ID:

dsi_3673

 Coordinate:

x:12612113-12612249 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.0 -5.9 -5.6 -5.5

Flybase annnotation

exon [x_12612250_12612394_+]; CDS [x_12612250_12612394_+]; exon [x_12611872_12612112_+]; CDS [x_12611872_12612112_+]; intron [x_12612113_12612249_+]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------##################################################
CAGCGCCATGGAACAAGCGGCGATTTCATTCAACCGTTAGACGTCCGCCGGTTAGTTTCGTTCGCAGATAAAGCCACATAACAAAAAAATATATATTTTAAAACACATAGAAACGTTAAATATCGAACAAGAAGTGATTGTTGATTGCTAAAGTGAATATCCACCCCTTCCTCTTTTTTTTTCTCAGTTCCTTTTCAACCAGCCACAAAATGCCGTCGTCGTCGAAAGCGCTCACAC
*****************************************************..((......((((((((...(((........................................................))).)))))...)))......))********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR902008
ovaries
 M053
female body
 GSM343915
embryo
...............................................................................................................................................................................................................AAATGCCGTCGTCGTCGA............ 18 0 3 10.33 31 25 2 3 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................................................................AAATGCCGTCGTCGTCGAAAGCGC...... 24 0 3 4.00 12 8 0 4 0 0 0 0 0 0 0 0 0
..........................TATTCAACCGTTAGACGTCCGCTG........................................................................................................................................................................................... 24 2 2 2.50 5 0 0 0 2 2 0 1 0 0 0 0 0
................................................................................................................................................................................................................AATGCCGTCGTCGTCGAA........... 18 0 3 1.67 5 0 2 3 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGCCGTCGTCGTCGAAAGCGCTCACA. 26 0 3 1.67 5 0 0 0 1 1 0 2 1 0 0 0 0
...............................................................................................................................................................................................................AAATGCCGTCGTCGTCGAAAGCGCTC.... 26 0 3 1.33 4 3 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AAATGCCGTCGTCGTCGAAAGC........ 22 0 3 1.33 4 3 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AAATGCCGTCGTCGTCGAAAGCG....... 23 0 3 1.33 4 4 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTCAACCAGCCACAAAATGCCGTCGTC................. 27 0 3 1.33 4 0 0 0 1 1 0 2 0 0 0 0 0
...............................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA........... 19 0 3 1.33 4 2 0 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................TGATTGTTGATTGCTAAAGTGA................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
........................................ACGTCCGCCGGTTAGTTTCG................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTCAACCAGCCACAAAATGCCGTCGT.................. 26 0 3 1.00 3 0 0 0 0 1 0 0 0 0 0 2 0
..................................CGTTAGACGTCCGCCGG.......................................................................................................................................................................................... 17 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................TCAACCAGCCACAAAATGCCGTCGTCGTC.............. 29 0 3 1.00 3 0 0 0 3 0 0 0 0 0 0 0 0
.....................................................AGTTTCGTTCGCAGATAAAG.................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................AGTTTCGTTCGCAGATAA...................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................CGTTAGACGTCCGCCGGTT........................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................GTTAGACGTCCGCCGGT......................................................................................................................................................................................... 17 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................AGAAGTGATTGTTGATTGCC........................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................ACTTTCGTTCGCAGATAAAGC................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................ATCGAACAAGAAGTGATTGTT............................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................TTTCGTTCGCAGATAAAGCCAC................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
........................................................TTCGTTCGCAGATAAAGCCA................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CACAAAATGCCGTCGTCGTCGA............ 22 0 3 1.00 3 0 0 1 1 1 0 0 0 0 0 0 0
.....................GATTTCATTCAACCGTTAGACGT................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AAATGCCGTCGTCGTCGG............ 18 1 4 1.00 4 2 0 2 0 0 0 0 0 0 0 0 0
......................ATTTCATTCAACCGTTAGACGT................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCAACCAGCCACAAAATGCCGTCGTCG................ 27 0 3 1.00 3 0 0 0 0 0 0 0 2 0 1 0 0
.................................................................................................................................................................................................TTCAACCAGCCACAAAATGCCGTCGTCGT............... 29 0 3 1.00 3 0 0 0 2 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................AACCAGCCACAAAATGCCGTCGTCGT............... 26 0 3 0.67 2 0 0 0 0 0 0 0 0 0 2 0 0
.................................................................................................................................................................................................TTCAACCAGCCACAAAATGCCGTCGTCGTCGA............ 32 0 3 0.67 2 0 0 0 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AAATGCCGTCGTCGTCGAAAGCGCT..... 25 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CACAAAATGCCGTCGTCGTCGAAAGCGCT..... 29 0 3 0.67 2 0 0 0 1 0 0 1 0 0 0 0 0
............................................................................................................................................................................................TCCTTTTCAACCAGCCACAAAATGCCGT..................... 28 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CACAAAATGCCGTCGTCGTCGAAA.......... 24 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CACAAAATGCCGTCGTCGTCGAAAGC........ 26 0 3 0.67 2 1 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................TTTTCAACCAGCCACAAAATGCCGTCGT.................. 28 0 3 0.67 2 0 0 0 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................AGCCACAAAATGCCGTCGTCGTCGA............ 25 0 3 0.67 2 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................AGCCACAAAATGCCGTCGTCGTCGAA........... 26 0 3 0.67 2 0 0 0 0 1 0 1 0 0 0 0 0
............................................................................................................................................................................................................ACAAAATGCCGTCGTCGTCGA............ 21 0 3 0.67 2 0 0 0 1 0 0 0 0 0 1 0 0
..................................................................................................................................................................................................................TGCCGTCGTCGTCGAAAGCGCTCACAC 27 0 3 0.67 2 0 0 0 0 0 1 0 1 0 0 0 0
...............................................................................................................................................................................................................AAATGCCGTCGTCGTCGAAAG......... 21 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................AGTGATTGTTGATTGCT........................................................................................ 17 0 5 0.60 3 0 0 0 0 0 2 1 0 0 0 0 0
...........................ATTCAACCGTTAGACGTCCGC............................................................................................................................................................................................. 21 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
.............................TCAACCGTTAGACGTCCGCC............................................................................................................................................................................................ 20 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
.............................................CGCCGGTTAGTTACG................................................................................................................................................................................. 15 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
.................................CCGTTAGACGTCCGCCG........................................................................................................................................................................................... 17 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................TATTCAACCGTTAGACGTCCGCTGC.......................................................................................................................................................................................... 25 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
..........................TATTCAACCGTTAGACGTCCGCT............................................................................................................................................................................................ 23 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
..........................CATTCAACCGTTAGACGTCCGC............................................................................................................................................................................................. 22 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
..............................CAACCGTTAGACGTCCGCC............................................................................................................................................................................................ 19 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................AACCGTTAGACGTCCGCCG........................................................................................................................................................................................... 19 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TCGAACAAGAAGTGATTT................................................................................................. 18 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................TATTCAACCGTTAGACGTCCGC............................................................................................................................................................................................. 22 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................ATTCAACCGTTAGACGTC................................................................................................................................................................................................ 18 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................GTGATTGTTGATTGCT........................................................................................ 16 0 5 0.40 2 0 0 0 0 0 2 0 0 0 0 0 0
..............................................................................................................................................................................................................AAAATGCCGTCGTCGTCGAAAGCGCTC.... 27 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................ATGTCGAACTAGAAGTGA.................................................................................................... 18 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CACAAAATGCCGTCGTCGTCGAAAGCGC...... 28 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................ATGCCGTCGTCGTCGAAAGC........ 20 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CACAAAATGCCGTCGTCGTCGAAAC......... 25 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AAATGCCGTCGTAGTCGAAAGCGC...... 24 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................AATGCCGTCGTCGTCGAAA.......... 19 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AAATGCCGTCGTCTTCGAAAGC........ 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CAAAATGCCGTCGTCGTCGAAAGC........ 24 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................TGCCGTCGTCGTCGAAAGCGCTCAC.. 25 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................TGCCGTCGTCGTCGAAAGCGCTC.... 23 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................AAAATGCCGTCGTCGTCGAAAGCGC...... 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCCGTCGTCGTCGAAAGCGCTCACA. 25 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AAATGCCGGCGTCGTCGAAAGCGC...... 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................ACCAGCCACAAAATGCCGTCGTCGTCGAA........... 29 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTCAACCAGCCACAAAATGCCGTCGTCG................ 28 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TTTCAACCAGCCACAAAATGCCGTCGTC................. 28 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................AACCAGCCACAAAATGCCGTCGTCGTC.............. 27 0 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................................GTCGTCGTCGAAAGCGCTC.... 19 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................TGCCGTCGTCGTCGAAAGCGC...... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GCCACAAAATGCCGTCGTCGTCGA............ 24 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................CAACCAGCCACAAAATGCCGTC.................... 22 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................................................ACAAAATGCCGTCGTCGTCGAA........... 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................ACCAGCCACAAAATGCCGTCGTCGTCGA............ 28 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................GATGCCGTCGTCGTCGAAAGCGC...... 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCAACCAGCCACAAAATGCCGTCGTCGT............... 28 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................GCCGTCGTCGTCGAAAGCG....... 19 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTCAACCAGCCACAAAATGCCGTCGTCGG............... 29 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTCAACCAGCCACAAAATGCCGTCGTCGTC.............. 30 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................ATGCCGTCGTCGTCGAAA.......... 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................ATGCCGTCGTCGTCGAAAGCGT...... 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AGCCACAAAATGCCGTCGTCGTTTT............ 25 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................AGCCACAAAATGCCGTCGTCGT............... 22 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTCAACCAGCCACAAAATGCCGTCGTCGTCGAA........... 33 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CCTTTTCAACCAGCCACAAAATGCCGT..................... 27 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AGCCACAAAATGCCGTCGTCGTCGAAA.......... 27 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................ACAAAATGCCGTCGTCGT............... 18 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TTTTCAACCAGCCACAAAATGCCGTCGTC................. 29 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................ATGCCGTCGTCGTCGAAAGCG....... 21 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................GCCACAAAATGCCGTCGTCGTCG............. 23 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
..........GAACAGGCGGCGATT.................................................................................................................................................................................................................... 15 1 20 0.20 4 0 0 0 0 4 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGCCGTCGTCGACGA............ 15 1 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0
.........................GGATTCAATCGTTAGACGT................................................................................................................................................................................................. 19 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CCGTGGTCGTCGAAAT......... 16 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................CTGCCGTGGTCGTCGAA........... 17 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................GAATTGATTGTTGAT............................................................................................ 15 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

GTCGCGGTACCTTGTTCGCCGCTAAAGTAAGTTGGCAATCTGCAGGCGGCCAATCAAAGCAAGCGTCTATTTCGGTGTATTGTTTTTTTATATATAAAATTTTGTGTATCTTTGCAATTTATAGCTTGTTCTTCACTAACAACTAACGATTTCACTTATAGGTGGGGAAGGAGAAAAAAAAAGAGTCAAGGAAAAGTTGGTCGGTGTTTTACGGCAGCAGCAGCTTTCGCGAGTGTG
*********************************************************************************..((......((((((((...(((........................................................))).)))))...)))......))***************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 GSM343915
embryo
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR902009
testis
 M024
male body
.................................................................TCTATTTCGGTGTATTGTTTTT...................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................AAAAAAAAAGAGTCATGGCAA........................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................AAAAAAAAGGAGTCATGGCAA........................................... 21 3 2 1.00 2 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAGAGTCATGGCAA........................................... 20 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GCTGTTTTACGGCAGCATCAG.............. 21 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................TGTTTTACGGCAGCAGCAGCT............ 21 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................AAAAAAAAAAAGTCAAGAAAAAG......................................... 23 2 5 0.20 1 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................AAAAAAAGGAGTCATGGCAA........................................... 20 3 12 0.17 2 2 0 0 0 0 0 0 0 0 0
....................GCTAAAGGAAGTTGGCAC....................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................AGGTGTGGAAGGAGA............................................................... 15 1 13 0.15 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................TAGGGGTGGAAGGAGGAAAAA.......................................................... 21 3 7 0.14 1 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................CCCAGCAGCTTTCGCGAG.... 18 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TTTTACAGCAGCAGCTCCTTT.......... 21 3 8 0.13 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................AGGAGAAAAAAAAAG...................................................... 15 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................TATACGTGGGGAAGGTGGAA............................................................. 20 3 11 0.09 1 0 0 0 1 0 0 0 0 0 0
...............TCGCTGCTAAAGTAAGGT............................................................................................................................................................................................................ 18 2 12 0.08 1 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................AAAAAAAGGGTCAAGGAAC........................................... 19 2 12 0.08 1 0 0 0 0 0 0 0 0 1 0
...............................................................................................................................................................AGGGGGGGGAGGAGAAAA............................................................ 18 2 17 0.06 1 0 1 0 0 0 0 0 0 0 0
..........................................CAGGGTGCCAATCTAAGC................................................................................................................................................................................. 18 3 17 0.06 1 0 0 0 0 0 0 0 0 0 1
..............................................................................................................................................................TAGGTGTGGAAGGAG................................................................ 15 1 18 0.06 1 0 0 0 0 0 0 1 0 0 0
.........................................GCAGGTGGCGAATCAA.................................................................................................................................................................................... 16 2 19 0.05 1 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................AAAAAAGGAGTCATGGCAAA.......................................... 20 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:12612063-12612299 + dsi_3673 CAGCGCCATGG-------------------AACAAGCG---GCGATTTCATTCAACCGTTAGACGTCCGCCGGTTAGT----T-------------------------------TCGTTCGCA----G----ATA----AAGCCACATAACA-AAAA-AAT----------------------ATATATTTTAAAACACAT---AGAA---A----CGTT------------------------AAATATCG---AACAA-G--------------AAGTGATT----GT-----TGATTGCTA-AAGTGAATAT--CCACCCCT-TCCTC-T--TTTTTTTTCTCAGTTCCTTTTCAACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------AGCGCTCACAC
droSec2 scaffold_21:1021509-1021744 + CAGCGCCATGG-------------------AACAAGCG---GCGATTTCATTCAACCGTTAGACGTCCGCCGGTTAGT----T-------------------------------TCGTTCGCT----A----ATA----AAGCCACATAACA-AAAA-AAA----------------------ATATATTTAAAAACACAT---AGAA---A----CGTT------------------------AAATATCG---AACAA-G--------------AAGTGATT----GT-----TGATTGCTA-AAGTGAATATCC-CACCCCC---TTC-TT-TATTTTTTCTCAGTTCCTTTTC-ACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------AGCGCTCACAC
dm3 chrX:13268087-13268323 + CAGCGCCATGG-------------------AACAAGCG---GCGATTTCATTCAACCGTTAGACGTCCGCCGGTTAGT----T-------------------------------TCGTTCGCT----G----AAA----AAGCCGCATAACA-AAAACA------------------------ATATATTTTAAAACACAT---TTAAAACA----CGTT------------------------ATATATCG---AACAA-G--------------AAGTGATT----GT-----TGATTGCTG-AAGTGAATAT--CCATCCCC---TTC-T--TTTTTTTTCTCAGTTCCTTTTCAACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------AGCGCTCACAC
droEre2 scaffold_4690:13601513-13601732 - AAGCGCCACGA-------------------ATCAAGCG---GCGATTTCATTCAACCGTTAGACGTCCGCCGGTTAGT----T-------------------------------TCGTTCGCT----GAATGATA----AAG-------------------------------------------ATATACTAAAACACAT---CGAA---A----CGTTAATATTAATAT-------------------AC---AACAC-A--------------AAGTGAAT----GC-----TGATTGCT--AAGTGAATAC--CCGC-------CTT-T--TTTTTTTTCTCAGTTCCTTTTCAACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------AGCGCTCACAC
droYak3 X:7548495-7548726 + CAGCGCCACGG-------------------CACAAGCG---GCGATTTCATTCAACCGTTAGACGTCCGCCGGTTAGT----T-------------------------------TCGTTCGCT----G----AAAA---AAG-----------------AACGTTAT--TAAAAACG--AACAAAAAAACAAAAAAC--------------------ATTAATATTAATAT-------T---C----------------------------------AGTGTTT----ACC----CGATTGCC--AAGTGAATAT--CAACGCCG-TTTTTTTTTGTTTGTTTCTCAGTTCCTTCTCAACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------AGCGCTCACAC
droEug1 scf7180000408958:337139-337360 - CAGCGTCACGG-------------------AAAAAGCG---GCGATTTCATTCAACCGTTAGACGTCCGCCGGTTAGT----T-------------------------------TCGCTCGCA----A----AAT----AAG------TGCACAA----------------------------AGATAT-TAAGAA--TAT---T--------------TAC----------------------AAATATCAACCAACAA-GAAAGAAATAATCCAAAGTGC--TGAT--AAAAT-----------TGTGATTT--TC----------TTT-G--TTTTTTTTCTCAGTTCCTTTTCAACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------AGCCCTCCAAT
droBia1 scf7180000298389:1243044-1243272 + CAGCGTCACGG-------------------AAAAGGCG---GCGATTTCATTCAACCGTTAGACGTCCGCCGGTTAGT----T-------------------------------TCGCTCGCC----GGGTGAAA----AAGACG--GTGGA-AAAGCGAT----------------------ATAAAGCTAATAGC--------------------CCTT--------ATACGACACCGAATAGTGTTCCG---CAA------------------AAGT--------GT-----TGATTA--A-ACGTGAATT--TC-GC-------C-C-C--TTTTTCTCCCCAGTTCGTTCTCAACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------AGCGCTGCAGA
droTak1 scf7180000414740:69234-69465 + CAGCGTCACGG-------------------AAAAAGCA---ACGATTTCATTCAACCGTTAGACGTCCGCCGGTTAGT----TT----------------------------CTTCGCTCGCACGACG----AAAAAAGAAGAGA--GTGAA-AA----------------------------AGATATCTAAAAACATAT---C--------------TCCAAAAAATAT-------C---CAAAATATCG---CCA------------------AAGTGT--TTAT--A--------------AAGTGAATT--TCTGT----A--TAT-T--TTTTTCCCCTCAGTTCGTTTTCAACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------AGCGCTACAAT
droEle1 scf7180000491001:1748499-1748554 - CAGCGACACGG-------------------CAAAAGCG---GCAATTTCATTCAACCGTTAGAAGTCCGCCGGTTAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779333:1069286-1069477 + CAGCGACACGG-------------------TCAAAGCG---GCGATTTCATTCAACCGTTAGACGCCCGCCGGTTAGT----T-------------------------------TCGCTCGCT----A----AAA----AA---A--GTGAA-A--------AA---------------------ATATTTGAAACAACAT-------------CT-----------------GACAATAAAC----------------------------------AGTGT--TTAA--A---T-----------TGTGAATC--C------------------GATTTTTTTTCAGTTCGTTCTCAACC------AGCCACAAAATGCCGACGTCCTCGAA------------------ATCACTGAAAC
droFic1 scf7180000454050:1266357-1266550 + CAGCGATACGG-------------------CAAAAGCG---GCGATTTCATTCAACCGTTAGACGCCCGCCGGTTAGT----T-------------------------------TCGCTCGCT----A----AAG----AAGATA--GTGAA-A--------AAAAAATAAAT-------------------------------GGAA---TATCT-----------------------------------G---AAC---G--------------AAGTGC--TTAT--A---T-----------TGTGAATG--CCTAC-----------C----TTTTTTTCTAGTTCCTTCTCAACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------ATCGCTGCAGT
droKik1 scf7180000302696:845470-845642 - CAGCGGC------------------------CAAAGCGGCAGCGCCGCCATTCAACCGTTAGACGTCCATCGGTAAGC----T--------------------------------CGCGAGTG----A----ATG----AATTTA--G---------------------TAAAAACTTAAGCTAAG---------------AAA---------------------------------------------------------G-----------------------------------------------AAACT--CC-TC---TTGCC---A--CTTTCCGTCACAGTTCGTTCTCCACC------AGCCACAGAATGCCGTCGTCCGAGAA------------------ATCGCTGTCCT
droAna3 scaffold_13335:870362-870417 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAGATCAATCGCCACC------AGCCCCAAGATGCCGTCGAACGATAA------------------ATCCCTCAACC
droBip1 scf7180000396006:126065-126120 - TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGATCAATCGCCACC------AGCCCCAAGATGCCGTCGAACGATAA------------------ATCCCTCAATC
dp5 XL_group1a:5986453-5986651 - CACCGCAGCCGCATTCAATCCGAAGCTTTT------GG---GGGTAGACATTC-ACCGTTTGACGCCCGTCGGTTAGT----TG----------------------------TCCCTCTTCTT----G----TTT----GGGCCGTGTCTGA-GAAGTGAAATACAATTTAATAACA------------------------AAA------------------------------------------------------------------------------------------G-----------TGAGAACT--CC-TC-------CAC-C--TTCCGCTCCATAGTTCGTTCTCAACC------AGCACCAAGATGCCA------GCGAA------------------ATGTCTGCAAC
droPer2 scaffold_8952:591-789 - dpe_2135 CATCGCAGCCGCATTCAATCCGAAGCTTTT------GG---GGGTAGACATTC-ACCGTTTGACGCCCGTCGGTTAGT----TG----------------------------TCCCTCTTGTT----G----TTT----GGGCCGTGTCTGA-GAAGTGAAATACATTTTAATAACG------------------------AAA------------------------------------------------------------------------------------------G-----------TGAGAACT--CC-TC-------CAC-C--TTCCGCTCCATAGTTCGTTCTCAACC------AGCACCAAGATGCCA------GCGAA------------------ATGTCTGCAAC
droWil2 scf2_1100000004963:1379121-1379151 + A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACACAATG------TCTTCAAA------------------ATGCCTGCAAT
droVir3 scaffold_12932:512584-512654 + CGTCGCAG------TCAAGCTGAAGCATTGAACGCGCG---TGGTAGCCATTC-ACCGTTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGTTA------------------GT---------
droMoj3 scaffold_6473:1028415-1028488 - CGACGCTGCAG---TCAAGCTGAAGCATTGAACGCGCG---TGGTAGCCATTC-ACCGTTTAACGCTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTCGGTT------AGT----------------------------------------------------
droGri2 scaffold_14853:261680-261961 + CGCCGCAGT------CAAGCTGAAACATTGAACGCGCG---TGGTAGCCATTC-ACCGTTCGACGCTCCTTC-TCGGTTAGTAGAAACCCACTTCCCCTCCTTGCGTTCGTTCTTCGCTTGCT----G----TT-------------TTGCA-AA---------------------------------ATTTAACATTCGT---GCGT---G----CTTT------------------------GCATTTCC---TGTTAATA------------ACAGTGT--TTTT--A---GTGTTTGGCTAAACTACATT---TTGT----T--TTT-C--TTGTTTTTTTCTGTTCTTTTTTTGTTTTTGTTTACAGCTGTATG------TCGACGAAAAGCCAAAACAACATGAAATTCGTTACGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAGCGCCATGG-------------------AACAAGCG---GCGATTTCATTCAACCGTTAGACGTCCGCCGGTTAGT----T-------------------------------TCGTTCGCA----G----ATA----AAGCCACATAACA-AAAA-AAT----------------------ATATATTTTAAAACACAT---AGAA---A----CGTT------------------------AAATATCG---AACAA-G--------------AAGTGATT----GT-----TGATTGCTA-AAGTGAATAT--CCACCCCT-TCCTC-T--TTTTTTTTCTCAGTTCCTTTTCAACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------AGCGCTCACACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGA..............................18310.3331225300000000100000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AGCGC......2434.001208400000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AATGCCGTCGTCGTCGAA------------------...........1831.67520300000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGTCGTCGAA------------------AGCGCTCACA.2631.67500000011210000000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AGCGCTC....2631.33413000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AGC........2231.33403100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AGCG.......2331.33404000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTCAACC------AGCCACAAAATGCCGTCGTC...................................2731.33400000011200000000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------...........1931.33402200000000000000
.......................................................................................................................................................................................................................................................................................TGATT----GT-----TGATTGCTA-AAGTGA...............................................................................................................2211.00100001000000000000
..............................................................ACGTCCGCCGGTTAGT----T-------------------------------TCG.................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTCAACC------AGCCACAAAATGCCGTCGT....................................2631.00300020001000000000
........................................................CGTTAGACGTCCGCCGG.............................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................TCAACC------AGCCACAAAATGCCGTCGTCGTC................................2931.00300000030000000000
...........................................................................AGT----T-------------------------------TCGTTCGCA----G----ATA----AAG........................................................................................................................................................................................................................................................................................2011.00110000000000000000
...........................................................................AGT----T-------------------------------TCGTTCGCA----G----ATA----A..........................................................................................................................................................................................................................................................................................1811.00110000000000000000
........................................................CGTTAGACGTCCGCCGGTT...........................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
.........................................................GTTAGACGTCCGCCGGT............................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
...................................................................................................................................................................................................................................................................A-G--------------AAGTGATT----GT-----TGATTGCC.......................................................................................................................2011.00110000000000000000
........................................................................................................................................................................................................................................................ATCG---AACAA-G--------------AAGTGATT----GT-----T..............................................................................................................................2111.00100000000001000000
.............................................................................T----T-------------------------------TCGTTCGCA----G----ATA----AAGCCAC....................................................................................................................................................................................................................................................................................2211.00100001000000000000
..................................................................................T-------------------------------TCGTTCGCA----G----ATA----AAGCCA.....................................................................................................................................................................................................................................................................................2011.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................CACAAAATGCCGTCGTCGTCGA..............................2231.00300100011000000000
...........................................GATTTCATTCAACCGTTAGACGT....................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGG..............................1841.00402200000000000000
............................................ATTTCATTCAACCGTTAGACGT....................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TCAACC------AGCCACAAAATGCCGTCGTCG..................................2731.00300000000020010000
..................................................................................................................................................................................................................................................................................................................................................................TTCAACC------AGCCACAAAATGCCGTCGTCGT.................................2931.00300000020100000000
.....................................................................................................................................................................................................................................................................................................................................................................AACC------AGCCACAAAATGCCGTCGTCGT.................................2630.67200000000000020000
..................................................................................................................................................................................................................................................................................................................................................................TTCAACC------AGCCACAAAATGCCGTCGTCGTCGA..............................3230.67200000011000000000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AGCGCT.....2530.67211000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................CACAAAATGCCGTCGTCGTCGAA------------------AGCGCT.....2930.67200000010100000000
.............................................................................................................................................................................................................................................................................................................................................................TCCTTTTCAACC------AGCCACAAAATGCCGT.......................................2830.67200000002000000000
..................................................................................................................................................................................................................................................................................................................................................................................CACAAAATGCCGTCGTCGTCGAA------------------A..........2430.67200000002000000000
..................................................................................................................................................................................................................................................................................................................................................................................CACAAAATGCCGTCGTCGTCGAA------------------AGC........2630.67201000000100000000
................................................................................................................................................................................................................................................................................................................................................................TTTTCAACC------AGCCACAAAATGCCGTCGT....................................2830.67200000011000000000
...............................................................................................................................................................................................................................................................................................................................................................................AGCCACAAAATGCCGTCGTCGTCGA..............................2530.67201000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................AGCCACAAAATGCCGTCGTCGTCGAA------------------...........2630.67200000001100000000
...................................................................................................................................................................................................................................................................................................................................................................................ACAAAATGCCGTCGTCGTCGA..............................2130.67200000010000010000
.........................................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGTCGTCGAA------------------AGCGCTCACAC2730.67200000000011000000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AG.........2130.67200200000000000000
.....................................................................................................................................................................................................................................................................................AGTGATT----GT-----TGATTGCT.......................................................................................................................1750.60300000000102000000
.................................................ATTCAACCGTTAGACGTCCGC................................................................................................................................................................................................................................................................................................................................................................2120.50100000000001000000
...................................................TCAACCGTTAGACGTCCGCC...............................................................................................................................................................................................................................................................................................................................................................2020.50100000000001000000
.......................................................CCGTTAGACGTCCGCCG..............................................................................................................................................................................................................................................................................................................................................................1720.50100000010000000000
................................................CATTCAACCGTTAGACGTCCGC................................................................................................................................................................................................................................................................................................................................................................2220.50100000000001000000
....................................................CAACCGTTAGACGTCCGCC...............................................................................................................................................................................................................................................................................................................................................................1920.50100100000000000000
.....................................................AACCGTTAGACGTCCGCCG..............................................................................................................................................................................................................................................................................................................................................................1920.50110000000000000000
.........................................................................................................................................................................................................................................................TCG---AACAA-G--------------AAGTGATT----T.....................................................................................................................................1820.50100000001000000000
.................................................ATTCAACCGTTAGACGTC...................................................................................................................................................................................................................................................................................................................................................................1820.50110000000000000000
......................................................................................................................................................................................................................................................................................GTGATT----GT-----TGATTGCT.......................................................................................................................1650.40200000000002000000
.....................................................................................................................................................................................................................................................................................................................................................................................AAAATGCCGTCGTCGTCGAA------------------AGCGCTC....2730.33100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................CACAAAATGCCGTCGTCGTCGAA------------------AGCGC......2830.33100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................ATGCCGTCGTCGTCGAA------------------AGC........2030.33110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................CACAAAATGCCGTCGTCGTCGAA------------------AC.........2530.33100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AATGCCGTCGTCGTCGAA------------------A..........1930.33100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CAAAATGCCGTCGTCGTCGAA------------------AGC........2430.33100000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGTCGTCGAA------------------AGCGCTCAC..2530.33100000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGTCGTCGAA------------------AGCGCTC....2330.33100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................AAAATGCCGTCGTCGTCGAA------------------AGCGC......2530.33100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GCCGTCGTCGTCGAA------------------AGCGCTCACA.2530.33100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................ACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------...........2930.33100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTCAACC------AGCCACAAAATGCCGTCGTCG..................................2830.33100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................TTTCAACC------AGCCACAAAATGCCGTCGTC...................................2830.33100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................AACC------AGCCACAAAATGCCGTCGTCGTC................................2730.33100000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................................GTCGTCGTCGAA------------------AGCGCTC....1930.33100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGTCGTCGAA------------------AGCGC......2130.33101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................GCCACAAAATGCCGTCGTCGTCGA..............................2430.33100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................CAACC------AGCCACAAAATGCCGTC......................................2230.33100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................ACAAAATGCCGTCGTCGTCGAA------------------...........2230.33101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ACC------AGCCACAAAATGCCGTCGTCGTCGA..............................2830.33100000000100000000
...................................................................................................................................................................................................................................................................................................................................................................TCAACC------AGCCACAAAATGCCGTCGTCGT.................................2830.33100000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................GCCGTCGTCGTCGAA------------------AGCG.......1930.33110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTCAACC------AGCCACAAAATGCCGTCGTCGG.................................2930.33100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTCAACC------AGCCACAAAATGCCGTCGTCGTC................................3030.33100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................ATGCCGTCGTCGTCGAA------------------A..........1830.33101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................ATGCCGTCGTCGTCGAA------------------AGCGT......2230.33101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................AGCCACAAAATGCCGTCGTCGTTTT..............................2530.33100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................AGCCACAAAATGCCGTCGTCGT.................................2230.33100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTCAACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------...........3330.33100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................CCTTTTCAACC------AGCCACAAAATGCCGT.......................................2730.33100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................AGCCACAAAATGCCGTCGTCGTCGAA------------------A..........2730.33100000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................ACAAAATGCCGTCGTCGT.................................1830.33100100000000000000
................................................................................................................................................................................................................................................................................................................................................................TTTTCAACC------AGCCACAAAATGCCGTCGTC...................................2930.33100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................ATGCCGTCGTCGTCGAA------------------AGCG.......2130.33100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................GCCACAAAATGCCGTCGTCGTCG...............................2330.33100000001000000000
droSec2
CAGCGCCATGG-------------------AACAAGCG---GCGATTTCATTCAACCGTTAGACGTCCGCCGGTTAGT----T-------------------------------TCGTTCGCT----A----ATA----AAGCCACATAACA-AAAA-AAA----------------------ATATATTTAAAAACACAT---AGAA---A----CGTT------------------------AAATATCG---AACAA-G--------------AAGTGATT----GT-----TGATTGCTA-AAGTGAATATCC-CACCCCC---TTC-TT-TATTTTTTCTCAGTTCCTTTTC-ACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------AGCGCTCACACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGA..............................18120.002000191
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AGCGC......2417.0070331
.................................................ATTCAACCGTTAGACGTCCG.................................................................................................................................................................................................................................................................................................................................................................2012.0022000
.....................................................................................................................................................................................................................................................................................................................................................................................AAAATGCCGTCGTCGTCGAA------------------AGC........2312.0020200
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AG.........2112.0020110
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AGCG.......2312.0020020
...........................................GATTTCATTCAACCGTTAGACGTCCG.................................................................................................................................................................................................................................................................................................................................................................2611.0011000
................................................CATTCAACCGTTAGACGTCCGCC...............................................................................................................................................................................................................................................................................................................................................................2311.0010010
.........................................................................................................................................................................................................................................................................................ATT----GT-----TGATTGCTA-AAGTGA...............................................................................................................2011.0010010
.........................................................................................................................................................................................................................GTT------------------------AAATATCG---AACAA-G--------------AAGTGATT----G.....................................................................................................................................2611.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................AATGCCGTCGTCGTCGAA------------------AGCG.......2211.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................AATGCCGTCGTCGTCGAA------------------AGCGCTCACA.2811.0010100
........................................................CGTTAGACGTCCGCCGGT............................................................................................................................................................................................................................................................................................................................................................1811.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGTCGTCGAA------------------AGCGC......2111.0010001
...................................................................................................................................................................................................................................................................................................................................................................................ACAAAATGCCGTCGTCGTCGAA------------------...........2211.0010100
........................................................CGTTAGACGTCCGCCGGTTAGT----....................................................................................................................................................................................................................................................................................................................................................2211.0011000
...................................................................................................................................................................................................................................................................................................................................................................................ACAAAATGCCGTCGTCGTCGAA------------------AG.........2411.0010010
...............................................................................................................................................................................................................................................................................................................................................................................AGCCACAAAATGCCGTCGTCGTC................................2311.0010100
.................................................ATTCAACCGTTAGACGTC...................................................................................................................................................................................................................................................................................................................................................................1811.0010010
dm3
CAGCGCCATGG-------------------AACAAGCG---GCGATTTCATTCAACCGTTAGACGTCCGCCGGTTAGT----T-------------------------------TCGTTCGCT----G----AAA----AAGCCGCATAACA-AAAACA------------------------ATATATTTTAAAACACAT---TTAAAACA----CGTT------------------------ATATATCG---AACAA-G--------------AAGTGATT----GT-----TGATTGCTG-AAGTGAATAT--CCATCCCC---TTC-T--TTTTTTTTCTCAGTTCCTTTTCAACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------AGCGCTCACACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGA..............................18142.00420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010300000000000000000000000002300000000000000004700000000002000000000000000000000000000000000000000100010010200700000000000000000000301000000
.....................................................AACCGTTAGACGTCCGCCGG.............................................................................................................................................................................................................................................................................................................................................................20114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000010010101010000000000000000
..........................................................................................................................................................................................................................................................................................TT----GT-----TGATTGCTG-AAGTGAAT.............................................................................................................21113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000100000000000000000000000000000000000000000000000000000000200040000000000000000101000000010000000000000000000000000
.....................................................AACCGTTAGACGTCCGCCGGT............................................................................................................................................................................................................................................................................................................................................................21113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000010000000001000000000000000000010000000000000000000000000000000000100300000000001000001010000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................AAAATGCCGTCGTCGTCGAA------------------AGCGCTC....27112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000007301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................................................................................................................................................................................................................................................................................................................................................................................AATGCCGTCGTCGTCGAA------------------AGCATC.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ACC------AGCCACAAAATGCCGTCG.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................TTCAACCGTTAGACGTCCGCC...............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................GCCACAAAATGCCGTCGTCGTCGA..............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CAAAATGCCGTCGTCGTCGAA------------------A..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................GATT----GT-----TGATTGCTG-AAGTGAATAT--.........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.......................................................................................................................................................................................................................................................................................TGATT----GT-----TGATTGCTG-AAGTGAAA.............................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................TTCATTCAACCGTTAGACGTCCGCCG..............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................T-----TGATTGCTG-AAGTGAATAT--CC.......................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................................................................GCCGGTTAGT----T-------------------------------TCGTTCG.............................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................AACC------AGCCACAAAATGCCGTCG.....................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................CCGGTTAGT----T-------------------------------TCGTTCGCT----G----AAA----AAGC.......................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTCAACCGTTAGACGTCCGCCG..............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AACAAGCG---GCGATTTCATTCA................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................AAAATGCCGTCGTCGTCGAA------------------AGCGC......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GCCGTCGTCGTCGAA------------------AGCGCTC....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GATTGCTG-AAGTGAATAT--CC.......................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................GACGTCCGCCGGTTAGT----T-------------------------------TCG.................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCG...............................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................GTTAGT----T-------------------------------TCGTTCGCT----G----AAA----AAGC.......................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
........................................................CGTTAGACGTCCGCCGGTTAGT----T-------------------------------TCG.................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................GTCGTCGTCGAA------------------AGCGCTCAC..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................TCCGCCGGTTAGT----T-------------------------------TCGTTCG.............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
............................................................AGACGTCCGCCGGTTAGT----T-------------------------------TCGTTCG.............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
............................................................AGACGTCCGCCGGTTAGT----T-------------------------------TCGT................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.........................................................................................................................................................................................................................................................................................................ATTGCTG-AAGTGAATAT--CCAT.....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TTAGACGTCCGCCGGTTAGT----T-------------------------------TCGTT...............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................GTTAGT----T-------------------------------TCGTTCGCT----G----AAA----A..........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AGTTCCTTTTCAACC------AGCCACA................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................A-G--------------AAGTGATT----GT-----TGATTGCTG-AAGTG................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GTGATT----GT-----TGATTGCTG-AAGTGA...............................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................................................GACGTCCGCCGGTTAGT----T-------------------------------TC..................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TGCTG-AAGTGAATAT--CCATCCC..................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................................................................................................................................................................................................................CC------AGCCACAAAATGCCGTCGTCGTCGA..............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................CGTCCGCCGGTTAGT----T-------------------------------TCG.................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
......CATGG-------------------AACAAGCG---GCGATTTC.....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AGCGCTCAC..2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AATGCCGTCGTCGTCGAA------------------AGCG.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CATTCAACCGTTAGACGTC...................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................ATATATCG---AACAA-G--------------AAGTGATT----......................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................CGTCGTCGTCGAA------------------AGCGCTCA...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CAAAATGCCGTCGTCGTCGAA------------------AGC........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CATTCAACCGTTAGACGTCCGC................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................G--------------AAGTGATT----GT-----TGATTGCTG-A....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................GTTCCTTTTCAACC------AGCCAC.................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................ATCG---AACAA-G--------------AAGTGATT----......................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................ACAAAATGCCGTCGTCGTCG...............................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GACGTCCGCCGGTTAGT----T-------------------------------T...................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................AACC------AGCCACAAAATGCCGTCGTC...................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AAGCGCCACGA-------------------ATCAAGCG---GCGATTTCATTCAACCGTTAGACGTCCGCCGGTTAGT----T-------------------------------TCGTTCGCT----GAATGATA----AAG-------------------------------------------ATATACTAAAACACAT---CGAA---A----CGTTAATATTAATAT-------------------AC---AACAC-A--------------AAGTGAAT----GC-----TGATTGCT--AAGTGAATAC--CCGC-------CTT-T--TTTTTTTTCTCAGTTCCTTTTCAACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------AGCGCTCACACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGA..............................18112.00121001190
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AGCGC......2413.0030000300
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AGC........2212.0020000110
...................................................................................................................................................................................................................................................................................................................................................................TCAACC------AGCCACAAAATGCCGTCGTCGT.................................2812.0022000000
...............................................................................................................................................................................................................................................................................................................................................................................AGCCACAAAATGCCGTCGTCGTC................................2311.0010000010
.....................................................................................................................................................................................................................................................................................AGTGAAT----GC-----TGATTGCT--AAGTGA...............................................................................................................2311.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................CAAAATGCCGTCGTCGTCGAA------------------AGCGC......2611.0010001000
.........................................................GTTAGACGTCCGCCGGTT...........................................................................................................................................................................................................................................................................................................................................................1811.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................ATGCCGTCGTCGTCGAA------------------AGCGC......2211.0010001000
.................................................................................................................................................................................................................................................................................................................................................................TTTCAACC------AGCCACAAAATGCCGTC......................................2511.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AGCGCTCA...2711.0010000010
..............................ATCAAGCG---GCGATTTCATTCAACC.............................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
....................................................CAACCGTTAGACGTCCGCCG..............................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................GTCGTCGTCGAA------------------AGCGCT.....1811.0010000010
.....................................................AACCGTTAGACGTCCGCC...............................................................................................................................................................................................................................................................................................................................................................1811.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AGCG.......2311.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AGCGCT.....2511.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AGCGCTCC...2711.0010000100
................................................CATTCAACCGTTAGACGTCCGCC...............................................................................................................................................................................................................................................................................................................................................................2311.0010000100
....................................................CAACCGTTAGACGTCCGCCGG.............................................................................................................................................................................................................................................................................................................................................................2111.0010001000
...........................................GATTTCATTCAACCGTTAGA.......................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................AATGCCGTCGTCGTCGAA------------------AGCGCTC....2511.0011000000
droYak3
CAGCGCCACGG-------------------CACAAGCG---GCGATTTCATTCAACCGTTAGACGTCCGCCGGTTAGT----T-------------------------------TCGTTCGCT----G----AAAA---AAG-----------------AACGTTAT--TAAAAACG--AACAAAAAAACAAAAAAC--------------------ATTAATATTAATAT-------T---C----------------------------------AGTGTTT----ACC----CGATTGCC--AAGTGAATAT--CAACGCCG-TTTTTTTTTGTTTGTTTCTCAGTTCCTTCTCAACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------AGCGCTCACACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AGCGC......2414.00400100030000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGA..............................1813.00330000000000
................................................................GTCCGCCGGTTAGT----T-------------------------------TCGTTCGCT----G----AAAA---...........................................................................................................................................................................................................................................................................................2912.00220000000000
....................................................................................................................................................................................................................................................................................................................................................................CAACC------AGCCACAAAATGCCGTC......................................2212.00200100010000
...................................................................................................................................................................................................................................................................................................................................................................................ACAAAATGCCGTCGTCGTCGA..............................2112.00220000000000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AG.........2111.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................CTTCTCAACC------AGCCACAAAATGCC.........................................2411.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................GTTCCTTCTCAACC------AGCC...................................................1811.00100100000000
.........................................................................................................................................................................................................................................................................................................................AT--CAACGCCG-TTTTTTTTTGT.....................................................................................2111.00100010000000
.................................................ATTCAACCGTTAGACGTCC..................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
...................................................................................................................................................................................................................................................................................................................................................................................ACAAAATGCCGTCGTCGTCGAA------------------...........2211.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................AATGCCGTCGTCGTCGAA------------------AGCGC......2311.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AGCG.......2311.00100000010000
.............................................TTTCATTCAACCGTTAGACGTCCGCC...............................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
.............................................................GACGTCCGCCGGTTAGT----T-------------------------------TC..................................................................................................................................................................................................................................................................................................................2011.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------...........1911.00100000010000
.AGCGCCACGG-------------------CACAAGCG---GC...........................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.........................................................GTTAGACGTCCGCCGGTTT..........................................................................................................................................................................................................................................................................................................................................................1911.00100001000000
.............................................................GACGTCCGCCGGTTAGT----T-------------------------------TCGC................................................................................................................................................................................................................................................................................................................2211.00110000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GCCGTCGTCGTCGAA------------------AGCGC......2011.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGAA------------------AGC........2211.00100000010000
...........................................................TAGACGTCCGCCGGTTAGT----....................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
....................................................................................................................................................................................................................................................................................................................................................................CAACC------AGCCACAAAATGCCGT.......................................2111.00100000010000
.................................................ATTCAACCGTTAGACGTCCGCC...............................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..........................................................TTAGACGTCCGCCGGTTAG.........................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
.............................................................GACGTCCGCCGGTTAGT----T-------------------------------TCGG................................................................................................................................................................................................................................................................................................................2211.00110000000000
.....................................................................................................................................................................................................................................................................................................................................................................................AAAATGCCGTCGTCGTCGAA------------------...........2011.00110000000000
.....................................................AACCGTTAGACGTCCGCCGG.............................................................................................................................................................................................................................................................................................................................................................2011.00100001000000
.........................................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGTCGTCGAA------------------AGCGCTCACA.2611.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................AAATGCCGTCGTCGTCGG..............................1820.50110000000000
...................................................................................................................................................................................................................................................................................................................................................................................ACAAAATGCCGTCGTCGTCGG..............................2120.50110000000000
droEug1
CAGCGTCACGG-------------------AAAAAGCG---GCGATTTCATTCAACCGTTAGACGTCCGCCGGTTAGT----T-------------------------------TCGCTCGCA----A----AAT----AAG------TGCACAA----------------------------AGATAT-TAAGAA--TAT---T--------------TAC----------------------AAATATCAACCAACAA-GAAAGAAATAATCCAAAGTGC--TGAT--AAAAT-----------TGTGATTT--TC----------TTT-G--TTTTTTTTCTCAGTTCCTTTTCAACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------AGCCCTCCAATSizeHit CountTotal NormTotal
No Reads
droBia1
CAGCGTCACGG-------------------AAAAGGCG---GCGATTTCATTCAACCGTTAGACGTCCGCCGGTTAGT----T-------------------------------TCGCTCGCC----GGGTGAAA----AAGACG--GTGGA-AAAGCGAT----------------------ATAAAGCTAATAGC--------------------CCTT--------ATACGACACCGAATAGTGTTCCG---CAA------------------AAGT--------GT-----TGATTA--A-ACGTGAATT--TC-GC-------C-C-C--TTTTTCTCCCCAGTTCGTTCTCAACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------AGCGCTGCAGASizeHit CountTotal NormTotal
No Reads
droTak1
CAGCGTCACGG-------------------AAAAAGCA---ACGATTTCATTCAACCGTTAGACGTCCGCCGGTTAGT----TT----------------------------CTTCGCTCGCACGACG----AAAAAAGAAGAGA--GTGAA-AA----------------------------AGATATCTAAAAACATAT---C--------------TCCAAAAAATAT-------C---CAAAATATCG---CCA------------------AAGTGT--TTAT--A--------------AAGTGAATT--TCTGT----A--TAT-T--TTTTTCCCCTCAGTTCGTTTTCAACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------AGCGCTACAATSizeHit CountTotal NormTotal
No Reads
droEle1
CAGCGACACGG-------------------CAAAAGCG---GCAATTTCATTCAACCGTTAGAAGTCCGCCGGTTAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CAGCGACACGG-------------------TCAAAGCG---GCGATTTCATTCAACCGTTAGACGCCCGCCGGTTAGT----T-------------------------------TCGCTCGCT----A----AAA----AA---A--GTGAA-A--------AA---------------------ATATTTGAAACAACAT-------------CT-----------------GACAATAAAC----------------------------------AGTGT--TTAA--A---T-----------TGTGAATC--C------------------GATTTTTTTTCAGTTCGTTCTCAACC------AGCCACAAAATGCCGACGTCCTCGAA------------------ATCACTGAAACSizeHit CountTotal NormTotal
No Reads
droFic1
CAGCGATACGG-------------------CAAAAGCG---GCGATTTCATTCAACCGTTAGACGCCCGCCGGTTAGT----T-------------------------------TCGCTCGCT----A----AAG----AAGATA--GTGAA-A--------AAAAAATAAAT-------------------------------GGAA---TATCT-----------------------------------G---AAC---G--------------AAGTGC--TTAT--A---T-----------TGTGAATG--CCTAC-----------C----TTTTTTTCTAGTTCCTTCTCAACC------AGCCACAAAATGCCGTCGTCGTCGAA------------------ATCGCTGCAGTSizeHit CountTotal NormTotal
No Reads
droKik1
CAGCGGC------------------------CAAAGCGGCAGCGCCGCCATTCAACCGTTAGACGTCCATCGGTAAGC----T--------------------------------CGCGAGTG----A----ATG----AATTTA--G---------------------TAAAAACTTAAGCTAAG---------------AAA---------------------------------------------------------G-----------------------------------------------AAACT--CC-TC---TTGCC---A--CTTTCCGTCACAGTTCGTTCTCCACC------AGCCACAGAATGCCGTCGTCCGAGAA------------------ATCGCTGTCCTSizeHit CountTotal NormTotal
No Reads
droAna3
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAGATCAATCGCCACC------AGCCCCAAGATGCCGTCGAACGATAA------------------ATCCCTCAACCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................CACC------AGCCCCAAGATGCCGTC......................................2112.002110000
....................................................................................................................................................................................................................................................................................................................................................................CCACC------AGCCCCAAGATGCCGTC......................................2212.002010010
.........................................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGAACGATAA------------------ATCCCT.....2212.002100001
................................................................................................................................................................................................................................................................................................................................................................................................GAACGATAA------------------ATCCCTCAACC2012.002020000
................................................................................................................................................................................................................................................................................................................................................................................GCCCCAAGATGCCGTCGAACG.................................2112.002110000
..........................................................................................................................................................................................................................................................................................................................................................................................GCCGTCGAACGATAA------------------ATC........1811.001010000
..............................................................................................................................................................................................................................................................................................................................................................CAATCGCCACC------AGCCCCAAGATGCCGTCG.....................................2911.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................GTCGAACGATAA------------------ATCCCTCAAC.2211.001010000
..................................................................................................................................................................................................................................................................................................................................................................CGCCACC------AGCCCCAAGATGCC.........................................2111.001010000
................................................................................................................................................................................................................................................................................................................................................................................GCCCCAAGATGCCGTCGAAC..................................2011.001010000
........................................................................................................................................................................................................................................................................................................................................................................C------AGCCCCAAGATGCCGTCGAACGAT...............................2511.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................AACGATAA------------------ATCCCTCAACC1911.001010000
..............................................................................................................................................................................................................................................................................................................................................................CAATCGCCACC------AGCCCCAAGATGCCGTC......................................2811.001000010
...............................................................................................................................................................................................................................................................................................................................................................AATCGCCACC------AGCCCCAAGATGCC.........................................2411.001100000
...............................................................................................................................................................................................................................................................................................................................................................................AGCCCCAAGATGCCGTCGAAC..................................2111.001010000
..................................................................................................................................................................................................................................................................................................................................................................CGCCACC------AGCCCCAAGATGCCGTC......................................2411.001100000
....................................................................................................................................................................................................................................................................................................................................................................CCACC------AGCCCCAAGATGCCGTCGAACG.................................2711.001000010
....................................................................................................................................................................................................................................................................................................................................................................................CAAGATGCCGTCGAACGATAA------------------A..........2211.001000001
...................................................................................................................................................................................................................................................................................................................................................................................CCAAGATGCCGTCGAACGATAA------------------AT.........2411.001000010
.................................................................................................................................................................................................................................................................................................................................................................................CCCCAAGATGCCGTCGAAC..................................1911.001010000
..............................................................................................................................................................................................................................................................................................................................................................CAATCGCCACC------AGCCCCAAGATGC..........................................2411.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................GCCGTCGAACGATAA------------------ATCCCTC....2211.001100000
...................................................................................................................................................................................................................................................................................................................................................................GCCACC------AGCCCCAAGATGCCGTCGAAC..................................2711.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................GATGCCGTCGAACGATAA------------------ATCCCT.....2411.001010000
...................................................................................................................................................................................................................................................................................................................................................................GCCACC------AGCCCCAAGATGCCGTCGAA...................................2611.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGAACGATAA------------------ATCCCTCAAC.2611.001001000
................................................................................................................................................................................................................................................................................................................................................................ATCGCCACC------AGCCCCAAGATGCCGTC......................................2611.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................GTCGAACGATAA------------------ATCCCC.....1811.001010000
droBip1
TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGATCAATCGCCACC------AGCCCCAAGATGCCGTCGAACGATAA------------------ATCCCTCAATCSizeHit CountTotal NormTotal
No Reads
dp5
CACCGCAGCCGCATTCAATCCGAAGCTTTT------GG---GGGTAGACATTC-ACCGTTTGACGCCCGTCGGTTAGT----TG----------------------------TCCCTCTTCTT----G----TTT----GGGCCGTGTCTGA-GAAGTGAAATACAATTTAATAACA------------------------AAA------------------------------------------------------------------------------------------G-----------TGAGAACT--CC-TC-------CAC-C--TTCCGCTCCATAGTTCGTTCTCAACC------AGCACCAAGATGCCA------GCGAA------------------ATGTCTGCAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................AAGATGCCA------GCGAA------------------ATGTCTG....2112.0020200000000
.....................GAAGCTTTT------GG---GGGTAGACAT...................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................................CATTC-ACCGTTTGACGCCCGTCGGTTG..........................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
.................................................ATTC-ACCGTTTGACGCCCGTC...............................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
...................................................................CGTCGGTTAGT----TG----------------------------TCCCTCTT..............................................................................................................................................................................................................................................................................................................2111.0010100000000
...............CAATCCGAAGCTTTT------GG---GGGTAGAC.....................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
.....................................................................................................................................................................................................................................................................................................................................................................AACC------AGCACCAAGATGCCA------GCGAA------------------ATGT.......2811.0010100000000
...................CCGAAGCTTTT------GG---GGGTAGACA....................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
.......................................................................................................................................................................................................................................................................................................................................................................................GATGCCA------GCGAA------------------ATGTCTG....1911.0010100000000
.........................................................................................................................TT----G----TTT----GGGCCGTGTCTGA-GAA..........................................................................................................................................................................................................................................................................2211.0010100000000
...CGCAGCCGCATTCAATCCGAA..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
...........................................................................................................................................................................................................................................................................................................................................................GTTCGTTCTCAACC------AGCACCAA...............................................2211.0010010000000
................................................CATTC-ACCGTTTGACGCCCGT................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
...............................................ACATTC-ACCGTTTGACGCC...................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
.........................................................................................................................................................................TAATAACA------------------------AAA------------------------------------------------------------------------------------------G-----------TGAGAACT--C.........................................................................................................2111.0010100000000
.....................GAAGCTTTT------GG---GGGTAGAC.....................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
....................................................................................................................................................................................................................................................................................................................................................................CAACC------AGCACCAAGATGCCA------GC................................2211.0010000100000
..........................................................................TAGT----TG----------------------------TCCCTCTTCTT----G----TTT----G..........................................................................................................................................................................................................................................................................................2211.0010100000000
....................................................C-ACCGTTTGACGCCCGTCGGTTAGT----C...................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
.............................................AGACATTC-ACCGTTTGACGCCC..................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..................................................TTC-ACCGTTTGACGCCCG.................................................................................................................................................................................................................................................................................................................................................................1811.0010000010000
......AGCCGCATTCAATCCGAAGCTTTT------GG---.............................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.....................................................................................................................CTTCTT----G----TTT----GGGCCGTGTCTGA-.............................................................................................................................................................................................................................................................................2311.0010100000000
........................................................................................................................................................................TTAATAACA------------------------AAA------------------------------------------------------------------------------------------G-----------TGAGAACT--CC-T......................................................................................................2411.0010100000000
............................................................................................................................................................................................................................................................................................................................................C--TTCCGCTCCATAGTTCG......................................................................1811.0010000100000
droPer2
CATCGCAGCCGCATTCAATCCGAAGCTTTT------GG---GGGTAGACATTC-ACCGTTTGACGCCCGTCGGTTAGT----TG----------------------------TCCCTCTTGTT----G----TTT----GGGCCGTGTCTGA-GAAGTGAAATACATTTTAATAACG------------------------AAA------------------------------------------------------------------------------------------G-----------TGAGAACT--CC-TC-------CAC-C--TTCCGCTCCATAGTTCGTTCTCAACC------AGCACCAAGATGCCA------GCGAA------------------ATGTCTGCAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................G-----------TGAGAACT--CC-TC-------CAC-C--TTCCGCTCC..............................................................................2615.005500000
................................................CATTC-ACCGTTTGACGCC...................................................................................................................................................................................................................................................................................................................................................................1814.004400000
...............................................................................................................................G----TTT----GGGCCGTGTCTGA-GAA..........................................................................................................................................................................................................................................................................2014.004200002
.............................................................................................................................................................................AACG------------------------AAA------------------------------------------------------------------------------------------G-----------TGAGAACT--CC-TC-------CAC-C--.......................................................................................2414.004400000
.........................................................GTTTGACGCCCGTCGGTTAGT----TG----------------------------TCCCTC................................................................................................................................................................................................................................................................................................................2913.003300000
.............................................................................................................................................................................AACG------------------------AAA------------------------------------------------------------------------------------------G-----------TGAGAACT--CC-TC-------CAC-C--TT.....................................................................................2612.002200000
................................................CATTC-ACCGTTTGACGCCC..................................................................................................................................................................................................................................................................................................................................................................1912.002200000
...............................................................CGCCCGTCGGTTAGT----TG----------------------------TCCCTCTT..............................................................................................................................................................................................................................................................................................................2512.002200000
..........................................................................................................................................................................AATAACG------------------------AAA------------------------------------------------------------------------------------------G-----------TGAGAACT--CC-T......................................................................................................2212.002200000
..........................................................................................................................T----G----TTT----GGGCCGTGTCTGA-GAAGTGAA.....................................................................................................................................................................................................................................................................2612.002200000
.............................................................................................................................................................................AACG------------------------AAA------------------------------------------------------------------------------------------G-----------TGAGAACT--CC-T......................................................................................................1911.001100000
....................CGAAGCTTTT------GG---GGGTAGA......................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
...................................................................................................................................................................................................................................................................................................................GAGAACT--CC-TC-------CAC-C--TTCCGCC................................................................................2211.001100000
.......................AGCTTTT------GG---GGGTAGACATTC-ACC.............................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.......................AGCTTTT------GG---GGGTAGACATTC-AC..............................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...........................................GTAGACATTC-ACCGTTTGACGCCC..................................................................................................................................................................................................................................................................................................................................................................2411.001100000
............ATTCAATCCGAAGCTTTT------G.................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
......................................................................................................................................................................................................................................................................................................G-----------TGAGAACT--CC-TC-------CAC-C--TTCCGCT................................................................................2411.001100000
..........................................................................................................................T----G----TTT----GGGCCGTGTCTGA-GAAGTGAAA....................................................................................................................................................................................................................................................................2711.001100000
.....................................................................................................................................TT----GGGCCGTGTCTGA-GAAGT........................................................................................................................................................................................................................................................................2011.001000001
.........................CTTTT------GG---GGGTAGACATT..................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
............................................................................................................................................GGCCGTGTCTGA-GAAGTGAAATAC.................................................................................................................................................................................................................................................................2411.001100000
.........................................................GTTTGACGCCCGTCGGTTAGT----TG----------------------------TC....................................................................................................................................................................................................................................................................................................................2511.001100000
..........................................................................................................................T----G----TTT----GGGCCGTGTCTGA-GAAGT........................................................................................................................................................................................................................................................................2311.001100000
................................................................GCCCGTCGGTTAGT----TG----------------------------TCCCT.................................................................................................................................................................................................................................................................................................................2111.001100000
..........GCATTCAATCCGAAGCTTTT------GG---GGG..........................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..........................................................................................................................T----G----TTT----GGGCCGTGTCTGA-GA...........................................................................................................................................................................................................................................................................2011.001100000
...................................................................................................................................................................................................................................................................................................................GAGAACT--CC-TC-------CAC-C--TTCCGCT................................................................................2211.001100000
....................................................C-ACCGTTTGACGCCCGTCGGG............................................................................................................................................................................................................................................................................................................................................................2111.001100000
....................................................................................................................................................................................................................................................................................................................................................CTCCATAGTTCGTTCTCAACC------A......................................................2211.001001000
.............................................AGACATTC-ACCGTTTGACGCCCGTC...............................................................................................................................................................................................................................................................................................................................................................2511.001001000
........................GCTTTT------GG---GGGTAGACAT...................................................................................................................................................................................................................................................................................................................................................................................1811.001000100
...........................................GTAGACATTC-ACCGTTTGAC......................................................................................................................................................................................................................................................................................................................................................................2011.001100000
............................TT------GG---GGGTAGACATTC-AC..............................................................................................................................................................................................................................................................................................................................................................................1811.001010000
....................................................C-ACCGTTTGACGCCCGTCGGT............................................................................................................................................................................................................................................................................................................................................................2111.001100000
...........................................................TTGACGCCCGTCGGTTAGT----TG----------------------------TC....................................................................................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................................................................................................................................................................................................................GAACT--CC-TC-------CAC-C--TTCCGCTCC..............................................................................2211.001010000
..........................................................................................................................T----G----TTT----GGGCCGTGTCTGA-G............................................................................................................................................................................................................................................................................1911.001000001
..............................................................................................................................................................................................................................................................................................................................................................CGTTCTCAACC------AGCACCAAGATGCCA------..................................2611.001000010
..........................................GGTAGACATTC-ACCGTTTGAC......................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droWil2
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACACAATG------TCTTCAAA------------------ATGCCTGCAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACACAATG------TCTTCAAA------------------...........2011.00100010
......................................................................................................................................................................................................................................................................................................................................................................................CAATG------TCTTCAAA------------------ATGCCT.....1911.00100010
................................................................................................................................................................................................................................................................................................................................................................................GCAACACAATG------TCTTCAAA------------------ATGC.......2311.00101000
droVir3
CGTCGCAG------TCAAGCTGAAGCATTGAACGCGCG---TGGTAGCCATTC-ACCGTTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGTTA------------------GT---------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................TTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGTTA------------------G..........221338.0033837117220401104530102214231121271236463134445367300000100000000000000850
..........................................................TTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGTTA------------------GT---------23158.00582113013312100000100211012131131020102001000000000000000000001420
..........................................................TTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGTTA------------------...........21122.0022010000001000001000100210201010040100001100000000000000000000130
..........................................................TTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGTT..............................20118.00180111000000000001001001000100000010000000000000000000000000000100
..........................................................TTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGTTA------------------GA---------2315.005001000000000101001000000001000000000000000000000000000000000000
..........................................................TTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGTTA------------------AA---------2315.005000000000000000000000000000000000000311000000000000000000000000
................AAGCTGAAGCATTGAACGCGCG---T............................................................................................................................................................................................................................................................................................................................................................................................2314.004001001000000000000000000010000000100000000000000000000000000000
................................................CATTC-ACCGTTTGACGCTCC.................................................................................................................................................................................................................................................................................................................................................................2013.003000100000000000001000000000000000000000000000000000000000000100
................AAGCTGAAGCATTGAACGCGCG---.............................................................................................................................................................................................................................................................................................................................................................................................2213.003000000100000000000000000010100000000000000000000000000000000000
.......................AGCATTGAACGCGCG---TGGTAGC......................................................................................................................................................................................................................................................................................................................................................................................2213.003001100000000000000000010000000000000000000000000000000000000000
..........................................................TTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGTTA------------------A..........2213.003000000000000000000000000000100000000001000000000000000000000010
..........................................GGTAGCCATTC-ACCGTTTGACGCTC..................................................................................................................................................................................................................................................................................................................................................................2513.003000200000000000000000000000001000000000000000000000000000000000
...........................................................TTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGTTA------------------G..........2113.003003000000000000000000000000000000000000000000000000000000000000
................AAGCTGAAGCATTGAACGCGC.................................................................................................................................................................................................................................................................................................................................................................................................2113.003001000000000001001000000000000000000000000000000000000000000000
..........................................................TTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGTTA------------------T..........2212.002000000000000000000000010000000100000000000000000000000000000000
..........................ATTGAACGCGCG---TGGTAGCCATTC-ACC.............................................................................................................................................................................................................................................................................................................................................................................2712.002101000000000000000000000000000000000000000000000000000000000000
..........................................................TTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGTTA------------------GC---------2312.002020000000000000000000000000000000000000000000000000000000000000
.....................GAAGCATTGAACGCGCG---TGGTAGC......................................................................................................................................................................................................................................................................................................................................................................................2412.002000000000000010000000000000000000000000000000000000000000001000
....GCAG------TCAAGCTGAAGCATTGAACG....................................................................................................................................................................................................................................................................................................................................................................................................2412.002001000000000000000000000010000000000000000000000000000000000000
................................CGCGCG---TGGTAGCCATTC-ACC.............................................................................................................................................................................................................................................................................................................................................................................2112.002000010000000000001000000000000000000000000000000000000000000000
.......G------TCAAGCTGAAGCATTGAACGCGCG---T............................................................................................................................................................................................................................................................................................................................................................................................2612.002000000000000000000110000000000000000000000000000000000000000000
..........................ATTGAACGCGCG---TGGTAGCC.....................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000001000000000000000000000000000000010
.............................GAACGCGCG---TGGTAGCCATT..................................................................................................................................................................................................................................................................................................................................................................................2012.002000100000000000000000000000000000000000000000000000000000001000
................AAGCTGAAGCATTGAACGCGCG---TGGT.........................................................................................................................................................................................................................................................................................................................................................................................2612.002000100000000000000100000000000000000000000000000000000000000000
..........................................................TTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGTTA------------------GG---------2312.002110000000000000000000000000000000000000000000000000000000000000
..........................................................TTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGTTT------------------...........2112.002010000000000000000000000000000000000000100000000000000000000000
.............................................AGCCATTC-ACCGTTTGACGCT...................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
..........................ATTGAACGCGCG---TGGTAG.......................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
................................................CATTC-ACCGTTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTC..................................2511.001100000000000000000000000000000000000000000000000000000000000000
.........................................................GTTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCG.................................1811.001001000000000000000000000000000000000000000000000000000000000000
.................AGCTGAAGCATTGAACGCGCG---TG...........................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
...............CAAGCTGAAGCATTGAACGCGCG---T............................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.................AGCTGAAGCATTGAACGCGCG---.............................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
....................................................C-ACCGTTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTC..................................2111.001100000000000000000000000000000000000000000000000000000000000000
.............................GAACGCGCG---TGGTAGCCA....................................................................................................................................................................................................................................................................................................................................................................................1811.001000000001000000000000000000000000000000000000000000000000000000
........................................................CGTTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCG.................................1911.001001000000000000000000000000000000000000000000000000000000000000
............................................................TGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGTTA------------------G..........2011.001001000000000000000000000000000000000000000000000000000000000000
............................................................TGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGTTA------------------GT---------2111.001001000000000000000000000000000000000000000000000000000000000000
....GCAG------TCAAGCTGAAGCATTGAACGCGC.................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
................AAGCTGAAGCATTGAACGC...................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000010000000000000000000000000
..........................................................TTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGTTC------------------...........2111.001000000000000000000000000000000010000000000000000000000000000000
......................................................ACCGTTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCT...................................1911.001001000000000000000000000000000000000000000000000000000000000000
.......G------TCAAGCTGAAGCATTGAACGCGC.................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
.........................................................GTTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGC................................1911.001000000000000000000000000000000010000000000000000000000000000000
CGTCGCAG------TCAAGCTGAAGC............................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.......................AGCATTGAACGCGCG---TGG..........................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000010000000000000000000000000000000000000
................................CGCGCG---TGGTAGCCATTC-A...............................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
.......G------TCAAGCTGAAGCATTGAAC.....................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
....................TGAAGCATTGAACGCGCG---TGGT.........................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
............................................TAGCCATTC-ACCGTTTGACG.....................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......G------TCAAGCTGAAGCATTGAA......................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
......................................................ACCGTTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCG.................................2111.001000000000000000000000000000000000000000000000000000000000000010
....GCAG------TCAAGCTGAAGCATTGA.......................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................AGCATTGAACGCGCG---TGGTAGCC.....................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
................AAGCTGAAGCATTGAACGCGCG---TG...........................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000010000000000000000000000000000000000000000000000
.............................GAACGCGCG---TGGTAGCCATTC-ACCGTTT.........................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000001000000000000000000000000000000
...........................................GTAGCCATTC-ACCGTTTGACGCTC..................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
..................................................TTC-ACCGTTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGG................................2511.001000000000000000000000000000100000000000000000000000000000000000
......................................................ACCGTTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGG................................2211.001001000000000000000000000000000000000000000000000000000000000000
......................AAGCATTGAACGCGCG---TGGT.........................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000010000000000000000000000000000000000000000000
................................................CATTC-ACCGTTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC....................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................ATTGAACGCGCG---TGGTAGC......................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
.....................GAAGCATTGAACGCGCG---TGGTAGCC.....................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
.................................................ATTC-ACCGTTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------......................................2011.001000000000000000000000000000000000010000000000000000000000000000
.............................................AGCCATTC-ACCGTTTGAC......................................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
..........................ATTGAACGCGCG---TGGTAGCCATT..................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
...............CAAGCTGAAGCATTGAACGCGC.................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
....................TGAAGCATTGAACGCGCG---.............................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000010000000000000000000000000000000000000000
................................................CATTC-ACCGTTTGACGCTC..................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
...............CAAGCTGAAGCATTGAACG....................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
.....................................G---TGGTAGCCATTC-ACCGTTT.........................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................AGCCATTC-ACCGTTTGACG.....................................................................................................................................................................................................................................................................................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
...........................TTGAACGCGCG---TGGTAGCC.....................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............................................AGCCATTC-ACCGTTTGACGCTC..................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
..................................................TTC-ACCGTTTGACGCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCT...................................2211.001010000000000000000000000000000000000000000000000000000000000000
.......................AGCATTGAACGCGCG---TGGT.........................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
CGACGCTGCAG---TCAAGCTGAAGCATTGAACGCGCG---TGGTAGCCATTC-ACCGTTTAACGCTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTCGGTT------AGT----------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................TTTAACGCTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTCGGTT------AG.....................................................22111.0011302231
..........................................................TTTAACGCTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTCGGTT------AGT----------------------------------------------------2314.004001030
.............................................AGCCATTC-ACCGTTTAACGCTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTC.................................................................2811.001100000
........................GCATTGAACGCGCG---TGGTAG.......................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
........................................................CGTTTAACGCTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTCGGTT------AGT----------------------------------------------------2511.001000010
..............................................GCCATTC-ACCGTTTAACGCTC..................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............................TGAACGCGCG---TGGTAGCCA....................................................................................................................................................................................................................................................................................................................................................................................1911.001000100
....................................................C-ACCGTTTAACGCTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTT..................................................................2011.001100000
...............CAAGCTGAAGCATTGAACGCGCG---TG...........................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.....................GAAGCATTGAACGCGCG---TGGTA........................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
...................................................TC-ACCGTTTAACGCTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTC.................................................................2211.001000010
................AAGCTGAAGCATTGAACGC...................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
..............................................GCCATTC-ACCGTTTAACGCTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT...................................................................2511.001100000
.........................................................GTTTAACGCTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTCGGT..............................................................2011.001000001
..........................................GGTAGCCATTC-ACCGTTTAACGCTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG....................................................................2811.001100000
.........................CATTGAACGCGCG---TGGTAGCCAT...................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...........................................GTAGCCATTC-ACCGTTTAACGCT...................................................................................................................................................................................................................................................................................................................................................................2311.001000100
..........................................................TTTAACGCTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTCGGTT------.......................................................2011.001000100
................................CGCGCG---TGGTAGCCATTC-ACCG............................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.............................................................AACGCTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTCGGTT------AGT----------------------------------------------------2011.001000010
.........AG---TCAAGCTGAAGCATTG........................................................................................................................................................................................................................................................................................................................................................................................................1820.501001000
droGri2
CGCCGCAGT------CAAGCTGAAACATTGAACGCGCG---TGGTAGCCATTC-ACCGTTCGACGCTCCTTC-TCGGTTAGTAGAAACCCACTTCCCCTCCTTGCGTTCGTTCTTCGCTTGCT----G----TT-------------TTGCA-AA---------------------------------ATTTAACATTCGT---GCGT---G----CTTT------------------------GCATTTCC---TGTTAATA------------ACAGTGT--TTTT--A---GTGTTTGGCTAAACTACATT---TTGT----T--TTT-C--TTGTTTTTTTCTGTTCTTTTTTTGTTTTTGTTTACAGCTGTATG------TCGACGAAAAGCCAAAACAACATGAAATTCGTTACGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................ATTC-ACCGTTCGACGCTCCTT...............................................................................................................................................................................................................................................................................................................................................................2112.00211
...........................TTGAACGCGCG---TGGTAGC......................................................................................................................................................................................................................................................................................................................................................................................1811.00110
...............CAAGCTGAAACATTGAACGCGCG---TG...........................................................................................................................................................................................................................................................................................................................................................................................2511.00101
.............................GAACGCGCG---TGGTAGCCA....................................................................................................................................................................................................................................................................................................................................................................................1811.00110
.............................GAACGCGCG---TGGTAGCCATTC-ACC.............................................................................................................................................................................................................................................................................................................................................................................2411.00110

Generated: 05/19/2015 at 05:28 AM