ID:

dsi_3426

Coordinate:

x:4287366-4287515 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.4 -1.8 -1.7

Flybase annnotation

exon [x_4287174_4287365_+]; CDS [x_4287174_4287365_+]; intron [x_4287366_4288085_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTTCGAAAACCAACAATTATGCCACGGAGGCCACCGTTCAAGTGAATCGGGTGCGTATTATAGCTCTAAGTACATGTAACTCAGGAAAATCCAAAAGTCGGAAGGAAAAAAAAAATACGGTTACATAATGCGATTTTTGCCAGATAGCAGACGGTAAATGGTGTATTCGTTTGCGTGTGTGTGTGTAAGTGCAGGGTTGCATTTTGCCGGTCAATCCGCTCATTTTCAAATGACAAGGTCACGCAGTAAT
**************************************************************...........................(((.......)))...............*************************************************************************************************************************************
Read size # Mismatch Hit Count Total Norm Total M053
female body
SRR618934
dsim w501 ovaries
SRR902008
ovaries
SRR553488
RT_0-2 hours eggs
SRR553485
Chicharo_3 day-old ovaries
M023
head
M024
male body
M025
embryo
O002
Head
.....................................................................................AAAATCTAAAGGTCGGAAGGA................................................................................................................................................ 21 2 1 2.00 2 0 0 2 0 0 0 0 0 0
..................................................................TAAGTACGTGTAACTCAGGA.................................................................................................................................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................CAGGGTTGCATTTTGCCGGTCT..................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................ATTTTGCCGGTCAATCCG................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
....GAAAACCAACAATTATGCCACGGAG............................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TTGCATTTTGCCGGTCAAT................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1
..TCGAAAACCAACAATTATGCCACGGA.............................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................ATCGGGTGCGTATTATAGCTC........................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0
..TCGAAAACCAACAATTATGCCACGG............................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................................................................GAAGGAAAAAAAAAATA..................................................................................................................................... 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................TGCCACGGAGGCCACCGTTCAAGTGA............................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..TCGAAAACCAACAATTATGCCACG................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0
..............................................................GCTCTAAGTACATGTAACTCAG...................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................GGGAAGGAAAAAAAAAATA..................................................................................................................................... 19 1 3 0.33 1 0 1 0 0 0 0 0 0 0
............................................................................................TATAGTCGGAAAGAAAAAAAAAA....................................................................................................................................... 23 3 4 0.25 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................ACTCTTTTTCAAATGACAAGGA........... 22 3 7 0.14 1 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................GTGTGTAAGCGCAGCGATGC.................................................. 20 3 7 0.14 1 0 1 0 0 0 0 0 0 0
.................................................................................................TCGGGAGGAAGAAAAAAA....................................................................................................................................... 18 2 12 0.08 1 0 0 0 1 0 0 0 0 0
....................................................................................................GAAGGAAAAAAAAAATAT.................................................................................................................................... 18 1 16 0.06 1 0 1 0 0 0 0 0 0 0
...............................................................................................AGTCTGAAGGAAAAA............................................................................................................................................ 15 1 17 0.06 1 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................GTATTCGGTTGCGAGTATG..................................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

AAAGCTTTTGGTTGTTAATACGGTGCCTCCGGTGGCAAGTTCACTTAGCCCACGCATAATATCGAGATTCATGTACATTGAGTCCTTTTAGGTTTTCAGCCTTCCTTTTTTTTTTATGCCAATGTATTACGCTAAAAACGGTCTATCGTCTGCCATTTACCACATAAGCAAACGCACACACACACATTCACGTCCCAACGTAAAACGGCCAGTTAGGCGAGTAAAAGTTTACTGTTCCAGTGCGTCATTA
*************************************************************************************************************************************...........................(((.......)))...............**************************************************************
Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
SRR553488
RT_0-2 hours eggs
M053
female body
SRR618934
dsim w501 ovaries
SRR553485
Chicharo_3 day-old ovaries
SRR902008
ovaries
SRR553487
NRT_0-2 hours eggs
............AGGTAATGCGGTGCCTCCG........................................................................................................................................................................................................................... 19 3 20 6.35 127 127 0 0 0 0 0 0
........................GCCTCCGGTGGCAAGTTCACTT............................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0
AAAGCTTTTGGTTGTTAATAC..................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0
........................GCCTCCGGTGGCAAGTTCA............................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0
.......................................................ATAATATCGAGATTCATGTACATTG.......................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0
..AGCTTTTGGTTGTTAGTACG.................................................................................................................................................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 1 0
..........................CTCCGGTGGCAAGTTCACTTA........................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0
..................................................................ATTCATGTACATTGAGTCCTT................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
.............GGTAATGCGGTGCCTCCG........................................................................................................................................................................................................................... 18 2 11 0.55 6 6 0 0 0 0 0 0
.........................................................................................................ATTTTTTTTGATGCCAATGGAT........................................................................................................................... 22 3 3 0.33 1 0 1 0 0 0 0 0
....................................................................................CTGTTAGGTTTTCAGACTT................................................................................................................................................... 19 2 3 0.33 1 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................................TACGGTTGCAGTGCGTCA... 18 2 6 0.17 1 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................................TACGGTTGCAGTGCGTC.... 17 2 20 0.10 2 0 2 0 0 0 0 0
.....................................................................................................................................................................................................................................TACTGTTGCAGTGGGTCA... 18 2 11 0.09 1 0 1 0 0 0 0 0
................AATGCGGTGCCTCCG........................................................................................................................................................................................................................... 15 1 16 0.06 1 1 0 0 0 0 0 0
............................................................................................................................TAATACGCTAGAAACGG............................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 1
.............GGTGATACGATGCCTCCG........................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:4287316-4287565 + dsi_3426 TTTCGAAAACC---------AACAATTATGCCACGGAGGCCACCGTTCAAGTGAATCGGGTGCGTATT-----ATA-------------------------------------------------------------G--CTCTAAGTACATGTAACTC--AGG--------AAAATC-CAA------------AAGTCGGAAGG-AAAA-AAAA-----A--ATACGGTTACATAAT---GCGATTT-TTGCCA----GATAGCAGACGGTA---------------------AATGG-T-G-TATTCGTTTGCGTGT--------------GTGTG------------------------------T------------------------------G---TAA-G--TGCAGGGTTGCATT-------------------------TTGCCGGTCAATCCGCTCATTTT-CA-AATGACAAGGTCACGCAGTA----AT---------
droSec2 scaffold_4:2133347-2133590 - TTTCGAAAACC---------AACAATTATGCCACGGAGGCCACCGTTCAAGTGAATCGGGTGCGTATT-----ATA-------------------------------------------------------------G--CACTAAGTACATGTAACTC--AGA--------AATATC-CAA------------AAGTCGGAA----GGA-AAAA-----A--ATACGGTTACATAAT---GCGATTT-TTGCCA----GATAGCAAACGGTA---------------------AATGG-GGG-TATTCGTTTGCGT------------------GTG------------------------------T------------------------------G---TAA-G--TGCAGGGTTGCATT-------------------------TTGCCGGTCAATCCGCTCATTTT-CA-AATGACAAGGTCACGCAGTA----AT---------
dm3 chrX:4596876-4597115 + TTTCGAAAACC---------AACAATTATGCCACGGAGGCCACCGTTCAAGTGAATCGGGTGCGTATT-----ATA-------------------------------------------------------------G--CATTAAGTACTTGTAACTC--AGG--------AAAATT-CAA------------AAGTCGGAA----GGG-AAAA-----A--ATACGGTTACATAAT---GCGATTT-TCGCCA----GATAGCAAACGGTT---------------------------------------TGCGTG------TGTGTGT--GTGTG----------------------------TGT------------------------------G---TAA-G--TGCAGGGTTGCATT-------------------------TTGCCGGTCAATCCGCTCATTTT-CA-AATGACAAGGTCACGCAGTA----AT---------
droEre2 scaffold_4690:1973795-1974020 + TTTCAAAAACC---------AACAATTATGCCACGGAAGCCACCATTCAAGTGAATCGGGTGCGTATT-----AAA-------------------------------------------------------------A--CATAAAGTAATTGTATCTT--TG-------------------------------------GAA----GAA-AAAA-----A--ATACGGTTACATAAT---GCGATTT-CTGCCA----GATAGCAA-CGGTT---------------------AATGG-G-G-GACTCGTTTGCGT------------------GTG------------------------------T------------------------------G---TAA-G--TGCAGGGTTGCATT-------------------------TTGCCGGTCAAACCGCTCATTTT-CA-AATGACAAGGTCACGCAGCA----AT---------
droYak3 X:3843543-3843782 - TTTCAAAAACC---------AACAATTATGCCACGGAGGCCACCGTACAAGTGAATCGGGTGCGTATT-----ATATA-----------------------------------------------------------G--CATAAAGCACCTGTATCTC--AG-------------------------------------GA----AGAA----A-----A--AAACGGTTACATAAT---GAGATTT-CTGCCA----GATAGCAA-CGGTT---------------------AATGG-G---GATTCGTTTGCGTGTG--CATGTGCGTGCGCGTG------------------------------T------------------------------G---TAA-G--TGCAGGGTTGCATT-------------------------TTGCCGGTCAAACCGCTCATTTT-TA-AATGACAAGGTCACGCAGCA----AT---------
droEug1 scf7180000409548:374363-374623 + TTTCAAAAACC---------AACAATTATGCCACGGAGGCCACCATTCAAGTGAATCGGGTATGTATC-----ATATA------------------------------------------------------CT------------------ATATCTAACAGA--------A--ATA-C--------T----AAAAAAAGA----AGAC-AAAA-----A-TATAAGATTACATAAT---GCGCTTT-TTGCCA----GATAGCAA-CGGTT---------------------AATGG-G----ATTCATTAGTGTGTA-------GTTT--GTGTG----------------------------CGT------------------------------G---GAG-G--TGCAGGGTTGCATTTGGCGTGTTTTCT--------TAATTTGCCGGTCAACATGTTCATTTTGAA-AATGACAAGGTCACGAAGTA----AT---------
droBia1 scf7180000301703:99484-99738 - TGTCGAGGAGC---------AACAACTATGCCACGGAGGCCACCGTGCAAGTGAACCGGGTGAGTGCT-----GTGCGG--------G-----AAG-GGG-------------------------------GG-----------------TGGCAAGGC--GGC--------AAGGCG-GCA------------AGGTGGCAA----GGT-CGCA-----C-GGTGGCGTTACATAAT---GGGCAA---CGGCGAACAGGGGGCCC-CGGGC---------------------CCC--------------------------------------ATG------------------------------C------------------------------G---CGC-A--TGCAGGGTTGCATTC-GCGTGGTTCTCCCGTCCGCCCGTCCGCCCGTCCGCCTGTCCGTTCCCGATACGGACAAGGTCACGGAGTA----GT---------
droTak1 scf7180000414746:81170-81423 + TCTCAAAGACC---------AATAACTATGCCACGGAGGCCACCATTCAAGTGAATCGGGTAAATATA-----CTATAG--T-----A-----AATAGG----------------------------T---AT------------------TATAGCTG--AG-------------------------AA----------GC----CGAA-AAAA-----A--GGGGGATTACATAAT---GCGCTTT-CTGCCA----GATAGCAA-CGGTT---------------------AATGG-G-G-GATCTGTCAGTGTGT--------GTGT--GTGTG------------------------------T------------------------------G---TAA-ATGTGCAGGGTTGCATTT-GCGTGTTTC----------CATTTTGCCGGTCAATATGTTCATTTT-CA-AATGACAAGGTCACGAAGTA----AT---------
droEle1 scf7180000491011:1709380-1709622 - TTTCAAAATCG---------AACAATTATGCCACGGAGGCCACCATCTCAGTGAACCGGGTAAGTAAG-----ATAT-----ATATTG-----AATATTA-------------------------------ACT------------------ATATAT----GA--------A--ATA-CAA------------AAAAAAAAA----AGA-AAAA-----A--GAAAGATTACATAAT---GCGCTTT-CTGGCA----GATAGCAA-CGGTT---------------------CATTT-TG-----------GTAT----------------GTGTG------------------------------T------------------------------G---TAAAA--TGCAGGGTTGCGTTT------------------------TTGCCGGTCAAT---TTAATTTT-CA-AATGACAAGGTCACGAAGTA----ATCTTTTTTTT
droRho1 scf7180000778083:162697-162929 + CTTCAAAATCG---------AACAATTATGCCACGGAGGCCACCATCTCAGTGAATCGGGTAAGAACT-----ATAAGT--------A-----AAT-TTA-------------------------------ACTGCATAT-------------GATA------T------------------------AC----------GA----CGAA-AAAA-----A-TATAGTATTACATAAT---GCGCTTT-TTGCCA----GATAGCAA-CTGTT---------------------AATTTTTG-----------GTAT----------------GTGTG------------------------------T------------------------------G---TAAAA--TGCAGGGTTGCGTTT------------------------TTGCCGGTCAAT---TTAATTTT-CA-AATGACAAGGTCACGAAGTA----ATCTTTTTTTT
droFic1 scf7180000453775:87964-88226 - TATCAAAAACC---------AACAATTATGCCACGGAGGCCACGATTTCAGTGAATCGGGTAAGAACTGTAACATAT-----C--T----------GTA----------------------------TGTTACT------------------ATATCTAATGG-------------------------AAGCAA--GA--AA----AGAGAAAAA-----A--GTAGTATTACATAAT---GCGCTTT-CTGCCA----GATAGCGG-CGGTT---------------------AATAG-G----TTTCAATAGTGAGT--------------GTGTG--TG--ATTTGA-----------------------------------------------------AAC-ATGCACAGGGTTGCATTT-GCGTGTTTT----------TATTTTGCCGGTCAA---GTTACTTTT-CA-AATGACAAGGTCACGAAGTA----AT---------
droKik1 scf7180000302469:107228-107465 + TTACGAAAACC---------AACAATTATGCCACGGAAGCCACCGTTAAAGTGAATCGGGTAAGTAAA-----TTGT----------A-----AATATTA-------------------------------TCT----AT-------------TATCT------------------------------ATGCAG--AA--AA----ATACCA--------G--AAAGGATTACATAAT---GCGC----------------TAGCAA-CTGTT---------------------AACT------------TTTGCGTGCCTGTGTGTGTGTGCGTGTTTGT----------------------GCGA----------------------------------GCACG-GTGCACAGGGTTGCATTT------------------------TAGCCGGTCAA---GTTAATTTT-GA-AATGACAAGGTCACGCATCATCACAT---------
droAna3 scaffold_12929:3175066-3175349 + dan_853 TGGCAAAAACC---------AACAACTATGCCACGGAGGCCACCATACAAGTGAATCGGGTGAGCATA-----AAA--ATATATACTA--TA-AATACA---------T----ATAT--TA------------T------------------ATACCTAATG-CGTTACATTAGCATACAAAAAATACT----A--------A----AAA-AAAA-----A--AAAGGATTACATAAT---GCGCTTT-CTGGCAAAGAGATAGCAA-TAGTT---------------------ACTAT-GTG-TATGTGTTT----------------------------------TGAGACATCTGTATGTGTGTGT------------------------------G---TGC-GTGCACAGGGTTGCAATT------------------------ATGCCGGTCAAC---GGAATTTC-AA-AACGACAAGGTCACGCAGTC----AG---------
droBip1 scf7180000395568:5519-5741 - TGGCAAAAACC---------AACAACTATGCCACGGAGGCCACCATACAAGTGAATCGGGTGAGCATA-----T-A-------------------------------------------------------------------------------TA------T--------A--ATA-C--------A----AAAAA--AA----ATACCAAAAACTTTC--AAAGGATTACATAAT---GCGCTTT-CTGCCAAAGAGATAGCAA-TAGTT---------------------ACTAT-GTG-TATGT------------------GTTAGTGTGTG----------------------------------------------------------------------TGCACAGGGTTGCATTA-A----------------------ATGCCGGTCAAC---TTAATTTC-AA-AATGACAAGGTCACTCAGTC----AT---------
dp5 XL_group1a:7011407-7011645 + TGGCCAAAACC---------AACAACTATGCCACGGAGGCTACGGTGCAAGTGAATCGCGTAAGTGTT-----GGAGGA--TCGAC----------GGA----------------------------A---AT------------------TAAATCAAATTG-------------------------------------AAA----TCA----C-----C--AACGTATTACATAAT---GCGCTTTACTACCA----GATAACAA-AAGTG---------------------TGTGT-G---------------------TGTGTGTGTGCGT--G------T---------TCTG-----GTGTGT------------------------------G---TGA-GTGCACAGGGTTGCATTG-ACATA----------------------CACACAATGCTCTCACCGT-TA-ACCGGCAATGCCTTCCGTCA----AT---------
droPer2 scaffold_13:1616065-1616290 + TGGCCAAAACC---------AACAACTATGCCACGGAGGCTACGGTGCAAGTGAATCGCGTAAGTGTT-----GGAGGA--TCGAC----------GGA----------------------------A---AT------------------TA--AATC--A----------------------------------------------------C-----C--AACGGATTACATAAT---GCGCTTTACTACCA----GATAGCAA-AAGTG---------------------TGTGT------------------------GTGTGTGTGCGT--G------T---------TCTG-----GTGTGT------------------------------G---TGA-GTGCACAGGGTTGCATTG-ACATA----------------------CACACAATGCTCTCACCGT-TA-ACCGGCAATGCCTTCCGTCA----AT---------
droWil2 scf2_1100000004909:4504916-4505193 - dwi_2713 TCAGCAAAACCAGCACCAACAACAACTATGCCACGGAAGCTACAATCGAAGTGAATCGTGTAAGTCTC-----C-AG-ATCAT-CGC-CCCTC----TCACTCACACAC----ACACTCTCTCTGCGCGATCCT------------------CTGC---------------------C-AAAAAGTGAT----A------AAA-GAAAA--AAAA-----A--AATTGATTACATAATTTTGAATTTG-TTGTGA----CCTAACAA-CGGTGTTTTTCTCCTAAACGGTCTGTTATGG-T-GCCATCTGTTTGTCTGTG--TGTGTGTGTGCGT--GTGTGT----------------------GT----------------------------------CGCTA-ATGCACAGGGTTGCATT---------------------------------------------------------------------------------------
droVir3 scaffold_12970:4137218-4137415 - TCGCAAAGACC---------AACAATTATGCCACGGAAGCGACCGTGCAGGTGAATCGAGTAAGTACA-----TAAAGAGATACA----------------------------------------------CCA--------ACAACTA----------ATC-C--------------------GTTCTAGCTA------AA----AGAA-AAAA-----CGCTAGTGATTACATAAT---GCGTC------------------------------------------------------------------TGTGTGTG--TGTGTGTTT--------------------------------------------------------------------------------GCATGCGTGC------------------------------GTCCGTCCGTCCGTTCATTTT-TG-TATGACCTGATTGCACAG------AG---------
droMoj3 scaffold_6473:8707979-8708249 - TCGCAAAGACC---------AATAATTATGCCACCGAAGCGACCGTGCAAGTGAATCGAGTGAGTATT-----TTAAGGCAGC-AGT-AACAA----TCACCCACCCACCC------------------------CACATCACCAACGA----------ATC--------------------GAGTTCTAGCAA------GC----AGAA-AGAA-----A-TTGCCGATTACATAAT---GTATGC----------------------------------------------------------------TGGTGTGTG--TCTGTGTGTGCGT--GTGTGC--------------------GTCCGTCTGTCC------------ATTA--GTGTATGACCTGA-TTGCGCAGTGTTGCATTT-GCGCG------------------TTGTCGATTAGTTAGTTGCATTG-CC-GGCGCCAAGGTCA----------------------
droGri2 scaffold_15203:9812550-9812827 + TCGCAAAGACC---------AACAACTATGCCACGGAGGCGACCGTGCAGGTTAATCGGGTAAGTAGA-----T-AGGC-C------AAATAG----ACCCCCTCCCACCCCCACCCTC------------G-----------CTACTA----------TTC--------------------ATGTTCTCG---------CAA----AAA-GAAA-----T--TGCCGATTACATAAT---GTGTG--------------------------------------------------------------------CGT------GTGTGTGC--GCGTGTGTGTGT---------GCCT-----G----TGTATCCCTATGTTTGTGCGCAAGATTATGTGACCTGA-CTGCACAGAGTTGCATTT-TTGT---------------CCATTTGTCGATTAGTTGGCTGAATTG-CA-AGCCCCAAGGTCACA----A----GT---------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTTCGAAAACC---------AACAATTATGCCACGGAGGCCACCGTTCAAGTGAATCGGGTGCGTATT-----ATA-------------------------------------------------------------G--CTCTAAGTACATGTAACTC--AGG--------AAAATC-CAA------------AAGTCGGAAGG-AAAA-AAAA-----A--ATACGGTTACATAAT---GCGATTT-TTGCCA----GATAGCAGACGGTA---------------------AATGG-T-G-TATTCGTTTGCGTGT--------------GTGTG------------------------------T------------------------------G---TAA-G--TGCAGGGTTGCATT-------------------------TTGCCGGTCAATCCGCTCATTTT-CA-AATGACAAGGTCACGCAGTA----AT---------SizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................CAGGGTTGCATT-------------------------TTGCCGGTCT....................................................2211.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ATT-------------------------TTGCCGGTCAATCCG...............................................1811.00100000000001000000
....GAAAACC---------AACAATTATGCCACGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCATT-------------------------TTGCCGGTCAAT..................................................1911.00100000100000000000
..TCGAAAACC---------AACAATTATGCCACGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
......................................................ATCGGGTGCGTATT-----ATA-------------------------------------------------------------G--CTC................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
..TCGAAAACC---------AACAATTATGCCACGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
........................................................................................................................................................................................................GAAGG-AAAA-AAAA-----A--ATA.............................................................................................................................................................................................................................................................................................1711.00100000000001000000
............................TGCCACGGAGGCCACCGTTCAAGTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
..TCGAAAACC---------AACAATTATGCCACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.........................................................................................................................................G--CTCTAAGTACATGTAACTC--AG............................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
........................................................................................................................................................................................................GAAGG-AAAA-AAAA-----A--ATAT............................................................................................................................................................................................................................................................................................18160.06100000000001000000
droSec2
TTTCGAAAACC---------AACAATTATGCCACGGAGGCCACCGTTCAAGTGAATCGGGTGCGTATT-----ATA-------------------------------------------------------------G--CACTAAGTACATGTAACTC--AGA--------AATATC-CAA------------AAGTCGGAA----GGA-AAAA-----A--ATACGGTTACATAAT---GCGATTT-TTGCCA----GATAGCAAACGGTA---------------------AATGG-GGG-TATTCGTTTGCGT------------------GTG------------------------------T------------------------------G---TAA-G--TGCAGGGTTGCATT-------------------------TTGCCGGTCAATCCGCTCATTTT-CA-AATGACAAGGTCACGCAGTA----AT---------SizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
........................ATTATGCCACGGAGGCCACCGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020020
.......................................................................................................................................................................................................................................................................GCAAACGGTA---------------------AATGG-GGG-TAT............................................................................................................................................................................................................2111.0010100
.......................................................................................................................................................................................................................................................................GCAAACGGTA---------------------AATGG-GGG-...............................................................................................................................................................................................................1811.0010001
..........................TATGCCACGGAGGCCACCGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.TTCGAAAACC---------AACAATTATGCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
...CGAAAACC---------AACAATTATGCCACGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
......................................GCCACCGTTCAAGTGAATCGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
................................................................................................................................................................................................................................................................................................................................................TG------------------------------T------------------------------G---TAA-G--TGCAGGGTTGCA.........................................................................................2011.0010100
dm3
TTTCGAAAACC---------AACAATTATGCCACGGAGGCCACCGTTCAAGTGAATCGGGTGCGTATT-----ATA-------------------------------------------------------------G--CATTAAGTACTTGTAACTC--AGG--------AAAATT-CAA------------AAGTCGGAA----GGG-AAAA-----A--ATACGGTTACATAAT---GCGATTT-TCGCCA----GATAGCAAACGGTT---------------------------------------TGCGTG------TGTGTGT--GTGTG----------------------------TGT------------------------------G---TAA-G--TGCAGGGTTGCATT-------------------------TTGCCGGTCAATCCGCTCATTTT-CA-AATGACAAGGTCACGCAGTA----AT---------SizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
.......................AATTATGCCACGGAGGCCACCGTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................25118.001800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000621000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CCACGGAGGCCACCGTTCAAGTGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CAATTATGCCACGGAGGCCACCGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATGCCACGGAGGCCACCGTTCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................AATTATGCCACGGAGGCCACCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................AATTATGCCACGGAGGCCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000
.....AAAACC---------AACAATTATGCCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GGCCACCGTTCAAGTGAATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GCCACGGAGGCCACCGTTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AACAATTATGCCACGGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
...............................................................................................................................................................................................................................................................................................................................................GTG----------------------------TGT------------------------------G---TAA-G--TGCAGGG..............................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
.........................................ACCGTTCAAGTGAATCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.................................................AGTGAATCGGGTGCGTATT-----AT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.........................TTATGCCACGGAGGCCACCGTTCAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................................................TGCGTATT-----ATA-------------------------------------------------------------G--CATTAT.............................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................AACAATTATGCCACGGAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TAGCAAACGGTT---------------------------------------TGCGTG------...........................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.................................CGGAGGCCACCGTTCAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TG----------------------------TGT------------------------------G---TAA-G--TGCAGGGTTGCATT-------------------------..............................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................ATGCCACGGAGGCCACCGTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATTATGCCACGGAGGCCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......AAACC---------AACAATTATGCCACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATGCCACGGAGGCCACCGTTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................AATTATGCCACGGAGGCCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TACTTGTAACTC--AGG--------AAAATT-C...........................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AAAACC---------AACAATTATGCCACGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CACCGTTCAAGTGAATCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATTATGCCACGGAGGCCACCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...........................ATGCCACGGAGGCCACCGTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........................TATGCCACGGAGGCCACCGTTCAAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CGTTCAAGTGAATCGGGTGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CACGGAGGCCACCGTTCAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CACGGAGGCCACCGTTCAAGTGAATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................CCACGGAGGCCACCGTTCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................AAATT-CAA------------AAGTCGGAA----GGG-A...........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATGCCACGGAGGCCACCGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TATGCCACGGAGGCCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................CAGGGTTGCATT-------------------------TTGCCG........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................CGGAGGCCACCGTTCAAGTGAATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATTATGCCACGGAGGCCACCGTTCAAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TATGCCACGGAGGCCACCGTTCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................ATT-CAA------------AAGTCGGAA----GGG-AAA.........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCATT-------------------------TTGCCGGTCAATCC................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TATGCCACGGAGGCCACCGTTCAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................TGCCACGGAGGCCACCGTTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GCCACCGTTCAAGTGAATCGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CACGGAGGCCACCGTTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TATGCCACGGAGGCCACCGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GCCACCGTTCAAGTGAATCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AACC---------AACAATTATGCCACGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTATGCCACGGAGGCCACCGTTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CGGAGGCCACCGTTCAAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTATGCCACGGAGGCCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CACGGAGGCCACCGTTCAAGTGAATCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...............................................CAAGTGAATCGGGTGCGTATT-----......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................CCGTTCAAGTGAATCGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TGTGTGT--GTGTG----------------------------TGT------------------------------G---TAA-G--T....................................................................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000004000
......................................................................................................................................................................................................................................................................................................................................TGTGT--GTGTG----------------------------TGT------------------------------G---TAA-G--TG...................................................................................................20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000002000
....................................................................................................................................................................................................................................................................................................................................TGTGTGT--GTGTG----------------------------TGT------------------------------G---TAA-G--.....................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CGTG------TGTGTGT--GTGTG----------------------------TGT------------------------------................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TG------TGTGTGT--GTGTG----------------------------TGT------------------------------G---TAA-........................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.............................................................................................................................................................................................................................................................................................................................G------TGTGTGT--GTGTG----------------------------TGT------------------------------G---TAA-G--.....................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
............................................................................................................................................................................................................................................................................................................................TG------TGTGTGT--GTGTG----------------------------TGT------------------------------G---TAA-G--.....................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000
...............................................................................................................................................................................................................................................................................TT---------------------------------------TGCGTG------TGTGTGT--GTGTG----------------------------T................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
............................................................................................................................................................................................................................................................................................................................TG------TGTGTGT--GTGTG----------------------------TGT------------------------------G---T...........................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TT---------------------------------------TGCGTG------TGTGTGT--GT................................................................................................................................................................................17200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GTG------TGTGTGT--GTGTG----------------------------TGT------------------------------G---TA..........................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................T---------------------------------------TGCGTG------TGTGTGT--GTGTG----------------------------TC...............................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................................................................TGCGTG------TGTGTGT--GTGTG----------------------------.................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TT---------------------------------------TGCGTG------TGTGTGT--GTGT..............................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
droEre2
TTTCAAAAACC---------AACAATTATGCCACGGAAGCCACCATTCAAGTGAATCGGGTGCGTATT-----AAA-------------------------------------------------------------A--CATAAAGTAATTGTATCTT--TG-------------------------------------GAA----GAA-AAAA-----A--ATACGGTTACATAAT---GCGATTT-CTGCCA----GATAGCAA-CGGTT---------------------AATGG-G-G-GACTCGTTTGCGT------------------GTG------------------------------T------------------------------G---TAA-G--TGCAGGGTTGCATT-------------------------TTGCCGGTCAAACCGCTCATTTT-CA-AATGACAAGGTCACGCAGCA----AT---------SizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
..........................TATGCCACGGAAGCCACCATTCAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000110
........................ATTATGCCACGGAAGCCACCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021000010
........................ATTATGCCACGGAAGCCACCATTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
.........................TTATGCCACGGAAGCCACCATTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
.........................TTATGCCACGGAAGCCACCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
......................CAATTATGCCACGGAAGCCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
......................................GCCACCATTCAAGTGAATCGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
....................AACAATTATGCCACGGAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
.......................AATTATGCCACGGAAGCCACCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
........ACC---------AACAATTATGCCACGGAAGCCACCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
..........................................CCATTCAAGTGAATCGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.......AACC---------AACAATTATGCCACGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.......AACC---------AACAATTATGCCACGGAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
...CAAAAACC---------AACAATTATGCCACGGAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000010
.......AACC---------AACAATTATGCCACGGAAGCCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
.............................GCCACGGAAGCCACCATTCAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
droYak3
TTTCAAAAACC---------AACAATTATGCCACGGAGGCCACCGTACAAGTGAATCGGGTGCGTATT-----ATATA-----------------------------------------------------------G--CATAAAGCACCTGTATCTC--AG-------------------------------------GA----AGAA----A-----A--AAACGGTTACATAAT---GAGATTT-CTGCCA----GATAGCAA-CGGTT---------------------AATGG-G---GATTCGTTTGCGTGTG--CATGTGCGTGCGCGTG------------------------------T------------------------------G---TAA-G--TGCAGGGTTGCATT-------------------------TTGCCGGTCAAACCGCTCATTTT-TA-AATGACAAGGTCACGCAGCA----AT---------SizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
.................................CGGAGGCCACCGTACAAGTGAATCGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
...................................................................................................................................................................................................................................................................GATAGCAA-CGGTT---------------------AATGG-G---GA.............................................................................................................................................................................................................2111.00100000010000
...........................................CGTACAAGTGAATCGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
.....................ACAATTATGCCACGGAGGCCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
.......................AATTATGCCACGGAGGCCACCGTAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100001000000
..........................TATGCCACGGAGGCCACCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001000000
..........................................CCGTACAAGTGAATCGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
.......................AATTATGCCACGGAGGCCACCGTACAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
......................CAATTATGCCACGGAGGCCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
........................................................................................................................................................................................................................................................................................................................................CGTGCGCGTG------------------------------T------------------------------G---TAA-G--TGGCT................................................................................................21150.07100000100000
droEug1
TTTCAAAAACC---------AACAATTATGCCACGGAGGCCACCATTCAAGTGAATCGGGTATGTATC-----ATATA------------------------------------------------------CT------------------ATATCTAACAGA--------A--ATA-C--------T----AAAAAAAGA----AGAC-AAAA-----A-TATAAGATTACATAAT---GCGCTTT-TTGCCA----GATAGCAA-CGGTT---------------------AATGG-G----ATTCATTAGTGTGTA-------GTTT--GTGTG----------------------------CGT------------------------------G---GAG-G--TGCAGGGTTGCATTTGGCGTGTTTTCT--------TAATTTGCCGGTCAACATGTTCATTTTGAA-AATGACAAGGTCACGAAGTA----AT---------SizeHit CountTotal NormTotal
No Reads
droBia1
TGTCGAGGAGC---------AACAACTATGCCACGGAGGCCACCGTGCAAGTGAACCGGGTGAGTGCT-----GTGCGG--------G-----AAG-GGG-------------------------------GG-----------------TGGCAAGGC--GGC--------AAGGCG-GCA------------AGGTGGCAA----GGT-CGCA-----C-GGTGGCGTTACATAAT---GGGCAA---CGGCGAACAGGGGGCCC-CGGGC---------------------CCC--------------------------------------ATG------------------------------C------------------------------G---CGC-A--TGCAGGGTTGCATTC-GCGTGGTTCTCCCGTCCGCCCGTCCGCCCGTCCGCCTGTCCGTTCCCGATACGGACAAGGTCACGGAGTA----GT---------SizeHit CountTotal NormTotal
No Reads
droTak1
TCTCAAAGACC---------AATAACTATGCCACGGAGGCCACCATTCAAGTGAATCGGGTAAATATA-----CTATAG--T-----A-----AATAGG----------------------------T---AT------------------TATAGCTG--AG-------------------------AA----------GC----CGAA-AAAA-----A--GGGGGATTACATAAT---GCGCTTT-CTGCCA----GATAGCAA-CGGTT---------------------AATGG-G-G-GATCTGTCAGTGTGT--------GTGT--GTGTG------------------------------T------------------------------G---TAA-ATGTGCAGGGTTGCATTT-GCGTGTTTC----------CATTTTGCCGGTCAATATGTTCATTTT-CA-AATGACAAGGTCACGAAGTA----AT---------SizeHit CountTotal NormTotal
No Reads
droEle1
TTTCAAAATCG---------AACAATTATGCCACGGAGGCCACCATCTCAGTGAACCGGGTAAGTAAG-----ATAT-----ATATTG-----AATATTA-------------------------------ACT------------------ATATAT----GA--------A--ATA-CAA------------AAAAAAAAA----AGA-AAAA-----A--GAAAGATTACATAAT---GCGCTTT-CTGGCA----GATAGCAA-CGGTT---------------------CATTT-TG-----------GTAT----------------GTGTG------------------------------T------------------------------G---TAAAA--TGCAGGGTTGCGTTT------------------------TTGCCGGTCAAT---TTAATTTT-CA-AATGACAAGGTCACGAAGTA----ATCTTTTTTTTSizeHit CountTotal NormTotal
No Reads
droRho1
CTTCAAAATCG---------AACAATTATGCCACGGAGGCCACCATCTCAGTGAATCGGGTAAGAACT-----ATAAGT--------A-----AAT-TTA-------------------------------ACTGCATAT-------------GATA------T------------------------AC----------GA----CGAA-AAAA-----A-TATAGTATTACATAAT---GCGCTTT-TTGCCA----GATAGCAA-CTGTT---------------------AATTTTTG-----------GTAT----------------GTGTG------------------------------T------------------------------G---TAAAA--TGCAGGGTTGCGTTT------------------------TTGCCGGTCAAT---TTAATTTT-CA-AATGACAAGGTCACGAAGTA----ATCTTTTTTTTSizeHit CountTotal NormTotal
No Reads
droFic1
TATCAAAAACC---------AACAATTATGCCACGGAGGCCACGATTTCAGTGAATCGGGTAAGAACTGTAACATAT-----C--T----------GTA----------------------------TGTTACT------------------ATATCTAATGG-------------------------AAGCAA--GA--AA----AGAGAAAAA-----A--GTAGTATTACATAAT---GCGCTTT-CTGCCA----GATAGCGG-CGGTT---------------------AATAG-G----TTTCAATAGTGAGT--------------GTGTG--TG--ATTTGA-----------------------------------------------------AAC-ATGCACAGGGTTGCATTT-GCGTGTTTT----------TATTTTGCCGGTCAA---GTTACTTTT-CA-AATGACAAGGTCACGAAGTA----AT---------SizeHit CountTotal NormTotal
No Reads
droKik1
TTACGAAAACC---------AACAATTATGCCACGGAAGCCACCGTTAAAGTGAATCGGGTAAGTAAA-----TTGT----------A-----AATATTA-------------------------------TCT----AT-------------TATCT------------------------------ATGCAG--AA--AA----ATACCA--------G--AAAGGATTACATAAT---GCGC----------------TAGCAA-CTGTT---------------------AACT------------TTTGCGTGCCTGTGTGTGTGTGCGTGTTTGT----------------------GCGA----------------------------------GCACG-GTGCACAGGGTTGCATTT------------------------TAGCCGGTCAA---GTTAATTTT-GA-AATGACAAGGTCACGCATCATCACAT---------SizeHit CountTotal NormTotal
No Reads
droAna3
TGGCAAAAACC---------AACAACTATGCCACGGAGGCCACCATACAAGTGAATCGGGTGAGCATA-----AAA--ATATATACTA--TA-AATACA---------T----ATAT--TA------------T------------------ATACCTAATG-CGTTACATTAGCATACAAAAAATACT----A--------A----AAA-AAAA-----A--AAAGGATTACATAAT---GCGCTTT-CTGGCAAAGAGATAGCAA-TAGTT---------------------ACTAT-GTG-TATGTGTTT----------------------------------TGAGACATCTGTATGTGTGTGT------------------------------G---TGC-GTGCACAGGGTTGCAATT------------------------ATGCCGGTCAAC---GGAATTTC-AA-AACGACAAGGTCACGCAGTC----AG---------SizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
........................ACTATGCCACGGAGGCCACCATACAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002110000
........................ACTATGCCACGGAGGCCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
........................ACTATGCCACGGAGGCCACCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
....................AACAACTATGCCACGGAGGCCACCATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.......AACC---------AACAACTATGCCACGGAGGCCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010
............................TGCCACGGAGGCCACCATACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
........ACC---------AACAACTATGCCACGGAGGCCACCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
.......................AACTATGCCACGGAGGCCACCATACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
................................ACGGAGGCCACCATACAAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
........ACC---------AACAACTATGCCACGGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.......................AACTATGCCACGGAGGCCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.....................ACAACTATGCCACGGAGGCCACCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100
...........................................................................................................................................................................................................................................................................................................................................................................GTGTGT------------------------------G---TGC-GTGCACAGGGTTGC..........................................................................................2411.001000100
.........................CTATGCCACGGAGGCCACCATACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
........................ACTATGCCACGGAGGCCACCATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
........................................CACCATACAAGTGAATCGGCCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.......................AACTATGCCACGGAGGCCACCATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
........................ACTATGCCACGGAGGCCACCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100
....................AACAACTATGCCACGGAGGCCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..........................TATGCCACGGAGGCCACCATAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
....AAAAACC---------AACAACTATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
droBip1
TGGCAAAAACC---------AACAACTATGCCACGGAGGCCACCATACAAGTGAATCGGGTGAGCATA-----T-A-------------------------------------------------------------------------------TA------T--------A--ATA-C--------A----AAAAA--AA----ATACCAAAAACTTTC--AAAGGATTACATAAT---GCGCTTT-CTGCCAAAGAGATAGCAA-TAGTT---------------------ACTAT-GTG-TATGT------------------GTTAGTGTGTG----------------------------------------------------------------------TGCACAGGGTTGCATTA-A----------------------ATGCCGGTCAAC---TTAATTTC-AA-AATGACAAGGTCACTCAGTC----AT---------SizeHit CountTotal NormTotal
No Reads
dp5
TGGCCAAAACC---------AACAACTATGCCACGGAGGCTACGGTGCAAGTGAATCGCGTAAGTGTT-----GGAGGA--TCGAC----------GGA----------------------------A---AT------------------TAAATCAAATTG-------------------------------------AAA----TCA----C-----C--AACGTATTACATAAT---GCGCTTTACTACCA----GATAACAA-AAGTG---------------------TGTGT-G---------------------TGTGTGTGTGCGT--G------T---------TCTG-----GTGTGT------------------------------G---TGA-GTGCACAGGGTTGCATTG-ACATA----------------------CACACAATGCTCTCACCGT-TA-ACCGGCAATGCCTTCCGTCA----AT---------SizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
.......AACC---------AACAACTATGCCACGGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020100010000
..............................CCACGGAGGCTACGGTGCAAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
........................ACTATGCCACGGAGGCTACGGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..............................CCACGGAGGCTACGGTGCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
............................TGCCACGGAGGCTACGGTGCAAGTGAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
....................AACAACTATGCCACGGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................CACGGAGGCTACGGTGCAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......AAACC---------AACAACTATGCCACGGAGGCTAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010001000000
....................................AGGCTACGGTGCAAGTGAATCGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000000
....................AACAACTATGCCACGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...........................ATGCCACGGAGGCTACGGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
....CAAAACC---------AACAACTATGCCACGGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
............................TGCCACGGAGGCTACGGTGCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
...............................CACGGAGGCTACGGTGCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
........................ACTATGCCACGGAGGCTACGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010000
.....AAAACC---------AACAACTATGCCACGGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
droPer2
TGGCCAAAACC---------AACAACTATGCCACGGAGGCTACGGTGCAAGTGAATCGCGTAAGTGTT-----GGAGGA--TCGAC----------GGA----------------------------A---AT------------------TA--AATC--A----------------------------------------------------C-----C--AACGGATTACATAAT---GCGCTTTACTACCA----GATAGCAA-AAGTG---------------------TGTGT------------------------GTGTGTGTGCGT--G------T---------TCTG-----GTGTGT------------------------------G---TGA-GTGCACAGGGTTGCATTG-ACATA----------------------CACACAATGCTCTCACCGT-TA-ACCGGCAATGCCTTCCGTCA----AT---------SizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
........ACC---------AACAACTATGCCACGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.........................CTATGCCACGGAGGCTACGGTGCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...........................ATGCCACGGAGGCTACGGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.....................ACAACTATGCCACGGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
.................................CGGAGGCTACGGTGCAAGTGAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
......................................GCTACGGTGCAAGTGAATCGCCCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
...............................................................................................................................................................................................................................................................................TG---------------------TGTGT------------------------GTGTGTGTGCGT--G------T---------T............................................................................................................................................................22200.051000001
droWil2
TCAGCAAAACCAGCACCAACAACAACTATGCCACGGAAGCTACAATCGAAGTGAATCGTGTAAGTCTC-----C-AG-ATCAT-CGC-CCCTC----TCACTCACACAC----ACACTCTCTCTGCGCGATCCT------------------CTGC---------------------C-AAAAAGTGAT----A------AAA-GAAAA--AAAA-----A--AATTGATTACATAATTTTGAATTTG-TTGTGA----CCTAACAA-CGGTGTTTTTCTCCTAAACGGTCTGTTATGG-T-GCCATCTGTTTGTCTGTG--TGTGTGTGTGCGT--GTGTGT----------------------GT----------------------------------CGCTA-ATGCACAGGGTTGCATT---------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
....................AACAACTATGCCACGGAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00300210
........................ACTATGCCACGGAAGCTACAATCGAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200200
.......................AACTATGCCACGGAAGCTACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00201100
.....................ACAACTATGCCACGGAAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
...................CAACAACTATGCCACGGAAGCTACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.......AACCAGCACCAACAACAACTATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
.......................................CTACAATCGAAGTGAATCGTCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...................CAACAACTATGCCACGGAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.......................................CTACAATCGAAGTGAATCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..........................................................................................................CAC----ACACTCTCTCTGCGCGAT............................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
...............................CACGGAAGCTACAATCGAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.........................................ACAATCGAAGTGAATCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
......................CAACTATGCCACGGAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..............................CCACGGAAGCTACAATCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
......................................................................................................CACACAC----ACACTCTCTCTGCGCGATC...........................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
..................ACAACAACTATGCCACGGAAGCTACAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010
..........................TATGCCACGGAAGCTACAATCGAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
........................ACTATGCCACGGAAGCTACAATCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
......................CAACTATGCCACGGAAGCTACAATCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.........................CTATGCCACGGAAGCTACAATCGAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
....................AACAACTATGCCACGGAAGCTAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001
...........................ATGCCACGGAAGCTACAATCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.........................CTATGCCACGGAAGCTACAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
........................ACTATGCCACGGAAGCTACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.............................GCCACGGAAGCTACAATCGAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
..............................CCACGGAAGCTACAATCGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
...........................................................................................................................................................................................................................................................................................................................CTGTG--TGTGTGTGTGCGT--GTG...........................................................................................................................................................................21200.05101000
droVir3
TCGCAAAGACC---------AACAATTATGCCACGGAAGCGACCGTGCAGGTGAATCGAGTAAGTACA-----TAAAGAGATACA----------------------------------------------CCA--------ACAACTA----------ATC-C--------------------GTTCTAGCTA------AA----AGAA-AAAA-----CGCTAGTGATTACATAAT---GCGTC------------------------------------------------------------------TGTGTGTG--TGTGTGTTT--------------------------------------------------------------------------------GCATGCGTGC------------------------------GTCCGTCCGTCCGTTCATTTT-TG-TATGACCTGATTGCACAG------AG---------SizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
......................CAATTATGCCACGGAAGCGACCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000010000000000000000000000000000000000000000000000000
........................ATTATGCCACGGAAGCGACCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.......................AATTATGCCACGGAAGCGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................AAA-----CGCTAGTGATTACATAAT---C.............................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
.......GACC---------AACAATTATGCCACGGAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
.........................TTATGCCACGGAAGCGACCGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
...................................GAAGCGACCGTGCAGGTGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
........................ATTATGCCACGGAAGCGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TGTG--TGTGTGTTT--------------------------------------------------------------------------------GCATGCG.............................................................................................2020.501000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................GCGTC------------------------------------------------------------------TGTGTGTG--TGTGTGTT.....................................................................................................................................................................................2160.171001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................AT---GCGTC------------------------------------------------------------------TGTGTGTG--TGT..........................................................................................................................................................................................18100.101000000000000000000000000000000000000000000000000000000000001000
droMoj3
TCGCAAAGACC---------AATAATTATGCCACCGAAGCGACCGTGCAAGTGAATCGAGTGAGTATT-----TTAAGGCAGC-AGT-AACAA----TCACCCACCCACCC------------------------CACATCACCAACGA----------ATC--------------------GAGTTCTAGCAA------GC----AGAA-AGAA-----A-TTGCCGATTACATAAT---GTATGC----------------------------------------------------------------TGGTGTGTG--TCTGTGTGTGCGT--GTGTGC--------------------GTCCGTCTGTCC------------ATTA--GTGTATGACCTGA-TTGCGCAGTGTTGCATTT-GCGCG------------------TTGTCGATTAGTTAGTTGCATTG-CC-GGCGCCAAGGTCA----------------------SizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
........................ATTATGCCACCGAAGCGACCGTGCAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
...................................GAAGCGACCGTGCAAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
.........................TTATGCCACCGAAGCGACCGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100
....................................AAGCGACCGTGCAAGTGAATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
........................ATTATGCCACCGAAGCGACCGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
............................................................................AGGCAGC-AGT-AACAA----TCACCC........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.........................TTATGCCACCGAAGCGACCGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
.......................AATTATGCCACCGAAGCGACCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........................TATGCCACCGAAGCGACCGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..............................CCACCGAAGCGACCGTGCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
....................AATAATTATGCCACCGAAGCGACCGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
............................TGCCACCGAAGCGACCGTGCAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTGTTGCATTT-GCGCG------------------TT............................................................2111.001100000
droGri2
TCGCAAAGACC---------AACAACTATGCCACGGAGGCGACCGTGCAGGTTAATCGGGTAAGTAGA-----T-AGGC-C------AAATAG----ACCCCCTCCCACCCCCACCCTC------------G-----------CTACTA----------TTC--------------------ATGTTCTCG---------CAA----AAA-GAAA-----T--TGCCGATTACATAAT---GTGTG--------------------------------------------------------------------CGT------GTGTGTGC--GCGTGTGTGTGT---------GCCT-----G----TGTATCCCTATGTTTGTGCGCAAGATTATGTGACCTGA-CTGCACAGAGTTGCATTT-TTGT---------------CCATTTGTCGATTAGTTGGCTGAATTG-CA-AGCCCCAAGGTCACA----A----GT---------SizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
.......................AACTATGCCACGGAGGCGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110

Generated: 05/18/2015 at 04:24 PM