ID:dsi_3636 |
Coordinate:3r:4127402-4127551 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -17.5 | -17.1 | -17.1 |
 |
 |
 |
intergenic
No Repeatable elements found
|
AGCTGGGGAAGAATGCCCACAATCATCCGCCGCGCTTTTTGGGTGGCAAGGTGCCTGCTAAACTAATGCCTAAGGATGCCTTTTATCCTCAATATTAAATGAGATTACACACACCCGAAAGAATGATATTTGTACAAAAGATTATACCCAGTTGCATGCAGTACCTACATTAAGATCATTAAACTTATGTGGCAGCCGTCATTTCGTCATCATACCATCTTCATACCATCTTCATCTTCGTCTTCATTTT
**************************************************.(((.(((..((((........((((((.....)))))).................................(((((.(((.....))).)))))....))))))).)))((..((((((.(((.........)))))))))..))....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
SRR553485 Chicharo_3 day-old ovaries |
SRR902008 ovaries |
M024 male body |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................TTAAACTTATGTGGCAGCCGTCATT............................................... | 25 | 0 | 1 | 5.00 | 5 | 3 | 2 | 0 | 0 | 0 |
| ..............................................................................................................................TATTTGTAAAAAAGATTATACCCAGT.................................................................................................. | 26 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................................................................TCATTAAACTTATGTGGCAGCCGTCATT............................................... | 28 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ..............................................CAAGGGGCCTGCTCAACT.......................................................................................................................................................................................... | 18 | 2 | 2 | 1.00 | 2 | 0 | 0 | 0 | 2 | 0 |
| ...................................................................................................................................................................................TAAACTTATGTGGCAGCCGTCATTT.............................................. | 25 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| ........................................................................................................................................................TGCATGCAGTACCTACATTAAGATCAT....................................................................... | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| .........................................................................................................................................................................................TATGTGGCAGCCGTCATTTCGTCATCA...................................... | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 |
|
TCGACCCCTTCTTACGGGTGTTAGTAGGCGGCGCGAAAAACCCACCGTTCCACGGACGATTTGATTACGGATTCCTACGGAAAATAGGAGTTATAATTTACTCTAATGTGTGTGGGCTTTCTTACTATAAACATGTTTTCTAATATGGGTCAACGTACGTCATGGATGTAATTCTAGTAATTTGAATACACCGTCGGCAGTAAAGCAGTAGTATGGTAGAAGTATGGTAGAAGTAGAAGCAGAAGTAAAA
**************************************************.(((.(((..((((........((((((.....)))))).................................(((((.(((.....))).)))))....))))))).)))((..((((((.(((.........)))))))))..))....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
M023 head |
O002 Head |
M025 embryo |
M024 male body |
SRR618934 dsim w501 ovaries |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................GTACGTTATGGATGGAATAC............................................................................ | 20 | 3 | 2 | 2.50 | 5 | 2 | 2 | 0 | 1 | 0 | 0 | 0 |
| ........................................................CGGTTTGATTACGGATT................................................................................................................................................................................. | 17 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................................................................................................GTAATTTGAATACACCGT........................................................ | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................................................................................................................TCGGCAGAAAAGTAGTAG....................................... | 18 | 2 | 5 | 0.20 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ..................................................................................................................................................................................................................................GTCGAAGTAGAAGCAGAA...... | 18 | 1 | 9 | 0.11 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .......................................................................................................................................................................GTAATACTGGTAATTTGA................................................................. | 18 | 2 | 9 | 0.11 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .......................................................................................................................................................................GTAAGTCTGGTAATTTGA................................................................. | 18 | 2 | 14 | 0.07 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ....................................................................................TACGAGTTATTAGTTACTCT.................................................................................................................................................. | 20 | 3 | 14 | 0.07 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ..............................................GTTCCACGGACGTTT............................................................................................................................................................................................. | 15 | 1 | 16 | 0.06 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| .........................................................................................................................................................................................................................AGAAGGATAGCAGAAGTAGA............. | 20 | 3 | 19 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ........................TCGCCGGGGCGAAAAACCC............................................................................................................................................................................................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Generated: 04/23/2015 at 08:39 PM