTGCCGATCACTTGAAGAGCC....................	27	1	1.00	1	0	1	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCACTTGAAGAGCCTGGGA...............	21	1	1.00	1	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCTGCCGATCACTTGAAGA.......................	22	1	1.00	1	0	1	0	0

dm3

TGAATTTTAAACTAAAATGGGACTGGTTTTTTAGTTTGACTTAGGAACTGGTTTCTCTATGTATATCAA-ACATTCTAAACAAAACAAAAAATACGCAGTTAAATAT----ACAGCTGGTT-TTAATGATACACCGAAACTAGTTAAGCATTTGAGACTT--------------------------------------------------------TAAATATGAAGTGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTTAAGTAATTGAAACTTTTTATTTTCTCAGGCATCGGTCCCGCCGATCACTTGAAGAGCCTGGGAATTCCCGTGAAACTG	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTGAAGAGCCTGGGA...............	18	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCCTGGGAATTCCCGTG......	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCACTTGAAGAGCCTGGGA...............	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................ATACGCAGTTAAATAT----ACAGCTGGTT-..............................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGATCACTTGAAGAGCC....................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTTGAAGAGCCTGGGA...............	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCCTGGGAATTCCCGTGAAACTG	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTTGAAGAGCCTGGGAATTCCCGT.......	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................TTAAGCATTTGAGACTT--------------------------------------------------------TAAATATGAAGTG...................................................................................................................................................................................................................................................................................................................	30	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGATCACTTGAAGAGCCT...................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCACTTGAAGAGCCTGGGAA..............	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCACTTGAAGAGCCTGG.................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGGGAATTCCCGTGAAACTG	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGAAACTTTTTATTTTCTCAG..................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGAAGAGCCTGGGAAT.............	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

TGAATTTTAAACTTAAATGGGGCAGGTTTTTTAGTTTAACTTTGAAACAGGTTTCTCTATGTATATCAA-ACATTCTAAACAA-----GAAATACGCAATAGAATAT----ACAGCTGGTT-ATGATGATACACCGAAACTAATTAGGCATTTGAGGGTT--------------------------------------------------------TTAATATGAAACGAAA--------------------------AAAATGTTG------------------------------------------------------------------------------------------------------------------------TTCAA---AGAAGTATATATGAAAATG--TTATAGAGGGTTTATAG---------TAAAAAACAATAGCCTAACTAATTCATACTTAATAATTTCACAGGCGTCGGTCCCGCCGATCACTTGAAGAGCCTGGGAATTCCCGTGAAACTG	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCCGCCGATCACTTGAAGAG......................	23	1	1.00	1	0	0	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCACTTGAAGAGCCTGGGAA..............	22	1	1.00	1	0	0	0	0	1	0	0

droYak3

TGAATTTTAAACTGAAATGGGACAGGTTTTTTAGTTTAACTTAGGAACAGGTTTCTCTATGTATATCAA-ACATTCTAAACTA-----GAAATACGCAGTAGAATATACATACAGCTGGTT-ATGAAGATACACCGAAACTAATTAGGCATTTGAGAGTT--------------------------------------------------------TTAATATGAAAT----------------------TTAAAAAAAAATTGTTATAT---------------------------------------------------------------------------------------------------------------------------------------------------------GTACATATATATCTAATCTT----------------------------ATCTTACTTTCTCAGGCATCGGACCCGCCGATCACTTGAAGAGCCTGGGAATCCCCGTAAAATTG	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCACTTGAAGAGCCTGGGA...............	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACTTGAAGAGCCTGGGA...............	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGACCCGCCGATCACTTGAAGAGCCT...................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGATCACTTGAAGAGCCTGGGAATCCC..........	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...ATTTTAAACTGAAATGGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	1	0	0	0	0	0

droEug1

TGAATTTTAAGCTAATATAGGACAGGTTCTTAGGTTTATCTTAG-AACAGGTTTC--TATGTATATCAACACATTCTAAACTAA----AATATGCGCAGCAGAATAA----ACAGCTGAGT-TTA----------GAACTTAATTAGTCTTTAAAAAGTT--------------------------------------------------------TAAATATTAATTATTTTTGTAGAATTTTC-------AACCAAAAACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTTTTTGCCCTCCCACAGGCGTCGGTCCCGCCGATCACCTGAAGAGCCTGGGAATCCCCTTGAAACTG	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AGAAT----------------------------------------------------------------------------------------------------GC----ACAGCTGGTT-TTGATGATATTAAGATGTTAGTTGGGCCTTCGGAAGTTATGTATGTATATAAGATAAATATAAGAAGATACCACTTTTTAATGGTTCTAACATTTGAAT---------------AGG------------------AAAAGTGTGGTTTA----------------------------------TCTTTAAAACTAGAACTTAGGAAA----------ATAATA-ACGATGAGAAATTAATATTCCTTA-----AAAATCCCATTTTTCAA---AGAGT----TTCAATAATTCCTAAACAATTTTTC---CTATT--TCTT----------------------------ATATCCATTTCTAAGGCGTCGGTCCCGCCGAACACCTGAAGAGCCTGGGCATCCCCGTGAAACTG	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TGAATTTTAAACTGAAATGGGACAGGTTCTTCTGCCTAACTTAG-AACAGGTTTC--AAAGTATATCAA-ACATTTTAACCAA-----AAAATACGCAGTAGAATGC----TCAGCTGGTTTTTGATAATATTAAGATCTTAATTAGGAGTTTGGGAGTT--------------------------------------------------------TATTT---------------AATTATGCCAAAATTCGAAATTATATTTATTTAC---------------------------------------------------------------------------------------------------------------------------------------------------------TTATTTATATTTTTAA--TT----------------------------ATTTATTTTTTTAAGGCGTCGGTCCTGCCGATCACCTGAAGAGCCTGGGAATCCCCGTGAAACTG	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TGAATTTAAAACCAAAATGGGACAGGTTCTTTAGTTTATCTTAT-AACTGGTTTC--CATGTTTATTTA-ACATTCTAA---------AAAGTACGCAGCAGAATTA----TCAGTTGTTT-TTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TGAATTTTAAACCAAATTGGGACAGGTTT-TTAGTTTGTTTTATAAACTGGTTTC--TATATATATCGA-ACATTCTGA---------AAAGTACGCAGTAGAATGT----CCAGATGGTT-TTGATAAAATTAAGATTTTAATTAGGCAATCGGGAGAT--------------------------------------------------------TGAAT---------------AAAA-CTTC-------AAACAAAAAATGTATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCAA----------------------------------------------------------------------ATT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

------------------------GGTTCTTAAGTTTATCTTTG-AACAGGTTTC--TATGTATATCCA-ACATTCTAA---------TAAATACGCAGTAGAATGG----CCAGCGGGTT-CTTATAATGTTAAGATTTTAATTAGGCATTCGGGAGTT--------------------------------------------------------TAAAA---------------AAAAATGTC-------AAACCTAAACT-TTTGTTATCATAATATAATTAAAACAAATATATTTCCTTGA--------------------TAAAATATAAATTCACAATACCCGCTGGGAAATCTTACTTTCTTGTTGAA-------TAGTTTTCAAAAAATATGTATTTGTGAAAATCCCTTATTAATTGTTTATA-------------------------------------TTTTCATATTTTTTAAGGCGTCGGTTCCGCCGATCACCTGAAGAGTCTGGGAATCCCCGTGAAACTG	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTATTTTTCTCTTCCCCAGGCATCGGCCCCGCCGATCACCTCAAGAGCCTGGGCATTCCCGTAAAATTG	Size	Hit Count	Total Norm	Total
No Reads

droAna3

TATATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGCGTTGGACCCGCCGATCACCTGAAGAGCCTGGGTATCCCCCTGAAACTG	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTTGGACCCGCCGATCACC.............................	22	1	2.00	2	1	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCTGAAGAGCCTGGGTATCCCCCTGA.....	29	1	1.00	1	0	0	0	0	0	1
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGAAGAGCCTGGGTATCC...........	22	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGAAGAGCCTGGGC...............	18	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGAGCCTGGGTATCCCCC........	22	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACCTGAAGAGCCTGGGTATCCCC.........	26	1	1.00	1	0	0	0	0	0	1

droBip1

T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGTGTCGGACCCGCTGATCACCTGAAGAGCCTGGGTATCCCCCTGAAACTG	Size	Hit Count	Total Norm	Total
No Reads

dp5

ATTAATCACAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCATTTCGCCAGGCATTGGACCCGCTGATCATCTGAAGGACGTGGGTATCCCGGTCAAACTG	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCATTGGACCCGCTGAC.................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACCCGCTGATCATCTGAAG........................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACCCGCTGATCATCTG...........................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATCCCGGTCAAACTG	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

ATTAATCACAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCATATCGCCAGGCATTGGACCCGCTGATCATCTGAAGGACGTGGGTATCCCGGTCAAACTG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCGCTGATCATCTGAAGGACGT...................	25	1	20.00	20	19	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACCCGCTGATCATCTGAAG........................	24	1	18.00	18	18	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACCCGCTGATCATCTGAA.........................	23	1	8.00	8	8	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGGACCCGCTGATCATCTGAAGGAC.....................	28	1	7.00	7	7	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATCATCTGAAGGACGTGG.................	22	1	6.00	6	6	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACCCGCTGATCATCTGAAGGACGT...................	29	1	5.00	5	5	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGGACCCGCTGATCATCTGAA.........................	24	1	4.00	4	4	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCGCTGATCATCTGAAGGACGTG..................	26	1	3.00	3	3	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTGGACCCGCTGATCATCTGAAGGAC.....................	29	1	3.00	3	3	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATCATCTGAAGGAC.....................	18	1	3.00	3	3	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCGCTGATCATCTGAAGGACGG...................	25	1	3.00	3	3	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGCTGATCATCTGAAGGACGT...................	23	1	3.00	3	3	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACCCGCTGATCATCTGAAGGAC.....................	27	1	3.00	3	3	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCGCTGATCATCTGAAGGAC.....................	23	1	2.00	2	2	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATTGGACCCGCTGATCATCTGAAG........................	27	1	2.00	2	2	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCGCTGATCATCTGAAGGACGT...................	24	1	2.00	2	2	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACCCGCTGATCATCTGAAGGACGG...................	29	1	2.00	2	2	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACCCGCTGATCATCTGAAGGACGT...................	26	1	2.00	2	2	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGGACCCGCTGATCATCTGAAG........................	25	1	2.00	2	2	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATTGGACCCGCTGATCATCTGAA.........................	26	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATCATCTGAAGGACGTGGGT...............	24	1	1.00	1	0	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACCCGCTGATCATCTGAAGG.......................	25	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACCCGCTGATCATCTGAAGGAC.....................	24	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGACGTGGGTATCCCGGT.......	20	1	1.00	1	0	0	1	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATCCCGGTCAAACTG	18	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATTGGACCCGCTGATCATCTG...........................	24	1	1.00	1	1	0	0	0	0	0

droWil2

CTGATTTCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTATTAGGAATTGGACCTGCTGATCATTTGAAAAACTTGGGCATTCCTGTCAAAGCT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAACTTGGGCATTCCTGTC......	22	1	2.00	2	0	0	0	2	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTGAAAAACTTGGGC...............	18	1	2.00	2	0	0	0	2	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCTGATCATTTGAAAAACTTG..................	24	1	1.00	1	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCTGATCATTTGAAAAACTTGGGCA..............	28	1	1.00	1	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTGGGCATTCCTGTC......	18	1	1.00	1	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCATTTGAAAAACTTGGGC...............	21	1	1.00	1	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGCATTCCTGTCAAAGC.	20	1	1.00	1	0	0	0	0	1
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGCTGATCATTTGAAAAACTTGGGC...............	28	1	1.00	1	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAAAAACTTGGGCATTCC..........	21	1	1.00	1	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTGAAAAACTTGGGCATTCCTGT.......	26	1	1.00	1	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGATCATTTGAAAAACTTGGGC...............	26	1	1.00	1	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTATTAGGAATTGGAC.........................................	21	1	1.00	1	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGACCTGCTGATCATTTGAAAA.......................	24	1	1.00	1	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGACCTGCTGATCATTTGAAAAAC.....................	26	1	1.00	1	1	0	0	0	0
...ATTTCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTATTAGG.................................................	21	1	1.00	1	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTGCTGATCATTTGAAAAAC.....................	23	1	1.00	1	0	0	0	1	0

droVir3

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGCATTGGACCCGCTGAGCATCTGAGAAGCGTTGGCGTGCCCGTCAAACTG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCATTGGACCCGCTGAGC................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCATTGGACCCGCTGAGCATCT............................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATTGGACCCGCTGAGC................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACCCGCTGAGCATC.............................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGCATCTGAGAAGCGTTGGC...............	24	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGAAGCGTTGGCGTGCC..........	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCATCTGAGAAGCGTTGGC...............	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACCCGCTGAGCATCTGAG.........................	23	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTGGACCCGCTGAGCATCTGAGA........................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGCGTGCCCGTCAAACTG	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCATCTGAGAAGCGTTGGCGT.............	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTTGGCGTGCCCGTCAAACT.	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCATTGGACCCGCTGAGCATCTGAGAA.......................	29	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACCCGCTGAGCATCT............................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCATTGGACCCGCTGAGCATC.............................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCATCTGAGAAGCGTTGGCGTG............	26	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGCGTGCCCGTCAAAC..	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAGAAGCGTTGGCGT.............	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACCCGCTGAGCATCTG...........................	21	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGACCCGCTGAGCATCTGAG.........................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAGAAGCGTTGGCGTGCCC.........	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAGAAGCGTTGGCGTGCCCGTC......	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGAGCATCTGAGAAGC.....................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCATTGGCCCAGCCGAGCACCTGAGAAGCATTGGCGTGCCCGTTAAACTG	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
No Reads

droGri2

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGCATTGGACCAGCCAAGCATCTGAAGAGCGTTGGCGTTCCCGTTAAGCTG	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dsi_3702

x:13979707-13979856 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads