ID:

dsi_3519

 Coordinate:

4:771162-771311 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.5 -8.4 -8.1

Flybase annnotation

CDS [4_770802_771161_-]; exon [4_770784_771161_-]; intron [4_771162_772028_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTAAATTCCGTCAACGCCAGTCAAAAAAATTGTGTTGGAGTTTATTTAAGCTTATATATATTTATTTAGAAAGCCAACCAATGAGTAACAAGTACTTACGCTTAATAACGTATGACAAAAATGATAAGTTGGACTGCAAGGGGTATATAATTGTGTACATTGTGTTTACAACATATTATTTTTTAAATCTTTCTTTTCAGGACGCAAAAGGAATAAATGGACATTTAAAAATTTTAGCTCGACGAAAAAA
**********************************************************..............((...(((((..((..........((((........))))...........))..)))))...))..........******************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M053
female body
 SRR902009
testis
..............................TGTGTTGGAGTTTATTTAAGCTTATA.................................................................................................................................................................................................. 26 0 1 55.00 55 30 11 8 0 2 4 0 0
.............................TTGTGTTGGAGTTTATTTAAGCTTA.................................................................................................................................................................................................... 25 0 1 43.00 43 17 11 8 0 3 4 0 0
.............................TTGTGTTGGAGTTTATTTAAGCTTATA.................................................................................................................................................................................................. 27 0 1 39.00 39 18 11 6 0 3 1 0 0
.........................................................................................................................TGATAAGTTGGACTGCAAGGGGTATA....................................................................................................... 26 0 1 36.00 36 8 8 3 14 3 0 0 0
..............................TGTGTTGGAGTTTATTTAAGCTTA.................................................................................................................................................................................................... 24 0 1 34.00 34 18 7 6 0 2 1 0 0
..............................TGTGTTGGAGTTTATTTAAGCTTATATA................................................................................................................................................................................................ 28 0 1 27.00 27 18 3 5 0 1 0 0 0
.TAAATTCCGTCAACGCCAGTCAAAAAAA............................................................................................................................................................................................................................. 28 0 1 26.00 26 4 15 2 0 5 0 0 0
.................................................................................................................................TGGACTGCAAGGGGTATATAATTGTG............................................................................................... 26 0 1 18.00 18 2 8 2 4 2 0 0 0
................................................................................................................TGACAAAAATGATAAGTTGGACTGC................................................................................................................. 25 0 1 14.00 14 7 2 1 0 4 0 0 0
................................................................................................................TGACAAAAATGATAAGTTGGACTGCAA............................................................................................................... 27 0 1 12.00 12 5 2 4 1 0 0 0 0
................................................................................................................................................................................................................AGGAATAAATGGACATTTAAAAATT................. 25 0 1 12.00 12 6 5 1 0 0 0 0 0
.TAAATTCCGTCAACGCCAGTCAAAAAA.............................................................................................................................................................................................................................. 27 0 1 10.00 10 3 4 0 0 3 0 0 0
.........................................................................................................................TGATAAGTTGGACTGCAAGGGGTAT........................................................................................................ 25 0 1 9.00 9 4 3 0 0 2 0 0 0
.....................................................................................................................................................................................................CAGGACGCAAAAGGAATAAATGGACATT......................... 28 0 1 9.00 9 1 7 0 0 1 0 0 0
............................................................................................................................TAAGTTGGACTGCAAGGGGTATATAA.................................................................................................... 26 0 1 8.00 8 2 1 2 3 0 0 0 0
....................................................................................................................................................................................................TCAGGACGCAAAAGGAATAAATGGACATT......................... 29 0 1 8.00 8 2 5 1 0 0 0 0 0
.........................................................................................................................................................................................................................TGGACATTTAAAAATTTTAGCTCGACGA..... 28 0 1 7.00 7 4 1 0 2 0 0 0 0
.................................................................................................................................................................................................TTTTCAGGACGCAAAAGGAATAAATGGAC............................ 29 0 1 7.00 7 2 5 0 0 0 0 0 0
..............................................................................................................TATGACAAAAATGATAAGTTGGACTGC................................................................................................................. 27 0 1 7.00 7 4 3 0 0 0 0 0 0
................................................................................................................TGACAAAAATGATAAGTTGGACTGCA................................................................................................................ 26 0 1 7.00 7 6 0 0 0 0 0 1 0
.....TTCCGTCAACGCCAGTCAAAAAAAT............................................................................................................................................................................................................................ 25 0 1 6.00 6 2 2 0 0 1 1 0 0
....................................................................................................................................................................................................TCAGGACGCAAAAGGAATAAATGGAC............................ 26 0 1 6.00 6 2 1 2 1 0 0 0 0
................................................................................................................................................................................................................AGGAATAAATGGACATTTAAAAATTT................ 26 0 1 6.00 6 5 1 0 0 0 0 0 0
.............................TTGTGTTGGAGTTTATTTAAGCTTATATA................................................................................................................................................................................................ 29 0 1 5.00 5 1 2 2 0 0 0 0 0
..............................................................................................................................................................................................................AAAGGAATAAATGGACATTTAAAAATT................. 27 0 1 5.00 5 1 4 0 0 0 0 0 0
............................................................................................................................TAAGTTGGACTGCAAGGGGTATATAAT................................................................................................... 27 0 1 4.00 4 2 0 0 2 0 0 0 0
................................TGTTGGAGTTTATTTAAGCTTATATA................................................................................................................................................................................................ 26 0 1 4.00 4 2 0 2 0 0 0 0 0
.........................................................................................................................TGATAAGTTGGACTGCAAGGGGTATAA...................................................................................................... 27 1 1 4.00 4 2 0 0 2 0 0 0 0
...............................................................................................................................................................................................................AAGGAATAAATGGACATTTAAAAATT................. 26 0 1 4.00 4 1 2 1 0 0 0 0 0
.................CAGTCAAAAAAATTGTGTTGGAGTT................................................................................................................................................................................................................ 25 0 1 4.00 4 1 2 1 0 0 0 0 0
...........................................................................................................ACGTATGACAAAAATGATAAGTTGGAC.................................................................................................................... 27 0 1 3.00 3 2 1 0 0 0 0 0 0
.....................................................................................................TTAATAACGTATGACAAAAATGATAAGT......................................................................................................................... 28 0 1 3.00 3 0 2 1 0 0 0 0 0
............AACGCCAGTCAAAAAAATTGTGTTGGA................................................................................................................................................................................................................... 27 0 1 3.00 3 3 0 0 0 0 0 0 0
..........................................................TATTTATTTAGAAAGCCAACCAATGAGT.................................................................................................................................................................... 28 0 1 3.00 3 3 0 0 0 0 0 0 0
................................................................................................................TGACAAAAATGATAAGTTGGACTG.................................................................................................................. 24 0 1 3.00 3 2 0 0 1 0 0 0 0
.................................................................................................................................TGGACTGCAAGGGGTATATAATTGT................................................................................................ 25 0 1 3.00 3 0 0 0 3 0 0 0 0
.........................................................................................................................TGATAAGTTGGACTGCAAGGGGT.......................................................................................................... 23 0 1 3.00 3 1 1 1 0 0 0 0 0
......................................................................................................................................................................................................AGGACGCAAAAGGAATAAATGGACATT......................... 27 0 1 3.00 3 0 3 0 0 0 0 0 0
.TAAATTCCGTCAACGCCAGTCAAAAAAAT............................................................................................................................................................................................................................ 29 0 1 3.00 3 1 1 1 0 0 0 0 0
..........................................................TATTTATTTAGAAAGCCAACCAATGAG..................................................................................................................................................................... 27 0 1 3.00 3 3 0 0 0 0 0 0 0
.......................................................................................................................................................................................TAAATCTTTCTTTTCAGGACGCAAAAGG....................................... 28 0 1 3.00 3 1 2 0 0 0 0 0 0
............................ATTGTGTTGGAGTTTATTTAAGCTTA.................................................................................................................................................................................................... 26 0 1 3.00 3 1 2 0 0 0 0 0 0
.........................................................................................................................TGATAAGTTGGACTGCAAGGGGTA......................................................................................................... 24 0 1 3.00 3 0 2 0 1 0 0 0 0
......................................................TATATATTTATTTAGAAAGCCAACCAA......................................................................................................................................................................... 27 0 1 2.00 2 1 0 0 1 0 0 0 0
..............CGCCAGTCAAAAAAATTGTGTTGGA................................................................................................................................................................................................................... 25 0 1 2.00 2 1 0 0 0 0 1 0 0
................................................................................................................................................................................................CTTTTCAGGACGCAAAAGGAATAAATGGA............................. 29 0 1 2.00 2 1 1 0 0 0 0 0 0
............................................................................................................CGTATGACAAAAATGATAAGTTGGAC.................................................................................................................... 26 0 1 2.00 2 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................TAAATCTTTCTTTTCAGGACGCAAA.......................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0
.......................................................................................................................AATGATAAGTTGGACTGCAAGGGGTA......................................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0 0
................................................................................................................TGACAAAAATGATAAGTTGGACTGCAAG.............................................................................................................. 28 0 1 2.00 2 1 0 0 0 1 0 0 0
....ATTCCGTCAACGCCAGTCAAAAAA.............................................................................................................................................................................................................................. 24 0 1 2.00 2 1 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................TAAATGGACATTTAAAAATTTTAGCTC.......... 27 0 1 2.00 2 1 1 0 0 0 0 0 0
................................................................................................................................................................................TATTTTTTAAATCTTTCTTTTCAGGA................................................ 26 0 1 2.00 2 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................AGGACGCAAAAGGAATAAATGGACAT.......................... 26 0 1 2.00 2 1 1 0 0 0 0 0 0
...........CAACGCCAGTCAAAAAAATTGTGTTGGA................................................................................................................................................................................................................... 28 0 1 2.00 2 1 1 0 0 0 0 0 0
.....................................................................................................................AAAATGATAAGTTGGACTGCAAGGGG........................................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0 0
.............................TTGTGTTGGAGTTTATTTAAGCTTAA................................................................................................................................................................................................... 26 1 1 2.00 2 1 0 0 0 0 1 0 0
.TAAATTCCGTCAACGCCAGTCAAAAA............................................................................................................................................................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0 0
...............................................................................................................................................................................................................AAGGAATAAATGGACATTTAAAAAT.................. 25 0 1 2.00 2 2 0 0 0 0 0 0 0
............................ATTGTGTTGGAGTTTATTTAAGCTTATA.................................................................................................................................................................................................. 28 0 1 2.00 2 2 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CGCAAAAGGAATAAATGGACATTTAA...................... 26 0 1 2.00 2 0 0 1 1 0 0 0 0
.....................................................................................................................................................................................................................TAAATGGACATTTAAAAATTTTAGCTCGA........ 29 0 1 2.00 2 2 0 0 0 0 0 0 0
.................................................................................................................................TGGACTGCAAGGGGTATATAATTGTGTA............................................................................................. 28 0 1 2.00 2 0 1 0 0 1 0 0 0
..............................................................................................................TATGACAAAAATGATAAGTTGGACTGCA................................................................................................................ 28 0 1 2.00 2 2 0 0 0 0 0 0 0
..................................................................TAGAAAGCCAACCAATGAGTAACAAG.............................................................................................................................................................. 26 0 1 2.00 2 0 0 0 0 0 2 0 0
................................................................................................................TGACAAAAATGATAAGTTGGA..................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0
.................................................................TTAGAAAGCCAACCAATGAGTAACAAG.............................................................................................................................................................. 27 0 1 2.00 2 1 0 1 0 0 0 0 0
.........................................................................................................................TGATAAGTTGGACTGCAAGGG............................................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0 0
....................TCAAAAAAATTGTGTTGGAGTT................................................................................................................................................................................................................ 22 0 1 2.00 2 2 0 0 0 0 0 0 0
.....TTCCGTCAACGCCAGTCAAAAAAA............................................................................................................................................................................................................................. 24 0 1 2.00 2 1 0 1 0 0 0 0 0
.................................................................................................................................................................................................TTTTCAGGACGCAAAAGGAATAAATGG.............................. 27 0 1 2.00 2 0 0 0 2 0 0 0 0
......................................................................................................TAATAACGTATGACAAAAATGATAAGTT........................................................................................................................ 28 0 1 2.00 2 1 0 1 0 0 0 0 0
..................................................................................................................................................................................................TTTCAGGACGCAAAAGGAATAAATG............................... 25 0 1 2.00 2 1 0 1 0 0 0 0 0
...................GTCAAAAAAATTGTGTTGGAGTTTATT............................................................................................................................................................................................................ 27 0 1 2.00 2 0 2 0 0 0 0 0 0
.....................................................................................................................................................................................................................TAAATGGACATTTAAAAATTTTAGC............ 25 0 1 2.00 2 0 2 0 0 0 0 0 0
..................AGTCAAAAAAATTGTGTTGGAGTT................................................................................................................................................................................................................ 24 0 1 2.00 2 1 1 0 0 0 0 0 0
.............................TTGTGTTGGAGTTTATTTAAGCTTAT................................................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTTTCAGGACGCAAAAGGAATAAATGGCC............................ 29 1 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................................................................TGATAAGTTGGACTGCAAGGGGTAGA....................................................................................................... 26 1 1 1.00 1 0 0 0 1 0 0 0 0
.TAAATTCCGTCAACGCCAGTCAAAAAAAAT........................................................................................................................................................................................................................... 30 1 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................ACAAAAATGATAAGTTGGACTGCAT............................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................AGGAATAAATGGACATTTAAAAATTTT............... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................TATTTATTTAGAAAGCCAACCAATGA...................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................AGGAATAAATGGACATTTAAAAA................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
............AACGCCAGTTAAAAAAATTGTGTTGGA................................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................TCAGGACGCAAAAGGAATAAATGGACAT.......................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................CAGGACGCAAAAGGAATAAATGGAC............................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTTTCAGGACGCAAAAGGAATAAATGGA............................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................TCAGGACGCAAAAGGAATAAATGG.............................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0
.........................................................................................................................TGATAAGTTGGACTGCAAGGGG........................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AAGGAATAAATGGACATTTAAAAATTTT............... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................GTGTTGGAGTTTATTTAAGCT...................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0
........................................................................................................................ATGATAAGTTGGACTGCAAGGGGT.......................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................................AAATGATAAGTTGGACTGCAAGGG............................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0
...........CAACGCCAGTCAAAAAAATTGTGT....................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0
..........................AAATTGTGTTGGAGTTTATTTAAGC....................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0
..............................................................................................................TATGACAAAAATGATAAGTTGGACTGCAA............................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................................................TAATTGTGTACATTGTGTTTACAACATA........................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
................................TGTTGGAGTTTATTTAAGCTTATA.................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 1 0 0
..........................................................................................................................GATAAGTTGGACTGCAAGGGGTATATA..................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAAAGGAATAAATGGACATTTAAAAA................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0
..............................TGTGTTGGAGTCTATTTAAGCTTATA.................................................................................................................................................................................................. 26 1 1 1.00 1 0 0 0 0 1 0 0 0
...................................................................AGAAAGCCAACCAATGAGTAACAAG.............................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................AAAGGAATAAATGGACATTTAAAAAT.................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0
........................................................................................CAAGTACTTACGCTTAATAACGTATGA....................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0
.................................................................TTAGAAAGCCAACCAA......................................................................................................................................................................... 16 0 1 1.00 1 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................AGGAATAAATGGACATTTAAAAAT.................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................TGACAAAAATGATAAGTTGGACTGCAAGG............................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0
.....TTCCGTCAACGCCAGTTAAAAAAAA............................................................................................................................................................................................................................ 25 2 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................TTAAATCTTTCTTTTCAGGACGCAAA.......................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................................................TAATTGTGTACATTGTGTTTACAACA............................................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................GGAATAAATGGACATTTAAAAATTT................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................AGGAATAAATGGACATTTAAAAATTTTAGCT........... 31 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................TGTGTACATTGTGTTTACAACATA........................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0
.................................................................................TGAGTAACAAGTACTTACGCTTAATA............................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................CAAAAAAATTGTGTTGGAGTT................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TAAATGGACATTTAAAAATTT................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................TCAGGACGCAAAAGGAATAAATGGA............................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0
.TAAATTCCGTCAACGCCAGTCAAATA............................................................................................................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0
..............................TTTGTTGGAGTTTATTTAAGCTTATA.................................................................................................................................................................................................. 26 1 1 1.00 1 0 0 1 0 0 0 0 0
.......................................................................................................................AATGATAAGTTGGACTGCAAGGGGTATA....................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................TTCAGGACGCAAAAGGAATAAATGGACATT......................... 30 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................TCTGTTGGAGTTTATTTAAGCTTATA.................................................................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................GGAATAAATGGACATTTAAAAATT................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................TTAATAACGTATGACAAAAATGATAAGTT........................................................................................................................ 29 0 1 1.00 1 0 0 0 0 1 0 0 0
........................AAAAATTGTGTTGGAGTTTATTTAAGC....................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
................................................................TTTAGAAAGCCAACCAATGAGTAACAAG.............................................................................................................................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0
........................AAAAATTGTGTTGGAGTTTATTTAAGCT...................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................TTTCTTTTCAGGACGCAAAAG........................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0
.AAAATTCCGTCAACGCCAGTCAAAAAAAT............................................................................................................................................................................................................................ 29 1 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................................................................................GCAAGGGGTATATAATTGTGTACAT.......................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0
..............................................................TATTTAGAAAGCCAACCAATGAGTA................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0
..............................TGTGTTGGAGTTTATTTAAGCTT..................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................CGTATGACAAAAATGATAAGTTGGACTGC................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................TTGTGTTGGAGTTTATTTAAGCTTATAA................................................................................................................................................................................................. 28 1 1 1.00 1 0 0 1 0 0 0 0 0
.................................................................................................................................TGGACTGCAAGGGGTATATAATTG................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................AATCTTTCTTTTCAGGACGCAAAAGGA...................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAAAGGAATAAATGGACATTTAAAAATT................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0
......TCCGTCAACGCCAGTCAAAAAAATTGTGA....................................................................................................................................................................................................................... 29 1 1 1.00 1 0 0 0 0 1 0 0 0
.........................................................................................................................TGATAAGTTGGACTGCATGGGGTATA....................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................................................................TGGACTGCAAGGGGTATATAGTTGTG............................................................................................... 26 1 1 1.00 1 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................GACGCAAAAGGAATAAATGGACATT......................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................GGGGTATATAATTGTGTACATTGTG...................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0
....................................................................................................................AAAAATGATAAGTTGGACTGCAAGGGGTA......................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................................................AAAAATGATAAGTTGGACTGCAAGGGG........................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................TTATATATATTTATTTAGAAAGCCAAC............................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0
.....TTCCGTCAACGCCAGTCAAAAAAAAT........................................................................................................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0
...........................AATTGTGTTGGAGTTTATT............................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 1 0 0
..............................TGTGTTGGAGTTTATTTAAGCTTATATAA............................................................................................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................AAATGATAAGTTGGACTGCAAGGGG........................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................TTATTTTTTAAATCTTTCTTTTCAGGA................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................TCTTTCTTTTCAGGACGCAAAAGGAA..................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................CAAAAATGATAAGTTGGACTGCAAG.............................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 1
.......................................................................................ACAAGTACTTACGCTTAATAACGTATGA....................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................ATTTAGAAAGCCAACCAATGAGTAACA................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................CGCAAAAGGAATAAATGGACATTTAAA..................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
........................................................................................................................................................................................AAATCTTTCTTTTCAGGACGCAAAAGGA...................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................................AACGTATGACAAAAATGATAAGT......................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0
......................................................................................AACAAGTACTTACGCTTAATAACGTA.......................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................TATTATTTTTTAAATCTTTCTTTTCAGGA................................................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0
........................................................TATATTTATTTAGAAAGCCAACCAA......................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................TCTTTTCAGGACGCAAAAGGAATAAATG............................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0
.........................................................................................................TAACGTATGACAAAAATGATAAGTT........................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 1 0
............................................................................................TACTTACGCTTAATAACGTATGACAAAAA................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................TAAATCTTTCTTTTCAGGACGCAAAAGGA...................................... 29 0 1 1.00 1 0 0 0 0 1 0 0 0
.................CAGTCAAAAAAATTGTGTTGGAGTTTA.............................................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................TAAATGGACATTTAAAAATTTTAGCTCGACGA..... 32 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................TATATATTTATTTAGAAAGCCAACCA.......................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................TTTTCAGGACGCAAAAGGAATAAATGGACA........................... 30 0 1 1.00 1 0 0 1 0 0 0 0 0
....ATTCCGTCAACGCCAGTCAAAAAAA............................................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................................................TAACGTATGACAAAAATGATAAGTTGGA..................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................TCTTTTCAGGACGCAAAAGGAATAAATGGA............................. 30 0 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................................................................TGGACCGCAAGGGGTATATAATTGTG............................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGGACATTTAAAAATTTTAGCTCGACGC..... 28 1 1 1.00 1 0 0 0 1 0 0 0 0
...............................................................................................TTACGCTTAATAACGTATG........................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 1 0 0
................................................................................................................TGACAAAAATGATAAGTTGGAC.................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................TAATAACGTATGACAAAAATGATAAGTTGGA..................................................................................................................... 31 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................................................ATGACAAAAATGATAAGTTGG...................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTTTCAGGACGCAAAAGGAATAAATG............................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0
......................................................................................................................AAATGATAAGTTGGACTGCAAGGGGTAT........................................................................................................ 28 0 1 1.00 1 0 0 0 1 0 0 0 0
..........................................TATTTAAGCTTATATATATTTATTTAGA.................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0
..................................................................TAGAAAGCCAACCAATGAGTAACAAGTA............................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................TAAGTTGGACTGCAAGGGGTATATA..................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................TAACAAGTACTTACGCTTAATAACGTA.......................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................................................................AATGATAAGTTGGACTGCAAGGGGTAT........................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................AATGGACATTTAAAAATTTTAGCTCGACG...... 29 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................................TAAGCTTATATATATTTATTTAGA.................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CAGGACGCAAAAGGAATAAATGGACAT.......................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................TCAGGACGCAAAAGGAAA.................................... 18 1 3 0.33 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................TTCAGGACAAAGAAGGAATAAA................................. 22 3 4 0.25 1 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................AAAGGAAGAAATGGAGAATTA....................... 21 3 15 0.07 1 0 0 0 0 0 0 0 1
...........................................................................................................................................................................................................................................AGCGCGACGAAAAAA 15 1 18 0.06 1 0 0 0 0 0 1 0 0
..........GCAACGCCCGTTAAAAAAA............................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 1 0 0

Anti-sense strand reads

GATTTAAGGCAGTTGCGGTCAGTTTTTTTAACACAACCTCAAATAAATTCGAATATATATAAATAAATCTTTCGGTTGGTTACTCATTGTTCATGAATGCGAATTATTGCATACTGTTTTTACTATTCAACCTGACGTTCCCCATATATTAACACATGTAACACAAATGTTGTATAATAAAAAATTTAGAAAGAAAAGTCCTGCGTTTTCCTTATTTACCTGTAAATTTTTAAAATCGAGCTGCTTTTTT
*******************************************************************************************************..............((...(((((..((..........((((........))))...........))..)))))...))..........********************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 M023
head
 M025
embryo
 M053
female body
.........................................................................................................................................................................................TTAGAAAGAAAAGTCCTGCGTTTT......................................... 24 0 1 7.00 7 0 0 5 2 0 0 0 0 0 0
...TTAAGGCAGTTGCGGTCAGTTTT................................................................................................................................................................................................................................ 23 0 1 6.00 6 0 4 0 1 0 1 0 0 0 0
............................................................AAATAAATCTTTCGGTTGGTTACTCAT................................................................................................................................................................... 27 0 1 3.00 3 2 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................AAAAATTTAGAAAGAAAAGTCCTGCGTTT.......................................... 29 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GTAAATTTTTAAAATCGAGCTGCTTTT.. 27 0 1 3.00 3 2 0 0 0 0 1 0 0 0 0
.ATTTAAGGCAGTTGCGGTCAGTTTT................................................................................................................................................................................................................................ 25 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0
............................................................AAATAAATCTTTCGGTTGGTTACTCA.................................................................................................................................................................... 26 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................TTACTATTCAACCTGACGTTCCCCATAT....................................................................................................... 28 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0
.......................................................................TCGGTTGGTTACTCATTGTTCATGAAT........................................................................................................................................................ 27 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0
......................................................................................................................................................................ATGTTGTATAATAAAAAATTTAGAAAG......................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................ACTCATTGTTCATGAATGCGAATTAT............................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................TTAGAAAGAAAAGTCCTGCGTTT.......................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.ATTTAAGGCAGTTGCGGTCAGTTTTT............................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................AAAATTTAGAAAGAAAAGTCCTGCGTT........................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................GTCCTGCGTTTTCCTTATTTA................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0
...TTAAGGCAGTTGCGGTCAGTTTTTT.............................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........GCAGTTGCGGTCAGTTTTTTT............................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1
...............................................................TAAATCTTTCGGTTGGTTACTCAT................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................TGCGAATTATTGCATACTGTTTTTACT.............................................................................................................................. 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
........................................................................CGGTTGGTTACTCATTGTTCATGAATGC...................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
GATTTAAGGCAGTTGCGGTCAGTTT................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................GTCAGTTTTTTTAACACA....................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
...TTAAGGCAGTTGCGGT....................................................................................................................................................................................................................................... 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................TTGCATACTGTTTTTACTATTCAACC...................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................ATAATAAAAAATTTAGAAAGAAAAGT................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................AGAAAGAAAAGTCCTGCGTTTT......................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................AGAAAGAAAAGTCCTGCGTTTTCCT...................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................AAATAAATCTTTCGGTTGGTTACTC..................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..TTTAAGGCAGTTGCGGTCAGTTTT................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................ATAAATCTTTCGGTTAGTTGCTCATT.................................................................................................................................................................. 26 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..............................................................................................................ATACTGTTTTTACTATTCAACCTGACGT................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................AACACAAATGTTGTATAATAAAAAATTT............................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................TGAATGCGAATTATTGCATACTGTTT................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GTAAATTTTTAAAATCGAGCTGCTTT... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................................ATACTGTTTTTACTATTCAACCTGA................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...TTAAGGCAGTTGCGGTCAGTTTTTTT............................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GCGTTTTCCTTATTTACCTGTAAATT...................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
................................................................AAATCTTTCGGTTGGTTACTCATTGTT............................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................AGTAACACAAATCTTGAATAAT........................................................................ 22 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................AAATTTTTAAAATCG............ 15 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................AAATTTAGAAAGAAA...................................................... 15 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGTTACCTGTAAATTTT.................... 17 1 7 0.14 1 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................AAATTTTTAAAATCGT........... 16 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 4:771112-771361 - dsi_3519 CTAAATTCCGTCAAC--GCCAGTC-----------------------------------------------------------AAAAAAATT---GTGTTGGAGTTTATT----TAAGCT----TATAT----A------------TATTTATTTAGAAAGCCAAC-------------------C-AATGAGTAACAAGTACTTACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATAACGTATGACAAAAATGATAAGTTGGACTGCAAG--------GG-GTATATAATTGTGTACA-----------------------------------------------------------------------T----------------------TG--TGTTTACAACATATTA--TTTT--TTAAATCTTTCTTTTCAGGACGCAAAAGGAATAAATGGACATTTAA-AAATTTTAGCTCGACGAAAAAA
droSec2 scaffold_40:18896-19200 - CTAAATTCCGTCAAC--GCCAGTCTTT--TTT-CGACTGCTCCATTGAAAGCTATATACCGTACTCGTCCCAGGTTTATCAA-ACAGAAATT---GTGTTGGAGTTTATT----TAAGCT----TATAT----A------------TATTTCTTTAGAAAGCCAAC-------------------C-AATGAGTAACAAGTACTTACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATAACGTATGACAAAAATGATAAGTTGGACTGCAAG--------GG-GTATATAATTGTGTACA-----------------------------------------------------------------------T----------------------TG--TGTTTACAACATATTA--TTTT--TTAAATCTTTCTTTTCAGGACGCAAAAGAAATAAATGGACATTTAA-AAATTTTAGCTCGACGAAAAAA
dm3 chr4:983305-983604 - TTAAATTCCGTCAAT--GCTAGTCTTTTTTTTTGGACTGTTCCATTGAGAGCTATATGCCGTAGTCGTCCCAGGTTTATCAA-ACAGAAATT---ATGTTGGAGTTTATTTAGTTAAACT----TATAT----T------------TATTTATTTAGAAAGCCCAT-------------------C-AACGAGTAAAAAGTACTTGCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAAAACATATTACCAAAATGATAAGTTGAACTGCAAA--------G------------------------------------------------------------------------------------------A-------------TATATT---TC--TGTGTACAACATATTA--TTTT--TTAAATCTTTCTTTTCAGGACGCAAAAGGAATAAATGGAAATTTAC-AAATTTTAGCTCGACGAAAAAG
droEre2 scaffold_4512:298047-298316 + AGAACAT------------------------------------------------------------------------------------T---GT-TTGAAGTTTATTTTTTTAAACACATATATGT----A------------TATTTATTTTAAAAACCGAC-------------------C-ATCGAGTAAAGAGTATTTATG--AGCGG---------------------------------------------------------------------------------------------------------AAGCAAAAGAACGGACATG-----------------------------------------------------------------------------------------------------------------------TT-AAAACATCTTACCGAAATGATAAGTTGGACTGGAAG--------GGGGCATATAC-----------------------------------TAACAGCGTAA---------------------------TAAACCGC----------------------TATT-TTGTACAAAAAATTGG-TTTTTTAAATATCTTTCTTTTCAGGAGACAAAAGGAATTAATGGACATATAA-AAGTTTTAACTCGCCGAAAAAA
droYak3 4:1047852-1048138 - CTAAATTCCGTTAGTTAGCTAGTCTTT--TTC-CGACTGTTCCAATGGGAGCCATATGCTATAGTCGTCCCAGATGTATCAAAATAAAAATT---ATGTAGGAGTTTATTCAGTTAAACT----TATAA----A------------TATTTATTTAAAGAGCCGAC-------------------C-ATCAAGTAAGAATTATTTATG--AACGG---------------------------------------------------------------------------------------------------------AAACAAACGA---------------------------------------------------------------------------------------------------------------------------------------------ACGGAAATG----------------------------------------------------------------------------------------------------------TATTGTAACGC----------------------TATT-TTGTACAACAAACA---TTTT-TTAATATCTTTC-TCTTAGGGTGCAAAAGGAATTAATGGACACTTAA-AAATTTTAACTCGACGAAAAAA
droEug1 scf7180000408984:828717-828936 - GAAGACTTTC--AAT-------------------------------------------------------------------------------------TCAGTTG---------------ATA----ACAC-T-------------------------------------------------------------ATATTGTCT-CATATTGTAAAGTAC-----------------------------------------------AATCATGTACAATAGAT-TTTAATGT-----------------TTCCGTGTTAATTTGGGTAACGAATATG------------------------------------------------------------------------------------------------------------------------------------TTAAAAGGAATAAGTTGAAATT-AAT--------CG-TGACAAAATAACATATT-----------------------------------------------------------------------T----------------------AA--TGTTTACTTGGGAATA--TATT--GCAGACCAATCTTTTTAAAACTG--ATAAAATGGGTAA-------------------TTGCTTGAAAAT
droBia1 scf7180000301495:956066-956252 - TACTTTAGCCTAAAT--A--------------------------------------------------------------------------------------------------------TAA----AATTA------------TATTTAGTTGAAGGTCCG-----------------------TATAAATCAAGAGTACTT-CG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTTTAAGGTACTACA----------------------------------------------------------------------------------------CATTAAATCAAATTAATGAAATTGTAATGCTACGT----------------------TG--TCTT---------------------AATAATATTTGTTTCAGAACACGAAAGGATTTAATGCTCATTTAA-GAACTAAAGCTCGCCGAAAAAA
droTak1 scf7180000415235:11470-11719 + CTTTTAGAAAACTTA--TTTTG-----------------------------------------------------------T-ATAGAAATT--GTTGTTGGAACTGACT----TACACT----TTTAC----A------------CTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACGTTTACAACGTTTGCAACGCAATTGAACATCCTATTATTTTTTGTGACAAACAATATAAGACAATAACATC-AATTGTTTAACAAAGAAAAACT---------------------------------------------------------AATTATATGAATATATTATAAATGTATTA---------------------------------------------TTA--AATT--ACTAATATTGTTTTTCATCTAACAAAAATAATGGTTTA---------------TTATTCGAATAATTTA
droEle1 scf7180000491238:184030-184105 + TGTTCTGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATTTTTCGTTTCAGGAAGCCAAAGGCTTTAATGGTCATCTAA-AAATCATAACTCGTCGAAAAAA
droRho1 scf7180000775999:36505-36741 - TAAGATTTTGACAAG--TGTAGAATTCCTTTT--------------------------------------------------------------------TGAATATATT----GAAATG----TGTGTAGCATTACTTCTATATAT----------AAGCTTG----------------------------------------------AAGAAATAAAAATAATCATTTTTAACATCAATGTTAAACAAGTTAATTGTATATATAATAATCTTTAAA--AACTATTAAGAGCCATAATTTTGTAGATTATTTCTT----------------------------------------------TGGTATTAAAACAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAAATAATTCAAAAC------------------------G-TAACCAAAACTCGTTTAAGAAG
droFic1 scf7180000452523:251542-251824 + ATAATTTAAACATAAAGTGCAGTA-----------------------------------------------------------ATAAAAATATTTTTGTTTAAGTCTTTT----AAATCT----TTGAAATCTTTACTTTTT------------TTAACAATTA----------------------------------------------AGTGAAAGTAC-----------------------------------------------AAGTCTTTAAA--ACTT-TTTCAAAC-----------------TTTTAT----------------------------------------------TGACATTATCGCAATAATTATAACTGATTCAAACCATTGCAATGCATTGTGCAAAATAGTTTTTATAGAGTTAAACACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTA--TTAT--TTATATACAAATTTGTTAAAGTCAAAATGAATCAACATAAAATTGATAACTATTTACACAATTAGAAAA
droKik1 scf7180000302570:376767-376965 - CTAAAATTAACCTGC--AAGGATA-----------------------------------------------------------TAAAATATT---AACTAATAACCA--------------------------------------------------ATGATTA----------------------------------------------AGCCAATGAAC-------------------------------------------------------------------------------------------------------------------ATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCCTGAAAGTGAACCAATGTTTCTTCTAAAAATATAC---------------------------AAAAATGATACAATGTAAAATTGTATTTCTTT--CA--TTTTAAAAATTA--TAGT--TTTAACCAATTCTATCAAGACTTTCAAAGAACTTATCTATAT-------------------------TT
droAna3 scaffold_13335:2862033-2862096 - ATTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTTCAGGAAACGGATGAATTGGACAGACATTTAA-AAATAATTTCTAACCGTAAAAA
droBip1 scf7180000396574:457627-457708 - CTCACAAATT-----------------------------------------------------------------------T-AAAAAAATT--TTCGTTTGAACTA---------------TTT----ATTT-T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGTTTTAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTT-TTTT------------AATTAGAAG-----------------------GTTAACTAA
dp5 Unknown_group_8:7283-7354 + ACTATTTTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA----TTCATTCTAGGAGACGAAAGGGTTCAATGGTCATTTAA-GAATTTTCACTCGAGGAAAGAG
droPer2 scaffold_1538:4354-4574 + AAATCGATCA-CA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCCCTTAACA-TTTTTTTT-----------------TTCTTCCTTCATTTTGATCAAATATATATATAAAAAAAAAAAAAATTTATATTGATGAAAT--------------------------------------------------------------------------------------TTTAAAGAGTAAAAAAAAAAAAAAAAATCGG------AA--------GG-GTATATAGATATGTGTGTCCC------------------------------------------------------------------------------------------TG--AGAAAAAAAAAAATTT--TT------------TTTTTTT--------TAAAAGAATAAATGAATAGCAAA-TAATTAAAAAAAAAAAAAATAA
droWil2 scf2_1100000004959:147041-147127 + ATTTTATATATTATT--A--------------------------------------------------------------------------------------------------------TTT----AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATATTT--TATT--TTATATTTTTCTTTTTACAGTATATATGTTATAAATGGATAA---------------ACATATAATAAT
droVir3 scaffold_12970:1434700-1434881 - GTATATTGTTTTATA--TATTTTA-------------------------------------------------------------------------------------T----ACATTT----TATATATTTATACCATAT------------TTATTAATCGAAAGCCACAAAAACGATAATTCATAGAAAAAAACCGTATCT--A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTT-----------------ATGAGATTAAATTTAAA--------CA-ATATTTGTGTCTGTATG-----------------------------------------------------------------------T----------------------TA--TATTATTAATACATTATATTAA--TTGATTTTTTCTTTTC-----------------------------------------------------
droMoj3 scaffold_6540:742347-742409 + AAAACAAAAA--------------------------------------------------------------------------------------------AATTTTTTTCTTTTCACT----TATAT----A------------TAATTATTTAGAAAATTAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-TCAATAAC
droGri2 scaffold_14624:1180609-1180644 - AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATATTTAA-ATATTTTCGCTTGACAAAAAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CTAAATTCCGTCAAC--GCCAGTC-----------------------------------------------------------AAAAAAATT---GTGTTGGAGTTTATT----TAAGCT----TATAT----A------------TATTTATTTAGAAAGCCAAC-------------------C-AATGAGTAACAAGTACTTACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATAACGTATGACAAAAATGATAAGTTGGACTGCAAG--------GG-GTATATAATTGTGTACA-----------------------------------------------------------------------T----------------------TG--TGTTTACAACATATTA--TTTT--TTAAATCTTTCTTTTCAGGACGCAAAAGGAATAAATGGACATTTAA-AAATTTTAGCTCGACGAAAAAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................T---GTGTTGGAGTTTATT----TAAGCT----TATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26155.00550000002118304000000
..........................................................................................TT---GTGTTGGAGTTTATT----TAAGCT----TA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25143.00430000003118174000000
..........................................................................................TT---GTGTTGGAGTTTATT----TAAGCT----TATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27139.00390000003116181000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAGTTGGACTGCAAG--------GG-GTATA...........................................................................................................................................................................................................26136.0036000000383800140000
...........................................................................................T---GTGTTGGAGTTTATT----TAAGCT----TA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24134.0034000000276181000000
...........................................................................................T---GTGTTGGAGTTTATT----TAAGCT----TATAT----A------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28127.0027000000135180000000
.TAAATTCCGTCAAC--GCCAGTC-----------------------------------------------------------AAAAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28126.0026000000515240000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTGCAAG--------GG-GTATATAATTGTG...................................................................................................................................................................................................26118.001800000028220040000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAAAAATGATAAGTTGGACTGC..............................................................................................................................................................................................................................25114.001400000042170000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAAAAATGATAAGTTGGACTGCAA............................................................................................................................................................................................................................27112.001200000002450010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATAAATGGACATTTAA-AAATT.................25112.001200000005160000000
.TAAATTCCGTCAAC--GCCAGTC-----------------------------------------------------------AAAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27110.001000000034030000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAGTTGGACTGCAAG--------GG-GTAT............................................................................................................................................................................................................2519.00900000023040000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACGCAAAAGGAATAAATGGACATT..........................2819.00900000017010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTTGGACTGCAAG--------GG-GTATATAA........................................................................................................................................................................................................2618.00800000001220030000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGACGCAAAAGGAATAAATGGACATT..........................2918.00800000005120000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACATTTAA-AAATTTTAGCTCGACGA.....2817.00700000001040020000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAGGACGCAAAAGGAATAAATGGAC.............................2917.00700000005020000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGACAAAAATGATAAGTTGGACTGC..............................................................................................................................................................................................................................2717.00700000003040000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAAAAATGATAAGTTGGACTGCA.............................................................................................................................................................................................................................2617.00700010000060000000
.....TTCCGTCAAC--GCCAGTC-----------------------------------------------------------AAAAAAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2516.00600000012021000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGACGCAAAAGGAATAAATGGAC.............................2616.00600000001220010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATAAATGGACATTTAA-AAATTT................2616.00600000001050000000
..........................................................................................TT---GTGTTGGAGTTTATT----TAAGCT----TATAT----A------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2915.00500000002210000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAATAAATGGACATTTAA-AAATT.................2715.00500000004010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTTGGACTGCAAG--------GG-GTATATAAT.......................................................................................................................................................................................................2714.00400000000020020000
................................................................................................TGTTGGAGTTTATT----TAAGCT----TATAT----A------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.00400000000220000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAGTTGGACTGCAAG--------GG-GTATAA..........................................................................................................................................................................................................2714.00400000000020020000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAATAAATGGACATTTAA-AAATT.................2614.00400000002110000000
...................CAGTC-----------------------------------------------------------AAAAAAATT---GTGTTGGAGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.00400000002110000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTATGACAAAAATGATAAGTTGGAC.................................................................................................................................................................................................................................2713.00300000001020000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATAACGTATGACAAAAATGATAAGT......................................................................................................................................................................................................................................2813.00300000002100000000
............AAC--GCCAGTC-----------------------------------------------------------AAAAAAATT---GTGTTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300000000030000000
..................................................................................................................................................TATTTATTTAGAAAGCCAAC-------------------C-AATGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.00300000000030000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAAAAATGATAAGTTGGACTG...............................................................................................................................................................................................................................2413.00300000000020010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTGCAAG--------GG-GTATATAATTGT....................................................................................................................................................................................................2513.00300000000000030000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAGTTGGACTGCAAG--------GG-GT..............................................................................................................................................................................................................2313.00300000001110000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACGCAAAAGGAATAAATGGACATT..........................2713.00300000003000000000
.TAAATTCCGTCAAC--GCCAGTC-----------------------------------------------------------AAAAAAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.00300000001110000000
..................................................................................................................................................TATTTATTTAGAAAGCCAAC-------------------C-AATGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300000000030000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATCTTTCTTTTCAGGACGCAAAAGG........................................2813.00300000002010000000
.........................................................................................ATT---GTGTTGGAGTTTATT----TAAGCT----TA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300000002010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAGTTGGACTGCAAG--------GG-GTA.............................................................................................................................................................................................................2413.00300000002000010000
..............................................................................................................................TAT----A------------TATTTATTTAGAAAGCCAAC-------------------C-AA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000000010010000
..............C--GCCAGTC-----------------------------------------------------------AAAAAAATT---GTGTTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000000011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTCAGGACGCAAAAGGAATAAATGGA..............................2912.00200000001010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTATGACAAAAATGATAAGTTGGAC.................................................................................................................................................................................................................................2612.00200000001010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATCTTTCTTTTCAGGACGCAAA...........................................2512.00200000000020000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGATAAGTTGGACTGCAAG--------GG-GTA.............................................................................................................................................................................................................2612.00200000002000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAAAAATGATAAGTTGGACTGCAAG--------...................................................................................................................................................................................................................2812.00200000010010000000
....ATTCCGTCAAC--GCCAGTC-----------------------------------------------------------AAAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000010010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGGACATTTAA-AAATTTTAGCTC..........2712.00200000001010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--TTTT--TTAAATCTTTCTTTTCAGGA.................................................2612.00200000001010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACGCAAAAGGAATAAATGGACAT...........................2612.00200000001010000000
...........CAAC--GCCAGTC-----------------------------------------------------------AAAAAAATT---GTGTTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000001010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGATAAGTTGGACTGCAAG--------GG-G...............................................................................................................................................................................................................2612.00200000002000000000
..........................................................................................TT---GTGTTGGAGTTTATT----TAAGCT----TAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000000011000000
.TAAATTCCGTCAAC--GCCAGTC-----------------------------------------------------------AAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000002000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAATAAATGGACATTTAA-AAAT..................2512.00200000000020000000
.........................................................................................ATT---GTGTTGGAGTTTATT----TAAGCT----TATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000000020000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAAAGGAATAAATGGACATTTAA-......................2612.00200000000100010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGGACATTTAA-AAATTTTAGCTCGA........2912.00200000000020000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTGCAAG--------GG-GTATATAATTGTGTA.................................................................................................................................................................................................2812.00200000011000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGACAAAAATGATAAGTTGGACTGCA.............................................................................................................................................................................................................................2812.00200000000020000000
..........................................................................................................................................................TAGAAAGCCAAC-------------------C-AATGAGTAACAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000000002000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAAAAATGATAAGTTGGA..................................................................................................................................................................................................................................2112.00200000000020000000
.........................................................................................................................................................TTAGAAAGCCAAC-------------------C-AATGAGTAACAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000000110000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAGTTGGACTGCAAG--------GG-................................................................................................................................................................................................................2112.00200000000020000000
......................TC-----------------------------------------------------------AAAAAAATT---GTGTTGGAGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200000000020000000
.....TTCCGTCAAC--GCCAGTC-----------------------------------------------------------AAAAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000000110000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAGGACGCAAAAGGAATAAATGG...............................2712.00200000000000020000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATAACGTATGACAAAAATGATAAGTT.....................................................................................................................................................................................................................................2812.00200000000110000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGGACGCAAAAGGAATAAATG................................2512.00200000000110000000
.....................GTC-----------------------------------------------------------AAAAAAATT---GTGTTGGAGTTTATT----..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000002000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGGACATTTAA-AAATTTTAGC............2512.00200000002000000000
....................AGTC-----------------------------------------------------------AAAAAAATT---GTGTTGGAGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000001010000000
..........................................................................................TT---GTGTTGGAGTTTATT----TAAGCT----TAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000000020000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAAATGATAAGTTGGACTGCAT............................................................................................................................................................................................................................2511.00100000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATAAATGGACATTTAA-AAATTTT...............2711.00100000000010000000
..................................................................................................................................................TATTTATTTAGAAAGCCAAC-------------------C-AATGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATAAATGGACATTTAA-AAA...................2311.00100000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGACGCAAAAGGAATAAATGGACAT...........................2811.00100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACGCAAAAGGAATAAATGGAC.............................2511.00100000000010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAGGACGCAAAAGGAATAAATGGA..............................2811.00100000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGACGCAAAAGGAATAAATGG...............................2411.00100000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAGTTGGACTGCAAG--------GG-G...............................................................................................................................................................................................................2211.00100000000010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAATAAATGGACATTTAA-AAATTTT...............2811.00100000000010000000
...............................................................................................GTGTTGGAGTTTATT----TAAGCT----................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATAAGTTGGACTGCAAG--------GG-GT..............................................................................................................................................................................................................2411.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGATAAGTTGGACTGCAAG--------GG-................................................................................................................................................................................................................2411.00100000001000000000
...........CAAC--GCCAGTC-----------------------------------------------------------AAAAAAATT---GTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
.......................................................................................AAATT---GTGTTGGAGTTTATT----TAAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGACAAAAATGATAAGTTGGACTGCAA............................................................................................................................................................................................................................2911.00100000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGTGTACA-----------------------------------------------------------------------T----------------------TG--TGTTTACAACATA................................................................................2811.00100000000010000000
................................................................................................TGTTGGAGTTTATT----TAAGCT----TATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAGTTGGACTGCAAG--------GG-GTATATA.........................................................................................................................................................................................................2711.00100000000010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAGGAATAAATGGACATTTAA-AAA...................2711.00100000000000010000
...........................................................................................................................................................AGAAAGCCAAC-------------------C-AATGAGTAACAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAATAAATGGACATTTAA-AAAT..................2611.00100000001000000000
....................................................................................................................................................................................................CAAGTACTTACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATAACGTATGA....................................................................................................................................................................................................................................................2711.00100000000100000000
.........................................................................................................................................................TTAGAAAGCCAAC-------------------C-AA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATAAATGGACATTTAA-AAAT..................2411.00100000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAAAAATGATAAGTTGGACTGCAAG--------G..................................................................................................................................................................................................................2911.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAATCTTTCTTTTCAGGACGCAAA...........................................2611.00100000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGTGTACA-----------------------------------------------------------------------T----------------------TG--TGTTTACAACA..................................................................................2611.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATAAATGGACATTTAA-AAATTT................2511.00100000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATAAATGGACATTTAA-AAATTTTAGCT...........3111.00100000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTACA-----------------------------------------------------------------------T----------------------TG--TGTTTACAACATA................................................................................2411.00100000000001000000
.............................................................................................................................................................................................TGAGTAACAAGTACTTACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATA............................................................................................................................................................................................................................................................2611.00100000001000000000
.......................C-----------------------------------------------------------AAAAAAATT---GTGTTGGAGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGGACATTTAA-AAATTT................2111.00100000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGACGCAAAAGGAATAAATGGA..............................2511.00100000000000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGATAAGTTGGACTGCAAG--------GG-GTATA...........................................................................................................................................................................................................2811.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGACGCAAAAGGAATAAATGGACATT..........................3011.00100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATAAATGGACATTTAA-AAATT.................2411.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATAACGTATGACAAAAATGATAAGTT.....................................................................................................................................................................................................................................2911.00100000010000000000
.....................................................................................AAAAATT---GTGTTGGAGTTTATT----TAAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
........................................................................................................................................................TTTAGAAAGCCAAC-------------------C-AATGAGTAACAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
.....................................................................................AAAAATT---GTGTTGGAGTTTATT----TAAGCT----................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTTTTCAGGACGCAAAAG.........................................2111.00100000000000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAG--------GG-GTATATAATTGTGTACA-----------------------------------------------------------------------T----------------------.................................................................................................2511.00100000000001000000
......................................................................................................................................................TATTTAGAAAGCCAAC-------------------C-AATGAGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
...........................................................................................T---GTGTTGGAGTTTATT----TAAGCT----T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTATGACAAAAATGATAAGTTGGACTGC..............................................................................................................................................................................................................................2911.00100000000010000000
..........................................................................................TT---GTGTTGGAGTTTATT----TAAGCT----TATAA----.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTGCAAG--------GG-GTATATAATTG.....................................................................................................................................................................................................2411.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTTTCTTTTCAGGACGCAAAAGGA.......................................2711.00100000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGAATAAATGGACATTTAA-AAATT.................2811.00100000000010000000
......TCCGTCAAC--GCCAGTC-----------------------------------------------------------AAAAAAATT---GTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCAAAAGGAATAAATGGACATT..........................2511.00100000000010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------GG-GTATATAATTGTGTACA-----------------------------------------------------------------------T----------------------TG--TG...........................................................................................2511.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATGATAAGTTGGACTGCAAG--------GG-GTA.............................................................................................................................................................................................................2911.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATGATAAGTTGGACTGCAAG--------GG-G...............................................................................................................................................................................................................2711.00100000001000000000
.......................................................................................................................T----TATAT----A------------TATTTATTTAGAAAGCCAAC-------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
........................................................................................AATT---GTGTTGGAGTTTATT----..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
...........................................................................................T---GTGTTGGAGTTTATT----TAAGCT----TATAT----A------------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGATAAGTTGGACTGCAAG--------GG-G...............................................................................................................................................................................................................2511.00100000000010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA--TTTT--TTAAATCTTTCTTTTCAGGA.................................................2711.00100000000010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCTTTTCAGGACGCAAAAGGAA......................................2611.00100000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAATGATAAGTTGGACTGCAAG--------...................................................................................................................................................................................................................2511.00100000000000001000
...................................................................................................................................................................................................ACAAGTACTTACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATAACGTATGA....................................................................................................................................................................................................................................................2811.00100000001000000000
.......................................................................................................................................................ATTTAGAAAGCCAAC-------------------C-AATGAGTAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAAAGGAATAAATGGACATTTAA-A.....................2711.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTTTCTTTTCAGGACGCAAAAGGA.......................................2811.00100000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTATGACAAAAATGATAAGT......................................................................................................................................................................................................................................2311.00100000000001000000
..................................................................................................................................................................................................AACAAGTACTTACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATAACGTA.......................................................................................................................................................................................................................................................2611.00100000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTA--TTTT--TTAAATCTTTCTTTTCAGGA.................................................2911.00100000001000000000
................................................................................................................................T----A------------TATTTATTTAGAAAGCCAAC-------------------C-AA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTCAGGACGCAAAAGGAATAAATG................................2811.00100000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGTATGACAAAAATGATAAGTT.....................................................................................................................................................................................................................................2511.00100010000000000000
........................................................................................................................................................................................................TACTTACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATAACGTATGACAAAAA..............................................................................................................................................................................................................................................2911.00100000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATCTTTCTTTTCAGGACGCAAAAGGA.......................................2911.00100000010000000000
...................CAGTC-----------------------------------------------------------AAAAAAATT---GTGTTGGAGTTTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGGACATTTAA-AAATTTTAGCTCGACGA.....3211.00100000000010000000
..............................................................................................................................TAT----A------------TATTTATTTAGAAAGCCAAC-------------------C-A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAGGACGCAAAAGGAATAAATGGACA............................3011.00100000000100000000
....ATTCCGTCAAC--GCCAGTC-----------------------------------------------------------AAAAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGTATGACAAAAATGATAAGTTGGA..................................................................................................................................................................................................................................2811.00100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTCAGGACGCAAAAGGAATAAATGGA..............................3011.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACATTTAA-AAATTTTAGCTCGACGC.....2811.00100000000000010000
...........................................................................................................................................................................................................TTACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATAACGTATG.....................................................................................................................................................................................................................................................1911.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAAAAATGATAAGTTGGAC.................................................................................................................................................................................................................................2211.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATAACGTATGACAAAAATGATAAGTTGGA..................................................................................................................................................................................................................................3111.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACAAAAATGATAAGTTGG...................................................................................................................................................................................................................................2111.00100000000010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAGGACGCAAAAGGAATAAATG................................2611.00100000000100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGATAAGTTGGACTGCAAG--------GG-GTAT............................................................................................................................................................................................................2811.00100000000000010000
..........................................................................................................TATT----TAAGCT----TATAT----A------------TATTTATTTAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
..........................................................................................................................................................TAGAAAGCCAAC-------------------C-AATGAGTAACAAGTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTTGGACTGCAAG--------GG-GTATATA.........................................................................................................................................................................................................2511.00100000001000000000
.................................................................................................................................................................................................TAACAAGTACTTACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATAACGTA.......................................................................................................................................................................................................................................................2711.00100000001000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGATAAGTTGGACTGCAAG--------GG-GTAT............................................................................................................................................................................................................2711.00100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGACATTTAA-AAATTTTAGCTCGACG......2911.00100000001000000000
..................................................................................................................TAAGCT----TATAT----A------------TATTTATTTAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACGCAAAAGGAATAAATGGACAT...........................2711.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGACGCAAAAGGAAA.....................................1830.33100000001000000000
droSec2
CTAAATTCCGTCAAC--GCCAGTCTTT--TTT-CGACTGCTCCATTGAAAGCTATATACCGTACTCGTCCCAGGTTTATCAA-ACAGAAATT---GTGTTGGAGTTTATT----TAAGCT----TATAT----A------------TATTTCTTTAGAAAGCCAAC-------------------C-AATGAGTAACAAGTACTTACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATAACGTATGACAAAAATGATAAGTTGGACTGCAAG--------GG-GTATATAATTGTGTACA-----------------------------------------------------------------------T----------------------TG--TGTTTACAACATATTA--TTTT--TTAAATCTTTCTTTTCAGGACGCAAAAGAAATAAATGGACATTTAA-AAATTTTAGCTCGACGAAAAAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................TT--TTT-CGACTGCTCCATTGAAAGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
....................................................TATATACCGTACTCGTCCCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
dm3
TTAAATTCCGTCAAT--GCTAGTCTTTTTTTTTGGACTGTTCCATTGAGAGCTATATGCCGTAGTCGTCCCAGGTTTATCAA-ACAGAAATT---ATGTTGGAGTTTATTTAGTTAAACT----TATAT----T------------TATTTATTTAGAAAGCCCAT-------------------C-AACGAGTAAAAAGTACTTGCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAAAACATATTACCAAAATGATAAGTTGAACTGCAAA--------G------------------------------------------------------------------------------------------A-------------TATATT---TC--TGTGTACAACATATTA--TTTT--TTAAATCTTTCTTTTCAGGACGCAAAAGGAATAAATGGAAATTTAC-AAATTTTAGCTCGACGAAAAAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
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OSC		V145
S2		V146
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......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAAAATGATAAGTTGAACTGCA.............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAAAATGATAAGTTGAACTGCAAA--------G------------------------------------------------------------------------------------------........................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................T-------------------C-AACGAGTAAAAAGTACTTGCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AGTCGTCCCAGGTTTATCAA-A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................TGCCGTAGTCGTCCCAGGTTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
...........................TTTTTTGGACTGTTCCATTGAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTTTTTTTGGACTGTTCCATTGAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CATTGAGAGCTATATGCCGTAGTCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TTTTTTTGGACTGTTCCATTGAGAGCTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TAGTCGTCCCAGGTTTATCAA-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................T---ATGTTGGAGTTTATTTAGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................T-------------------C-AACGAGTAAAAAGTACTTGCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T..................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTTTTTTTTGGACTGTTCCATTGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTTTGGACTGTTCCATTGAGAGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--TTTT--TTAAATCTTTCTTTTCA....................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................ATGTTGGAGTTTATTTAGTTAAACT----TA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--TTAAATCTTTCTTTTCAGGACGCA.............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TATGCCGTAGTCGTCCCAGGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..AAATTCCGTCAAT--GCTAGTCTTTTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AAATTCCGTCAAT--GCTAGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGATAAGTTGAACTGCAAA--------G------------------------------------------------------------------------------------------A-------------T.........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ATTCCGTCAAT--GCTAGTCTTTTTTTTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGGACGCAAAAGGAATAAATGG...............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TTTTTGGACTGTTCCATTGAGAGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTTGAACTGCAAA--------G------------------------------------------------------------------------------------------A-------------..........................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACTGCAAA--------G------------------------------------------------------------------------------------------A-------------TATATT---TC--TGTG.........................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAATTTAC-AAATTTTAGCTCGAC.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ATTCCGTCAAT--GCTAGTCTTTTTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TTTTTTTGGACTGTTCCATTGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATTA--TTTT--TTAAATCTT............................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TCCATTGAGAGCTATATGCCGTAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................TCTTTTTTTTTGGACTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTTTCTTTTCAGGACGCAAAAGGA.......................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TCCCAGGTTTATCAA-ACAGAAATT---ATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TTTGGACTGTTCCATTGAGAGCTATATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................C-AACGAGTAAAAAGTACTTGCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T..................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................AATT---ATGTTGGAGTTTATTTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................TAGTCGTCCCAGGTTTATCAA-AC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AATTCCGTCAAT--GCTAGTCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAAAACATATTACCAAAATGATAA........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAGTTGAACTGCAAA--------G------------------------------------------------------------------------------------------A-------------TATAT.....................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCTTTTCAGGACGCAAAAGGA.......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAAATTCCGTCAAT--GCTAGTCTTTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................GAGCTATATGCCGTAGTCGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAGTTGAACTGCAAA--------G------------------------------------------------------------------------------------------A-------------TATATT---.................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAA--------G------------------------------------------------------------------------------------------A-------------TATATT---TC--TGTG.........................................................................................2111.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACTGCAAA--------G------------------------------------------------------------------------------------------A-------------TATATT---TC--TGTGT........................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAAATTCCGTCAAT--GCTAGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAAATTCCGTCAAT--GCTAGTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TTAAATCTTTCTTTTCAGGACGCA.............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTTTGGACTGTTCCATTGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................TTTTTTTTTGGACTGTTCCATTGAGAGCATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-AAATTTTAGCTCGACGAAAA..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAATGGAAATTTAC-AAATT.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAATTTAC-AAATTTTAGCTCGACGA.....2811.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATCTTTCTTTTCAGGA.................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TTGGACTGTTCCATTGAGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TATATGCCGTAGTCGTCCCAGGTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTACCAAAATGATAAGTTGAACTGC..............................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TACTTGCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAAAACATATTACCAAAA..............................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAATGATAAGTTGAACTGCAA............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGATAAGTTGAACTGCAAA--------G------------------------------------------------------------------------------------------A-------------TA........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC-AAATTTTAGCTCGAC.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TGTTCCATTGAGAGCTATATGCCGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CATTGAGAGCTATATGCCGTAGTCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TGTTGGAGTTTATTTAGTTAAACT----TA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATAAGTTGAACTGCAAA--------G------------------------------------------------------------------------------------------A-------------TATATT---.................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAATAAATGGAAATTTAC-AAATTT................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATCTTTCTTTTCAGGACGCAAAAGGA.......................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TGTTCCATTGAGAGCTATATGCCGTAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TTGAGAGCTATATGCCGTAGTCGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTTTGGACTGTTCCATTGAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TATCAA-ACAGAAATT---ATGTTGGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTCAGGACGCAAAAGGAATA....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................CAGAAATT---ATGTTGGAGTTTATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................ATT---ATGTTGGAGTTTATTTAGTTAAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGGACGCAAAAGGAATA....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................TATGCCGTAGTCGTCCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAGTTGAACTGCAAA--------G------------------------------------------------------------------------------------------A-------------T.........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGATAAGTTGAACTGCAAA--------G------------------------------------------------------------------------------------------A-------------..........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATGATAAGTTGAACTGCAAA--------G------------------------------------------------------------------------------------------A-------------..........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGAACAT------------------------------------------------------------------------------------T---GT-TTGAAGTTTATTTTTTTAAACACATATATGT----A------------TATTTATTTTAAAAACCGAC-------------------C-ATCGAGTAAAGAGTATTTATG--AGCGG---------------------------------------------------------------------------------------------------------AAGCAAAAGAACGGACATG-----------------------------------------------------------------------------------------------------------------------TT-AAAACATCTTACCGAAATGATAAGTTGGACTGGAAG--------GGGGCATATAC-----------------------------------TAACAGCGTAA---------------------------TAAACCGC----------------------TATT-TTGTACAAAAAATTGG-TTTTTTAAATATCTTTCTTTTCAGGAGACAAAAGGAATTAATGGACATATAA-AAGTTTTAACTCGCCGAAAAAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-AAAACATCTTACCGAAATGATAAGT......................................................................................................................................................................................................................................2711.0011000000
droYak3
CTAAATTCCGTTAGTTAGCTAGTCTTT--TTC-CGACTGTTCCAATGGGAGCCATATGCTATAGTCGTCCCAGATGTATCAAAATAAAAATT---ATGTAGGAGTTTATTCAGTTAAACT----TATAA----A------------TATTTATTTAAAGAGCCGAC-------------------C-ATCAAGTAAGAATTATTTATG--AACGG---------------------------------------------------------------------------------------------------------AAACAAACGA---------------------------------------------------------------------------------------------------------------------------------------------ACGGAAATG----------------------------------------------------------------------------------------------------------TATTGTAACGC----------------------TATT-TTGTACAACAAACA---TTTT-TTAATATCTTTC-TCTTAGGGTGCAAAAGGAATTAATGGACACTTAA-AAATTTTAACTCGACGAAAAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGAAATG----------------------------------------------------------------------------------------------------------TATTGTAACGC----------------------.................................................................................................2011.00110000000000
droEug1
GAAGACTTTC--AAT-------------------------------------------------------------------------------------TCAGTTG---------------ATA----ACAC-T-------------------------------------------------------------ATATTGTCT-CATATTGTAAAGTAC-----------------------------------------------AATCATGTACAATAGAT-TTTAATGT-----------------TTCCGTGTTAATTTGGGTAACGAATATG------------------------------------------------------------------------------------------------------------------------------------TTAAAAGGAATAAGTTGAAATT-AAT--------CG-TGACAAAATAACATATT-----------------------------------------------------------------------T----------------------AA--TGTTTACTTGGGAATA--TATT--GCAGACCAATCTTTTTAAAACTG--ATAAAATGGGTAA-------------------TTGCTTGAAAATSizeHit CountTotal NormTotal
No Reads
droBia1
TACTTTAGCCTAAAT--A--------------------------------------------------------------------------------------------------------TAA----AATTA------------TATTTAGTTGAAGGTCCG-----------------------TATAAATCAAGAGTACTT-CG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTTTAAGGTACTACA----------------------------------------------------------------------------------------CATTAAATCAAATTAATGAAATTGTAATGCTACGT----------------------TG--TCTT---------------------AATAATATTTGTTTCAGAACACGAAAGGATTTAATGCTCATTTAA-GAACTAAAGCTCGCCGAAAAAASizeHit CountTotal NormTotal
No Reads
droTak1
CTTTTAGAAAACTTA--TTTTG-----------------------------------------------------------T-ATAGAAATT--GTTGTTGGAACTGACT----TACACT----TTTAC----A------------CTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACGTTTACAACGTTTGCAACGCAATTGAACATCCTATTATTTTTTGTGACAAACAATATAAGACAATAACATC-AATTGTTTAACAAAGAAAAACT---------------------------------------------------------AATTATATGAATATATTATAAATGTATTA---------------------------------------------TTA--AATT--ACTAATATTGTTTTTCATCTAACAAAAATAATGGTTTA---------------TTATTCGAATAATTTASizeHit CountTotal NormTotal
No Reads
droEle1
TGTTCTGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATTTTTCGTTTCAGGAAGCCAAAGGCTTTAATGGTCATCTAA-AAATCATAACTCGTCGAAAAAASizeHit CountTotal NormTotal
No Reads
droRho1
TAAGATTTTGACAAG--TGTAGAATTCCTTTT--------------------------------------------------------------------TGAATATATT----GAAATG----TGTGTAGCATTACTTCTATATAT----------AAGCTTG----------------------------------------------AAGAAATAAAAATAATCATTTTTAACATCAATGTTAAACAAGTTAATTGTATATATAATAATCTTTAAA--AACTATTAAGAGCCATAATTTTGTAGATTATTTCTT----------------------------------------------TGGTATTAAAACAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAAATAATTCAAAAC------------------------G-TAACCAAAACTCGTTTAAGAAGSizeHit CountTotal NormTotal
No Reads
droFic1
ATAATTTAAACATAAAGTGCAGTA-----------------------------------------------------------ATAAAAATATTTTTGTTTAAGTCTTTT----AAATCT----TTGAAATCTTTACTTTTT------------TTAACAATTA----------------------------------------------AGTGAAAGTAC-----------------------------------------------AAGTCTTTAAA--ACTT-TTTCAAAC-----------------TTTTAT----------------------------------------------TGACATTATCGCAATAATTATAACTGATTCAAACCATTGCAATGCATTGTGCAAAATAGTTTTTATAGAGTTAAACACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTA--TTAT--TTATATACAAATTTGTTAAAGTCAAAATGAATCAACATAAAATTGATAACTATTTACACAATTAGAAAASizeHit CountTotal NormTotal
No Reads
droKik1
CTAAAATTAACCTGC--AAGGATA-----------------------------------------------------------TAAAATATT---AACTAATAACCA--------------------------------------------------ATGATTA----------------------------------------------AGCCAATGAAC-------------------------------------------------------------------------------------------------------------------ATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCCTGAAAGTGAACCAATGTTTCTTCTAAAAATATAC---------------------------AAAAATGATACAATGTAAAATTGTATTTCTTT--CA--TTTTAAAAATTA--TAGT--TTTAACCAATTCTATCAAGACTTTCAAAGAACTTATCTATAT-------------------------TTSizeHit CountTotal NormTotal
No Reads
droAna3
ATTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTTCAGGAAACGGATGAATTGGACAGACATTTAA-AAATAATTTCTAACCGTAAAAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CTCACAAATT-----------------------------------------------------------------------T-AAAAAAATT--TTCGTTTGAACTA---------------TTT----ATTT-T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTGTTTTAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTT-TTTT------------AATTAGAAG-----------------------GTTAACTAASizeHit CountTotal NormTotal
No Reads
dp5
ACTATTTTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA----TTCATTCTAGGAGACGAAAGGGTTCAATGGTCATTTAA-GAATTTTCACTCGAGGAAAGAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
AAATCGATCA-CA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCCCTTAACA-TTTTTTTT-----------------TTCTTCCTTCATTTTGATCAAATATATATATAAAAAAAAAAAAAATTTATATTGATGAAAT--------------------------------------------------------------------------------------TTTAAAGAGTAAAAAAAAAAAAAAAAATCGG------AA--------GG-GTATATAGATATGTGTGTCCC------------------------------------------------------------------------------------------TG--AGAAAAAAAAAAATTT--TT------------TTTTTTT--------TAAAAGAATAAATGAATAGCAAA-TAATTAAAAAAAAAAAAAATAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG-GTATATAGATATGTGTGTCC............................................................................................................................................................................................22200.102020000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAATAAATGAATAGCAAA-TAAT..................26200.051010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTAAAAAAAAAAAAAA..........................................................................................................................................................................................................................................18200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTAAAAAAAAAAAAAAA.........................................................................................................................................................................................................................................19200.051100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAAAAAAAAAAAAAA.......................................................................................................................................................................................................................................19200.051010000
droWil2
ATTTTATATATTATT--A--------------------------------------------------------------------------------------------------------TTT----AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATATTT--TATT--TTATATTTTTCTTTTTACAGTATATATGTTATAAATGGATAA---------------ACATATAATAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................A--------------------------------------------------------------------------------------------------------TTT----AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATATTT--TATT--T....................................................................19110.09100010
droVir3
GTATATTGTTTTATA--TATTTTA-------------------------------------------------------------------------------------T----ACATTT----TATATATTTATACCATAT------------TTATTAATCGAAAGCCACAAAAACGATAATTCATAGAAAAAAACCGTATCT--A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTT-----------------ATGAGATTAAATTTAAA--------CA-ATATTTGTGTCTGTATG-----------------------------------------------------------------------T----------------------TA--TATTATTAATACATTATATTAA--TTGATTTTTTCTTTTC-----------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
AAAACAAAAA--------------------------------------------------------------------------------------------AATTTTTTTCTTTTCACT----TATAT----A------------TAATTATTTAGAAAATTAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-TCAATAACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATATTTAA-ATATTTTCGCTTGACAAAAAAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 05:19 AM