ID:

dsi_343

 Coordinate:

node_105604:2120-2191 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.7 -17.5 -17.3

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
ACCORD2_I-intLTRGypsy-
mature
  1. node_44918:382-406 +
  2. node_133965:116-140 -
  3. node_41706:65-89 -
  4. dsi_343  node_105604:2167-2191 -
star
  1. node_86755:837-860 -
  2. node_44918:429-452 +
  3. node_20520:20-43 +
  4. node_41705:134-157 -
  5. node_41706:19-42 -
  6. dsi_343  node_105604:2121-2144 -

Sense Strand Reads

AAAAATAAATAAAAAAAAAATAAATAATAATAAATAAATAACTGTAAGTTGTGTGATTAACGACCGAATATGTGCACATCAATCGCTGATAAGACACCGGGATCGTTTTCACTTAAAAATTTACATGAACACAAATTTTTTTAACAAATACAGAACTTGCTGCGCAGGAGGT
***********************************.......((((((((..((((..(((((((.....(((....((((.....))))...)))...)).))))).)))).....))))))))...........************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 M053
female body
 O001
Testis
 M023
head
 M024
male body		 GSM343915
embryo
 M025
embryo
..................................................GTGTGATTAACGACCGAATATGTGC................................................................................................. 25 0 4 124.00 496 341 98 18 14 1 3 0 4 16 0 0 1 0
..................................................GTGTGATTAACGACCGAATATGTG.................................................................................................. 24 0 11 75.64 832 360 307 98 45 15 3 1 3 0 0 0 0 0
..................................................GTGTGATTAACAACCGAATATGTGC................................................................................................. 25 1 4 63.25 253 57 169 20 5 2 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATGT................................................................................................... 23 0 11 21.09 232 43 37 14 8 19 104 3 4 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATGTGCA................................................................................................ 26 0 4 17.50 70 37 9 3 0 16 0 5 0 0 0 0 0 0
.................................................TGTGTGATTAACGACCGAATATGTG.................................................................................................. 25 0 10 9.60 96 25 11 34 21 0 4 0 1 0 0 0 0 0
..................................................GTGTGATTAACAACCGAATATGTGCA................................................................................................ 26 1 4 8.50 34 2 18 6 0 7 0 1 0 0 0 0 0 0
.................................................TGTGTGATTAACGACCGAATATGTGC................................................................................................. 26 0 4 7.00 28 23 1 1 0 0 0 0 3 0 0 0 0 0
..................................................GTGTGATTAACAACCGAATATGTG.................................................................................................. 24 1 11 4.64 51 10 21 13 4 1 0 2 0 0 0 0 0 0
...................................................TGTGATTAACGACCGAATATGTGC................................................................................................. 24 0 4 4.25 17 14 1 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................TTTTTTTAACAAATACAGAACTTGC............ 25 0 1 4.00 4 1 1 0 2 0 0 0 0 0 0 0 0 0
.................................................TGTGTGATTAACAACCGAATATGTGC................................................................................................. 26 1 4 4.00 16 4 10 0 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TTTTAACAAATACAGAACTTGCTGCGC....... 27 0 1 3.00 3 2 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTTCACTTAAAAATTTACATGAACA......................................... 26 0 5 2.60 13 6 0 0 4 3 0 0 0 0 0 0 0 0
.....................................................TGATTAACGACCGAATATGTGC................................................................................................. 22 0 4 2.50 10 8 0 0 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TTTAACAAATACAGAACTTGCTGCGC....... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................ACATCAATCGCTGATGAGACACCGGGAT..................................................................... 28 1 3 2.00 6 1 4 0 0 0 1 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATGTGCAC............................................................................................... 27 0 4 2.00 8 1 0 0 0 6 1 0 0 0 0 0 0 0
...........................................................................ACATCAATCGCTGATAAGACACCGG........................................................................ 25 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0
..................................TAAATAACTGTAAGTTGTGTGATTAACGA............................................................................................................. 29 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACAACCGAATATGTGCAC............................................................................................... 27 1 4 1.75 7 0 0 0 0 4 0 3 0 0 0 0 0 0
.........................................................................................................TTTTCACTTAAAAATTTACATGAAC.......................................... 25 0 5 1.60 8 4 0 1 1 2 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACAACCGAATATGTGCT................................................................................................ 26 2 4 1.25 5 4 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATG.................................................................................................... 22 0 11 1.09 12 2 2 1 1 4 1 0 1 0 0 0 0 0
.......................................................................................................................................TTTTTTTAACAAATACAGAACTTGCT........... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TAACAAATACAGAACTTGCTGCGCAGGAAA. 30 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATGTGCAT............................................................................................... 27 1 4 1.00 4 0 0 0 0 4 0 0 0 0 0 0 0 0
..............................TAAATAAATAACTGTAAGTTGTGTGA.................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TAACAAATACAGAACTTGCTGCGCA...... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TCAATCGCTGATAAGACACCGG........................................................................ 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TTTTAACAAATACAGAACTTGCTGCGCA...... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AATTTTTTTAACAAATACAGAACT............... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................TCTGTAAGTTGTGTGATTTA................................................................................................................ 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
......................................TAACTGTAAGTTGTGTGATTAACGACC........................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TAACAAATACAGAACTTGCTGCGCAGG.... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................ACATCAATCGCTGATAAGACACC.......................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................ATAACTGTAAGTTGTGTGATTAACGACCGA......................................................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TTAACAAATACAGAACTTGCTGCGCAG..... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................TTGTGATTAACGACCGAATATGTGC................................................................................................. 25 1 4 1.00 4 3 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TAACAAATACAGAACTTGCTGCGCAGGA... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................TTTTTTAACAAATACAGAACTTGC............ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TTTTTTAACAAATACAGAACTTGCTGCGC....... 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACAACCGAATATGTGCACA.............................................................................................. 28 1 4 1.00 4 0 0 0 0 1 0 3 0 0 0 0 0 0
.................................................................................................................................CACAAATTTTTTTAACAAATACAGAACT............... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................TTTTTAACAAATACAGAACTTGCTGCGC....... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TGTGATTAACGACCGAATATGTG.................................................................................................. 23 0 11 0.91 10 7 1 0 2 0 0 0 0 0 0 0 0 0
.................................................................................................CGGGATCGTTTTCACTTAAAAATT................................................... 24 0 6 0.83 5 1 0 4 0 0 0 0 0 0 0 0 0 0
......................................................................................................TCGTTTTCACTTAAAAATTTACATGAA........................................... 27 0 5 0.80 4 0 0 0 1 0 0 0 3 0 0 0 0 0
...........................................................................................................TTCACTTAAAAATTTACATGAACACA....................................... 26 0 5 0.80 4 0 0 1 0 2 0 0 1 0 0 0 0 0
...........................................................................................................TTCACTTAAAAATTTACATGAACACAAA..................................... 28 0 5 0.80 4 1 2 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTTCACTTAAAAATTTACATGAACAC........................................ 27 0 5 0.80 4 1 0 0 0 3 0 0 0 0 0 0 0 0
.................................................TGTGTGATTAACAACCGAATATGTGCA................................................................................................ 27 1 4 0.75 3 0 0 0 1 1 0 1 0 0 0 0 0 0
................................................TTGTGTGATTAACGACCGAATATGTGC................................................................................................. 27 0 4 0.75 3 2 0 1 0 0 0 0 0 0 0 0 0 0
.................................................TGTGTGATTAACGACCGAATATGTGCA................................................................................................ 27 0 4 0.75 3 0 1 0 1 0 0 1 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATGTGCT................................................................................................ 26 1 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0 0
..........................................TGTAAGTTGCGTGATTAACGACCGAA........................................................................................................ 26 1 4 0.75 3 2 0 0 1 0 0 0 0 0 0 0 0 0
..................................................TTGTGATTAACAACCGAATATGTGC................................................................................................. 25 2 4 0.75 3 1 1 1 0 0 0 0 0 0 0 0 0 0
...................................................TGTGATTAACAACCGAATATGTGC................................................................................................. 24 1 4 0.75 3 1 1 0 1 0 0 0 0 0 0 0 0 0
..................................................GGGTGATTAACGACCGAATATGTGC................................................................................................. 25 1 4 0.75 3 1 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................CCGAATATGTGCACATCAATCGCTGA................................................................................... 26 0 4 0.75 3 0 2 0 0 0 1 0 0 0 0 0 0 0
................................................TTGTGTGATTAACGACCGAATATGTG.................................................................................................. 26 0 9 0.67 6 2 2 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................TCACTTAAAAATTTACATGAACACA....................................... 25 0 5 0.60 3 0 1 0 0 1 1 0 0 0 0 0 0 0
.............................................................................................................CACTTAAAAATTTACATGAACACAAA..................................... 26 0 5 0.60 3 1 2 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATAT..................................................................................................... 21 0 11 0.55 6 0 0 0 0 4 0 2 0 0 0 0 0 0
..................................................GTGTGATTAACAACCGAATATGTGCAT............................................................................................... 27 2 4 0.50 2 0 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................TGATTAACGACCGAATATGTGCACA.............................................................................................. 25 0 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0 0 0
..................................................GTGTGATCTACGACCGAATATGTGCA................................................................................................ 26 2 4 0.50 2 0 0 0 0 0 0 2 0 0 0 0 0 0
................................................................CGAATATGTGCACATCAATCGCTGA................................................................................... 25 0 4 0.50 2 0 1 0 1 0 0 0 0 0 0 0 0 0
..........................................TGTAAGTTGCGTGATTAACGACCGAATA...................................................................................................... 28 1 4 0.50 2 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................GAATATGTGCACATCAATCGCTG.................................................................................... 23 0 4 0.50 2 0 0 0 0 0 0 0 0 0 2 0 0 0
..................................................GTGTGATTAACAACCGAATATGT................................................................................................... 23 1 11 0.45 5 0 0 0 2 3 0 0 0 0 0 0 0 0
.....................................................TGATTAACGACCGAATATGTG.................................................................................................. 21 0 18 0.44 8 6 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCACTTAAAAATTTACATGAACACAAATT................................... 30 0 5 0.40 2 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................TATGTGCACATCAATCGCTGA................................................................................... 21 0 5 0.40 2 0 1 0 0 0 0 0 0 0 1 0 0 0
......................................................................................................TCGTTTTCACTTAAAAATTTACATGAACA......................................... 29 0 5 0.40 2 0 0 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................TTTCACTTAAAAATTTACATGAAC.......................................... 24 0 5 0.40 2 1 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................TCGTTTTCACTTAAAAATTTACATGAAC.......................................... 28 0 5 0.40 2 0 0 0 1 0 0 0 1 0 0 0 0 0
............................................................................................................TCACTTAAAAATTTACATGAACACAAA..................................... 27 0 5 0.40 2 0 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCACTTAAAAATTTACATGAAC.......................................... 22 0 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TAAAAATTTACATGAACACAAATTTT................................. 26 0 5 0.40 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.................................................TGTGTGATTAACAACCGAATATGTG.................................................................................................. 25 1 10 0.40 4 1 1 1 1 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATGTT.................................................................................................. 24 1 11 0.36 4 0 0 0 1 2 1 0 0 0 0 0 0 0
..................................................GTGTGATTAAAGACCGAATATGTG.................................................................................................. 24 1 11 0.36 4 2 0 1 0 0 0 1 0 0 0 0 0 0
..........................................TGTAAGTTGTGTGATTAACAACCGAA........................................................................................................ 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACCGGGATCGTTTTCACTTAAAAATT................................................... 26 0 6 0.33 2 0 0 2 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACC........................................................................................................... 15 0 12 0.33 4 0 0 0 0 0 4 0 0 0 0 0 0 0
...........................................................................ACATCAATCGCTGATGAGACACCGGATT..................................................................... 28 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................TGTGTGATTAACGACCGAATATGT................................................................................................... 24 0 10 0.30 3 2 0 0 0 0 1 0 0 0 0 0 0 0
......................................................GATTAACGACCGAATATGT................................................................................................... 19 0 18 0.28 5 0 0 0 0 0 5 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATA...................................................................................................... 20 0 11 0.27 3 0 1 2 0 0 0 0 0 0 0 0 0 0
..........................................................AACGACCGAATATGTGC................................................................................................. 17 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATGAGC................................................................................................. 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAAGGACCGAATATGTGC................................................................................................. 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATGTCC................................................................................................. 25 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................TGCGATTAACGACCGAATATGTGC................................................................................................. 24 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................TTAACGACCGAATATGTGCT................................................................................................ 20 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATAGGTGC................................................................................................. 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................GGACCGAATATGTGCACATCAATCGCTGA................................................................................... 29 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACAACCGGATATGTGC................................................................................................. 25 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGGGATTAACGACCGAATATGTGC................................................................................................. 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATGTGCCT............................................................................................... 27 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAATAACCGAATATGTGC................................................................................................. 25 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATGTGCACA.............................................................................................. 28 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTGACAACCGAATATGTGC................................................................................................. 25 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................GACCGAATATGTGCACATCAATCG....................................................................................... 24 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................CCGAATATGTGCACATCAATCGCG..................................................................................... 24 1 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................TGAATAACGACCGAATATGTGC................................................................................................. 22 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................TGTGATCTACGACCGAATATGTGC................................................................................................. 24 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................TGATTAACAACCGAATATGTGC................................................................................................. 22 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GGGTGATTAACAACCGAATATGTGC................................................................................................. 25 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAAGAACCGAATATGTGC................................................................................................. 25 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACTGAATATGTGC................................................................................................. 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACAACCGAATATGTGCC................................................................................................ 26 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................CCGAATATGTGCACATCAATCGCT..................................................................................... 24 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................GTGTGATTAACAACCGAATAGGTGC................................................................................................. 25 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATGTTCT................................................................................................ 26 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGGGATTAACAACCGAATATGTGC................................................................................................. 25 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................ATGTGATTAACAACCGAATATGTGC................................................................................................. 25 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................TGTGTGATTAACAACCGAATATGTGCT................................................................................................ 27 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAGCAACCGAATATGTGC................................................................................................. 25 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGATTAACATCCGAATATGTGC................................................................................................. 25 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATGCGC................................................................................................. 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATGTTC................................................................................................. 25 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................ACCGAATATGTGCACATCAATCGCTG.................................................................................... 26 0 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................GGGTGATTAACGACCGAATATGTG.................................................................................................. 24 1 17 0.24 4 3 1 0 0 0 0 0 0 0 0 0 0 0
................................................TTGTGTGATTAACGACCGAATATGT................................................................................................... 25 0 9 0.22 2 0 0 0 1 0 1 0 0 0 0 0 0 0
...........................................................................................................TTCACTTAAAAATTTACATGAACACAA...................................... 27 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................CACTTAAAAATTTACATGAACACAAATT................................... 28 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GACTTAAAAATTTACATGAACACAAAT.................................... 27 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TGACTTAAAAATTTACATGAACACAAA..................................... 27 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCACTTAAAAATTTACATGAACAC........................................ 25 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................TCGTTTTCACTTAAAAATTTACATGA............................................ 26 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................CACTTAAAAATTTACATGAACACAAATTT.................................. 29 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................CACTTAAAAATTTACATGAACACAAAT.................................... 27 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCACTTAAAAATTTACATGAACACAAAT.................................... 29 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTTCACTTAAAAATTTACATGAACACA....................................... 27 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CGTTTTCACTTAATAATTTACATGAA........................................... 26 1 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................TCACTTAAAAATTTACATGAACACAAAT.................................... 28 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................TAAGTTGTGTGATTAACG.............................................................................................................. 18 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................TAAAAATTTACATGAACACAA...................................... 21 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................GCACATCAATCGCTGA................................................................................... 16 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................TATGTGCACATCAATCGC...................................................................................... 18 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................TGTGTGATTAACGACCGAATATG.................................................................................................... 23 0 10 0.20 2 0 0 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................TCACTTAAAAATTTACATGAACACAA...................................... 26 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCACTTAAAAATTTACATGAACA......................................... 24 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................TTTGATTAACAACCGAATATGTGC................................................................................................. 24 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTTTGATTAACGACCGAATATGTGC................................................................................................. 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................AGTGTGATTAACAACCGAATATGTGC................................................................................................. 26 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................GACCGAATATGTGCACA.............................................................................................. 17 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................TCACTTAAAAATTTACATGAACACAAATT................................... 29 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTTCACTTAAAAATTTACATGAA........................................... 24 0 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................ACATCAATCGCTGATAAG............................................................................... 18 0 16 0.19 3 1 0 0 0 0 2 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGACTATGTG.................................................................................................. 24 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TGTGATTAACAACCGAATATGTG.................................................................................................. 23 1 11 0.18 2 0 0 2 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAGCGACCGAATATGT................................................................................................... 23 1 11 0.18 2 0 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................ACATCAATCGCTGATA................................................................................. 16 0 17 0.18 3 1 0 0 1 0 1 0 0 0 0 0 0 0
......................................................................................................TCGTTTTCACTTAAAAATTTACA............................................... 23 0 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................ACATCAATCGCTGAAAAAA.............................................................................. 19 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................CGGGATCGTTTTCACTTAAAAATTT.................................................. 25 0 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................CGGGATCGTTTTCACTTGAAAAT.................................................... 23 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CCGGGATCGTTTTCACTTAAAAAT.................................................... 24 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAGTATA.................................................................................................... 22 2 12 0.17 2 0 0 0 0 0 0 2 0 0 0 0 0 0
........................................................TTAACGACCGAATATGT................................................................................................... 17 0 19 0.16 3 0 0 0 0 0 3 0 0 0 0 0 0 0
..................................................GTGTGATTAACAACCGAATATGTGCAAA.............................................................................................. 28 2 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................TGTGATTAACAACCGAATATGTGCTA............................................................................................... 26 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATGTGCAA............................................................................................... 27 1 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................ATTAACGACCGAATATGT................................................................................................... 18 0 18 0.11 2 0 0 0 0 0 2 0 0 0 0 0 0 0
..............................................AGTTGTGTGATTAACGACCGAATATGT................................................................................................... 27 0 9 0.11 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................ATTTGTGTGATTAACGACC........................................................................................................... 19 1 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................TGTGTGATTAACGACCGAATAT..................................................................................................... 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................TGTGTGATTAACGACCGAATA...................................................................................................... 21 0 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................TGTGTGATTAACGACCGAATATGA................................................................................................... 24 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................TGTGTGATTAACGACCTAATATGTG.................................................................................................. 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................TGCGTGATTAACGACCGAATATGTGC................................................................................................. 26 1 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAGTATGT................................................................................................... 23 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACAACCGAATATG.................................................................................................... 22 1 11 0.09 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................TGTGATTAACGACCGAA........................................................................................................ 17 0 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATGTGC................................................................................................... 23 2 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAAT....................................................................................................... 19 0 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................GTGTGATTAGCGACCGAATATGTG.................................................................................................. 24 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACAACCGAATAGGTG.................................................................................................. 24 2 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACAACCGAATATGTA.................................................................................................. 24 2 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACTGAATATGTG.................................................................................................. 24 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATGCT.................................................................................................. 24 2 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................GTGCGATTAACGACCGAATATGTG.................................................................................................. 24 1 11 0.09 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................TTGTGATTAACGACCGAATATGTG.................................................................................................. 24 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATGCG.................................................................................................. 24 1 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTACCGACCGAATATGTG.................................................................................................. 24 1 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATGAG.................................................................................................. 24 1 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAATATGTGG................................................................................................. 25 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGGCCGAATATGT................................................................................................... 23 1 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGA......................................................................................................... 17 0 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................GTGGGATTAACGACCGAATATGTG.................................................................................................. 24 1 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................TGTGATTAACGACCGAATATGT................................................................................................... 22 0 11 0.09 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................TTGTGATTAACGACCGAATATGT................................................................................................... 23 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAA........................................................................................................ 18 0 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGAGTAT..................................................................................................... 21 1 11 0.09 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................GTGCGATTAACGACCGAATATGT................................................................................................... 23 1 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCG.......................................................................................................... 16 0 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................GTGTGTTTAACGACCGAATATGTG.................................................................................................. 24 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................CAGTAAGTTGAGTCATTAAC............................................................................................................... 20 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................GTATGATTAACGACCGAATATGTG.................................................................................................. 24 1 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGTGATTAACGACCGTATAT..................................................................................................... 21 1 13 0.08 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................ACATCAATCGCTGATAAGTCACCGGGA...................................................................... 27 1 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................ACATCAATCGCTGATAAGTCACCGG........................................................................ 25 1 15 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................ACATCAATCGCTGATAAGTCACCGGA....................................................................... 26 2 16 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................TGTGATTGACGACCG.......................................................................................................... 15 1 16 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GGGTGATTAACGACCGAATATGT................................................................................................... 23 1 17 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GGGGGATTAACGACCGAATATGTG.................................................................................................. 24 2 17 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................GTGATTAACGACCGAATATGT................................................................................................... 21 0 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................GTGATTAACGACCGAATATGTG.................................................................................................. 22 0 17 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................GGGTGATTAACGACCGAAT....................................................................................................... 19 1 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................TGATTAACGACCGAATATGT................................................................................................... 20 0 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................TAACGACCGAATATGT................................................................................................... 16 0 19 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................ACGACCGAATATGTG.................................................................................................. 15 0 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................ACATCAATCGCTGAT.................................................................................. 15 0 19 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................AACGACCGAATATGTG.................................................................................................. 16 0 19 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................TTTTTTTAACAAATA...................... 15 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................GTTGTAACAAATACAGA.................. 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTTTTATTTATTTTTTTTTTATTTATTATTATTTATTTATTGACATTCAACACACTAATTGCTGGCTTATACACGTGTAGTTAGCGACTATTCTGTGGCCCTAGCAAAAGTGAATTTTTAAATGTACTTGTGTTTAAAAAAATTGTTTATGTCTTGAACGACGCGTCCTCCA
************************************.......((((((((..((((..(((((((.....(((....((((.....))))...)))...)).))))).)))).....))))))))...........*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 M025
embryo
 SRR902009
testis
 M053
female body
 O002
Head
 GSM343915
embryo
 M023
head
...........................................................TGCTGGCTTATACACGTGTAGTTAGC....................................................................................... 26 0 3 99.00 297 239 4 7 5 3 14 5 13 0 7 0 0 0
..............................................................................................GTGGCCCTAGCAAAAGTGAATTTT...................................................... 24 0 6 23.67 142 9 65 0 0 27 3 26 0 7 4 0 1 0
..............................................................TGGCTTATACACGTGTAGTTAGCGACT................................................................................... 27 0 4 22.50 90 4 25 0 32 10 15 3 0 0 1 0 0 0
.............................................................CTGGCTTATACACGTGTAGTTAGC....................................................................................... 24 0 4 22.00 88 3 9 28 4 7 2 10 21 0 4 0 0 0
...................................................................TATACACGTGTAGTTAGC....................................................................................... 18 0 5 21.00 105 0 0 90 0 0 0 0 0 0 0 15 0 0
..............................................................TGGCTTATACACGTGTAGTTAGC....................................................................................... 23 0 4 20.50 82 1 25 14 11 15 8 2 2 1 3 0 0 0
........................................................AATTGCTGGCTTATACACGTGTAGT........................................................................................... 25 0 4 15.25 61 0 39 0 13 2 5 1 0 1 0 0 0 0
.................................................................CTTATACACGTGTAGTTAGC....................................................................................... 20 0 4 10.50 42 0 0 42 0 0 0 0 0 0 0 0 0 0
...........................................................TGCTGGCTTATACACGTGTAGTTAG........................................................................................ 25 0 3 10.33 31 15 6 0 5 3 2 0 0 0 0 0 0 0
............................................................GCTGGCTTATACACGTGTAGTTAGC....................................................................................... 25 0 3 10.00 30 24 0 0 0 0 0 0 0 0 6 0 0 0
...........................................................TGCTGGCTTATACACGTGTAG............................................................................................ 21 0 4 9.50 38 38 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TATACACGTGTAGTTAGCGA..................................................................................... 20 0 5 6.00 30 0 0 30 0 0 0 0 0 0 0 0 0 0
...........................................................TGCTGGCTTATACACG................................................................................................. 16 0 4 6.00 24 24 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TTGCTGGCTTATACACGTGTAGTTAGC....................................................................................... 27 0 3 5.67 17 2 1 0 5 6 3 0 0 0 0 0 0 0
...........................................................TGCTGGCTTATACACGTG............................................................................................... 18 0 4 5.25 21 20 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................TGTTGGCTTATACACGTGTAGTTAGC....................................................................................... 26 1 3 5.00 15 0 6 0 2 5 2 0 0 0 0 0 0 0
.......................................................TAATTGCTGGCTTATACACGTGTAGT........................................................................................... 26 0 4 4.50 18 2 8 0 6 0 2 0 0 0 0 0 0 0
.............................................................TTGGCTTATACACGTGTAGTTAGC....................................................................................... 24 1 4 4.00 16 0 3 0 2 8 1 1 0 1 0 0 0 0
........................................................AATTGCTGGCTTATACACGTGTAGTTAGC....................................................................................... 29 0 3 3.67 11 0 5 0 2 3 1 0 0 0 0 0 0 0
...............................................................GGCTTATACACGTGTAGTTA......................................................................................... 20 0 4 3.50 14 0 0 14 0 0 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACGTGTAGTTAGCGACTA.................................................................................. 28 0 3 3.33 10 2 0 0 6 1 1 0 0 0 0 0 0 0
...........................................................TGCTGGCTTATACACGTGTAGTTA......................................................................................... 24 0 3 3.33 10 7 0 0 0 1 1 0 0 0 0 0 1 0
....................................................................ATACACGTGTAGTTAGCGA..................................................................................... 19 0 5 3.00 15 0 0 15 0 0 0 0 0 0 0 0 0 0
.....................................................................TACACGTGTAGTTAGCGA..................................................................................... 18 0 5 3.00 15 0 0 15 0 0 0 0 0 0 0 0 0 0
...............................................................................................TGGCCCTAGCAAAAGTGAATTTT...................................................... 23 0 6 3.00 18 1 4 0 0 3 0 4 3 2 1 0 0 0
.............................................................................................TGTGGCCCTAGCAAAAGTGAATTTT...................................................... 25 0 1 3.00 3 0 0 0 0 1 0 1 1 0 0 0 0 0
....................................................................ATACACGTGTAGTTAGCGACT................................................................................... 21 0 5 3.00 15 0 0 15 0 0 0 0 0 0 0 0 0 0
..............................................................................................GTGGCCCTAGCAAAAGTGAAT......................................................... 21 0 11 2.73 30 0 0 0 4 1 3 13 0 9 0 0 0 0
............................................................GCTGGCTTATACACGTGTAG............................................................................................ 20 0 4 2.50 10 9 0 0 0 0 1 0 0 0 0 0 0 0
........................................................AATTGCTGGCTTATACACGTGTAGTTA......................................................................................... 27 0 3 2.33 7 0 4 0 0 1 1 1 0 0 0 0 0 0
...........................................................TGCTGGCTTATACACGTGTAGT........................................................................................... 22 0 4 2.25 9 5 2 0 1 0 1 0 0 0 0 0 0 0
...........................................................TGCTGGCTTATACACGTGT.............................................................................................. 19 0 4 2.25 9 8 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACGTGTAGTTAGCGAC.................................................................................... 26 0 4 2.25 9 5 3 0 0 1 0 0 0 0 0 0 0 0
................................................................................................GGCCCTAGCAAAAGTGAATTTTTAAAT................................................. 27 0 6 2.17 13 0 5 0 2 3 3 0 0 0 0 0 0 0
.............................................................................................TGTGGCCCTAGCAAAAGTGAAT......................................................... 22 0 1 2.00 2 0 0 0 1 0 0 0 0 1 0 0 0 0
.......................................................TAATTGCTGGCTTATACACGTGTAGTT.......................................................................................... 27 0 4 2.00 8 0 4 0 3 1 0 0 0 0 0 0 0 0
................................TTATTTATTGACATTCAACACACTAAT................................................................................................................. 27 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0
................................TTATTTATTGACATTCAACACACTAATT................................................................................................................ 28 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0
............................................................................................................AGTGAATTTTTAAATGTACTTGTGTTT..................................... 27 0 5 1.80 9 0 2 0 0 4 3 0 0 0 0 0 0 0
.........................................................ATTGCTGGCTTATACACGTGTAGT........................................................................................... 24 0 4 1.75 7 0 2 0 4 0 0 1 0 0 0 0 0 0
...........................................................TGCTGGCTTATACACGTGTA............................................................................................. 20 0 4 1.75 7 7 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................GGCTTATACACGTGTAGTTAGCGACTA.................................................................................. 27 0 3 1.67 5 0 0 0 2 0 3 0 0 0 0 0 0 0
..................................................................TTATACACGTGTAGTTAGCGACTATT................................................................................ 26 0 3 1.67 5 2 0 0 0 0 0 3 0 0 0 0 0 0
................................................................................................GGCCCTAGCAAAAGTGAATTTT...................................................... 22 0 6 1.50 9 0 3 0 0 1 2 3 0 0 0 0 0 0
...............................................................GGCTTATACACGTGTAGTTAGCGACT................................................................................... 26 0 4 1.50 6 0 1 0 1 2 2 0 0 0 0 0 0 0
........................................................AATTGCTGGCTTATACACGTGTAGTT.......................................................................................... 26 0 4 1.50 6 0 4 0 1 1 0 0 0 0 0 0 0 0
.................................................................................................GCCCTAGCAAAAGTGAATTTT...................................................... 21 0 6 1.50 9 2 0 7 0 0 0 0 0 0 0 0 0 0
...............................................................................................TGGCCCTAGCAAAAGTGAAT......................................................... 20 0 11 1.36 15 0 0 13 0 0 1 1 0 0 0 0 0 0
.......................................................TAATTGCTGGCTTATACACGTGTAGTTAG........................................................................................ 29 0 3 1.33 4 0 2 0 2 0 0 0 0 0 0 0 0 0
..........................................................TTGTTGGCTTATACACGTGTAGTTAGC....................................................................................... 27 1 3 1.33 4 0 0 0 1 3 0 0 0 0 0 0 0 0
.........................................................ATTGCTGGCTTATACACGTGTAGTTAGC....................................................................................... 28 0 3 1.33 4 0 0 0 3 0 1 0 0 0 0 0 0 0
.........................................................ATTGCTGGCTTATACACGTGTAGTTAG........................................................................................ 27 0 3 1.33 4 0 1 0 1 1 1 0 0 0 0 0 0 0
.................................................ACACACTAATTGCTGGCTTATACACGT................................................................................................ 27 0 4 1.25 5 0 2 0 3 0 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACGTGTAGTTAGCGA..................................................................................... 25 0 4 1.25 5 1 1 0 3 0 0 0 0 0 0 0 0 0
..................................................................................................CCCTAGCAAAAGTGAATTTT...................................................... 20 0 6 1.17 7 0 0 7 0 0 0 0 0 0 0 0 0 0
..............................................................................................GTGGCTCTAGCAAAAGTGAATTGT...................................................... 24 2 12 1.08 13 0 2 0 0 2 0 0 0 9 0 0 0 0
................................TTATTTATTGACATTCAACACACTAA.................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................TATTTATTTATTGACATTCAACACACT.................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................TTGCTGGCTTATACACGTGTAGTTA......................................................................................... 25 0 3 1.00 3 2 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................AATGTACTTGTGTTTAAAAAAATTGT.......................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................TGCTTGCTTATACACGTGTAGTTAGC....................................................................................... 26 1 3 1.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
............................................................GCTGGCTTATACACGTGTA............................................................................................. 19 0 4 1.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
............................................................GCTGGCTTATACACG................................................................................................. 15 0 4 1.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTCTGTGGCCCTAGCAAAAGTGAATTTT...................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TTGTTTATGTCTTGAACGACGCGT...... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................TAATTGCTGGCTTATACACGTGTAGTTAGC....................................................................................... 30 0 3 1.00 3 0 2 0 0 0 1 0 0 0 0 0 0 0
.............................................................CTGGCTTATACACGTGTAGTTAGCGACT................................................................................... 28 0 4 1.00 4 1 0 0 3 0 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACGTGTAGTTAGCGACTATT................................................................................ 30 0 3 1.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0
............................................................................................ATGTGGCCCTAGCAAAAGTGAATT........................................................ 24 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................GACATTCAACACACTAATTGCTGGCTTA....................................................................................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................ATGTGGCCCTAGCAAAAGTGAATTTT...................................................... 26 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................TTTATTGACATTCAACACACTAATT................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................AAATGTACTTGTGTTTAAAAAAATTGT.......................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................ATGTACTTGTGTTTAAAAAAAT............................. 22 0 2 1.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0
............................................................................................TTGTGGCCCTAGCAAAAGTGAATTTTT..................................................... 27 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................AAATTGTTTATGTCTTGAACGACGCGT...... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................GTTGGCTTATACACGTGTAGTTAGC....................................................................................... 25 1 3 1.00 3 0 0 0 0 1 0 2 0 0 0 0 0 0
...............................................................................................................................TTGTGTTTAAATAAATTGTTTATGTCT.................. 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................ATGTGGCCCTAGCAGAAGTGAAT......................................................... 23 2 2 1.00 2 0 0 0 0 0 0 1 0 1 0 0 0 0
...........................................................TGCTGGCTTATACACGTGTAGTT.......................................................................................... 23 0 4 1.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
...................................TTTATTGACATTCAACGCACTAATT................................................................................................................ 25 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................GGCTTATACACGTGTAGTTAGC....................................................................................... 22 0 4 1.00 4 0 2 0 0 2 0 0 0 0 0 0 0 0
.......................................................AAATTGCTGGCTTATACACGTGTAGT........................................................................................... 26 1 4 1.00 4 0 1 0 0 0 2 0 0 1 0 0 0 0
.......................................................................................................................AAATGTACTTGTGTTTAAAAAAATT............................ 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................TTGCTGGCTTATACACATGTAGTTA......................................................................................... 25 1 13 0.92 12 0 0 0 9 1 2 0 0 0 0 0 0 0
...........................................................TGCTGGCTTATACACATGTAGTTAGC....................................................................................... 26 1 12 0.83 10 0 0 0 2 0 8 0 0 0 0 0 0 0
..............................................................................................TTGGCCCTAGCAAAAGTGAATTTT...................................................... 24 1 6 0.83 5 0 1 0 0 0 0 0 0 4 0 0 0 0
..............................................................................................GTGGCCCTAGCAAAAGTGAATTTTT..................................................... 25 0 6 0.83 5 0 0 0 1 3 0 1 0 0 0 0 0 0
...........................................................TGCTGGCTTATACACGT................................................................................................ 17 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................ACACACTAATTGCTGGCTTATACACGTGT.............................................................................................. 29 0 4 0.75 3 0 1 0 1 1 0 0 0 0 0 0 0 0
..........................................................TTGCTGGCTTATACACGTGTAGT........................................................................................... 23 0 4 0.75 3 1 0 0 0 1 0 1 0 0 0 0 0 0
............................................................GCTGGCTTATACACGTG............................................................................................... 17 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................GGCTTATACACGTGTAGTTAGCGAC.................................................................................... 25 0 4 0.75 3 2 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................TGCTGGCTTATACACATGTAGTTA......................................................................................... 24 1 13 0.69 9 0 0 0 6 0 3 0 0 0 0 0 0 0
............................................................GCTGGCTTATACACGTGTAGTTAG........................................................................................ 24 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AATTGCTGGCTTATACACGTGTAGTTAG........................................................................................ 28 0 3 0.67 2 0 0 0 1 0 1 0 0 0 0 0 0 0
............................................................GCTGGCTTATACACGTGTAGTTA......................................................................................... 23 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TTGCTGGCTTATACACGTGTAGTTAG........................................................................................ 26 0 3 0.67 2 0 0 0 1 1 0 0 0 0 0 0 0 0
..................................................................TTATACACGTGTAGTTAGCGACTAT................................................................................. 25 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................GGCTTATACACGTGTAGTTAGCGACTATT................................................................................ 29 0 3 0.67 2 0 0 0 2 0 0 0 0 0 0 0 0 0
.............................................................CTGGCTTATACACGTGTAG............................................................................................ 19 0 5 0.60 3 1 0 0 0 0 0 0 2 0 0 0 0 0
.............................................................................................................GTGAATTTTTAAATGTACTTGTGTTT..................................... 26 0 5 0.60 3 0 0 0 1 2 0 0 0 0 0 0 0 0
..........................................................TTGCTGGCTTATACACGTGTAGTT.......................................................................................... 24 0 4 0.50 2 0 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................TTAAATGTACTTGTGTTTAAAAAAAT............................. 26 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................AAGGCTTATACACGTGTAGTTAGCGACT................................................................................... 28 2 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0 0 0
..............................................................AGGCTTATACACGTGTAGTTAGCGACT................................................................................... 27 1 4 0.50 2 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................CGCTGGCTTATACACGTGTAGTTAGC....................................................................................... 26 1 4 0.50 2 1 0 0 0 0 0 0 1 0 0 0 0 0
...................................................ACACTAATTGCTGGCTTATACACGTGT.............................................................................................. 27 0 4 0.50 2 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TGTGGCCCTAGTAAAAGTGAAT......................................................... 22 1 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................ATTGTGGCCCTAGTAAAAGTGAAT......................................................... 24 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................TTGGCTTATACACGTGTAGTTAGCGACT................................................................................... 28 1 4 0.50 2 0 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................ATGGCTTATACACGTGTAGTTAGCGACT................................................................................... 28 1 4 0.50 2 0 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................TGGCCCTAGCAAAAGTGAATTTTTAAAT................................................. 28 0 6 0.50 3 0 0 0 1 0 0 0 0 2 0 0 0 0
...............................................................................................................................TTGTGTTTAAAAAAATTGTTTAT...................... 23 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................TATGTGGCCCTAGCAGAAGTGAAT......................................................... 24 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................TCAACACACTAATTGCTGGCTTATACACGT................................................................................................ 30 0 4 0.50 2 0 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................TTTGCTGGCTTATACACGTGTAGT........................................................................................... 24 1 4 0.50 2 0 1 0 0 0 1 0 0 0 0 0 0 0
....................................................CACTAATTGCTGGCTTATACACGTGT.............................................................................................. 26 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................AAATGTACTTGTGTTTAAAAAAAT............................. 24 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................TAATTGCTGGCTTATACACGTGT.............................................................................................. 23 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................ATGGCTTATACACGTGTAGTTAGC....................................................................................... 24 1 4 0.50 2 0 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................GGCTTATACACGTGTAGTTAGCGA..................................................................................... 24 0 4 0.50 2 0 0 0 1 1 0 0 0 0 0 0 0 0
.................................................................CTTATACACGTGTAGTTAGCGAC.................................................................................... 23 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................ATGTGGCCCTAGTAAAAGTGAAT......................................................... 23 2 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................AGTGAATTTTTAAATGTACTTGTGTT...................................... 26 0 5 0.40 2 0 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACGTGT.............................................................................................. 16 0 5 0.40 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................CTGGCTTATACACGTGT.............................................................................................. 17 0 5 0.40 2 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................AAGTGAATTTTTAAATGTACTTGTGTTT..................................... 28 0 5 0.40 2 0 0 0 1 1 0 0 0 0 0 0 0 0
............................................................................................................AGTGAATTTTTAAATGTACTTGTGT....................................... 25 0 5 0.40 2 0 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................CGGCTTATACACGTGTAGTTAGCGACT................................................................................... 27 1 5 0.40 2 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................TGTTGGCTTATACACGT................................................................................................ 17 1 5 0.40 2 0 0 0 0 1 1 0 0 0 0 0 0 0
............................................................GCTGGTTTATACACGTGTAGTTAGC....................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AATTGCTGGCTTATACACGTGTAGTTATC....................................................................................... 29 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................ATGGCTTATACACGTGTAGTTAGCGACTA.................................................................................. 29 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTGTAGTTAGCGACTAT................................................................................. 19 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................TAGTGTGGCCCTAGCAGAAGTGAA.......................................................... 24 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TGGTGGCTTATACACGTGTAGTTAGC....................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................AAAATTGCTGGCTTATACACGTGTAGTTAGC....................................................................................... 31 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................CAGTGGCCCTAGCAAAAGTGAATTTT...................................................... 26 1 6 0.33 2 0 0 0 0 0 0 0 2 0 0 0 0 0
...........................................................TGCTGGCTTATACACGTGTAGTTATC....................................................................................... 26 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................TGCTGGCTTATAGACGTGTAGTTAGC....................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TGATGGCTTATACACGTGTAGTTAGC....................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................GGCCCTAGCAAAAGTGAATTTTTAAATGT............................................... 29 0 6 0.33 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................ATTGTTGGCTTATACACGTGTAGTTAGC....................................................................................... 28 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................TTTGCTGGCTTATACACGTGTAGTTA......................................................................................... 26 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................AATTGCGGGCTTATACACGTGTAGTTA......................................................................................... 27 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACATGTAGTTAGCGACT................................................................................... 27 1 18 0.33 6 0 0 0 5 0 1 0 0 0 0 0 0 0
.......................................................TAATTGCTGGCTTATACACGTGTAGTTA......................................................................................... 28 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACGTGTAGTTAGCTACTA.................................................................................. 28 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................AATTGTTGGCTTATACACGTGTAGTTAGC....................................................................................... 29 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................TGCTGGCTTATGCACGTGTAGTAAGC....................................................................................... 26 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TTGCTGGCTTATACATGTGTAGTTAGC....................................................................................... 27 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................CGGCCCTAGCAAAAGTGAATTTT...................................................... 23 1 6 0.33 2 0 0 0 0 0 0 0 2 0 0 0 0 0
...........................................................................................................AAGTGAATTTTTAAATGTA.............................................. 19 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TGCAGGATTATACACGTGTAGTTAGC....................................................................................... 26 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................AATTGCTGGTTTATACACGTGTAGTTAG........................................................................................ 28 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................GGCTGGCTTATACACGTGTAGTTAGC....................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TGCTGGCCTATACACGTGTAGTTAGC....................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................GGCCCTAGCAAAAGTGAATTTTTAAA.................................................. 26 0 6 0.33 2 0 0 0 1 0 0 0 0 0 1 0 0 0
........................................................AAATGTTGGCTTATACACGTGTAGTTAGC....................................................................................... 29 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TGGCCCTAGCAGAAGTGCGTTT....................................................... 22 3 6 0.33 2 0 0 0 2 0 0 0 0 0 0 0 0 0
..............................................................................................GTGGCCCTAGCAGAAGTGCGTTT....................................................... 23 3 6 0.33 2 0 0 0 2 0 0 0 0 0 0 0 0 0
...........................................................AGTTGGCTTATACACGTGTAGTTAGC....................................................................................... 26 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................CTAATTGCTGGCTTATACACGTGTAGTTAGC....................................................................................... 31 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................TGCTGGCTTATACATGTGTAGTTAGC....................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................AATACACGTGTAGTTAGCGACTATT................................................................................ 25 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................GGCCCTAGCAAAAGTGAATTTTTAA................................................... 25 0 6 0.33 2 0 0 0 1 0 1 0 0 0 0 0 0 0
.............................................................TTGGCTTATACACGTG............................................................................................... 16 1 10 0.30 3 0 0 0 0 3 0 0 0 0 0 0 0 0
........................................................AAAAGCTGGCTTATACACGTGTAGT........................................................................................... 25 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACGCGTAGTTAGCGACT................................................................................... 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................GCTGGCTTATACACGTGTAGT........................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACGTGTAGTTATC....................................................................................... 23 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................TGCTGGTTTATACACGTGTAG............................................................................................ 21 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................GGCTTATACACGCGTAGTTAGC....................................................................................... 22 1 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................TCGTTGGCTTATACACGTGTAGTTAGC....................................................................................... 27 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................AAAATTGTTTATGTCTT................. 17 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................AATTGCTGGCTTGTACACGTGTAGT........................................................................................... 25 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................AAATGTACTTGTGTTT..................................... 16 0 8 0.25 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACGTGTACTTAGCGACT................................................................................... 27 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTGGCTGATACACGTGTAGTTAGC....................................................................................... 24 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................TACAGGCTTATACACGTGTAGTTAGC....................................................................................... 26 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AAAAAAATTGTTTATGTCTT................. 20 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................CTGGCTTATACACGTGTAGTTAG........................................................................................ 23 0 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0
...............................................CAACACACTAATTGCTGGCTTATACACGT................................................................................................ 29 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................ACACTAATTGCTGGCTTATACACG................................................................................................. 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TGTTGGCTTATACACGTGT.............................................................................................. 19 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................AATTGCTGGCTTATACACGTATAGT........................................................................................... 25 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................TTACTGGCTTATACACGTGTAGTTAGC....................................................................................... 27 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................GGCTTATACACGTGTGGTTAGCGA..................................................................................... 24 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................TGTTGGCTTATACACGTG............................................................................................... 18 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................AAAAATTGTTTATGTCTT................. 18 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................TAATTGCTGGCTTATACACGTGTAG............................................................................................ 25 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACGTGTAGTTAGCGACC................................................................................... 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................GCTTATACACGTGTAGTTAGCGAC.................................................................................... 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TGCTGGCTTATACACGAG............................................................................................... 18 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................GCTGGCTTATACACGT................................................................................................ 16 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TAATTGCTGGCTTATACACG................................................................................................. 20 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................ATTGTTGGCTTATACACGTGTAGT........................................................................................... 24 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................GGCTTATACACGTGTAGTTAGG....................................................................................... 22 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACGTGTAGTTAGCGATT................................................................................... 27 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................TGCTGGCTTATACACGTGTCG............................................................................................ 21 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TTGCTGACTTATACACGTG............................................................................................... 19 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................ACACAATAATTGCTGGCTTATACACGTGT.............................................................................................. 29 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................TAAGCTTATACACGTGTAGTTAGCGACT................................................................................... 28 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................ATTTATTTTTATTTATTTATTTACATT............................................................................................................................. 27 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................AATTGCTAGCTTATACACGTGTAGT........................................................................................... 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................AACACACTAATTGCTGGCTTATACACGT................................................................................................ 28 0 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................CAACACACTAATTGCTGGCTTATA..................................................................................................... 24 0 9 0.22 2 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................CAACACACTAATTGCTGGCTTATACA................................................................................................... 26 0 9 0.22 2 0 1 0 1 0 0 0 0 0 0 0 0 0
...............................................CAACACACTAATTGCTGGCTTATACAC.................................................................................................. 27 0 9 0.22 2 0 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................CAGCTTATACACGTGTAGTTAGC....................................................................................... 23 2 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................TGGCTTATACACGTGTAGT........................................................................................... 19 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACGTGTAGTT.......................................................................................... 20 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................TTGGCTTATACACGTGTAGT........................................................................................... 20 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACGTGTAG............................................................................................ 18 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................ACATTCAACACACTAA.................................................................................................................. 16 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACGTGTATTTAGC....................................................................................... 23 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................TTATACACGTGTAGTTAGC....................................................................................... 19 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................AAGTGAATTTTTAAATGTACTTGTGTT...................................... 27 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACGTGTA............................................................................................. 17 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................AGCAAAAGTGAATTTTTAAATGTACT............................................ 26 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................TGTGAATTTTTAAATGTACTTGTGTTT..................................... 27 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................CTGGCTTATACACGTGTAGT........................................................................................... 20 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................AGTGAATTTTTAAATGTACTTGTTTTT..................................... 27 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................TGCTGGCTTATACACGTGTAGTTCGC....................................................................................... 26 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACTTGTAGTTAGC....................................................................................... 23 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TGAATTTTTAAATGTACTTGTGTTT..................................... 25 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACGTG............................................................................................... 15 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGAATTTTTAAATGTACTTGTGT....................................... 24 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................TAGTGAATTTTTAAATGTACTTGTGTTT..................................... 28 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................CTGGCTTATACACGTG............................................................................................... 16 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................TTGCTGGCTTATACACGTGTAGTTCGC....................................................................................... 27 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................CTGGCTTATACACGTGTAGTT.......................................................................................... 21 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 1
................................................................GCTTATACACGTGTAG............................................................................................ 16 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TGCTTGCTTATACACATGTAGTTAGC....................................................................................... 26 2 12 0.17 2 0 0 0 2 0 0 0 0 0 0 0 0 0
..............................................................................................GTGGCCCTAGCAAAAGTGAATTTTTAAATGT............................................... 31 0 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................ATGGCCCTAGCAAAAGTGAATTTTTAAA.................................................. 28 1 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................AGCAAAAGTGAATTTT...................................................... 16 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GTGGCCCTAGCTAAAGTGAATTTT...................................................... 24 1 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................AGTGGCCCTAGCAAAAGTGAATTTTTAA................................................... 28 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................TGGCCCTAGCAAAAGTGAATTT....................................................... 22 0 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................................GGCCCTAGCAAAAGTGAATTTTT..................................................... 23 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GTGGCCCTAGCAAAAGTTAATTTT...................................................... 24 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GTGGCCCTAGCAAAAGTGAATTTTTAA................................................... 27 0 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................GGCCCTAGCAAAAGTGAATTTTA..................................................... 23 1 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................GAGGCCCTAGCAAAAGTGAATTTTT..................................................... 25 1 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................TTCTGCTGGCTTATACACGTGTAGT........................................................................................... 25 3 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................TGCTGGCTTATACACATGTAGTTAG........................................................................................ 25 1 12 0.17 2 0 0 0 1 1 0 0 0 0 0 0 0 0
................................................................................................GGCCCTAGCAGAAGTGCGTTTT...................................................... 22 3 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................TAGTGGCCCTAGCAAAAGTGAATTTT...................................................... 26 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................TTGCTGGCTTATACACATGTAGTTAGC....................................................................................... 27 1 12 0.17 2 0 0 0 0 0 2 0 0 0 0 0 0 0
...........................................................................................................AAGTGAATTGTTAAATGTGCTTGTGTTT..................................... 28 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................AAAGTGGCCCTAGCAAAAGTGAATTTT...................................................... 27 3 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................TGGCCCTAGCAAAAGTGAATTTTT..................................................... 24 0 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................GTGGCCCTAGCAGAAGTGCGTTTT...................................................... 24 3 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................TGGCCCTAGCAAAAGTGAATTTTTAAATGT............................................... 30 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................AATTGCTGGCTTATACACATGTAGTTA......................................................................................... 27 1 13 0.15 2 0 0 0 2 0 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACATGTAGTTAGC....................................................................................... 23 1 20 0.15 3 0 0 0 3 0 0 0 0 0 0 0 0 0
...................................................ACACTAATTGCTGGCTTATACACTTGTA............................................................................................. 28 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..TTTATGTACTTTTTCTTTATTTAT.................................................................................................................................................. 24 3 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................AAAGTGAATTTTTAAAT................................................. 17 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................AAAAAATTGTTTATGTCGTGCT.............. 22 3 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................AAATGTACTTGTGTTTA.................................... 17 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TTAAATGTACTTGTGTTTAA................................... 20 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTTTAAAAAAATTGTATACGTCT.................. 24 3 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................TGGCTTATACACATGTAGTTAGCGACTA.................................................................................. 28 1 15 0.13 2 0 0 0 0 0 2 0 0 0 0 0 0 0
...............................................................................................TGGCCCTAGCAGAAGTGCGTT........................................................ 21 3 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................TTGGCTTATACACGTGT.............................................................................................. 17 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TACACGTGTAATTAGC....................................................................................... 16 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TAAATGTACTTGTGTT...................................... 16 0 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................TGTTGGCTTATACACG................................................................................................. 16 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......TTATTTTGTTTTTAGTTACTATTA............................................................................................................................................. 24 3 9 0.11 1 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................TCAACACACTAATTGCTGGCTTATACAC.................................................................................................. 28 0 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................TCAACACACTAATTGCTGGCTTATACA................................................................................................... 27 0 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................CAACACACTAATTGCTGGCTTAT...................................................................................................... 23 0 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................ACAACACACTAATTGCTGGCTTAT...................................................................................................... 24 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................CAACACACTAATTGCTGGCTTA....................................................................................................... 22 0 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................ACACACTAATTGCTGGCTT........................................................................................................ 19 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTTTAAATGTACTTGCGTTTAAAT................................. 24 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................ACACACTAATTGCTGGCTTA....................................................................................................... 20 0 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................TCAACACACTAATTGCTGGC.......................................................................................................... 20 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................GCCCTAGCAAAAGTGAAT......................................................... 18 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GTGGCCCTAGCAAAAGTGAATTGT...................................................... 24 1 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTGGCCCTAGCAAAAGTGAAT......................................................... 21 1 11 0.09 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................CACACTAATTGCTGGCTTAT...................................................................................................... 20 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................ACACTAATTGCTGGCTTA....................................................................................................... 18 0 11 0.09 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................TGGCCCTAGCAAAAGTGA........................................................... 18 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GTGGCCCTAGCAAAAGTGGAT......................................................... 21 1 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................GGCCCTAGCAAAAGTGAAT......................................................... 19 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................CTAGCAAAAGTGAATTGT...................................................... 18 1 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................TGCTGGCTTACACACATGTAGTTAGC....................................................................................... 26 2 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................TGGCTCTAGCAAAAGTGAATTGT...................................................... 23 2 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................TAATTGCTGGCTTATACACATGTAGTTAGC....................................................................................... 30 1 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................GGCCCTAGCAGAAGTGCGTTT....................................................... 21 3 13 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................TGGCTTATACACATGTAGTTAGCGACTAT................................................................................. 29 1 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................ATTGCTGGCTTATACACATGTAGTTA......................................................................................... 26 1 13 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................TAATTGCTGGCTTATACACATGTAGTTA......................................................................................... 28 1 13 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................CTTATACACATGTAGTTAGCGACTATT................................................................................ 27 1 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CACTAATTGCTGGCTTATAC.................................................................................................... 20 0 17 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................AAAAAATTTTTAAATGTACTTGT......................................... 23 3 18 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................CTGGCTTATACACATGTAGTTAGCGACT................................................................................... 28 1 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 node_105604:2070-2241 - dsi_343 AAAAATAAA-TAAAAAAAAAATAAAT--------A-A--------TA----------------------------------------------ATA------AATAAATA--A---------CTGTAAGTTGTGTGATTAACGACCGAATATGTGCACATCAATC-GCTGATAAGACACCGGGATCGTTTTCACTTAAAAA---TTTACATGAACACA---------------AATTTTTTTAACAAATACAGAACTTGCTGCGCA-----------------------------GGAGGT----
droSec2 scaffold_1627:118-294 - AAAAAAAAA-GACAAAAAGAAGAAAA--------A-A--------AA----------------------------------------------AAAGAAAAA-ATAAAAAAAA-------AAAAAAA---------------------------------------AA--AAATTGCACAGTGATACAGTTTCCTTCGGCAAA-G--------TCATGT----ATGTG-TTTGTGTTGCGCC-GCCTGTATAACCCTAGCGACGTCGACGCACCACTGTACATTGGCTGCCGCCAAAAGCTGATG
dm3 chr3RHet:2086423-2086597 - AAAAAAAAA-AACAAAAAAAAGAAAA--------A-A--------AA---AAAGGAAGAAT--------------------------------------------------AAA-------AA------------------------------------------A-A--AATTTGCACAGTGATACAGTTTCCTTCGGCAAA-ATCAAGTAAGCATGT----ATGTG-TTTGTGTTGCGCC-GCTTGTATAACCCTAGCGACGTCGACGCATCACTGTACATTGGCTGCCGCCAAAAGCTGATG
droEre2 scaffold_879:115-296 - ACAAATAAA-TACATGAAAAAAAAAA--------A-G---------------------------------AAAAAAAAATATTAA------------------ATAAAAATAA-----------------------------------------------------AA--TTTGTACAAAGTGATACGGTTTCCTTCGGCAAA-ATCAAGTAAGCATGT----ATGTG-CTTGTGTTGCGCC-GCTTGTAAAACCCTTGCGACGTCGAGGCATCAATGTACATTGGCTGCCGCCAAGAGCTGATG
droYak3 v2_chrUn_008:68686-68863 + ACAATTATT-ATTCATAACAATAAAA--------A-A--------AT----------------------------------------------AAAATAATAAATAAAAATTA--------A---------------------------------------------A--TATATACACAGTGATACAGTTTCCTTCGGCAA--ATCAAGTAAGCATGT----ATGTG-TTTGTGTTGCGTC-GCTTGTAAAATTCTTGCGACGTCGGCGCATCACTGCACATTGGCTGCCGCCAAGAGCTGATG
droEug1 scf7180000409497:2485-2655 + AAAATTAAT-GAATAAATAAA-----------------------------------------------GAATGCACAAATATTATACAAAAG-------------A----TAA-------AAAATAC---------------------------------------AA--ATTATACACAGTGATACCATTCCCTCTGGGG-------AGTAAACATCT----TTGTG-TTTGTGCTACGCC-GATTGTAAGATTCTCGCCGCGTC--------GATGTGCATTGGGTGTCGCCAAAAGCTGATG
droBia1 scf7180000302414:134761-134925 - AAAACAAGAATAC-----T-ATAAGA-AATTAAT-----------------------AAATAAATTAAACCTGCACA-------------------------------------------------------------------------------------------------TACACGGTTATACTGTTCCCTTTGCCAACAATCAAGAAAACATGT----ATGTG-TTTGTGTTACGCCAGCTTGTGAGTTTCTTGCTGCGTC--------GCTGTACATTGGCTGCCGAAGAGAGCTAATG
droTak1 scf7180000414155:22823-23002 - AAAAAAAAT-TTA---------------------------------------------------TTTAATCTGCACAAATATAATACAAAACTAAAAAAAAA---A---T-AA-A------AG--------------------------------------------G--TACATACACAGTGAGACAGTTGCCTCCGGCTAATATAAAGTGAACATTC----ATGTG-TTTGTGTTATGCATACTTTTGAAATTATTGCTATGTC--------ACTGTGCATTGGTTGCCGGCGAGAGCTGATG
droEle1 scf7180000488929:70-120 - AACAAGACA-AAA----TGAATACAA--------A-A--------AT----------------------------------------------AAAATGTAA-ACAAAAATAAA-------AT------------------------------------------A-A--AT-------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000763649:5767-5945 + AAAACGAAT------------------------------------------------GAATAAATTAAACCTGCACAAATATTATACAAAAC-------------A----TAC-------AAAATTA---------------------------------------AA--GTCATACACAGTGATACTGTTCGCTTCGGCACATTTCAAGTAAACATGT----ATTTATTTTGTGTTACGCC-ATTTGTGAAATTCCTGCTAAGTC--------ACTGTGTATTGGCTGCCGCCGAGAGCTGATG
droFic1 scf7180000454064:3859-3998 - AATAAAAAC-AGCAATACT-ATAAAAAAAGGAAT-----------------------TACTAAATTAAACCTGCTGAAA--------------------------------------------------------------------------------------------------AA--------------------AAAAAATCAAGTAAACGTCT----ATGTG-CTTATGTTACACCTGCTTGTGAAACTTTTCCTGAGGC--------G--GCAGAGTGGCTGAACAA-------CACG
droKik1 scf7180000299531:11615-11762 - ATACTAAAA-AACGAACGAAT------------------------------------GAATAAATTAAAGCTGCACAAATATTACAAAAAAC-------------A----TAA-------AA---------------------------------------------A--ATCACACACAGTGATACTTTTCTCTTCAGAAAAT-----GTAACAATGT----ATGTG-TTTGTATTGCTTTCGCTTGTGAAATTCTTGCTGTGTC---------------------------------------
droAna3 scaffold_4445:3321-3506 - AAACAAGAA-TACAAAACAAAAAAAA--------ACAAAAAAAACACAAAAATGGAAGAATAAATTAAACCTGCACAAATA----------------------------------------------------------------------------------------------------TCATACTGTTCCCTTTGGCAAAAATCAAGCAAACATGTAAGCATGTA-TTTGTGTTACGCC-GCTTGTGAAACTCTTGTTGCGTC--------GCTGTGCAGTGACTGCCGAAAAGAGCTGATG
droBip1 scf7180000392193:1791-1965 + GAATACTAA-AACAAAAGAAAAAAAA--------A-AACAAAAA------AATGGTAGAATAAAATAAACCTGCACAAATA----------------------------------------------------------------------------------------------------TTATACTGTTCCCTTCGGCAAATATCAGGCAAACATGT----ATGTA-TTTGTGTTACGCC-GCTTGTGAAACTCTTGTTGCATC--------GTTGTGCAGTGGCTGCCGCCATGAGCTGATT
droWil2 scf2_1100000007699:387-483 - TAAAACACT-CAAAAAAAAAAAAAAA--------A-A--------AT----------------------------------------------ATAGAAAAAAATAAAAA-AA-------AAA--------------------------------------------T--AATAAGGATAATAATACAGAT-----------GT-----ATATTAGTGT----ACGTG-TGTGCAT---------------------------------------------------------------------
droMoj3 scaffold_1677:928-981 + AAAAAGAAA-AAAAAAAAGAATAAAA--------A-A--------CA----------------------------------------------AAAAGGAAA---A---A-AA-AGGGGGAAA--------------------------------------------A--AA-------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:9897474-9897528 - AGTTTGACA-AAAAAGGAAAAGAAAA--------AAATTAAAAA------AATAAAAATAT--------------------------------------------------AAA-------AA------------------------------------------A-G--GA-------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAAAATAAA-TAAAAAAAAAATAAAT--------A-A--------TA----------------------------------------------ATA------AATAAATA--A---------CTGTAAGTTGTGTGATTAACGACCGAATATGTGCACATCAATC-GCTGATAAGACACCGGGATCGTTTTCACTTAAAAA---TTTACATGAACACA---------------AATTTTTTTAACAAATACAGAACTTGCTGCGCA-----------------------------GGAGGT----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................GTGTGATTAACGACCGAATATGTGC.....................................................................................................................................................254124.0049600041609834118143110000
...................................................................................................................................GTGTGATTAACGACCGAATATGTG......................................................................................................................................................241175.64832000300307360984530151000
...................................................................................................................................GTGTGATTAACGACCGAATATGT.......................................................................................................................................................231121.0923200040037431481040193000
...................................................................................................................................GTGTGATTAACGACCGAATATGTGCA....................................................................................................................................................26417.50700000009373000165000
..................................................................................................................................TGTGTGATTAACGACCGAATATGTG......................................................................................................................................................25109.6096000100112534214000000
..................................................................................................................................TGTGTGATTAACGACCGAATATGTGC.....................................................................................................................................................2647.0028000300123100000000
....................................................................................................................................TGTGATTAACGACCGAATATGTGC.....................................................................................................................................................2444.2517000000114110000000
...........................................................................................................................................................................................................................................TTTTTTTAACAAATACAGAACTTGC.............................................2514.00400000011020000000
..............................................................................................................................................................................................................................................TTTTAACAAATACAGAACTTGCTGCGC........................................2713.00300000002010000000
...........................................................................................................................................................................................TTTTCACTTAAAAA---TTTACATGAACA.........................................................................................2652.601300000006040030000
......................................................................................................................................TGATTAACGACCGAATATGTGC.....................................................................................................................................................2242.501000000008020000000
...............................................................................................................................................................................................................................................TTTAACAAATACAGAACTTGCTGCGC........................................2612.00200000002000000000
...................................................................................................................................GTGTGATTAACGACCGAATATGTGCAC...................................................................................................................................................2742.00800000001001060000
............................................................................................................................................................ACATCAATC-GCTGATAAGACACCGG...........................................................................................................................2512.00200000000002000000
........................................................................................................TAAATA--A---------CTGTAAGTTGTGTGATTAACGA.................................................................................................................................................................2912.00200000002000000000
...........................................................................................................................................................................................TTTTCACTTAAAAA---TTTACATGAAC..........................................................................................2551.60800000004110020000
...................................................................................................................................GTGTGATTAACGACCGAATATG........................................................................................................................................................22111.091200010022111040000
...........................................................................................................................................................................................................................................TTTTTTTAACAAATACAGAACTTGCT............................................2611.00100000001000000000
.................................................................................................................................................................................................................................................TAACAAATACAGAACTTGCTGCGCA-----------------------------GGAAA.....3011.00100000000000001000
...................................................................................................................................GTGTGATTAACGACCGAATATGTGCAT...................................................................................................................................................2741.00400000000000040000
..............................................................................................TA------AATAAATA--A---------CTGTAAGTTGTGTGA........................................................................................................................................................................2611.00100000001000000000
.................................................................................................................................................................................................................................................TAACAAATACAGAACTTGCTGCGCA-----------------------------..........2511.00100000001000000000
...............................................................................................................................................................TCAATC-GCTGATAAGACACCGG...........................................................................................................................2211.00100000000010000000
..............................................................................................................................................................................................................................................TTTTAACAAATACAGAACTTGCTGCGCA-----------------------------..........2811.00100000000010000000
.........................................................................................................................................................................................................................................AATTTTTTTAACAAATACAGAACT................................................2411.00100000001000000000
............................................................................................................TA--A---------CTGTAAGTTGTGTGATTAACGACC...............................................................................................................................................................2711.00100000001000000000
.................................................................................................................................................................................................................................................TAACAAATACAGAACTTGCTGCGCA-----------------------------GG........2711.00100000001000000000
............................................................................................................................................................ACATCAATC-GCTGATAAGACACC.............................................................................................................................2311.00100001000000000000
...........................................................................................................ATA--A---------CTGTAAGTTGTGTGATTAACGACCGA.............................................................................................................................................................3011.00100000001000000000
................................................................................................................................................................................................................................................TTAACAAATACAGAACTTGCTGCGCA-----------------------------G.........2711.00100000000010000000
.................................................................................................................................................................................................................................................TAACAAATACAGAACTTGCTGCGCA-----------------------------GGA.......2811.00100000000000010000
............................................................................................................................................................................................................................................TTTTTTAACAAATACAGAACTTGC.............................................2411.00100000001000000000
............................................................................................................................................................................................................................................TTTTTTAACAAATACAGAACTTGCTGCGC........................................2911.00100000000010000000
......................................................................................................................................................................................................................CACA---------------AATTTTTTTAACAAATACAGAACT................................................2811.00100000001000000000
.............................................................................................................................................................................................................................................TTTTTAACAAATACAGAACTTGCTGCGC........................................2811.00100000001000000000
....................................................................................................................................TGTGATTAACGACCGAATATGTG......................................................................................................................................................23110.911000000017020000000
...................................................................................................................................................................................CGGGATCGTTTTCACTTAAAAA---TT...................................................................................................2460.83500000001400000000
........................................................................................................................................................................................TCGTTTTCACTTAAAAA---TTTACATGAA...........................................................................................2750.80400030000010000000
.............................................................................................................................................................................................TTCACTTAAAAA---TTTACATGAACACA---------------........................................................................2650.80400010000100020000
.............................................................................................................................................................................................TTCACTTAAAAA---TTTACATGAACACA---------------AA......................................................................2850.80400000021010000000
...........................................................................................................................................................................................TTTTCACTTAAAAA---TTTACATGAACAC........................................................................................2750.80400000001000030000
.................................................................................................................................TTGTGTGATTAACGACCGAATATGTGC.....................................................................................................................................................2740.75300000002100000000
..................................................................................................................................TGTGTGATTAACGACCGAATATGTGCA....................................................................................................................................................2740.75300000010010001000
...................................................................................................................................GTGTGATTAACGACCGAATATGTGCT....................................................................................................................................................2640.75300000003000000000
................................................................................................................................................CCGAATATGTGCACATCAATC-GCTGA......................................................................................................................................2640.75300000020001000000
.................................................................................................................................TTGTGTGATTAACGACCGAATATGTG......................................................................................................................................................2690.67600000022110000000
..............................................................................................................................................................................................TCACTTAAAAA---TTTACATGAACACA---------------........................................................................2550.60300000010001010000
...............................................................................................................................................................................................CACTTAAAAA---TTTACATGAACACA---------------AA......................................................................2650.60300000021000000000
...................................................................................................................................GTGTGATTAACGACCGAATAT.........................................................................................................................................................21110.55600000000000042000
......................................................................................................................................TGATTAACGACCGAATATGTGCACA..................................................................................................................................................2540.50200000000000020000
.................................................................................................................................................CGAATATGTGCACATCAATC-GCTGA......................................................................................................................................2540.50200000010010000000
..................................................................................................................................................GAATATGTGCACATCAATC-GCTG.......................................................................................................................................2340.50220000000000000000
......................................................................................................................................TGATTAACGACCGAATATGTG......................................................................................................................................................21180.44800000016100000000
.............................................................................................................................................................................................TTCACTTAAAAA---TTTACATGAACACA---------------AATT....................................................................3050.40200000001100000000
.....................................................................................................................................................TATGTGCACATCAATC-GCTGA......................................................................................................................................2150.40210000010000000000
........................................................................................................................................................................................TCGTTTTCACTTAAAAA---TTTACATGAACA.........................................................................................2950.40200000000110000000
............................................................................................................................................................................................TTTCACTTAAAAA---TTTACATGAAC..........................................................................................2450.40200010001000000000
........................................................................................................................................................................................TCGTTTTCACTTAAAAA---TTTACATGAAC..........................................................................................2850.40200010000010000000
..............................................................................................................................................................................................TCACTTAAAAA---TTTACATGAACACA---------------AA......................................................................2750.40200000010100000000
..............................................................................................................................................................................................TCACTTAAAAA---TTTACATGAAC..........................................................................................2250.40200000000200000000
...................................................................................................................................................................................................TAAAAA---TTTACATGAACACA---------------AATTTT..................................................................2650.40200000020000000000
...................................................................................................................................GTGTGATTAACGACCGAATATGTT......................................................................................................................................................24110.36400000000011020000
.................................................................................................................................................................................ACCGGGATCGTTTTCACTTAAAAA---TT...................................................................................................2660.33200000000200000000
...................................................................................................................................GTGTGATTAACGACC...............................................................................................................................................................15120.33400000000004000000
..................................................................................................................................TGTGTGATTAACGACCGAATATGT.......................................................................................................................................................24100.30300000002001000000
.......................................................................................................................................GATTAACGACCGAATATGT.......................................................................................................................................................19180.28500000000005000000
...................................................................................................................................GTGTGATTAACGACCGAATA..........................................................................................................................................................20110.27300000010200000000
...........................................................................................................................................AACGACCGAATATGTGC.....................................................................................................................................................1740.25100000000001000000
.........................................................................................................................................TTAACGACCGAATATGTGCT....................................................................................................................................................2040.25100000000001000000
...................................................................................................................................GTGTGATTAACGACCGAATATGTGCCT...................................................................................................................................................2740.25100000001000000000
...................................................................................................................................GTGTGATTAACGACCGAATATGTGCACA..................................................................................................................................................2840.25100000001000000000
..............................................................................................................................................GACCGAATATGTGCACATCAATC-G..........................................................................................................................................2440.25100000000001000000
................................................................................................................................................CCGAATATGTGCACATCAATC-GCG........................................................................................................................................2440.25110000000000000000
................................................................................................................................................CCGAATATGTGCACATCAATC-GCT........................................................................................................................................2440.25100010000000000000
...............................................................................................................................................ACCGAATATGTGCACATCAATC-GCTG.......................................................................................................................................2640.25110000000000000000
.................................................................................................................................TTGTGTGATTAACGACCGAATATGT.......................................................................................................................................................2590.22200000000011000000
.............................................................................................................................................................................................TTCACTTAAAAA---TTTACATGAACACA---------------A.......................................................................2750.20100000000000010000
...............................................................................................................................................................................................CACTTAAAAA---TTTACATGAACACA---------------AATT....................................................................2850.20100000001000000000
.............................................................................................................................................................................................TTCACTTAAAAA---TTTACATGAACAC........................................................................................2550.20100000000000010000
........................................................................................................................................................................................TCGTTTTCACTTAAAAA---TTTACATGA............................................................................................2650.20100000000100000000
...............................................................................................................................................................................................CACTTAAAAA---TTTACATGAACACA---------------AATTT...................................................................2950.20100000010000000000
...............................................................................................................................................................................................CACTTAAAAA---TTTACATGAACACA---------------AAT.....................................................................2750.20100000000100000000
.............................................................................................................................................................................................TTCACTTAAAAA---TTTACATGAACACA---------------AAT.....................................................................2950.20100000000100000000
............................................................................................................................................................................................TTTCACTTAAAAA---TTTACATGAACACA---------------........................................................................2750.20100000010000000000
..............................................................................................................................................................................................TCACTTAAAAA---TTTACATGAACACA---------------AAT.....................................................................2850.20100000010000000000
.............................................................................................................................TAAGTTGTGTGATTAACG..................................................................................................................................................................1850.20100000000001000000
...................................................................................................................................................................................................TAAAAA---TTTACATGAACACA---------------A.......................................................................2150.20100000000000010000
..........................................................................................................................................................GCACATCAATC-GCTGA......................................................................................................................................1650.20100000010000000000
.....................................................................................................................................................TATGTGCACATCAATC-GC.........................................................................................................................................1850.20100000000001000000
..................................................................................................................................TGTGTGATTAACGACCGAATATG........................................................................................................................................................23100.20200000000101000000
..............................................................................................................................................................................................TCACTTAAAAA---TTTACATGAACACA---------------A.......................................................................2650.20100000010000000000
.............................................................................................................................................................................................TTCACTTAAAAA---TTTACATGAACA.........................................................................................2450.20100000000000010000
..............................................................................................................................................GACCGAATATGTGCACA..................................................................................................................................................1750.20100000000001000000
..............................................................................................................................................................................................TCACTTAAAAA---TTTACATGAACACA---------------AATT....................................................................2950.20100000010000000000
...........................................................................................................................................................................................TTTTCACTTAAAAA---TTTACATGAA...........................................................................................2450.20100010000000000000
............................................................................................................................................................ACATCAATC-GCTGATAAG..................................................................................................................................18160.19300000001002000000
............................................................................................................................................................ACATCAATC-GCTGATA....................................................................................................................................16170.18300000001011000000
........................................................................................................................................................................................TCGTTTTCACTTAAAAA---TTTACA...............................................................................................2360.17100010000000000000
...................................................................................................................................................................................CGGGATCGTTTTCACTTAAAAA---TTT..................................................................................................2560.17100000000100000000
..................................................................................................................................................................................CCGGGATCGTTTTCACTTAAAAA---T....................................................................................................2460.17100000001000000000
.........................................................................................................................................TTAACGACCGAATATGT.......................................................................................................................................................17190.16300000000003000000
...................................................................................................................................GTGTGATTAACGACCGAATATGTGCAA...................................................................................................................................................2770.14100000000000010000
........................................................................................................................................ATTAACGACCGAATATGT.......................................................................................................................................................18180.11200000000002000000
...............................................................................................................................AGTTGTGTGATTAACGACCGAATATGT.......................................................................................................................................................2790.11100000000001000000
..................................................................................................................................TGTGTGATTAACGACCGAATAT.........................................................................................................................................................22100.10100000001000000000
..................................................................................................................................TGTGTGATTAACGACCGAATA..........................................................................................................................................................21100.10100000000001000000
..................................................................................................................................TGTGTGATTAACGACCGAATATGA.......................................................................................................................................................24100.10100000001000000000
....................................................................................................................................TGTGATTAACGACCGAA............................................................................................................................................................17110.09100000000001000000
...................................................................................................................................GTGTGATTAACGACCGAAT...........................................................................................................................................................19110.09100000000001000000
...................................................................................................................................GTGTGATTAACGACCGAATATGCT......................................................................................................................................................24110.09100000000001000000
...................................................................................................................................GTGTGATTAACGACCGAATATGTGG.....................................................................................................................................................25110.09100000001000000000
...................................................................................................................................GTGTGATTAACGACCGA.............................................................................................................................................................17110.09100000000001000000
....................................................................................................................................TGTGATTAACGACCGAATATGT.......................................................................................................................................................22110.09100010000000000000
...................................................................................................................................GTGTGATTAACGACCGAA............................................................................................................................................................18110.09100000000001000000
...................................................................................................................................GTGTGATTAACGACCG..............................................................................................................................................................16120.08100000000001000000
.....................................................................................................................................GTGATTAACGACCGAATATGT.......................................................................................................................................................21170.06100000000001000000
.....................................................................................................................................GTGATTAACGACCGAATATGTG......................................................................................................................................................22170.06100010000000000000
......................................................................................................................................TGATTAACGACCGAATATGT.......................................................................................................................................................20180.06100000000001000000
..........................................................................................................................................TAACGACCGAATATGT.......................................................................................................................................................16190.05100000000001000000
............................................................................................................................................ACGACCGAATATGTG......................................................................................................................................................15190.05100000001000000000
............................................................................................................................................................ACATCAATC-GCTGAT.....................................................................................................................................15190.05100000000001000000
...........................................................................................................................................AACGACCGAATATGTG......................................................................................................................................................16190.05100000000001000000
...........................................................................................................................................................................................................................................TTTTTTTAACAAATA.......................................................15200.05100000000100000000
droSec2
AAAAAAAAA-GACAAAAAGAAGAAAA--------A-A--------AA----------------------------------------------AAAGAAAAA-ATAAAAAAAA-------AAAAAAA---------------------------------------AA--AAATTGCACAGTGATACAGTTTCCTTCGGCAAA-G--------TCATGT----ATGTG-TTTGTGTTGCGCC-GCCTGTATAACCCTAGCGACGTCGACGCACCACTGTACATTGGCTGCCGCCAAAAGCTGATGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................AA----------------------------------------------AAAGAAAAA-ATAAAAAAA.................................................................................................................................................................................................2050.2010001
......................................................................................................................................................................................................................................................................................TACATTGGCTGCCGCCAAAAGCTGA..25130.0811000
..................................................................................................................................................................................................................................................................................ACTGTACATTGGCTGCCGCC...........20200.0510001
dm3
AAAAAAAAA-AACAAAAAAAAGAAAA--------A-A--------AA---AAAGGAAGAAT--------------------------------------------------AAA-------AA------------------------------------------A-A--AATTTGCACAGTGATACAGTTTCCTTCGGCAAA-ATCAAGTAAGCATGT----ATGTG-TTTGTGTTGCGCC-GCTTGTATAACCCTAGCGACGTCGACGCATCACTGTACATTGGCTGCCGCCAAAAGCTGATGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................TAAGCATGT----ATGTG-TTTGTGTTGC..................................................................241235.0042000000000000000000000001500000000000010203240130302030292000000000000000000000000000020300000000000000300000002000000000000000000000000000000000130001694923000000000000000000000000000000000000000040040060000001000000000401010701110000000000100000000000000000000000000000000000000000000000000001073079150000004136000000000000004282225000000
..............................................................................................................................................................................................................CAAGTAAGCATGT----ATGTG-TTTG........................................................................22206.75135000000000000000000000040000000000000205017000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000340008000000000000000000001000000000000000000000000000000000000000400100000000000000000000000000000400000000000000000000000000000000000000000000019000000001002000000000000002020000000
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................................................................................................................................................................................CACAGTGATACAGTTTCCTTCGGCA........................................................................................................25130.2330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TTGCGCC-GCTTGTATAACCC.................................................20130.2330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................GCGACGTCGACGCATCACTGTACATTGGC..................29130.2330000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................................................................................................................................CGCATCACTGTACATTGGCTGCCGC............25130.2330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................CGCATCACTGTACATTGGCTGCCGCCAA.........28130.2330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................A---AAAGGAAGAAT--------------------------------------------------AAA-------AA------------------------------------------A-A--AATTT..................................................................................................................................2490.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................CAGTGATACAGTTTCCTTCGGC.........................................................................................................22140.2130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAAAAAAA-AACAAAAAAAAGA..........................................................................................................................................................................................................................................................................................21140.2130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................ACGCATCACTGTACATTGGCTG................22140.2130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................C-GCTTGTATAACCCTAGCGACGTC.......................................24200.2040000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TG-TTTGTGTTGCGCC-GCTTGTATAAC...................................................26100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................TGT----ATGTG-TTTGTGTTGCGCC-GCT...........................................................24100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................................................................................................................................TTTCCTTCGGCAAA-ATCAAGT..............................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TG-TTTGTGTTGCGCC-GCTTGTATAA....................................................25100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TTGTGTTGCGCC-GCTTGTATAACCCT................................................26100.2020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................TTTCCTTCGGCAAA-ATCAAGTAAG...........................................................................................24200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................ACCCTAGCGACGTCGACGCATCACT............................25200.2040000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................G-TTTGTGTTGCGCC-GCTTGTATAACCC.................................................27100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................T----ATGTG-TTTGTGTTGCGCC-GCA...........................................................22100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................AAGTAAGCATGT----ATGTG-TTTG........................................................................21200.2040000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................TGT----ATGTG-TTTGTGTTGCGCC-G.............................................................22100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
..................................................................................................................................................................................................................................TG-TTTGTGTTGCGCC-GCTTGTATAACCC.................................................28100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................ATCAAGTAAGCATGT----ATGTG-T...........................................................................21200.2040000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
..................................................................................................................................................................................................................................TG-TTTGTGTTGCGCC-GCTTGT........................................................21100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000100000000
....AAAAA-AACAAAAAAAAGAAA........................................................................................................................................................................................................................................................................................2050.2010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TAACCCTAGCGACGTCGACGC..................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................AAGTAAGCATGT----ATGTG-TTTGTG......................................................................23200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................T----ATGTG-TTTGTGTTGCGCC-GCAA..........................................................23100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
........................................................................................................................................................................................................................................................TATAACCCTAGCGACGTCGACGCAT................................25200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TCACTGTACATTGGCTGCCGCCAAATA......27160.1930000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................AA-------AA------------------------------------------A-A--AATTTGCACAGTGATACAGT...................................................................................................................26110.1820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000
..........................................................................................................................A------------------------------------------A-A--AATTTGCACAGTGATAC......................................................................................................................20110.1820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................CATCACTGTACATTGGCT.................18170.1830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................ATCACTGTACATTGGCTGCCG.............21170.1830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CATGT----ATGTG-TTTGTGTTGCGC................................................................22120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................TTGCGCC-GCTTGTATAACCCTAGCG............................................25120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................GTTGCGCC-GCTTGTATAACCCTAGC.............................................25120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................ACATTGGCTGCCGCCAAAAGCTGA..24120.1720000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAAAAAAAA-AACAAAAAAAAGA..........................................................................................................................................................................................................................................................................................22120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CATGT----ATGTG-TTTGTGTTGCG.................................................................21120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................................................................................................................TTGCACAGTGATACAGTTTCCTTCGGT.........................................................................................................27120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AAA--------A-A--------AA---AAAGGAAGAAT--------------------------------------------------AAG-------........................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......................................................GAAGAAT--------------------------------------------------AAA-------AA------------------------------------------A-A--AATTTGCACAGT...........................................................................................................................2660.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................TTGCACAGTGATACAGTTTCC...............................................................................................................21120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TTGCGCC-GCTTGTATAACCCTAGCGAA..........................................27120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................TGTTGCGCC-GCTTGTATAACCC.................................................22120.1720000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TTTGCACAGTGATACAGTTTCCTTCG...........................................................................................................26120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................ATTTGCACAGTGATACAGTTTCCTTCGG..........................................................................................................28120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................GTTGCGCC-GCTTGTATAACCC.................................................21120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................................................................................................CACAGTGATACAGTTTCCTTCGG..........................................................................................................23130.1520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACAAATAAA-TACATGAAAAAAAAAA--------A-G---------------------------------AAAAAAAAATATTAA------------------ATAAAAATAA-----------------------------------------------------AA--TTTGTACAAAGTGATACGGTTTCCTTCGGCAAA-ATCAAGTAAGCATGT----ATGTG-CTTGTGTTGCGCC-GCTTGTAAAACCCTTGCGACGTCGAGGCATCAATGTACATTGGCTGCCGCCAAGAGCTGATGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
ACAATTATT-ATTCATAACAATAAAA--------A-A--------AT----------------------------------------------AAAATAATAAATAAAAATTA--------A---------------------------------------------A--TATATACACAGTGATACAGTTTCCTTCGGCAA--ATCAAGTAAGCATGT----ATGTG-TTTGTGTTGCGTC-GCTTGTAAAATTCTTGCGACGTCGGCGCATCACTGCACATTGGCTGCCGCCAAGAGCTGATGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
AAAATTAAT-GAATAAATAAA-----------------------------------------------GAATGCACAAATATTATACAAAAG-------------A----TAA-------AAAATAC---------------------------------------AA--ATTATACACAGTGATACCATTCCCTCTGGGG-------AGTAAACATCT----TTGTG-TTTGTGCTACGCC-GATTGTAAGATTCTCGCCGCGTC--------GATGTGCATTGGGTGTCGCCAAAAGCTGATGSizeHit CountTotal NormTotal
No Reads
droBia1
AAAACAAGAATAC-----T-ATAAGA-AATTAAT-----------------------AAATAAATTAAACCTGCACA-------------------------------------------------------------------------------------------------TACACGGTTATACTGTTCCCTTTGCCAACAATCAAGAAAACATGT----ATGTG-TTTGTGTTACGCCAGCTTGTGAGTTTCTTGCTGCGTC--------GCTGTACATTGGCTGCCGAAGAGAGCTAATGSizeHit CountTotal NormTotal
No Reads
droTak1
AAAAAAAAT-TTA---------------------------------------------------TTTAATCTGCACAAATATAATACAAAACTAAAAAAAAA---A---T-AA-A------AG--------------------------------------------G--TACATACACAGTGAGACAGTTGCCTCCGGCTAATATAAAGTGAACATTC----ATGTG-TTTGTGTTATGCATACTTTTGAAATTATTGCTATGTC--------ACTGTGCATTGGTTGCCGGCGAGAGCTGATGSizeHit CountTotal NormTotal
No Reads
droEle1
AACAAGACA-AAA----TGAATACAA--------A-A--------AT----------------------------------------------AAAATGTAA-ACAAAAATAAA-------AT------------------------------------------A-A--AT-------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAAACGAAT------------------------------------------------GAATAAATTAAACCTGCACAAATATTATACAAAAC-------------A----TAC-------AAAATTA---------------------------------------AA--GTCATACACAGTGATACTGTTCGCTTCGGCACATTTCAAGTAAACATGT----ATTTATTTTGTGTTACGCC-ATTTGTGAAATTCCTGCTAAGTC--------ACTGTGTATTGGCTGCCGCCGAGAGCTGATGSizeHit CountTotal NormTotal
No Reads
droFic1
AATAAAAAC-AGCAATACT-ATAAAAAAAGGAAT-----------------------TACTAAATTAAACCTGCTGAAA--------------------------------------------------------------------------------------------------AA--------------------AAAAAATCAAGTAAACGTCT----ATGTG-CTTATGTTACACCTGCTTGTGAAACTTTTCCTGAGGC--------G--GCAGAGTGGCTGAACAA-------CACGSizeHit CountTotal NormTotal
No Reads
droKik1
ATACTAAAA-AACGAACGAAT------------------------------------GAATAAATTAAAGCTGCACAAATATTACAAAAAAC-------------A----TAA-------AA---------------------------------------------A--ATCACACACAGTGATACTTTTCTCTTCAGAAAAT-----GTAACAATGT----ATGTG-TTTGTATTGCTTTCGCTTGTGAAATTCTTGCTGTGTC---------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
AAACAAGAA-TACAAAACAAAAAAAA--------ACAAAAAAAACACAAAAATGGAAGAATAAATTAAACCTGCACAAATA----------------------------------------------------------------------------------------------------TCATACTGTTCCCTTTGGCAAAAATCAAGCAAACATGTAAGCATGTA-TTTGTGTTACGCC-GCTTGTGAAACTCTTGTTGCGTC--------GCTGTGCAGTGACTGCCGAAAAGAGCTGATGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................TA----------------------------------------------------------------------------------------------------TCATACTGTTCCCTTTGGCAAAA.....................................................................................................2530.331100000
....................AAAAAA--------ACAAAAAAAACACAAAAA.............................................................................................................................................................................................................................................................2430.331010000
.........................................................................................................................................................................................................................................................GAAACTCTTGTTGCGTC--------GCTGTGCAGT.....................2740.251100000
.........................................................................................................................................................................................................................................................GAAACTCTTGTTGCGTC--------GCTGTGCAG......................2640.251100000
...........................................................................................................................................................................................................................................................AACTCTTGTTGCGTC--------GCTGTGCAGTGA...................2740.251100000
......................AAAA--------ACAAAAAAAACACAAAA..............................................................................................................................................................................................................................................................2150.201010000
..................AAAAAAAA--------ACAAAAAAAACAC..................................................................................................................................................................................................................................................................2160.171010000
.......................AAA--------ACAAAAAAAACACAA................................................................................................................................................................................................................................................................18100.101010000
..................................ACAAAAAAAACACAAAAA.............................................................................................................................................................................................................................................................18120.081001000
.....................AAAAA--------ACAAAAAAAACACAG................................................................................................................................................................................................................................................................20200.051010000
..............AAACAAAAAAAA--------ACAAAAAAA......................................................................................................................................................................................................................................................................21200.051010000
...............AACAAAAAAAA--------ACAAAAAA.......................................................................................................................................................................................................................................................................19200.051010000
......................AAAA--------ACAAAAAAAACACT.................................................................................................................................................................................................................................................................18200.051010000
...................AAAAAAA--------ACAAAAAAAACA...................................................................................................................................................................................................................................................................19200.051010000
droBip1
GAATACTAA-AACAAAAGAAAAAAAA--------A-AACAAAAA------AATGGTAGAATAAAATAAACCTGCACAAATA----------------------------------------------------------------------------------------------------TTATACTGTTCCCTTCGGCAAATATCAGGCAAACATGT----ATGTA-TTTGTGTTACGCC-GCTTGTGAAACTCTTGTTGCATC--------GTTGTGCAGTGGCTGCCGCCATGAGCTGATTSizeHit CountTotal NormTotal
No Reads
droWil2
TAAAACACT-CAAAAAAAAAAAAAAA--------A-A--------AT----------------------------------------------ATAGAAAAAAATAAAAA-AA-------AAA--------------------------------------------T--AATAAGGATAATAATACAGAT-----------GT-----ATATTAGTGT----ACGTG-TGTGCAT---------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................TACAGAT-----------GT-----ATATTAGTGT----ACGTG-T...........................................................................25160.06100010
droMoj3
AAAAAGAAA-AAAAAAAAGAATAAAA--------A-A--------CA----------------------------------------------AAAAGGAAA---A---A-AA-AGGGGGAAA--------------------------------------------A--AA-------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AGTTTGACA-AAAAAGGAAAAGAAAA--------AAATTAAAAA------AATAAAAATAT--------------------------------------------------AAA-------AA------------------------------------------A-G--GA-------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/15/2015 at 04:08 PM