ID:

dsi_3394

 Coordinate:

x:16610720-16610947 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [x_16610948_16611087_+]; CDS [x_16610948_16611087_+]; exon [x_16610404_16610719_+]; CDS [x_16610404_16610719_+]; intron [x_16610720_16610947_+]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GAAGGACTCTGCCAACTCGGACAAGAAGGCCAAATCGCGGAACAAAGAGGGTAAGTTAGCACAGTGATCAACGCCCCTTGTTGTTCGTTTACTGATATGAAATCCGATTCAACATTTCACGCTGCAATTCAAATATATTTAATGCTGACATCACGTAAGTCTCTGTTACCCAGCAGAAGTTTAGGTTTATTTTTTAAACTACCCTTTTGTTTTTTAACAATCAGAAATGAAGACCATTAACGCACTCCGTAACTAATTTAAAAAATGTTCGTCCCTAGGTCTCTTGGAACCTAAAGTTCTCATTGAGGGCGTGTTGTTTCGGGCCAGA
**************************************************.((((((((.((((((..(((((.....)))))(((((((.(((((.((((((..........))))))........................(((.((.....)).)))...(((((...((((((((....((((((.....))))))...))))))))...)))))))))))))))))...........))))..))..))))))))..................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
........................................................................................................................................................................................................................................................GTAACTACTGTAGAAAATGTT........................................................... 21 3 5 10.60 53 46 5 2 0 0 0 0 0
................................AATCGCGGAACAAAGAGGGTCTC................................................................................................................................................................................................................................................................................. 23 3 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................TCATTGAGGGCGTGTTGTTTCGGGC.... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
..........GCCAACTCGGACAAGAAGGC.......................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0
..............ACTCGGACAAGAAGGCCAAA...................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0
..................GGACAAGAAGGCCTAATCGCGGAAC............................................................................................................................................................................................................................................................................................. 25 1 1 1.00 1 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................TCATTGAGGGCGTGTTGTTTCGGG..... 24 0 1 1.00 1 0 0 1 0 0 0 0 0
.CAGGACTCTGCCAACTCG..................................................................................................................................................................................................................................................................................................................... 18 1 2 0.50 1 0 0 1 0 0 0 0 0
.....ACTCTGCCAACTCGCA................................................................................................................................................................................................................................................................................................................... 16 1 7 0.43 3 3 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................TCTTTGAGGGCGTGTTCTT.......... 19 2 3 0.33 1 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................................GTAACTACTGTAGAAAATGT............................................................ 20 3 14 0.14 2 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................TCTTTGAGGGCGTGTTA............ 17 2 12 0.08 1 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................TTTATTTGTTAGACTACC............................................................................................................................. 18 2 13 0.08 1 0 0 0 0 0 0 0 1
..AGGACTCTGCAAACACG..................................................................................................................................................................................................................................................................................................................... 17 2 14 0.07 1 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................TCTTTGAGGGCGTGT.............. 15 1 15 0.07 1 0 0 0 0 0 1 0 0
..........................................................GGACGGTGATCAACGC.............................................................................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................CGTCTTTTAACCATCAGA....................................................................................................... 18 3 20 0.05 1 0 0 1 0 0 0 0 0

Anti-sense strand reads

CTTCCTGAGACGGTTGAGCCTGTTCTTCCGGTTTAGCGCCTTGTTTCTCCCATTCAATCGTGTCACTAGTTGCGGGGAACAACAAGCAAATGACTATACTTTAGGCTAAGTTGTAAAGTGCGACGTTAAGTTTATATAAATTACGACTGTAGTGCATTCAGAGACAATGGGTCGTCTTCAAATCCAAATAAAAAATTTGATGGGAAAACAAAAAATTGTTAGTCTTTACTTCTGGTAATTGCGTGAGGCATTGATTAAATTTTTTACAAGCAGGGATCCAGAGAACCTTGGATTTCAAGAGTAACTCCCGCACAACAAAGCCCGGTCT
**************************************************.((((((((.((((((..(((((.....)))))(((((((.(((((.((((((..........))))))........................(((.((.....)).)))...(((((...((((((((....((((((.....))))))...))))))))...)))))))))))))))))...........))))..))..))))))))..................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
.............TTGAGCCTGGTCTTCCG.......................................................................................................................................................................................................................................................................................................... 17 1 1 3.00 3 3 0 0 0 0
................AGCCTGGTCTTCCGGTCTA..................................................................................................................................................................................................................................................................................................... 19 2 2 2.50 5 5 0 0 0 0
...........TGTTGAGCCTGGTCTTCCG.......................................................................................................................................................................................................................................................................................................... 19 2 1 2.00 2 2 0 0 0 0
...........TGTTGAGCCTGGTCTTCCGGTC....................................................................................................................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
..........ATGTTGAGCCTGGTCTTCCGGT........................................................................................................................................................................................................................................................................................................ 22 3 1 1.00 1 1 0 0 0 0
.........AATGTTGAGCCTGGTCTTCCG.......................................................................................................................................................................................................................................................................................................... 21 3 2 1.00 2 2 0 0 0 0
.............TTGAGCCTGGTCTTCCGGT........................................................................................................................................................................................................................................................................................................ 19 1 1 1.00 1 1 0 0 0 0
..............TGAGCCTGGTCTTCCG.......................................................................................................................................................................................................................................................................................................... 16 1 1 1.00 1 1 0 0 0 0
..............................................................................................................TTGCAAAGTGTGACGTTAATTTT................................................................................................................................................................................................... 23 3 2 0.50 1 0 1 0 0 0
.............TTGAGCCTGGTCTTCC........................................................................................................................................................................................................................................................................................................... 16 1 2 0.50 1 1 0 0 0 0
................AGCCTGGTCTTCCGGTCT...................................................................................................................................................................................................................................................................................................... 18 2 7 0.29 2 2 0 0 0 0
............................................................................................................................................................................................................AAAAAAAAAAATTGTTAGTATT...................................................................................................... 22 2 5 0.20 1 0 0 1 0 0
...CCTGGGGCGGTTAAGCCTG.................................................................................................................................................................................................................................................................................................................. 19 3 12 0.08 1 0 1 0 0 0
...............................................................................................................................................................................................................................................TGCGTTAGGCAGTGAT......................................................................... 16 2 16 0.06 1 0 0 0 1 0
......................................................................................................................................................................................................................................................................................AAGCGAACCTTGGCTTTCAA.............................. 20 3 18 0.06 1 0 0 0 0 1
..........ATGTTGAGCCTGGTCTTCC........................................................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:16610670-16610997 + dsi_3394 GAAGGACTCTGCCAACTCGGACAAGAAGGCCAAATCGCGGAACAAAGAGGGTAAGTTAGCA----------------------------------------------------------------------CAGTGATCA--------ACGCCCCTTGTTGT---TCGTTTACTGATA--TGAAA--TCCGATT--CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTTCACGCTG--CAATTCAAATATAT----------------------TTAATG--C-----TGACATCACGTAAGT--CTCTGTTA--CCCAGCAGAAGTTTAG----GTTT-------------------------------------------------------------------------ATTTTTTAAACTAC---CCT-TTTGTTTTTTAACAATCAGA--------------------------AATGAAGACCATTAA-------------C------GCACTCCGTAACTAATTTAA--A---AAA----TGT--TCGTCCC-TAGGT---CTCTTGGAACCTAAAGTTCTCATTGAGGGCGTGTTGTTTCGGGCCAGA
droSec2 scaffold_17:1340285-1340611 + AAAGGACTCTGCCAACTCGGACAAGAAGGCCAAATCGCGGAACAAAGAGGGTAAGTTAGCA----------------------------------------------------------------------TAGTGATCA--------ACGCCCCTTGTTGT---TCGTTTACTGATA--TGAAA--TCCGATT--CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTTCACGCTG--CAATTCAAAAATAT----------------------TTAATG--C-----TGACATCACGTAAGT--CTCTGTTA--CCCAGCAGAAGTTTAG----GTTT-------------------------------------------------------------------------TTTTTT-ATACTAC---CCT-TTTGTTTTTTAACAATCAGA--------------------------AATGAAGACCATTAA-------------C------GCACTCCGTAACTAATTTAA--A---AAA----TGT--TCGTCCT-TAGGT---CTCTTGGAACCTAAAGTTCTCATTGAGGGCGTGTTGTTTCGGGCCAGA
dm3 chrX:17497455-17497778 + GAAGGACTCTGCCAACTCGGACAAGAAGGCCAAATCGCGGAACAAAGAGGGTAAGTTAGCA----------------------------------------------------------------------CAGTTGTCA--------ACGCCCCTTGTTGT---TCGTTTACTGATA--TGGAA--ACCGATT--CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTTCACGCTG--CAATTCAAATCTAT----------------------TTAATG--C-----TGACATCACGTAAGT--CTCTGTTA--CCCAGCAGATGTTTAG----GTTT-------------------------------------------------------------------------ATT----AAACTAC---CCT-TATGTGTATTAACAATCAGA--------------------------AATGAAGACCATTAA-------------C------GCACTTCGTAACTAATTTAA--A---TAA----TGT--TCGTTCT-TAGGT---CTCTTGGAACCCAAAGTTCTCATTGAGGGCGTGTTGTTTCGGGCCAGA
droEre2 scaffold_4690:7834943-7835251 + GAAGGACTCTGCCAACTCGGACAAGAAGGCCAAATCTCGGAACAAAGAGGGTAAGTTAGCA----------------------------------------------------------------------CAGTAATCA--------ACGCCCCTGGTTGT---AAGCTTACTGATA--TGGAA--ACCGATT--CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTTCACGCTG--CAATCCGTATATAT--------------------ATTAAATG--C-----TGATATCACGTAAGT--CTCTGTTA--CCCAGCAGATGTTTCG----GTTT-------------------------------------------------------------------------ATTTTTAAAACTACCACCCTATTTGTTTATTGGCAATCAGA--------------------------AACTAAGACCATTA-------------------------------------------------A----TGT--TCGTCCC-TAGGT---CTCTTGGAACCCAAAGTTCTCATTGAGGGCGTGCTGTTTCGGGCCAGA
droYak3 X:16125220-16125538 + GAAGGATTCTGCGAACTCGGACAAGAAGGCCAAATCTCGAAACAAAGAGGGTAAGTTAGCAG----------------------------------------------------------------------AGTGATCA--------ACGCCCCTGTTTGT---TCGTTTACTGATA--TCAAA--ACCGATT--AA------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTTCACGCTG--CAATCCGTATATAC----------------------TAAATG--C-----TGATATCACGTAAGT--CTCTGTTA--CCCAGCAGATGTTTTG----GTTT-------------------------------------------------------------------------ATTTTTAAAACTTA---TAT-TTTGTTTATTAACAATCAGA--------------------------AATGAAG----------------------------GCACTCCGTAATTAATTTTA--A---TAT----GGT--TCGTTCT-TAGGT---CTCTTGGAACCCAAAGTTCTCATTGAGGGCGTGTTGTTTCGGGCCAGA
droEug1 scf7180000409271:566003-566327 + GAAGGATTCGGCGAACTCGGATAAGAAAGCCAAGTCGCGAAACAAGGAGGGTAAGTGAAAAG-------------GA--ATTT-----------TATATTG--------------------TT--------TTTTGAGCT--------ACGCCCCCGGTTGGGTTTTTGTTACTGATA--TCGAA--ACATATT--CG------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTTCACGCTG--CAATCTGTGCCAAT----------------------TTAATG--C-----TGATATCACGTAAGT--CTCTGTTT--CTCAGCGATCGTTGTGCTAGATTT------GCTTTCG------------------------------------------------AAGTTTGGATTTA-----------------------------------------------------------------------------TAAA-------------G------CCATTTCTTAACTAAT-------AATATTTTTATAT--TTCCCTT-CAGGT---CTTTTGGAACCCAAAGTTCTCATTGAGGGCGTGCTATTCCGGGCCAGA
droBia1 scf7180000301760:3512279-3512633 + GAAGGACTCGGCCAACTCGGACAAGAAGGCCAAGTCGCGAAACAAGGAGGGTAAGTGCGCAG-------------GA--GTTT-----------GAAATGT---------------------TCTCCCACACAATGGGCA--------ACGCCCCCGGTTGG---TTTTTTACTGATA--TCGAA--ACCCATT--CG------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTCCACGCTG--CCATCTGTGCGCAA----------------------ATAATG--C-----TGATATCATGTAAGT--CGCTATTT--CCGAGCGGATGTTTCT----GCGA-TTTT--------------------------------------------------------------------AATTTC-GAAGCAC---ACT-TTCGTTGAATACAAATTGAA--------------------------AATTGAGCCCCTTGC-------------C------A-----TGGAATCATTTCTAAT-AATAGATG--TAT--TCGCCCC-TAGGT---CTCTTGGAACCCAAAGTTCTGATCGAGGGCGTGCTGTTCCGGGCCAGA
droTak1 scf7180000415210:536734-537043 - GAAGGATTCGGCCAACTCGGACAAGAAGGCCAAGTCGCGCAACAAGGAGGGTAAGTGAGAG-AATGCGG------GG--ATTT-----------TAAAT---------------------------------------------------G------GTTCGTCTTTTTTTACTGATA--TCGAA--AACCATT--CG------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATTCCACGCTG--CAATCTGTACGCAT----------------------TAAATGTGA-----TGATATCATGTAAGT--CGCTGTTTTTTC------------------------------------------------------------------------------------------------------AGGCCAC---TTTTTCTTTTT----ATTATAAGA--------------------------CATTAAATCCC-----------------CGTAGAGACATTCCTTAAATAAT-------AATA-A----TATTCCCGTATT-TAGGT---CTCTTGGAACCCAAAGTTCTCATTGAGGGCGTGCTCTTTCGGGCCCGG
droEle1 scf7180000491001:242730-242959 - GAAGGACTCGGCCAACTCGGACAAGAAGGCCAAGTCGCGCAACAAGGAGGGTAAGCAAACTA-------------AA--ACTCTTCATATA-------TATGCATATA--------------TA-------TACTGGGCA--------ACGCCCCCCGTTTTG--TCGTTTACTGATAACTCGAA--CCAAACT--CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTTCACGCTG--CAATCTGTATTTTA-------------------TGTGATA----TTTCTGTGACATTATGTAAGT--CTCTATTT--TCAGGCGAAGATTTAG----CTAT-------------------------------------------------------------------------ATTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779333:719744-720116 + GAAGGACTCGGCCAACTCGGACAAAAAGGCCAAGTCGCGAAACAAGGAGGGTAAGCATTCTG-------------GA--ATTC-----------TATGTAG--------------------TTT-------TACTGGGCA--------ACGCCCCCGGTTTT---TCGTTTACTGATA--TCGAA--ATCCATT--CG------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CTTTTCACGCTG--CAATCTGTACCCAT----------------------TTAATG--C-----TGATATTATGTAAGT--CGCTGTTG--CCAGGCGAAGATTTCG----CAATATTTTTGTTTATGAGTGCACTTTGTTTATAAAAAGCAAACCTCTTTTTAATTAAAACCGTAAACCAT---------------------------------------------GAACCT--------------------------------ATTAC-------------C------CCATTCCCTCAATAAC-------AATAAGTATACAT--TACCCTT-TAGGT---CTCTTGGAACCCAAAGTTCTCATCGAGGGCGTGTTGTTCCGGGCCAGA
droFic1 scf7180000454077:702446-702780 - GAAGGATTCGGCCAATTCCGATAAGAAGGCCAAGTCGCGCAACAAGGAGGGTAAGTGAATAG-------------GA--GTTT-----------TATATACTCATATAGATTATACGTTTTTTT-------TACTGGGCA--------ACGCCCCTTGTTAT---TCGTTTACTGATA--TCGAAAAACCCATT--TG------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTTCACGCTG--CAATTTGCATTAAC----------------------CCAATG--C-----TGATATAATGTAAGT--CTCTGACT---CCAGTAAAGGCTTAC----CTAT-------------------------------------------------------------------------T-----------------AT-TTTGTT----------------------------------------------GATAAAAAA-------------C------ACATTCCATGACTTAT-------AACACGTGTACTT--TCCCCTTAAAGGT---CTCTTGGAACCCAAAGTTCTCATTGAGGGTGTGCTATTCCGTGCCCGA
droKik1 scf7180000302230:551472-551635 - CAAGGATTCGGCCAACTCCGACAAAAAAGCCAAGTCGCGCAACAAGGAGGGTGAGTAATAG-------------------------------------------------------------------------TTGGCTTTCTAGCATTAGA--TTGCGTTG--CAGCTTACTAATT----------ACCATTACGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTTCACGCTGCGCAATTTGTAAACAT---TTT----------------TGAATG--------TGATGCCATGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13248:2925850-2926129 - CAAGGACTCGGCCAACTCGGACAAGAAGGCCAAGTCGAGGAACAAGGAGGGTGAGTTTTCA-AATCA-G-------AGATA---TCATATT-------TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTATATAATTTTATAT-CCTTAAATGCTG--CATTTCTTTGAAATTCTTTTTCATTGAAAT---TGTGATAT--------------TATCGTAAGT--T-CT----------------------------------------------------------------------------------------------------------------------------------------------GAAAGGATTATGCTGAAATTCTCAGG--AAGGATAACTGATAATGTTCTGAATCCT---------------------------------------------CATGCCA-TAGGTCGTCTTTGGGAACCCAAAGTTCTGATCGAGGGCGTGCTGTTCCGGGCCAGG
droBip1 scf7180000396429:91699-91984 + TAAGGACTCGGCCAACTCGGACAAGAAGGCCAAGTCCAGAAACAAGGAGGGTAAGTTTCAG-AATCAAG-------AGAAA----------ACTTA-------------------------------------AAAAA-----------------------------------AAATG--TCAAA--AAATTTTCCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-AATTTCATGCTG--CATTTCTTTGAATT--TTTTTCAATGA------TATGATATG--A-----TGAT-CAACGTAAGT--T-----------------------------------------------------------------------------------------------------------------------------------------------CTGAAAGGATGACGTTGAAGGTCCTTGAAAAAGGGTGACTGAT--TGTTTTTAATATT---------------------------------------------CAATCCA-TAGGTCGACTTTGGGAACCCAAAGTCCTGATCGAGGGCGTGTTGTTTCGGGCCAGA
dp5 XL_group1e:7682020-7682221 - AAAGGACTCGGCCAACAGCGACAAGAAAGCCAAGTCGCGGAACAAAGAGGGTGAGTGGGGAGGGTACGGCACTCGGA--AC-------------------------------A------------------CTCGGAACG--------ACGCCCCCCGT----------TTACTGCTG-----------------------------------------------------------------------------------------------------------CTGTTGT-------GGTTCCATTTGTACTGATTATCTCTTTCTCTCTCTCTCT----------CGAATATCCTACATTTTAA-CATTTCACGCTG--CAATCCGCACACTT----------------------TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_13:874363-874628 + AAAGGACTCGGCCAATAGCGACAAGAAAGCCAAGTCGCGGAACAAGGAGGGTGAGTGGGGAGGGAACGGCACTCGGA--AC-------------------------------A------------------CTCGGAACG--------ACGCCCCCCGT----------TTACTGCTG-----------------------------------------------------------------------------------------------------------CTGTTGT-------GGTTCCATTTGTACTGATTATCTCTCTCTCTCTCTCTCTCTCTCTATCTCGAATATCCTACATTTTAA-CATTTCACGCTG--CAATCCGCACACTTTTCCACCCATTTACATATTTGTGATGTG--C------GGCGTCATGTAAGTGTCTCTGTCT--CCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004909:8660937-8661284 + TAAAGATTCGGCAAATAGTGACCGGAAAGCCAAAACGCGCAACAAGGAGGGTAAGTAAAGCCCTCCCTCCC-CCAAA--ACTCCTTAAATAT--TA----TT-------------------------------A----------------------GTATAT---ATGTTACATAGAA--TTTAA--TTCAATT--CTATTTTGTATGCTGCATTTAAATATTAATCATTTGTCGTATGTCTGTGTCATGTAAGTGTTTTATCCGCCCCCCAACATTTATTGAAACTTTTCGATTAGTGAGTTCTA---ATTCTCAGTGTCTCTCTCTCTCTCTCTCTCTCTTTCTCTC---------------------------GCTC--TATGTCTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTGTT-TAGGT---TTATTGGAACCAAAAGTATTAATCGAAGGCGTTTTATTCCGTGCCAAG
droVir3 scaffold_12970:5640029-5640081 - T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGT---TTCTTGGAACCCAAAGTGCTAATTGAGGGCGTTCTTTTTCGCGCCCGC
droMoj3 scaffold_6473:16017782-16017833 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGT---TTCTTGGAACCCAAAGTGCTTATTGAGGGCGTACTTTTTCGGGCCCGC
droGri2 scaffold_15203:7702401-7702463 + TGGTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAT-CAGGT---TTATTGGAACCCAAAGTGCTCATCGAAGGCGTTCTGTTTCGTGCCCGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAAGGACTCTGCCAACTCGGACAAGAAGGCCAAATCGCGGAACAAAGAGGGTAAGTTAGCA----------------------------------------------------------------------CAGTGATCA--------ACGCCCCTTGTTGT---TCGTTTACTGATA--TGAAA--TCCGATT--CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTTCACGCTG--CAATTCAAATATAT----------------------TTAATG--C-----TGACATCACGTAAGT--CTCTGTTA--CCCAGCAGAAGTTTAG----GTTT-------------------------------------------------------------------------ATTTTTTAAACTAC---CCT-TTTGTTTTTTAACAATCAGA--------------------------AATGAAGACCATTAA-------------C------GCACTCCGTAACTAATTTAA--A---AAA----TGT--TCGTCCC-TAGGT---CTCTTGGAACCTAAAGTTCTCATTGAGGGCGTGTTGTTTCGGGCCAGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................AATCGCGGAACAAAGAGGGTCTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTGAGGGCGTGTTGTTTCGGGC....2511.00100000010000000000
..........GCCAACTCGGACAAGAAGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
..............ACTCGGACAAGAAGGCCAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTGAGGGCGTGTTGTTTCGGG.....2411.00100000000010000000
droSec2
AAAGGACTCTGCCAACTCGGACAAGAAGGCCAAATCGCGGAACAAAGAGGGTAAGTTAGCA----------------------------------------------------------------------TAGTGATCA--------ACGCCCCTTGTTGT---TCGTTTACTGATA--TGAAA--TCCGATT--CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTTCACGCTG--CAATTCAAAAATAT----------------------TTAATG--C-----TGACATCACGTAAGT--CTCTGTTA--CCCAGCAGAAGTTTAG----GTTT-------------------------------------------------------------------------TTTTTT-ATACTAC---CCT-TTTGTTTTTTAACAATCAGA--------------------------AATGAAGACCATTAA-------------C------GCACTCCGTAACTAATTTAA--A---AAA----TGT--TCGTCCT-TAGGT---CTCTTGGAACCTAAAGTTCTCATTGAGGGCGTGTTGTTTCGGGCCAGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................AGAAGGCCAAATCGCGGAACAAAGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGGCGTGTTGTTTCGGGCC...2211.0010100
....GACTCTGCCAACTCGGACAAGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
....GACTCTGCCAACTCGGACAAGAAGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
dm3
GAAGGACTCTGCCAACTCGGACAAGAAGGCCAAATCGCGGAACAAAGAGGGTAAGTTAGCA----------------------------------------------------------------------CAGTTGTCA--------ACGCCCCTTGTTGT---TCGTTTACTGATA--TGGAA--ACCGATT--CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTTCACGCTG--CAATTCAAATCTAT----------------------TTAATG--C-----TGACATCACGTAAGT--CTCTGTTA--CCCAGCAGATGTTTAG----GTTT-------------------------------------------------------------------------ATT----AAACTAC---CCT-TATGTGTATTAACAATCAGA--------------------------AATGAAGACCATTAA-------------C------GCACTTCGTAACTAATTTAA--A---TAA----TGT--TCGTTCT-TAGGT---CTCTTGGAACCCAAAGTTCTCATTGAGGGCGTGTTGTTTCGGGCCAGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................AAGAAGGCCAAATCGCGGAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AATCGCGGAACAAAGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000030000000000000000100000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCATTGAGGGCGTGTTGTT..........2113.0030000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGGGCGTGTTGTTTCGGGCC...2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............AACTCGGACAAGAAGGCCAAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AACTCGGACAAGAAGGCCAAATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAACTCGGACAAGAAGGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AATCGCGGAACAAAGAGGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................CAAGAAGGCCAAATCGCGGAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGGGCGTGTTGTTTCGGGCCA..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCATTGAGGGCGTGTTGTTTCGGGC....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CGCGGAACAAAGAGGGTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTTCTCATTGAGGGCGTG...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGGCGTGTTGTTTCGGGCC...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....GACTCTGCCAACTCGGACAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---CTCTTGGAACCCAAAGTTCT............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................GGCCAAATCGCGGAACAAAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................ACAAGAAGGCCAAATCGCGGAACAAAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ATCGCGGAACAAAGAGGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGGCGTGTTGTTTCGGGCCAG.2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CAAATCGCGGAACAAAGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGGGCGTGTTGTTTCGGGC....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGA--------------------------AATGAAGACCATTA...........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGGGCGTGTTGTTTCGGGCCAGA2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGGGCGTGTTGTTTCGGGCCAG.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCGTGTTGTTTCGGGCCA..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................ATCGCGGAACAAAGAGGGTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GAAGGACTCTGCCAACTCGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGCGTGTTGTTTCGGGCCAGA2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................AAGAAGGCCAAATCGCGGAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CTCGGACAAGAAGGCCAAATCGCGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AACTCGGACAAGAAGGCCAAATCGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGGCGTGTTGTTTCG.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGCGTGTTGTTTCGG......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGAGGGCGTGTTGTT..........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
............................GCCAAATCGCGGAACAAAGAGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................CCAAATCGCGGAACAAAGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........CTGCCAACTCGGACAAGAAGGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACCCAAAGTTCTCATTGAGGGCG.................2711.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TCTGCCAACTCGGACAAGAAGGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATTGAGGGCGTGTTGT...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
droEre2
GAAGGACTCTGCCAACTCGGACAAGAAGGCCAAATCTCGGAACAAAGAGGGTAAGTTAGCA----------------------------------------------------------------------CAGTAATCA--------ACGCCCCTGGTTGT---AAGCTTACTGATA--TGGAA--ACCGATT--CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTTCACGCTG--CAATCCGTATATAT--------------------ATTAAATG--C-----TGATATCACGTAAGT--CTCTGTTA--CCCAGCAGATGTTTCG----GTTT-------------------------------------------------------------------------ATTTTTAAAACTACCACCCTATTTGTTTATTGGCAATCAGA--------------------------AACTAAGACCATTA-------------------------------------------------A----TGT--TCGTCCC-TAGGT---CTCTTGGAACCCAAAGTTCTCATTGAGGGCGTGCTGTTTCGGGCCAGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................AAGGCCAAATCTCGGAACAAAGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
......CTCTGCCAACTCGGACAAGAAGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
...............CTCGGACAAGAAGGCCAAATCTCGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT---CTCTTGGAACCCAAAGT...............................1911.0010000010
.........TGCCAACTCGGACAAGAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAATG--C-----TGATATCAC...............................................................................................................................................................................................................................................................................................................................1811.0010000010
GAAGGACTCTGCCAACTCGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
droYak3
GAAGGATTCTGCGAACTCGGACAAGAAGGCCAAATCTCGAAACAAAGAGGGTAAGTTAGCAG----------------------------------------------------------------------AGTGATCA--------ACGCCCCTGTTTGT---TCGTTTACTGATA--TCAAA--ACCGATT--AA------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTTCACGCTG--CAATCCGTATATAC----------------------TAAATG--C-----TGATATCACGTAAGT--CTCTGTTA--CCCAGCAGATGTTTTG----GTTT-------------------------------------------------------------------------ATTTTTAAAACTTA---TAT-TTTGTTTATTAACAATCAGA--------------------------AATGAAG----------------------------GCACTCCGTAATTAATTTTA--A---TAT----GGT--TCGTTCT-TAGGT---CTCTTGGAACCCAAAGTTCTCATTGAGGGCGTGTTGTTTCGGGCCAGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--TCGTTCT-TAGGT---CTCTTGGAACCCA...................................2715.00500000000005
.........TGCGAACTCGGACAAGAAGGCCAAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACGTAAGT--CTCTGTTA--CC...........................................................................................................................................................................................................................................................................................................2111.00110000000000
droEug1
GAAGGATTCGGCGAACTCGGATAAGAAAGCCAAGTCGCGAAACAAGGAGGGTAAGTGAAAAG-------------GA--ATTT-----------TATATTG--------------------TT--------TTTTGAGCT--------ACGCCCCCGGTTGGGTTTTTGTTACTGATA--TCGAA--ACATATT--CG------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTTCACGCTG--CAATCTGTGCCAAT----------------------TTAATG--C-----TGATATCACGTAAGT--CTCTGTTT--CTCAGCGATCGTTGTGCTAGATTT------GCTTTCG------------------------------------------------AAGTTTGGATTTA-----------------------------------------------------------------------------TAAA-------------G------CCATTTCTTAACTAAT-------AATATTTTTATAT--TTCCCTT-CAGGT---CTTTTGGAACCCAAAGTTCTCATTGAGGGCGTGCTATTCCGGGCCAGASizeHit CountTotal NormTotal
No Reads
droBia1
GAAGGACTCGGCCAACTCGGACAAGAAGGCCAAGTCGCGAAACAAGGAGGGTAAGTGCGCAG-------------GA--GTTT-----------GAAATGT---------------------TCTCCCACACAATGGGCA--------ACGCCCCCGGTTGG---TTTTTTACTGATA--TCGAA--ACCCATT--CG------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTCCACGCTG--CCATCTGTGCGCAA----------------------ATAATG--C-----TGATATCATGTAAGT--CGCTATTT--CCGAGCGGATGTTTCT----GCGA-TTTT--------------------------------------------------------------------AATTTC-GAAGCAC---ACT-TTCGTTGAATACAAATTGAA--------------------------AATTGAGCCCCTTGC-------------C------A-----TGGAATCATTTCTAAT-AATAGATG--TAT--TCGCCCC-TAGGT---CTCTTGGAACCCAAAGTTCTGATCGAGGGCGTGCTGTTCCGGGCCAGASizeHit CountTotal NormTotal
No Reads
droTak1
GAAGGATTCGGCCAACTCGGACAAGAAGGCCAAGTCGCGCAACAAGGAGGGTAAGTGAGAG-AATGCGG------GG--ATTT-----------TAAAT---------------------------------------------------G------GTTCGTCTTTTTTTACTGATA--TCGAA--AACCATT--CG------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATTCCACGCTG--CAATCTGTACGCAT----------------------TAAATGTGA-----TGATATCATGTAAGT--CGCTGTTTTTTC------------------------------------------------------------------------------------------------------AGGCCAC---TTTTTCTTTTT----ATTATAAGA--------------------------CATTAAATCCC-----------------CGTAGAGACATTCCTTAAATAAT-------AATA-A----TATTCCCGTATT-TAGGT---CTCTTGGAACCCAAAGTTCTCATTGAGGGCGTGCTCTTTCGGGCCCGGSizeHit CountTotal NormTotal
No Reads
droEle1
GAAGGACTCGGCCAACTCGGACAAGAAGGCCAAGTCGCGCAACAAGGAGGGTAAGCAAACTA-------------AA--ACTCTTCATATA-------TATGCATATA--------------TA-------TACTGGGCA--------ACGCCCCCCGTTTTG--TCGTTTACTGATAACTCGAA--CCAAACT--CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTTCACGCTG--CAATCTGTATTTTA-------------------TGTGATA----TTTCTGTGACATTATGTAAGT--CTCTATTT--TCAGGCGAAGATTTAG----CTAT-------------------------------------------------------------------------ATTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GAAGGACTCGGCCAACTCGGACAAAAAGGCCAAGTCGCGAAACAAGGAGGGTAAGCATTCTG-------------GA--ATTC-----------TATGTAG--------------------TTT-------TACTGGGCA--------ACGCCCCCGGTTTT---TCGTTTACTGATA--TCGAA--ATCCATT--CG------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CTTTTCACGCTG--CAATCTGTACCCAT----------------------TTAATG--C-----TGATATTATGTAAGT--CGCTGTTG--CCAGGCGAAGATTTCG----CAATATTTTTGTTTATGAGTGCACTTTGTTTATAAAAAGCAAACCTCTTTTTAATTAAAACCGTAAACCAT---------------------------------------------GAACCT--------------------------------ATTAC-------------C------CCATTCCCTCAATAAC-------AATAAGTATACAT--TACCCTT-TAGGT---CTCTTGGAACCCAAAGTTCTCATCGAGGGCGTGTTGTTCCGGGCCAGASizeHit CountTotal NormTotal
No Reads
droFic1
GAAGGATTCGGCCAATTCCGATAAGAAGGCCAAGTCGCGCAACAAGGAGGGTAAGTGAATAG-------------GA--GTTT-----------TATATACTCATATAGATTATACGTTTTTTT-------TACTGGGCA--------ACGCCCCTTGTTAT---TCGTTTACTGATA--TCGAAAAACCCATT--TG------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTTCACGCTG--CAATTTGCATTAAC----------------------CCAATG--C-----TGATATAATGTAAGT--CTCTGACT---CCAGTAAAGGCTTAC----CTAT-------------------------------------------------------------------------T-----------------AT-TTTGTT----------------------------------------------GATAAAAAA-------------C------ACATTCCATGACTTAT-------AACACGTGTACTT--TCCCCTTAAAGGT---CTCTTGGAACCCAAAGTTCTCATTGAGGGTGTGCTATTCCGTGCCCGASizeHit CountTotal NormTotal
No Reads
droKik1
CAAGGATTCGGCCAACTCCGACAAAAAAGCCAAGTCGCGCAACAAGGAGGGTGAGTAATAG-------------------------------------------------------------------------TTGGCTTTCTAGCATTAGA--TTGCGTTG--CAGCTTACTAATT----------ACCATTACGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CATTTCACGCTGCGCAATTTGTAAACAT---TTT----------------TGAATG--------TGATGCCATGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
CAAGGACTCGGCCAACTCGGACAAGAAGGCCAAGTCGAGGAACAAGGAGGGTGAGTTTTCA-AATCA-G-------AGATA---TCATATT-------TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTATATAATTTTATAT-CCTTAAATGCTG--CATTTCTTTGAAATTCTTTTTCATTGAAAT---TGTGATAT--------------TATCGTAAGT--T-CT----------------------------------------------------------------------------------------------------------------------------------------------GAAAGGATTATGCTGAAATTCTCAGG--AAGGATAACTGATAATGTTCTGAATCCT---------------------------------------------CATGCCA-TAGGTCGTCTTTGGGAACCCAAAGTTCTGATCGAGGGCGTGCTGTTCCGGGCCAGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATCGAGGGCGTGCTGTTCC........2211.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGCTGTTCCGGGCCAG.1911.001100000
.......................AGAAGGCCAAGTCGAGGAACAAGGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
....GACTCGGCCAACTCGGACAAGAAGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
..AGGACTCGGCCAACTCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGATCGAGGGCGTGCTGTTCC........2511.001010000
droBip1
TAAGGACTCGGCCAACTCGGACAAGAAGGCCAAGTCCAGAAACAAGGAGGGTAAGTTTCAG-AATCAAG-------AGAAA----------ACTTA-------------------------------------AAAAA-----------------------------------AAATG--TCAAA--AAATTTTCCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-AATTTCATGCTG--CATTTCTTTGAATT--TTTTTCAATGA------TATGATATG--A-----TGAT-CAACGTAAGT--T-----------------------------------------------------------------------------------------------------------------------------------------------CTGAAAGGATGACGTTGAAGGTCCTTGAAAAAGGGTGACTGAT--TGTTTTTAATATT---------------------------------------------CAATCCA-TAGGTCGACTTTGGGAACCCAAAGTCCTGATCGAGGGCGTGTTGTTTCGGGCCAGASizeHit CountTotal NormTotal
No Reads
dp5
AAAGGACTCGGCCAACAGCGACAAGAAAGCCAAGTCGCGGAACAAAGAGGGTGAGTGGGGAGGGTACGGCACTCGGA--AC-------------------------------A------------------CTCGGAACG--------ACGCCCCCCGT----------TTACTGCTG-----------------------------------------------------------------------------------------------------------CTGTTGT-------GGTTCCATTTGTACTGATTATCTCTTTCTCTCTCTCTCT----------CGAATATCCTACATTTTAA-CATTTCACGCTG--CAATCCGCACACTT----------------------TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
AAAGGACTCGGCCAACAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.........................AAAGCCAAGTCGCGGAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......................AAGAAAGCCAAGTCGCGGAACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
............CAACAGCGACAAGAAAGCCAAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
...............CAGCGACAAGAAAGCCAAGTCGCGGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
droPer2
AAAGGACTCGGCCAATAGCGACAAGAAAGCCAAGTCGCGGAACAAGGAGGGTGAGTGGGGAGGGAACGGCACTCGGA--AC-------------------------------A------------------CTCGGAACG--------ACGCCCCCCGT----------TTACTGCTG-----------------------------------------------------------------------------------------------------------CTGTTGT-------GGTTCCATTTGTACTGATTATCTCTCTCTCTCTCTCTCTCTCTCTATCTCGAATATCCTACATTTTAA-CATTTCACGCTG--CAATCCGCACACTTTTCCACCCATTTACATATTTGTGATGTG--C------GGCGTCATGTAAGTGTCTCTGTCT--CCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TAAAGATTCGGCAAATAGTGACCGGAAAGCCAAAACGCGCAACAAGGAGGGTAAGTAAAGCCCTCCCTCCC-CCAAA--ACTCCTTAAATAT--TA----TT-------------------------------A----------------------GTATAT---ATGTTACATAGAA--TTTAA--TTCAATT--CTATTTTGTATGCTGCATTTAAATATTAATCATTTGTCGTATGTCTGTGTCATGTAAGTGTTTTATCCGCCCCCCAACATTTATTGAAACTTTTCGATTAGTGAGTTCTA---ATTCTCAGTGTCTCTCTCTCTCTCTCTCTCTCTTTCTCTC---------------------------GCTC--TATGTCTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTGTT-TAGGT---TTATTGGAACCAAAAGTATTAATCGAAGGCGTTTTATTCCGTGCCAAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............AAATAGTGACCGGAAAGCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
..............ATAGTGACCGGAAAGCCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGT---TTATTGGAACCAACGC................................19160.06101000
droVir3
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGT---TTCTTGGAACCCAAAGTGCTAATTGAGGGCGTTCTTTTTCGCGCCCGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTAATTGAGGGCGTTCT.............2011.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCAAAGTGCTAATTGAGGG...................2111.001000000000000000000000000000000001000000000000000000000000000000
droMoj3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGT---TTCTTGGAACCCAAAGTGCTTATTGAGGGCGTACTTTTTCGGGCCCGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TGGTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAT-CAGGT---TTATTGGAACCCAAAGTGCTCATCGAAGGCGTTCTGTTTCGTGCCCGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGCTCATCGAAGGCGTTCT.............2211.00101

Generated: 05/19/2015 at 05:16 PM