ID:

dsi_338

 Coordinate:

2r:2111898-2111980 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.2 -25.1 -25.1

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. 2l:20094093-20094117 +
  2. dsi_339  2l:23131015-23131039 -
  3. dsi_338  2r:2111955-2111979 +
  4. node_1223:962-986 +
star
  1. dsi_339  2l:23131071-23131096 -
  2. dsi_338  2r:2111898-2111923 +

Sense Strand Reads

TCAATTGGCAGGCAATGGCTTTCGCGAGTATTGAAAAGCGCTTTTGGATATTGGATCACAATATGGCAAACAGGATTTCGCTGATTTAGTCAAATCGCGCAAAGCGTTGTCATCTACAATTATGAGCCGAGAGTACGAAAGCCTAAAAAGTGAGGTGAGGTTCAAAATAAAAGGTCAACAGTT
***********************************.((.(((((((....((((.(((.((((((((((......((((((.(((((....)))))))).)))...))))))).....))).))).)))).....)))))))))...************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 O001
Testis
 SRR902008
ovaries
 M053
female body
 O002
Head
 SRR902009
testis
 M025
embryo
 GSM343915
embryo
...........................................................................................................TGTCATCTACAATTATGAGCCGAGA................................................... 25 0 4 244.75 979 573 361 11 33 1 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAGAGTA................................................ 26 0 4 117.00 468 122 157 93 86 4 0 0 6 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAGA................................................... 23 0 4 107.00 428 143 120 101 54 4 6 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAGAG.................................................. 24 0 4 55.00 220 50 89 25 44 5 3 0 4 0 0 0 0
.....TGGCAGGCAATGGCTTTCGCGAGTA......................................................................................................................................................... 25 0 2 33.00 66 18 36 0 12 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAGAGT................................................. 25 0 4 31.50 126 55 19 31 17 2 0 0 1 0 0 1 0
..................................................TTGGATCACAATATGGCAAACAGGAT........................................................................................................... 26 0 2 17.50 35 4 0 23 7 1 0 0 0 0 0 0 0
..................................................TTGGATCACAAAATGGCAAACAGGAT........................................................................................................... 26 1 2 17.00 34 21 11 0 2 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGCCGAGAGTA................................................ 28 0 4 13.50 54 24 25 0 5 0 0 0 0 0 0 0 0
..................................................TTGGATCACAAAATGGCAAACAGGA............................................................................................................ 25 1 2 13.00 26 21 3 0 2 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGCCGAG.................................................... 24 0 4 12.00 48 21 27 0 0 0 0 0 0 0 0 0 0
..................................................TTGGATCACAATATGGCAAACAGG............................................................................................................. 24 0 2 11.50 23 0 3 11 6 3 0 0 0 0 0 0 0
.....TGGCAAGCAATGGCTTTCGCGAGTA......................................................................................................................................................... 25 1 3 11.00 33 0 1 6 26 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGCCGA..................................................... 23 0 4 11.00 44 12 29 0 3 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGCCGAGAG.................................................. 26 0 4 8.75 35 8 22 1 4 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGCCGAGAGT................................................. 27 0 4 8.25 33 15 16 0 2 0 0 0 0 0 0 0 0
..................................................TTGGATCACAAAATGGCAAACAGG............................................................................................................. 24 1 2 7.50 15 11 4 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAGAGTACGAA............................................ 30 0 3 6.67 20 8 0 8 4 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAG.................................................... 22 0 4 5.50 22 2 9 1 3 0 3 0 0 3 0 0 1
.....TGGCAGGCAATGGCTTTCGCGAGT.......................................................................................................................................................... 24 0 2 5.50 11 4 5 0 2 0 0 0 0 0 0 0 0
..................................................TTGGATCACAATATGGCAAACAGGA............................................................................................................ 25 0 2 5.50 11 2 0 6 1 1 0 0 1 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAGAGTACGA............................................. 29 0 3 4.33 13 4 0 7 2 0 0 0 0 0 0 0 0
............................................................................................................GTCATCTACAATTATGAGCCGAGAGTA................................................ 27 0 4 3.50 14 0 10 0 3 0 0 0 1 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCG...................................................... 20 0 4 3.50 14 0 0 0 0 2 9 0 0 3 0 0 0
...........................................................................................................................................AGCCTAAAAAGTGAGGTGAGGTTCAAAA................ 28 0 2 3.00 6 1 2 2 1 0 0 0 0 0 0 0 0
................................................................................................................TGTATAATTATGAGCCGAGAGTACGAA............................................ 27 2 3 3.00 9 0 0 3 0 0 0 5 0 0 1 0 0
.............AATGGCGTTCAAGAGTATTGA..................................................................................................................................................... 21 3 6 2.33 14 0 1 2 11 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGC........................................................ 18 0 4 2.25 9 0 0 0 0 0 9 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGA..................................................... 21 0 4 2.25 9 0 1 0 0 2 6 0 0 0 0 0 0
......GGCAGGCAATGGCTTTCGCGAGTA......................................................................................................................................................... 24 0 2 2.00 4 3 1 0 0 0 0 0 0 0 0 0 0
.....TGGCAGGCAATGGCTTTCGCGAGTAT........................................................................................................................................................ 26 0 2 2.00 4 1 2 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................GCCTAAAAAGTGAGGTGAGGTTCAAAA................ 27 0 2 2.00 4 1 1 2 0 0 0 0 0 0 0 0 0
.....TGGCAGGCAATGGCTTTCGCGAG........................................................................................................................................................... 23 0 2 2.00 4 2 2 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCTACAATTATGAGCCGAGA................................................... 26 0 4 1.75 7 3 0 2 2 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAAAGTACGAA............................................ 30 1 3 1.67 5 0 0 5 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAAAG.................................................. 24 1 4 1.50 6 1 0 1 4 0 0 0 0 0 0 0 0
..........................................................................................................................................AAGCCTAAAAAGTGAGGTGAGGTTCAAAA................ 29 0 2 1.50 3 2 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGCCGAGAGA................................................. 27 1 4 1.50 6 6 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAGAGA................................................. 25 1 4 1.50 6 3 1 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................TACGAAAGCCTAAAAAGTGAAGTGCGG....................... 27 2 3 1.33 4 0 0 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................TGAAAGCCTAAAAAGTGAGGTG.......................... 22 1 3 1.33 4 0 1 0 3 0 0 0 0 0 0 0 0
.....................................................................................................AAGCGTTGTCATCTACAATTATGAGC........................................................ 26 0 4 1.25 5 1 0 0 1 3 0 0 0 0 0 0 0
.....TGGCAGGCAATGGCTTTCGCGA............................................................................................................................................................ 22 0 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0 0
..................................................TTGGATCACAAAATGGCAAACAGGATT.......................................................................................................... 27 1 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CGAAAGCCTAAAAAGTGAGGTGAGGT...................... 26 0 2 1.00 2 1 0 1 0 0 0 0 0 0 0 0 0
..................................................TTGGATCACAATATGGCAAACAGTATT.......................................................................................................... 27 1 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0 0
......................................................................................................AGCGTTGTCATCTACAATTATGAGCCGA..................................................... 28 0 4 1.00 4 0 3 0 0 1 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGA.......................................................... 16 0 4 1.00 4 1 3 0 0 0 0 0 0 0 0 0 0
........CAGGCAATGGCTTTCGCGAGT.......................................................................................................................................................... 21 0 2 1.00 2 1 0 1 0 0 0 0 0 0 0 0 0
..................................................TTGGATCACAATATGGCAAACAG.............................................................................................................. 23 0 2 1.00 2 0 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................GCCTAAAAAGTGAGGTGAGGTTCAA.................. 25 0 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAGAGTT................................................ 26 1 4 1.00 4 2 0 0 2 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATGTATAATTATGAGCCGAGAGTA................................................ 28 2 5 1.00 5 0 0 2 3 0 0 0 0 0 0 0 0
................................................................................................................TGTATAATTATGAGCCGAGAGTACGAAA........................................... 28 2 3 1.00 3 0 0 1 0 0 0 1 0 0 1 0 0
..................................................TTGGATCACAATATGGCA................................................................................................................... 18 0 2 1.00 2 0 0 0 0 1 1 0 0 0 0 0 0
............................................................................................................GTCATCTACAATTATGAGCCGAGA................................................... 24 0 4 0.75 3 2 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATTAGCCGAGA................................................... 25 1 4 0.75 3 1 2 0 0 0 0 0 0 0 0 0 0
.........................................................................................................GTTGTCATCTACAATTATGAGCCGAGA................................................... 27 0 4 0.75 3 0 2 0 1 0 0 0 0 0 0 0 0
.............................................................TATGGCAAACAGGATTTCGCTGAT.................................................................................................. 24 0 4 0.75 3 0 0 0 2 1 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCC....................................................... 19 0 4 0.75 3 0 0 0 0 0 3 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGCCGAGT................................................... 25 1 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAGAGTAA............................................... 27 1 4 0.75 3 0 2 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAAAGTA................................................ 26 1 4 0.75 3 0 0 1 2 0 0 0 0 0 0 0 0
...........................................................................................................CGTCATCTACAATTATGAGCCGAGA................................................... 25 1 4 0.75 3 2 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAAAGTACGA............................................. 29 1 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................TGAGCCGAGAGTATGAAAGCCTAAAAA.................................. 27 1 3 0.67 2 0 1 0 1 0 0 0 0 0 0 0 0
............................................................................TTCGCTGATTTAGTCAAAT........................................................................................ 19 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0
..................................................................................................................TATAATTATGAGCCGAGAGTACGAA............................................ 25 1 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
........................................................................................................................TATGAGCCGAGAGTATGAAAGCCTAAAA................................... 28 1 3 0.67 2 0 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................CGAGAGTATGAAAGCCTAAAAAGTGAGG............................ 28 1 3 0.67 2 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................TGTATAATTATGAGCCGAGAGTACGA............................................. 26 2 3 0.67 2 0 1 0 0 0 0 1 0 0 0 0 0
..................................................TTGGATCACACTATGGCAAACAGGA............................................................................................................ 25 1 5 0.60 3 1 2 0 0 0 0 0 0 0 0 0 0
..................................................CTGGATCACAATATGGCAAACAGGAT........................................................................................................... 26 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................TGAAAAGCGCTTTTGGAT...................................................................................................................................... 18 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
...................................................TGGATCACAATATGGCAAACAGGATTT......................................................................................................... 27 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAA.................................................... 22 1 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0 0
..................................................TTGGATCACAATATGGC.................................................................................................................... 17 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................AAAGCGTTGTCATCTACAATTATGAGC........................................................ 27 0 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACGATTATGAGCCGAGA................................................... 25 1 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TAAAAAGTGAGGTGAGGTTCAAAA................ 24 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................TTGGATCACAAAATGGCAAACAAG............................................................................................................. 24 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGCAAACAGGATTTCGCTGATTTAGT............................................................................................. 27 0 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0 0
..............................TTGAAAAGCGCTTTTGGATATTGGA................................................................................................................................ 25 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................ATCTACAATTATGAGCCGAGAGTA................................................ 24 0 4 0.50 2 0 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................................GGTCATCTACAATTATGAGCCGAGA................................................... 25 1 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TACGAAAGCCTAAAAAGTGAGGTGAGG....................... 27 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................CGAAAGCCTAAAAAGTGAGGT........................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TGAGGTGAGGTTCAAAATAAAAG.......... 23 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................TCTACAATTATGAGCCGAGA................................................... 20 0 4 0.50 2 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................CGTTGTCATCTACAATTATGAGCCGAGA................................................... 28 0 4 0.50 2 0 1 1 0 0 0 0 0 0 0 0 0
.....TGGCAGGCAATGGCTTTCGCGAGTATT....................................................................................................................................................... 27 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................TTATCACAATATGGCAAACAGGATT.......................................................................................................... 25 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAGAGG................................................. 25 1 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCGAAAGCCTAAAAAGTGAGGTGAGG....................... 27 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................TGAAAGCCTAAAAAGTGAGGTGAGGT...................... 26 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
......................CGCGAGTATTGAAAAGCGCTTTTGGATA..................................................................................................................................... 28 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................TTGGATCACAAAATGGCAAACAG.............................................................................................................. 23 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGGGA................................................... 23 1 4 0.50 2 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGTTGAGA................................................... 23 2 4 0.50 2 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................TAAAAAGTGAGGTGAG........................ 16 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................TCTACAATTATGAGCCGAGAGTA................................................ 23 0 4 0.50 2 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................TCACAATATGGCAAACAGGATTTCGC...................................................................................................... 26 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................TCATTTACAATTATGAGCCGAGAGTA................................................ 26 1 4 0.50 2 1 0 0 0 0 0 0 1 0 0 0 0
..................................................TGGGATCACAAAATGGCAAACAGG............................................................................................................. 24 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................AAAGCGTTGTCATCTACAATTATGA.......................................................... 25 0 4 0.50 2 0 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................TACGAAAGCCTAAAAAGTGAGGTGA......................... 25 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
............................TATTGAAAAGCGCTTTTGGATATTGG................................................................................................................................. 26 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................GTTGTCATCTACAATTATGAGCCGA..................................................... 25 0 4 0.50 2 1 0 0 1 0 0 0 0 0 0 0 0
......GGCAGGCAATGGCTTTCGCGAGTAT........................................................................................................................................................ 25 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.....TGGCAGGCAATGGCT................................................................................................................................................................... 15 0 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAGAGGA................................................ 26 1 4 0.50 2 1 1 0 0 0 0 0 0 0 0 0 0
..................................................TTGTATCACAAAATGGCAAACAGG............................................................................................................. 24 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
TCAATTGGCAGGCAATGGCTTTCGC.............................................................................................................................................................. 25 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................TACAATTATGAGCCGAGA................................................... 18 0 4 0.50 2 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................CGCGCAAAGCGTTGTCATCTACAATT.............................................................. 26 0 4 0.50 2 0 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................AGCGTTGTCATCTACAATTATGAGCC....................................................... 26 0 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0 0
..................................................TTGGATCACATTATGGCAAACAGGA............................................................................................................ 25 1 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GCCGAGAGTATGAAAGCCTAAAAAGTGA.............................. 28 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................ATGTATAATTATGAGCCGAGAGTACGA............................................. 27 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................TATGAGCCGAGAGTATGAAAGCCTAA..................................... 26 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................TGTATAATTATGGGCCGAGAGTACGA............................................. 26 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................TTAGTCAAATCGCGCAAAGCGTTG.......................................................................... 24 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................TTCGCTGATTTAGTCAAATCGCGCA.................................................................................. 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TGAGCCGAGAGTATGAAAGCCTAAAAAG................................. 28 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................GTCATGTATAATTATGAGCCGAGAGTACGAA............................................ 31 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TATAATTATGAGCCGAGAGTACGA............................................. 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................ATGTATAATTATGAGCCGAGAGTACGAA............................................ 28 2 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................TTCGCTGATTTAGTCAAATCG...................................................................................... 21 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................CATGTATAATTATGAGCCGAGAGTACGAAA........................................... 30 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................TGAAAGCCTAAAAAGTGAGGTGCGGTT..................... 27 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
......GGCAAGCAATGGCTTTCGCGAGTA......................................................................................................................................................... 24 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................TGAAAGCCTAAAAAGTGAG............................. 19 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................TTTCGCTGATTTAGTCAAATCGCGCAAAGA.............................................................................. 30 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
..............ATGGCTTTCGCGAGTA......................................................................................................................................................... 16 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................TTGGATCACAATATGGCAAACAGGAA........................................................................................................... 26 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................TATAAGCCGAGAGTATGAAAGCCTAAAA................................... 28 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.....TGGCAAGCAATGGCTTTCGCGAGT.......................................................................................................................................................... 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TTATGAGCCGAGAGTATGAAAGCCTAA..................................... 27 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................GTACGAAAGCCTAAAAAGTGAAGTGC......................... 26 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TACGAAAGCCTAAAAAGTGAAGTGCGGT...................... 28 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAGAT.................................................. 24 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGCCGATAGTA................................................ 28 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCTACAATTATGAGCCGAGAG.................................................. 27 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................CTACAATTATGAGCCGA..................................................... 17 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................CATCTACAATTATGAGCCGAGAGTA................................................ 25 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGGGCCGAGA................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GCATCTACAATTATGAGCCGAGA................................................... 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GTCATCTACAATTATGAGCCGAGAG.................................................. 25 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAACCGAGA................................................... 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAGAGCA................................................ 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCTACAATTATGAGCCGAGCG.................................................. 27 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGATCCGAGA................................................... 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGCAAACAGGATTTCACTGATTTAGT............................................................................................. 27 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................TGTCAGCTACAATTATGAGCCGAGA................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACGATTATGAGCCGAGAGTA................................................ 26 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGTCGAGA................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TACAATTATGAGCCGAG.................................................... 17 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................TATCATCTACAATTATGAGCCGAGA................................................... 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGACCCGAGAGTA................................................ 26 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGCTGAGA................................................... 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................CAGGATTTCGCTGATTTAGTCATATCG...................................................................................... 27 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................TGGCAAACAGGATTTCGCTGA................................................................................................... 21 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAGAGTAAA.............................................. 28 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CTGTCATCTACAATTATGAGCCGAGA................................................... 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TCAGCTACAATTATGAGCCGAGAGTA................................................ 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................AAGCGTTGTCATCTACAATTATGAG......................................................... 25 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................GCATCTACAATTATGAGCCGAGAGTA................................................ 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................CTACAATTATGAGCCGAGA................................................... 19 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGCCGAGAA.................................................. 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................GGCAAACAGGATTTCGCTGATTTATT............................................................................................. 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TACAATTATGAGCCGAGAG.................................................. 19 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................GGCAAACAGGATTTCGCTGAT.................................................................................................. 21 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................AGTCATCTACAATTATGAGCCGAGAGT................................................. 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTGTGAGCCGAGA................................................... 23 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGCCGAGTT.................................................. 26 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GCATCTACAATTATGAGCCGAGAG.................................................. 24 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................ATCTACAATTATGAGCCGAGAG.................................................. 22 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAGAGTG................................................ 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................AGCGTTGTCATCTACAATT.............................................................. 19 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGCCGAGAT.................................................. 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGACGAG.................................................... 24 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTAAAATTATGAGCCGAGA................................................... 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGACCCGAGA................................................... 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTTCATCTACAATTATGAGCCGAGA................................................... 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TGATCTACAATTATGAGCCGAGAG.................................................. 24 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGGCATCTACAATTATGAGCCGAGA................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................ACATCTACAATTATGAGCCGAGAGT................................................. 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................GAGCCGTGAGTACGAA............................................ 16 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................GTTGTCATCTACAATTATGAGCCGAG.................................................... 26 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................GTCATCTACAATTATGAGCCGAGAGTT................................................ 27 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTAGAATTATGAGCCGAGA................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTGCATCTACAATTATGAGCCGAGA................................................... 25 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................AGCGTTGTCATCTACAATTATGAGCCG...................................................... 27 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................AAAGCGTTGTCATCTACAATT.............................................................. 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAAAGT................................................. 25 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGCAGA..................................................... 23 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................ATCGCGCAAAGCGTT........................................................................... 15 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................TCATCAACAATTATGAGCCGAGA................................................... 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TATGGCAAACAGGATTTCGCTGAA.................................................................................................. 24 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................GTTGTCATCTACAATTATGAGC........................................................ 22 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGCCGAGAGAC................................................ 28 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCGAAA................................................... 23 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTAAGAGCCGAGA................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATTTACAATTATGAGCCGAGA................................................... 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGCCTAGAG.................................................. 24 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGGGCCGAGAG.................................................. 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................TCTACAATTATGAGCCGAGAG.................................................. 21 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................TTGGATCACACTATGGCAAACAGGAT........................................................................................................... 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................CAATTATGAGCCGAGAG.................................................. 17 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................CTACAATTATGAGCCGAGAG.................................................. 20 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGA.......................................................... 18 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................TATGGCAAACAGGAT........................................................................................................... 15 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................TGTCATCCACAATTATGAGCCGAGA................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................AAGCGTTGTCATCTACAATTATGA.......................................................... 24 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................CAATTATGAGCCGAGA................................................... 16 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCTACAATTATGAGTCGAGAG.................................................. 24 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGCAAACAGGATTTCGCTGAT.................................................................................................. 22 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGCGGAGA................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTAAAATTATGAGCCGAGA................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................AAGCGTTGTCATCTACAATTATGAGCGTT..................................................... 29 3 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................GTTGTCATCTACAATTATGAGCCGAGAGA................................................. 29 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGCTGAG.................................................... 24 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................ATGGCAAACAGGATTTCGCTGAT.................................................................................................. 23 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................ACATCTACAATTATGAGCCGAGAGTA................................................ 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTACAATTATGAGCCGAGAGTT................................................ 28 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................TTGGATCACATTATGGCAAACAGGAT........................................................................................................... 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................TTGGATCACATTATGGCAAACAG.............................................................................................................. 23 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................AATTATGAGCCGAGA................................................... 15 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................TCATCTATAATTATGAGCCGAGAG.................................................. 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................AAGCGCTTTTGGATATTGGA................................................................................................................................ 20 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................CTATGGCAAACAGGAT........................................................................................................... 16 1 10 0.20 2 0 0 0 0 2 0 0 0 0 0 0 0
......................................................................................................................ATTATGAGCCGAGAG.................................................. 15 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................TCATGTATAATTATGAGCCGAGAGTA................................................ 26 2 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................TTGGATCACACTATGGC.................................................................................................................... 17 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0
...................................AAGCGCTTTTGGATA..................................................................................................................................... 15 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................TATGAGCCGAGAGTA................................................ 15 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................TTCGCTGATTTAGTCA........................................................................................... 16 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................TGTCATCTATAATTATGAGCCGAGA................................................... 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................AAGCGCTTTTGGATATTGGAT............................................................................................................................... 21 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................AAAGCCTAAAAAGTGAGGTGCGGT...................... 24 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................TTGGATCACACTATGGCAAACAGG............................................................................................................. 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................TTGGATCACACTATGGCAAACAG.............................................................................................................. 23 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TAAAAGGTCAACAGCT 16 1 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................AGGTGATGTTCAAAAT............... 16 1 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................CTTTTGAATAATGGATCA............................................................................................................................. 18 2 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
...ATCGTCAGGCAATGCCTTT................................................................................................................................................................. 19 3 14 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................AAGATTTCGTTGATTTAG.............................................................................................. 18 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

AGTTAACCGTCCGTTACCGAAAGCGCTCATAACTTTTCGCGAAAACCTATAACCTAGTGTTATACCGTTTGTCCTAAAGCGACTAAATCAGTTTAGCGCGTTTCGCAACAGTAGATGTTAATACTCGGCTCTCATGCTTTCGGATTTTTCACTCCACTCCAAGTTTTATTTTCCAGTTGTCAA
************************************.((.(((((((....((((.(((.((((((((((......((((((.(((((....)))))))).)))...))))))).....))).))).)))).....)))))))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 M053
female body
 O001
Testis
 M024
male body		 SRR902008
ovaries
 O002
Head
 M023
head
.............................................................................................................................CGGCTCTCATACTTTCGGATTTTTCACT.............................. 28 1 3 155.00 465 343 9 102 0 11 0 0 0 0 0 0 0
....................................TCGCGAAAACCTATAACCTAGTGT........................................................................................................................... 24 0 5 62.20 311 80 83 44 47 37 0 14 3 0 0 3 0
..............................................................................................AGCGCGTTTCGCAACAGTAGATGTT................................................................ 25 0 4 42.25 169 51 23 38 25 10 17 3 0 2 0 0 0
.............................................................................................TAGCGCGTTTCGCAACAGTAGATGTT................................................................ 26 0 4 38.50 154 16 14 20 79 18 3 4 0 0 0 0 0
................................................................................................CGCGTTTCGCAACAGTAGATGTT................................................................ 23 0 4 31.00 124 23 37 23 7 18 9 4 0 3 0 0 0
................................................................................................CGCGTTTCGCAACAGTAGATGTTAAT............................................................. 26 0 4 27.50 110 27 30 11 0 21 20 1 0 0 0 0 0
..............................................................................................AGCGCGTTTCGCAACAGTAGATG.................................................................. 23 0 4 25.75 103 73 25 2 0 3 0 0 0 0 0 0 0
.............................................................................................TAGCGCGTTTCGCAACAGTAGATG.................................................................. 24 0 4 25.75 103 55 46 0 0 2 0 0 0 0 0 0 0
..............................................................................................AGCGCGTTTCGCAACAGTAGATGTTAAT............................................................. 28 0 4 24.25 97 34 27 9 2 12 12 1 0 0 0 0 0
.............................................................................................................................CGCCTCTCATACTTTCGGATTTTTCACT.............................. 28 2 3 21.33 64 0 31 0 0 33 0 0 0 0 0 0 0
..................................................................................................CGTTTCGCAACAGTAGATGTT................................................................ 21 0 4 10.25 41 10 4 8 0 9 1 0 9 0 0 0 0
..............................................................................................................................GGCTCTCATACTTTCGGATTTTTCACT.............................. 27 1 3 9.00 27 13 8 3 0 3 0 0 0 0 0 0 0
............................................................................................TTAGCGCGTTTCGCAACAGTAGATGTT................................................................ 27 0 3 8.00 24 5 1 9 6 2 0 1 0 0 0 0 0
................................................................................................................................CTCTCATACTTTCGGATTTTTCACT.............................. 25 1 3 7.67 23 13 5 1 0 4 0 0 0 0 0 0 0
.................................................................................................GCGTTTCGCAACAGTAGATGTTAAT............................................................. 25 0 4 7.25 29 10 8 3 0 7 0 1 0 0 0 0 0
.......................................................................................................CGCAACAGTAGATGTTAATACTCGGCT..................................................... 27 0 4 7.25 29 5 14 3 1 6 0 0 0 0 0 0 0
.....................................CGCGAAAACCTATAACCTAGTGT........................................................................................................................... 23 0 5 6.60 33 2 1 0 21 0 0 0 9 0 0 0 0
.............................................................................................TAGCGCGTTTCGCAACAGTAG..................................................................... 21 0 4 6.50 26 0 0 0 26 0 0 0 0 0 0 0 0
...............................................................................................GCGCGTTTCGCAACAGTAGATGTTAAT............................................................. 27 0 4 6.25 25 5 11 5 0 4 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATGCTTTCGGATTTTTCACT.............................. 28 0 2 5.50 11 6 0 4 0 1 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATACTTTCGGATTTTTCAC............................... 27 1 3 5.00 15 10 0 5 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TCCAGGTTTTATTTTCCAGTTGTCA. 25 1 3 4.67 14 7 5 0 0 2 0 0 0 0 0 0 0
..............................................................................................TGCGCGTTTCGCAACAGTAGATGTT................................................................ 25 1 4 4.50 18 0 0 2 10 4 0 2 0 0 0 0 0
...............................................................................................GCGCGTTTCGCAACAGTAGATGTT................................................................ 24 0 4 4.00 16 4 2 2 1 6 0 1 0 0 0 0 0
.............................................................................................................................CGGCTCTCATACTTTCGGATTTTTCA................................ 26 1 3 4.00 12 6 0 6 0 0 0 0 0 0 0 0 0
..................................................................................................................................CTCATACTTTCGGATTTTTCACT.............................. 23 1 3 4.00 12 3 6 1 0 2 0 0 0 0 0 0 0
............................................................................................TTAGCGCGTTTCGCAACAGTAGATG.................................................................. 25 0 3 4.00 12 8 4 0 0 0 0 0 0 0 0 0 0
....................................................................TTGTCCTAAAGCGACTAAATCAGTTT......................................................................................... 26 0 3 4.00 12 2 2 6 1 1 0 0 0 0 0 0 0
.....................................................................................................TTCGCAACAGTAGATGTTAAT............................................................. 21 0 4 3.25 13 3 4 0 3 3 0 0 0 0 0 0 0
....................................................................TTGTCCTAAAGCGACTAAATCAGT........................................................................................... 24 0 4 3.25 13 1 1 2 2 7 0 0 0 0 0 0 0
.......................................................................TCCTAAAGCGACTAAAT............................................................................................... 17 0 4 3.00 12 1 0 0 11 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATACTTTCGGATTTTT.................................. 24 1 3 3.00 9 3 0 6 0 0 0 0 0 0 0 0 0
..............................................................................................CGCGCGTTTCGCAACAGTAGATGTT................................................................ 25 1 4 3.00 12 4 0 2 0 3 3 0 0 0 0 0 0
....................................................................TTGTCCTAAAGCGACTAAATCAGTT.......................................................................................... 25 0 3 2.67 8 3 0 4 0 1 0 0 0 0 0 0 0
...................................TTCGCGAAAACCTATAACCTAGTGT........................................................................................................................... 25 0 5 2.60 13 2 1 1 7 0 0 2 0 0 0 0 0
............................................................................................TCAGCGCGTTTCGCAACAGTAGATG.................................................................. 25 1 3 2.33 7 5 2 0 0 0 0 0 0 0 0 0 0
........................................................................................................................ATACTCGGCTCTCATACTTTCGGATT..................................... 26 1 3 2.33 7 1 4 1 0 1 0 0 0 0 0 0 0
..................................................................GTTTGTCCTAAAGCGACTAAATCAGT........................................................................................... 26 0 4 2.00 8 0 1 0 7 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTTTCATGCTTTCGGATTTTTCACT.............................. 28 1 2 2.00 4 0 0 3 0 1 0 0 0 0 0 0 0
AGTTAACCGTCCGTTACCGAAAGCGCT............................................................................................................................................................ 27 0 2 2.00 4 3 1 0 0 0 0 0 0 0 0 0 0
..................................................................GTTTGTCCTAAAGCGACTAAATAAGT........................................................................................... 26 1 4 2.00 8 1 7 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATACTTTCGGATT..................................... 21 1 3 2.00 6 5 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................CGCAACAGTAGATGTTAATACTCGGC...................................................... 26 0 4 2.00 8 2 3 1 0 2 0 0 0 0 0 0 0
.............................................................................................TAGCGCGTTTCGCAACAGTAGATGTTAAT............................................................. 29 0 4 1.75 7 3 3 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................GGCCTCTCATACTTTCGGATTTTTCACT.............................. 28 3 3 1.67 5 0 2 0 0 3 0 0 0 0 0 0 0
......................................GCGAAAACCTATAACCTAGTGT........................................................................................................................... 22 0 5 1.60 8 0 1 1 3 0 0 0 3 0 0 0 0
..................................................................................................................................CTCATGCTTTCGGATTTTTCACTT............................. 24 1 2 1.50 3 0 0 2 0 1 0 0 0 0 0 0 0
AGTTAACCGTTCGTTACCGAAAGCGCT............................................................................................................................................................ 27 1 2 1.50 3 0 1 1 0 1 0 0 0 0 0 0 0
..............................................................................................AGCGCGTTTCGCAACAGTAGATGTTA............................................................... 26 0 4 1.50 6 1 1 1 2 1 0 0 0 0 0 0 0
AGTTAACCGTCCGTTACCGAAAGCGC............................................................................................................................................................. 26 0 2 1.50 3 1 2 0 0 0 0 0 0 0 0 0 0
AGTTAACCGTTCGTTACCGAAAGCGCTC........................................................................................................................................................... 28 1 2 1.50 3 0 0 0 0 3 0 0 0 0 0 0 0
.......................................................................................................CGCAACAGTAGATGTTAATACTCGGCTCT................................................... 29 0 4 1.50 6 3 0 0 0 3 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATGCTTTCGGATTTTTCAC............................... 27 0 2 1.50 3 0 0 3 0 0 0 0 0 0 0 0 0
.............................................................................................TAGCGCGTTTCGCAACAGTAGA.................................................................... 22 0 4 1.50 6 0 0 0 6 0 0 0 0 0 0 0 0
.....................................................................................................TTCGCAACAGTAGATGTTAATACT.......................................................... 24 0 4 1.50 6 2 3 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................CTCATACTTTCGGATTTTTCACTC............................. 24 1 3 1.33 4 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATACTTTCGGATTTTTCACTC............................. 29 1 3 1.33 4 3 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................TCTCATACTTTCGGATTTTTCACT.............................. 24 1 3 1.33 4 2 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................GGCGCGTTTCGCAACAGTAGATGTT................................................................ 25 1 4 1.25 5 0 0 0 1 0 3 0 0 0 0 0 1
..............................................................................................AGCGCGTTTCGCAACAGTAGATGTTAATA............................................................ 29 0 4 1.25 5 1 3 0 0 0 1 0 0 0 0 0 0
...............................................................................................GCGCGTTTCGCAACAGTAGATG.................................................................. 22 0 4 1.25 5 4 1 0 0 0 0 0 0 0 0 0 0
....................................................................TTGTCCTAAAGCGACTAAATCA............................................................................................. 22 0 4 1.25 5 0 0 0 5 0 0 0 0 0 0 0 0
...................................................................TTTGTCCTAAAGCGACTAAATCAGT........................................................................................... 25 0 4 1.25 5 0 1 0 0 4 0 0 0 0 0 0 0
................................................................CCGTTTGTCCTAAAGCGACTAAATCAGT........................................................................................... 28 0 4 1.25 5 0 0 0 0 2 0 3 0 0 0 0 0
................................................................................................CGCGTTTCGCAACAGTAGATGTTAATA............................................................ 27 0 4 1.25 5 2 0 0 0 1 2 0 0 0 0 0 0
............................................................................................................CAGTAGATGTTAATACTCGGCTCTCAT................................................ 27 0 4 1.25 5 3 0 0 0 2 0 0 0 0 0 0 0
................................................................................................CGCGTTTCGCAACAGTAGATGTTAATACT.......................................................... 29 0 4 1.25 5 0 1 1 0 3 0 0 0 0 0 0 0
.....................................................................................................TTCGCAACAGTAGATGTTAATACTCGGCT..................................................... 29 0 4 1.25 5 3 0 1 0 1 0 0 0 0 0 0 0
...............................................................ACCGTTTGTCCTAAAGCGACTAAATAAGT........................................................................................... 29 1 4 1.25 5 1 3 0 0 1 0 0 0 0 0 0 0
.....................................................................TGTCCTAAAGCGACTAAATCA............................................................................................. 21 0 4 1.25 5 0 0 0 5 0 0 0 0 0 0 0 0
..................................................................................................CGTTTCGCAACAGTAGATGTTAAT............................................................. 24 0 4 1.25 5 1 2 0 0 2 0 0 0 0 0 0 0
............................................................................................................................................CGGATTTTTCACTCCACTCCAAGTT.................. 25 0 2 1.00 2 0 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................GTTTCGCAACAGTAGATGTT................................................................ 20 0 4 1.00 4 0 0 0 0 1 0 0 3 0 0 0 0
............................................................................................ATAGCGCGTTTCGCAACAGTAGATG.................................................................. 25 1 4 1.00 4 1 3 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TCCAAGTTTTATTTTCCAGTTGTCA. 25 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0
......CCGTCCGTTACCGAAAGCGCTCATAA....................................................................................................................................................... 26 0 2 1.00 2 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................GCTCTCATACTTTCGGATTTTTCACT.............................. 26 1 3 1.00 3 3 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TTAGCGCGTTTCGCAACAGTAGATGTTAAT............................................................. 30 0 3 1.00 3 2 0 1 0 0 0 0 0 0 0 0 0
....................................................................TTGTCCTAAAGCGACTAAATAAGT........................................................................................... 24 1 4 1.00 4 1 3 0 0 0 0 0 0 0 0 0 0
......................................................................................................TCGCAACAGTAGATGTTAAT............................................................. 20 0 4 1.00 4 1 3 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATGCTTTCGGATTTTT.................................. 24 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................CTCATGCTTTCGGATTTTTCACTCCACT......................... 28 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CCACTCCAAGTTTTATTTTCCAGTTGTCA. 29 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATACTTTCGGATTTTTTACT.............................. 28 2 3 1.00 3 2 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................GGCTCTCATACTTTCGGATTTTT.................................. 23 1 3 1.00 3 2 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATGCTTTCGGATTTTTCA................................ 26 0 2 1.00 2 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................GTTTGTCCTAAAGCGA..................................................................................................... 16 0 4 1.00 4 0 0 0 4 0 0 0 0 0 0 0 0
...........................................................................................................................CTCGGCTCTCATACTTTCGGATTTTTCACT.............................. 30 1 3 1.00 3 2 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................CCACTCCAAGTTTTATTTTCCAGT...... 24 0 2 1.00 2 1 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................CGGCTCTCATGCTTTCGGATTTTTCACTT............................. 29 1 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0 0
....AACCGTCCGTTACCGAAAGCGCTCATAA....................................................................................................................................................... 28 0 2 1.00 2 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CTCCACTCCAAGTTTTATTTTCCAGT...... 26 0 2 1.00 2 1 0 0 0 0 0 1 0 0 0 0 0
................................................................................................CGCGTTTCGCAACAGTAGATG.................................................................. 21 0 4 1.00 4 3 1 0 0 0 0 0 0 0 0 0 0
.....................................CGCGAAAACCTATAACCTAG.............................................................................................................................. 20 0 5 0.80 4 0 0 0 1 0 0 0 3 0 0 0 0
..........................................AAACCTATAACCTAGTGT........................................................................................................................... 18 0 5 0.80 4 0 0 0 0 0 0 0 4 0 0 0 0
...............................................................................................TCGCGTTTCGCAACAGTAGATGTT................................................................ 24 1 4 0.75 3 0 1 1 0 1 0 0 0 0 0 0 0
.............................................................................................CAGCGCGTTTCGCAACAGTAGATGTT................................................................ 26 1 4 0.75 3 0 0 0 0 0 1 0 0 2 0 0 0
.................................................................................................GCGTTTCGCAACAGTAGATGTTAATACT.......................................................... 28 0 4 0.75 3 1 0 1 0 1 0 0 0 0 0 0 0
................................................................................................CGCGTTTCGCAACAGTAGATGTTAATAC........................................................... 28 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TAGCGCGTTTCGCAACAGTAGATGT................................................................. 25 0 4 0.75 3 0 1 1 1 0 0 0 0 0 0 0 0
.......................................................................................................CGCAACAGTAGATGTT................................................................ 16 0 4 0.75 3 2 0 0 1 0 0 0 0 0 0 0 0
....................................................................TTGTCCTAAAGCGACTAAATCAG............................................................................................ 23 0 4 0.75 3 0 0 0 3 0 0 0 0 0 0 0 0
..............................................................................................AGCGCGTTTCGCAACAGTAGATGTTAA.............................................................. 27 0 4 0.75 3 0 3 0 0 0 0 0 0 0 0 0 0
....................................................................................................TTTCGCAACAGTAGATGTT................................................................ 19 0 4 0.75 3 0 0 0 0 0 0 0 3 0 0 0 0
............................................................................................................................TCGGCTCTCATACTTTCGGATTTTTCACT.............................. 29 1 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATACTTTCGGATTTTTCACG.............................. 28 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................AGGCTCTCATACTTTCGGATTTTTCACT.............................. 28 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TCATACTTTCGGATTTTTCACTC............................. 23 1 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0
..................................................................................................................................................................GTTTTATTTTCCAGTTGTCA. 20 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0
.............................................................................................................................CGGTTCTCATACTTTCGGATTTTTCACT.............................. 28 2 3 0.67 2 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................AGATGTTAATACTCGGCTTTCATGCT............................................. 26 1 3 0.67 2 0 0 0 0 0 0 0 0 0 2 0 0
.............................................................................................................................CGGCTCTCATATTTTCGGATTTTTCACT.............................. 28 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATACTTTCGGATTTTCCACT.............................. 28 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
.......................................CGAAAACCTATAACCTAGTGT........................................................................................................................... 21 0 5 0.60 3 0 0 0 0 0 0 0 3 0 0 0 0
.........................................AAAACCTATAACCTAGTGT........................................................................................................................... 19 0 5 0.60 3 0 0 0 0 0 0 0 3 0 0 0 0
........................................GAAAACCTATAACCTAGTGT........................................................................................................................... 20 0 5 0.60 3 0 0 0 0 0 0 0 3 0 0 0 0
.........................................................................................................................................................CCACTCCAAGTTTTATTTTCCAGTTGT... 27 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................GTCCTAAAGCGACTAAAT............................................................................................... 18 0 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0 0
................................................................................................................................CTCTCATGCTTTCGGATTTTTCACTC............................. 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................TTTTTCACTCCACTCCAAGTTTTAT.............. 25 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................TTTCATGCTTTCGGATTTTTCACTCCAC.......................... 28 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................AGTAGATGTTAATACTCGGCTCT................................................... 23 0 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................CAGTAGATGTTAATACTCGGC...................................................... 21 0 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0 0
...................................................................................................................................................TTCACTCCACTCCAAGTTTTATT............. 23 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
........GTCCGTTACCGAAAGCGCTCATAAC...................................................................................................................................................... 25 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
..........CCGTTACCGAAAGCGCTCATAACTT.................................................................................................................................................... 25 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
...TAACCGTCCGTTACCGAAAGCGCTCAT......................................................................................................................................................... 27 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................CTCGGCTCTCATGCTTTCGGATTTTTCACTT............................. 31 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................GCGTTTCGCAACAGTAGATGT................................................................. 21 0 4 0.50 2 0 0 0 1 1 0 0 0 0 0 0 0
.................................................................................................GCGTTTCGCAACAGTAGATGTTAATAC........................................................... 27 0 4 0.50 2 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................GCGTTTCGCAACAGTAGATGTT................................................................ 22 0 4 0.50 2 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................TTTGTCCTAAAGCGACTAAATCAG............................................................................................ 24 0 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0 0
.......CGTCCGTTACCGAAAGCGCTCATAAC...................................................................................................................................................... 26 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................TTCGGATTTTTCACTCCACTCCAAGT................... 26 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................TAGCGCGTTTCGCAACAG........................................................................ 18 0 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0 0
..........................................................AATATACCGTTTGTCCTAAAGCGACTAAAT............................................................................................... 30 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................TTGTCCTAAAGCGACTAAA................................................................................................ 19 0 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0 0
............................................................................................................................................CGGATTTTTCACTCCACTCCAAGTTT................. 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
AGTTAACCGTTCGTTACCGAAAGCGC............................................................................................................................................................. 26 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................TCATAACTTTTCGCGAAAACCTATAACCT................................................................................................................................ 29 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CACTCCACTCCAAGTTTTATTTTCCAGT...... 28 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................TACCGTTTGTCCTAAAGCGACTAAAT............................................................................................... 26 0 4 0.50 2 0 0 0 1 0 0 1 0 0 0 0 0
...........................................................................................TATAGCGCGTTTCGCAACAGTAGATGTT................................................................ 28 1 4 0.50 2 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................CTCCAAGTATTATTTTCCAGTTGTCA. 26 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................AAGCGCGTTTCGCAACAGTAGATGTT................................................................ 26 1 4 0.50 2 0 1 0 1 0 0 0 0 0 0 0 0
....AACCGTTCGTTACCGAAAGCGCTCATAA....................................................................................................................................................... 28 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................TGTCCTAAAGCGACTA.................................................................................................. 16 0 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0 0
.........................................................................CTAAAGCGACTAAATCAGT........................................................................................... 19 0 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0 0
..............................................................................................AGCGCGTTTCGCAACAGTAGAT................................................................... 22 0 4 0.50 2 0 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TTCGCAACAGTAGATGTT................................................................ 18 0 4 0.50 2 0 0 1 1 0 0 0 0 0 0 0 0
....................................TCGCGAAAACCTATAACCTAGTGTT.......................................................................................................................... 25 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................TGTCCTAAAGCGACTAAATAAGT........................................................................................... 23 1 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0 0
....................................................................TTGTCCTAAAGCGACT................................................................................................... 16 0 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0 0
................................................ATAACCTAGTGTTTTACCGTTTGTCCT............................................................................................................ 27 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................AGCGCGTTTCGCAACAGTATATG.................................................................. 23 1 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CTCGGCTCTCATGCTTTCGGAT...................................... 22 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................CGCAACAGTAGATGTTA............................................................... 17 0 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0 0
............................................................................................................................................................CTCCAAGTTTTATTTTCCAGTTGTCA. 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TCATGCTTTCGGATTTTTCACTCCA........................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................AGCGCGTTTCGCAACAGTAGATGT................................................................. 24 0 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0 0
......CCGTTCGTTACCGAAAGCGCTCATAA....................................................................................................................................................... 26 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TCGGATTTTTCACTCCACTCCAAGTTT................. 27 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................TCGCGAAAACCTATAACCTAGTGTTCG........................................................................................................................ 27 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................TGTCCTAAAGCGACTAAATCAGT........................................................................................... 23 0 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0 0
...............................................................ACCGTTTGTCCTAAAGCGACTAAATCAGT........................................................................................... 29 0 4 0.50 2 0 0 0 0 0 0 2 0 0 0 0 0
................................................................................................................AGATGTTAATACTCGGCTCTCAT................................................ 23 0 4 0.50 2 1 1 0 0 0 0 0 0 0 0 0 0
.................................ATTATGCGAAAACCTATAACCTAGTGT........................................................................................................................... 27 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATGCTTTCGGATTTT................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTTTCATGCTTTCGGATTTTTCA................................ 26 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................TTTCGCGAAAACCTATAACCTAGTGT........................................................................................................................... 26 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................GCGTTTCGCAACAGTAGATGTTAATA............................................................ 26 0 4 0.50 2 0 1 0 0 1 0 0 0 0 0 0 0
...TAACCGTCCGTTACCGAAAGCGCTC........................................................................................................................................................... 25 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................GCGCGTTTCGCAACAGTAGATGTTAATAC........................................................... 29 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATGCTTTCGGATTTTTAACTT............................. 29 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................TTTCATGCTTTCGGATTTTTCACTCCA........................... 27 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTCATGCTTTCGGATTTTTCACTCCA........................... 26 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................CGGATTTTTCACTCC............................ 15 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................TTCGCGAAAACCTATA.................................................................................................................................... 16 0 5 0.40 2 0 0 0 2 0 0 0 0 0 0 0 0
....................................TCGCGAAAACCTATAACCTAGTTT........................................................................................................................... 24 1 5 0.40 2 1 0 0 1 0 0 0 0 0 0 0 0
.....................................CGCGAAAACCTATAACCTAGTG............................................................................................................................ 22 0 5 0.40 2 0 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATACTTTCGGATTTTTCATT.............................. 28 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTTCCATACTTTCGGATTTTTCACT.............................. 28 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TTAGCGGGTTTCGCAACAGTAGATGTT................................................................ 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TTCAGGTTTTATTTTCCAGTTGTCG. 25 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................ATACTCGGCTCTCATACTTTCGGATTTT................................... 28 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................TTCGGCTCTCATACTTTCGGATTT.................................... 24 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATACTTTCGGATTT.................................... 22 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACTCGGCTCTCATACTTTCGGATT..................................... 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TCAGTTTAGCGCGTTTCGCAACAGT....................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................CATGCTTTCGGATTTTTCACTTCACGC........................ 27 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................TCGGCTCTCATACTTTCGGATTTTTCAC............................... 28 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGGTCTCATACTTTCGGATTTTTCACT.............................. 28 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................GCCAAGTTTTATTTTCCAGTTGTCA. 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATACTTTTGGATTTTTCACTC............................. 29 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GGGCTCTCATACTTTCGGATTTTTCACT.............................. 28 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGACTCTCATACTTTCGGATTTTTCACT.............................. 28 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATACTTTCGGATTTT................................... 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATACTTTCGGATTTTTCACTG............................. 29 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATACTTTCGGATTTTTCACC.............................. 28 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................TCATACTTTCGGATTTTTCAC............................... 21 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................GGCTCTCATACTTTCGGATTTTTCAC............................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGCCTCTCATACTTTCGGATTTTTCA................................ 26 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................TGGCTCTCATACTTTCGGATTTTTCACT.............................. 28 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................TCAGCGCGTTTCGCAACAGTAGATGTT................................................................ 27 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CTCCACTCCAGGTTTTATTTTCCAGT...... 26 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................GGCTCTCATACTTTCGGATTTTTC................................. 24 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................CTCTCATACTTTCGGATTTTTCA................................ 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GGCTCTCATACTTTCGGATTT.................................... 21 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATACTTCCGGATTTTTCACT.............................. 28 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TTAGCGCGTTTCGCAACA......................................................................... 18 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................CGCCTCTCATACTTTCGGATTTTT.................................. 24 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................GGCTCTCATACTTTCGGATTTT................................... 22 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................CAGTTTAGCGCGTTTCGCAACAGTAGATG.................................................................. 29 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................TTTGTCCTAAAGCGACTAAATCAGTTT......................................................................................... 27 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................GGCTCTCATACTTTCGGATTTTTCACA.............................. 27 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................AAGAAGTTAATACTCGGCTCTCATGCTTT........................................... 29 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGATCTCATACTTTCGGATTTTTCACT.............................. 28 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCGGCTCTCATACTTTCGGATTTTT.................................. 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CTCTCATACTTTCGGATTTTTCACTCCA........................... 28 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................ATTTTCCAGTTGTCAA 16 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................TCTCATACTTTCGGATTTTTCACTCCA........................... 27 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGGCTCTCATACTTTTGGATTTTTCACT.............................. 28 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GGCTCTCATACTTTCGGATT..................................... 20 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................TCTGCGCGTTTCGCAACAGTAGATGTT................................................................ 27 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................CGCCTCTCATACTTTCGGATTTTTCACTC............................. 29 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCGGCTCTCATACTTTCGGATT..................................... 22 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TCCAGGTTTTATTTTCCAGTTGTCAA 26 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................GGCTCTCATACTTTCGGATTTTTCACTC............................. 28 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGCCTCTCATACTTTCGGATTTTTCAC............................... 27 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................TCTGCGCGTTTCGCAACAGTAGATG.................................................................. 25 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................TTTAGCGCGTTTCGCAACAGTAGATG.................................................................. 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................CATACTTTCGGATTTTTCACTC............................. 22 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................TCATACTTTCGGATTTTTCACT.............................. 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GGCTCTCATACTTTCGGATTTTTCACG.............................. 27 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CTCTCATACTTTCGGATTTTTCAGT.............................. 25 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............TTACCGCAAGTTCTCATAACT..................................................................................................................................................... 21 3 6 0.33 2 0 0 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................AGGCTCTCATACTTTAGGATTTTTCACT.............................. 28 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CTCGGCTCTCATACTTTCGGATTTTT.................................. 26 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................AGATGTTAATACTCGGCTCTCATGCT............................................. 26 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................TTTAGGTTTTATTTTCCAGTTGTCA. 25 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................AGATGTTAATACTCGGCTCTCATGCTT............................................ 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................TTGTCCTAAAGCGACTAAAGCAGTT.......................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................TTGTCCTAAAGCGACTAAATCAGGT.......................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGTCTCTCATACTTTCGGATTTTTCACT.............................. 28 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................GCGCGTTTCGCAACAGTAG..................................................................... 19 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................CGCGTTTTGCAACAGTAGATGTT................................................................ 23 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................TGCGCAACAGTAGATGTTAATACTCGGCT..................................................... 29 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TGCGTTTCGCAACAGTAGATGTT................................................................ 23 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................AGCGCGTTTCGCAACAGTAGATTTTAAT............................................................. 28 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................CGTTTCGCAACAGTAGATGTTAATA............................................................ 25 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................AGCGCGTTTCGCAACAGTAGAGG.................................................................. 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TAGCGCGTTTCGCAAC.......................................................................... 16 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................CCGTTTGTCCTAAAGCGACT................................................................................................... 20 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................CACTTCGCAACAGTAGATGTT................................................................ 21 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................AGCGCGTTTCGCAACAGTAGATTTT................................................................ 25 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................GTTTGTCCTAAAGCG...................................................................................................... 15 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TTCGCAACAGTAGATGTTAATAC........................................................... 23 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................CGTTTCGCAACAGTAGATGTTAATAC........................................................... 26 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................TAGCGCGTTTCGCAA........................................................................... 15 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................AGCGCGTTTCGCAACAGTAG..................................................................... 20 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................CGTTTCGCAACAGTAGATGTTA............................................................... 22 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................CTAAAGCGACTAAATCAG............................................................................................ 18 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................GATGTTAATACTCGGCTCTCAT................................................ 22 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................GTTTGTCCTAAAGCGACTAAATCAG............................................................................................ 25 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................CAGCGCGTTTCGCAACAGTAGATG.................................................................. 24 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................CCGCGTTTCGCAACAGTAGATGTT................................................................ 24 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................AGTGCGTTTCGCAACAGTAGATGTTAAT............................................................. 28 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................CAGGTTTATTTTCCAGTTG.... 19 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................TAGCGCGTTTCCCAACAGTAGATG.................................................................. 24 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................GTCCTAAAGCGACTAAATCA............................................................................................. 20 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................AGCGCGTTTCGCGACAGTAGATGTT................................................................ 25 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................AGCGCGTTTCGCAACAATAGATGTT................................................................ 25 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................AGCGCGTTTTGCAACAGTAGATG.................................................................. 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................GCAACAGTAGATGTTAATACTCGGCTCT................................................... 28 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................CGCGTTTTGCAACAGTAGATGTTAAT............................................................. 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................ATTGTCCTAAAGCGACTAAATCAGT........................................................................................... 25 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................TTGTCCTAAAGCGACTAAATCAGTCT......................................................................................... 26 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................GCGAGTTTCGCAAAAGTAGATGTT................................................................ 24 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................TCGCAACAGTAGATGTTAATACTCGG....................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGCGCGTTTCGCAACAGTAGATGTT................................................................ 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CGCAACAGTAGATGTTAATACTCCGCT..................................................... 27 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................TGTCCTAAAGCGACTAA................................................................................................. 17 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................TAGCGCGTTTTGCAACAGTAGATGTT................................................................ 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................GTTTGTCCTAAAGCGACTAAA................................................................................................ 21 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................CCGTTTGTCCTAAAGCGACTAAATCAG............................................................................................ 27 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................TAGCGCGTTTCGCAACAGT....................................................................... 19 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................AGCGCGTTTCGCAACAGTAGATGTTGAT............................................................. 28 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................AGCGCGTTTCGCAACAGTAGAGTTT................................................................ 25 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................CCGTTTGTCCTAAAGCGACTAAATAAGT........................................................................................... 28 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................TTGTCCTAAAGCGACTAAAT............................................................................................... 20 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................CGCAACAGTAGATCTTAATACTCGGCT..................................................... 27 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................TGTTTCGCAACAGTAGATGTT................................................................ 21 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................TCCTAAAGCGACTAAATCAG............................................................................................ 20 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................ATCGCAACAGTAGATGTTAAT............................................................. 21 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................CGTTTGTCCTAAAGCGACTAAATCAGT........................................................................................... 27 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................TCGCGCGTTTCGCAACAGTAGATGTT................................................................ 26 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................GTTTGTCCTAAAGCGAC.................................................................................................... 17 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................CAACAGTAGATGTTAATACTCGGCTCT................................................... 27 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................TTGTCCTAAAGCGAC.................................................................................................... 15 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................GTCCTAAAGCGACTAAATCAG............................................................................................ 21 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................TGTCCTAAAGCGACTAAATCAG............................................................................................ 22 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:2111848-2112030 + dsi_338 T-----CAATTGGCAGGCAATGGCTTTCGCGAGTATTGAAAAGCGCTTTTGGATATTGGATCACAATATGGCAAACAGGATTTCGCTGATTTAGTCAAATCGCGCAAAGCGTTGTCATCTACAATTATGAGCCGAGAGTACGAAAGCCTAAAAAGTGAGGTGAGGTTCAAAATAAAAGGTCAACAGTT
droSec2 scaffold_100:38093-38256 + T-----CAATTGGCAGGCAATGGCTTCCACGAATATTGCCAAGCGCTTTTGGATATTGGATCACAGTATGGCAAACAGGATTTCGCTGACTTAGTCACATCGCGCAAAGCGTTGTCATCTACAATTATGAGCCGAGAGTACGAAAGCATAAAAAGTGAGGTGCGGTCCA-------------------
droYak3 v2_chrUn_5709:53125-53307 + T-----CAATTGGCAGGCAATGGCGTTCGCGACTATTGCCAAGAGCTTTTGGATATTGGATCAGTGTATGGCAAACAGGACTTCGCTGATTTAGTCACATCGCGCAAAACGTTGTCATCTACAATTATGAGCCGAGAGTATGAAAGCCTAAAAAGTGAAGTGCGGTCCAAAATAAAAGGTCAACAGTT
droEug1 scf7180000409885:6926-7104 - T-----GAATTGGTGGGTAGCGGCTTCCGTATATATTGCAAAACGCTTCTCAACATAGGAACAGAATTTGGAAGTCAGTCTTTAGATGATTTGGTTATATCCTGTAAAGTGTTAAGC----ATATCATGGAGAAAGAGTACGAAACGTTGAAGACTCAACTTATCATAAATTTGAAAGACCAAAAACC
droBia1 scf7180000300213:14-196 + T-----GAATTGGTAGGTAGCGGCTTCCGTGAATATAGCCAAGCGGTTCTCAACATAGGAGCAGAATTTGGAAGGCAATCTTTTGATGATTTGGTCATATCCCGTAAAGTGTTAAGCGCTACCATCATGGAAAAGGAGTACGAAACGTTGAAGACTCAACTTATTATAAGTTTGAAAGATCAACAACT
droKik1 scf7180000302136:18500-18687 + TTTTGTGAATTGGTAGGTAGCGGCTTCCGTGAATATAGCCAAGCGCTTCTCGACATAGGAGCAGAATTTGGAAGTCAGTCTATTAATGATTTGGTTATATCCCGTAAAGTGTTAAGCACTACCATTATGGAGAAAGAGTACGAATCTTTGAAAATTCAACTTATCTCAAGTTTGAAAGACCAAGAACT
droAna3 scaffold_13337:21615837-21616007 + A--------CTTGTAGGTGAAGGATTCCAAGAATACGTCCAAGAGGTCATCAATGTTGTTTCTACCTATGGCAAACAAAATTTTAAGGACTTGGTAGTGTCGAGGAGAACTTTAACCCGAGATATTATGGTGACGGAGTATACCAGAATCAAGTCGGAGCTACA---------AAAAACTCTACATTT
droBip1 scf7180000396712:2853827-2854009 - T-----GAATTGGTAGGTAGTGGCTTCCGTGAATATAGCCAAGCGCTTCTCAACATAGGAGCAGAATTTGGAAGGCAATCTTTTGATGATTTGGTCATATCCCGTAAGGTGTTAAGCACTACCATCATGGAAAAGGAGTACGAAACGTTGAAGACGCAACTTATTATAAGTTTGAAAGATCAACAACT
droWil2 scf2_1100000004949:711397-711579 + T-----ATATTGAAAGGCAATGGTTTTCGCGAATTTGCACAGCAGCTAATCAATACGGGCGCAGAATTTGGTAAACAAGACGTGGAAGACCTGATTGTATTCAGGAGAACACGCACAAGGGACGTTTTAGAGCAGCAATATATAGAAACAAAAACTAAGCTGTTGGAGTCCCTGGAAAATGAAGAACT
droMoj3 scaffold_6501:521054-521236 - T-----AAATTTATAGGAACTGGTTTTCGTAATTATGTTCAAGCTATATTGAACATAGGCGCACAGTACGGAACGCGCGACTCCCATGATCTGATTCTGTCCCGAAAAAAGTTAACAGGAAATGTTATGGTTGCAGAATACAATAGAATAAAGGATCTGCTCACTACTAACTTGTCAAACAAACACAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
T-----CAATTGGCAGGCAATGGCTTTCGCGAGTATTGAAAAGCGCTTTTGGATATTGGATCACAATATGGCAAACAGGATTTCGCTGATTTAGTCAAATCGCGCAAAGCGTTGTCATCTACAATTATGAGCCGAGAGTACGAAAGCCTAAAAAGTGAGGTGAGGTTCAAAATAAAAGGTCAACAGTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................TGTCATCTACAATTATGAGCCGAGA...................................................254244.7597900000011573333611000000
..................................................................................................................TCATCTACAATTATGAGCCGAGAGTA................................................264117.0046800060093122861574000000
..................................................................................................................TCATCTACAATTATGAGCCGAGA...................................................234107.00428000060101143541204000000
..................................................................................................................TCATCTACAATTATGAGCCGAGAG..................................................24455.00220000430255044895000000
..........TGGCAGGCAATGGCTTTCGCGAGTA.........................................................................................................................................................25233.006600000001812360000000
..................................................................................................................TCATCTACAATTATGAGCCGAGAGT.................................................25431.50126001100315517192000000
.......................................................TTGGATCACAATATGGCAAACAGGAT...........................................................................................................26217.5035000000234701000000
................................................................................................................TGTCATCTACAATTATGAGCCGAGAGTA................................................28413.50540000000245250000000
................................................................................................................TGTCATCTACAATTATGAGCCGAG....................................................24412.00480000000210270000000
.......................................................TTGGATCACAATATGGCAAACAGG.............................................................................................................24211.5023000000110633000000
................................................................................................................TGTCATCTACAATTATGAGCCGA.....................................................23411.00440000000123290000000
................................................................................................................TGTCATCTACAATTATGAGCCGAGAG..................................................2648.7535000000184220000000
................................................................................................................TGTCATCTACAATTATGAGCCGAGAGT.................................................2748.25330000000152160000000
..................................................................................................................TCATCTACAATTATGAGCCGAGAGTACGAA............................................3036.672000000088400000000
..................................................................................................................TCATCTACAATTATGAGCCGAG....................................................2245.502200003312390100000
..........TGGCAGGCAATGGCTTTCGCGAGT..........................................................................................................................................................2425.501100000004250000000
.......................................................TTGGATCACAATATGGCAAACAGGA............................................................................................................2525.501100010062101000000
..................................................................................................................TCATCTACAATTATGAGCCGAGAGTACGA.............................................2934.331300000074200000000
.................................................................................................................GTCATCTACAATTATGAGCCGAGAGTA................................................2743.5014000100003100000000
..................................................................................................................TCATCTACAATTATGAGCCG......................................................2043.501400009300002000000
................................................................................................................................................AGCCTAAAAAGTGAGGTGAGGTTCAAAA................2823.00600000021120000000
..................................................................................................................TCATCTACAATTATGAGC........................................................1842.25900009000000000000
..................................................................................................................TCATCTACAATTATGAGCCGA.....................................................2142.25900006000012000000
...........GGCAGGCAATGGCTTTCGCGAGTA.........................................................................................................................................................2422.00400000003010000000
..........TGGCAGGCAATGGCTTTCGCGAGTAT........................................................................................................................................................2622.00400000011020000000
.................................................................................................................................................GCCTAAAAAGTGAGGTGAGGTTCAAAA................2722.00400000021010000000
..........TGGCAGGCAATGGCTTTCGCGAG...........................................................................................................................................................2322.00400000002020000000
...............................................................................................................TTGTCATCTACAATTATGAGCCGAGA...................................................2641.75700000023200000000
...............................................................................................................................................AAGCCTAAAAAGTGAGGTGAGGTTCAAAA................2921.50300000002100000000
................................................................................................................TGTCATCTACAATTATGAGCCGAGAGA.................................................2741.50600000006000000000
..................................................................................................................TCATCTACAATTATGAGCCGAGAGA.................................................2541.50600000013110000000
..........................................................................................................AAGCGTTGTCATCTACAATTATGAGC........................................................2641.25500000001103000000
..........TGGCAGGCAATGGCTTTCGCGA............................................................................................................................................................2221.00200000000020000000
............................................................................................................................................CGAAAGCCTAAAAAGTGAGGTGAGGT......................2621.00200000011000000000
...........................................................................................................AGCGTTGTCATCTACAATTATGAGCCGA.....................................................2841.00400000000031000000
..................................................................................................................TCATCTACAATTATGA..........................................................1641.00400000001030000000
.............CAGGCAATGGCTTTCGCGAGT..........................................................................................................................................................2121.00200000011000000000
.......................................................TTGGATCACAATATGGCAAACAG..............................................................................................................2321.00200000010010000000
.................................................................................................................................................GCCTAAAAAGTGAGGTGAGGTTCAA..................2521.00200000000200000000
..................................................................................................................TCATCTACAATTATGAGCCGAGAGTT................................................2641.00400000002200000000
.......................................................TTGGATCACAATATGGCA...................................................................................................................1821.00200001000001000000
.................................................................................................................GTCATCTACAATTATGAGCCGAGA...................................................2440.75300000002100000000
..............................................................................................................GTTGTCATCTACAATTATGAGCCGAGA...................................................2740.75300000000120000000
..................................................................TATGGCAAACAGGATTTCGCTGAT..................................................................................................2440.75300000000201000000
..................................................................................................................TCATCTACAATTATGAGCC.......................................................1940.75300003000000000000
................................................................................................................TGTCATCTACAATTATGAGCCGAGT...................................................2540.75300000003000000000
..................................................................................................................TCATCTACAATTATGAGCCGAGAGTAA...............................................2740.75300000010020000000
.................................................................................TTCGCTGATTTAGTCAAAT........................................................................................1930.67200000000002000000
....................................TGAAAAGCGCTTTTGGAT......................................................................................................................................1820.50100000000100000000
........................................................TGGATCACAATATGGCAAACAGGATTT.........................................................................................................2720.50100000000000010000
..................................................................................................................TCATCTACAATTATGAGCCGAA....................................................2240.50200000000020000000
.......................................................TTGGATCACAATATGGC....................................................................................................................1720.50100000000001000000
.........................................................................................................AAAGCGTTGTCATCTACAATTATGAGC........................................................2740.50200000000002000000
....................................................................................................................................................TAAAAAGTGAGGTGAGGTTCAAAA................2420.50100000010000000000
....................................................................TGGCAAACAGGATTTCGCTGATTTAGT.............................................................................................2740.50200000000002000000
...................................TTGAAAAGCGCTTTTGGATATTGGA................................................................................................................................2520.50100000000001000000
....................................................................................................................ATCTACAATTATGAGCCGAGAGTA................................................2440.50200000000011000000
..........................................................................................................................................TACGAAAGCCTAAAAAGTGAGGTGAGG.......................2720.50100000000001000000
............................................................................................................................................CGAAAGCCTAAAAAGTGAGGT...........................2120.50100000000010000000
...........................................................................................................................................................TGAGGTGAGGTTCAAAATAAAAG..........2320.50100000010000000000
.....................................................................................................................TCTACAATTATGAGCCGAGA...................................................2040.50200000001100000000
.............................................................................................................CGTTGTCATCTACAATTATGAGCCGAGA...................................................2840.50200000010010000000
..........TGGCAGGCAATGGCTTTCGCGAGTATT.......................................................................................................................................................2720.50100000000010000000
..................................................................................................................TCATCTACAATTATGAGCCGAGAGG.................................................2540.50200000000200000000
...........................CGCGAGTATTGAAAAGCGCTTTTGGATA.....................................................................................................................................2820.50100000010000000000
....................................................................................................................................................TAAAAAGTGAGGTGAG........................1620.50100000000001000000
.....................................................................................................................TCTACAATTATGAGCCGAGAGTA................................................2340.50200000001001000000
............................................................TCACAATATGGCAAACAGGATTTCGC......................................................................................................2620.50100000000000010000
.........................................................................................................AAAGCGTTGTCATCTACAATTATGA..........................................................2540.50200000000011000000
..........................................................................................................................................TACGAAAGCCTAAAAAGTGAGGTGA.........................2520.50100000000010000000
.................................TATTGAAAAGCGCTTTTGGATATTGG.................................................................................................................................2620.50100000000000010000
..............................................................................................................GTTGTCATCTACAATTATGAGCCGA.....................................................2540.50200000001100000000
...........GGCAGGCAATGGCTTTCGCGAGTAT........................................................................................................................................................2520.50100000000010000000
..........TGGCAGGCAATGGCT...................................................................................................................................................................1540.50200000000002000000
T-----CAATTGGCAGGCAATGGCTTTCGC..............................................................................................................................................................2520.50100000000001000000
.......................................................................................................................TACAATTATGAGCCGAGA...................................................1840.50200000001001000000
....................................................................................................CGCGCAAAGCGTTGTCATCTACAATT..............................................................2640.50200000000110000000
...........................................................................................................AGCGTTGTCATCTACAATTATGAGCC.......................................................2640.50200000000002000000
..........................................................................................TTAGTCAAATCGCGCAAAGCGTTG..........................................................................2430.33100010000000000000
.................................................................................TTCGCTGATTTAGTCAAATCGCGCA..................................................................................2530.33100000000010000000
.................................................................................TTCGCTGATTTAGTCAAATCG......................................................................................2130.33100000000001000000
................................................................................TTTCGCTGATTTAGTCAAATCGCGCAAAGA..............................................................................3030.33100000010000000000
...................ATGGCTTTCGCGAGTA.........................................................................................................................................................1630.33100000001000000000
.......................................................TTGGATCACAATATGGCAAACAGGAA...........................................................................................................2630.33100000000001000000
..................................................................................................................TCATCTACAATTATGAGCCGAGAT..................................................2440.25100000000010000000
...............................................................................................................TTGTCATCTACAATTATGAGCCGAGAG..................................................2740.25100000000100000000
......................................................................................................................CTACAATTATGAGCCGA.....................................................1740.25100000001000000000
...................................................................................................................CATCTACAATTATGAGCCGAGAGTA................................................2540.25100000010000000000
.................................................................................................................GTCATCTACAATTATGAGCCGAGAG..................................................2540.25100000000010000000
.......................................................................................................................TACAATTATGAGCCGAG....................................................1740.25100000000001000000
....................................................................TGGCAAACAGGATTTCGCTGA...................................................................................................2140.25100000000100000000
..................................................................................................................TCATCTACAATTATGAGCCGAGAGTAAA..............................................2840.25100000000010000000
..........................................................................................................AAGCGTTGTCATCTACAATTATGAG.........................................................2540.25100000000001000000
......................................................................................................................CTACAATTATGAGCCGAGA...................................................1940.25100000000100000000
................................................................................................................TGTCATCTACAATTATGAGCCGAGAA..................................................2640.25100000001000000000
.......................................................................................................................TACAATTATGAGCCGAGAG..................................................1940.25100000000001000000
.....................................................................GGCAAACAGGATTTCGCTGAT..................................................................................................2140.25100000000001000000
................................................................................................................TGTCATCTACAATTATGAGCCGAGTT..................................................2640.25100000001000000000
....................................................................................................................ATCTACAATTATGAGCCGAGAG..................................................2240.25100000000001000000
..................................................................................................................TCATCTACAATTATGAGCCGAGAGTG................................................2640.25100000000010000000
...........................................................................................................AGCGTTGTCATCTACAATT..............................................................1940.25100000000001000000
................................................................................................................TGTCATCTACAATTATGAGCCGAGAT..................................................2640.25100000001000000000
..............................................................................................................GTTGTCATCTACAATTATGAGCCGAG....................................................2640.25100000000010000000
.................................................................................................................GTCATCTACAATTATGAGCCGAGAGTT................................................2740.25100000000010000000
...........................................................................................................AGCGTTGTCATCTACAATTATGAGCCG......................................................2740.25100000000001000000
.........................................................................................................AAAGCGTTGTCATCTACAATT..............................................................2140.25100000000010000000
..................................................................................................ATCGCGCAAAGCGTT...........................................................................1540.25100000000001000000
..................................................................TATGGCAAACAGGATTTCGCTGAA..................................................................................................2440.25100000000001000000
..............................................................................................................GTTGTCATCTACAATTATGAGC........................................................2240.25100000000001000000
................................................................................................................TGTCATCTACAATTATGAGCCGAGAGAC................................................2840.25100000010000000000
.....................................................................................................................TCTACAATTATGAGCCGAGAG..................................................2140.25100000000001000000
.........................................................................................................................CAATTATGAGCCGAGAG..................................................1740.25100000000100000000
......................................................................................................................CTACAATTATGAGCCGAGAG..................................................2040.25100000000001000000
................................................................................................................TGTCATCTACAATTATGA..........................................................1840.25100000000010000000
..................................................................TATGGCAAACAGGAT...........................................................................................................1540.25100000000001000000
..........................................................................................................AAGCGTTGTCATCTACAATTATGA..........................................................2440.25100000000001000000
.........................................................................................................................CAATTATGAGCCGAGA...................................................1640.25100000001000000000
....................................................................TGGCAAACAGGATTTCGCTGAT..................................................................................................2240.25100000000001000000
..........................................................................................................AAGCGTTGTCATCTACAATTATGAGCGTT.....................................................2940.25100000000001000000
..............................................................................................................GTTGTCATCTACAATTATGAGCCGAGAGA.................................................2940.25100000001000000000
...................................................................ATGGCAAACAGGATTTCGCTGAT..................................................................................................2340.25100000000001000000
................................................................................................................TGTCATCTACAATTATGAGCCGAGAGTT................................................2840.25100000001000000000
..........................................................................................................................AATTATGAGCCGAGA...................................................1550.20100000000001000000
........................................AAGCGCTTTTGGATATTGGA................................................................................................................................2050.20100000000001000000
...........................................................................................................................ATTATGAGCCGAGAG..................................................1550.20100000000001000000
........................................AAGCGCTTTTGGATA.....................................................................................................................................1550.20100000010000000000
.............................................................................................................................TATGAGCCGAGAGTA................................................1550.20100000000001000000
.................................................................................TTCGCTGATTTAGTCA...........................................................................................1650.20100000000001000000
........................................AAGCGCTTTTGGATATTGGAT...............................................................................................................................2150.20100000000010000000
droSec2
T-----CAATTGGCAGGCAATGGCTTCCACGAATATTGCCAAGCGCTTTTGGATATTGGATCACAGTATGGCAAACAGGATTTCGCTGACTTAGTCACATCGCGCAAAGCGTTGTCATCTACAATTATGAGCCGAGAGTACGAAAGCATAAAAAGTGAGGTGCGGTCCA-------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................CGCTTTTGGATATTGGATCACAGTAT.......................................................................................................................2620.5010010
droYak3
T-----CAATTGGCAGGCAATGGCGTTCGCGACTATTGCCAAGAGCTTTTGGATATTGGATCAGTGTATGGCAAACAGGACTTCGCTGATTTAGTCACATCGCGCAAAACGTTGTCATCTACAATTATGAGCCGAGAGTATGAAAGCCTAAAAAGTGAAGTGCGGTCCAAAATAAAAGGTCAACAGTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................TTGGATATTGGATCAGTGTATGGCA...................................................................................................................2511.00100000010000
.............................................CTTTTGGATATTGGATCAGTGTATGGC....................................................................................................................2711.00100000010000
............................................GCTTTTGGATATTGGATCAGTGTATGGC....................................................................................................................2811.00100000010000
.........................................................................................................................CAATTATGAGCCGAGAGTATGAA............................................2311.00100000010000
droEug1
T-----GAATTGGTGGGTAGCGGCTTCCGTATATATTGCAAAACGCTTCTCAACATAGGAACAGAATTTGGAAGTCAGTCTTTAGATGATTTGGTTATATCCTGTAAAGTGTTAAGC----ATATCATGGAGAAAGAGTACGAAACGTTGAAGACTCAACTTATCATAAATTTGAAAGACCAAAAACCSizeHit CountTotal NormTotal
No Reads
droBia1
T-----GAATTGGTAGGTAGCGGCTTCCGTGAATATAGCCAAGCGGTTCTCAACATAGGAGCAGAATTTGGAAGGCAATCTTTTGATGATTTGGTCATATCCCGTAAAGTGTTAAGCGCTACCATCATGGAAAAGGAGTACGAAACGTTGAAGACTCAACTTATTATAAGTTTGAAAGATCAACAACTSizeHit CountTotal NormTotal
No Reads
droKik1
TTTTGTGAATTGGTAGGTAGCGGCTTCCGTGAATATAGCCAAGCGCTTCTCGACATAGGAGCAGAATTTGGAAGTCAGTCTATTAATGATTTGGTTATATCCCGTAAAGTGTTAAGCACTACCATTATGGAGAAAGAGTACGAATCTTTGAAAATTCAACTTATCTCAAGTTTGAAAGACCAAGAACTSizeHit CountTotal NormTotal
No Reads
droAna3
A--------CTTGTAGGTGAAGGATTCCAAGAATACGTCCAAGAGGTCATCAATGTTGTTTCTACCTATGGCAAACAAAATTTTAAGGACTTGGTAGTGTCGAGGAGAACTTTAACCCGAGATATTATGGTGACGGAGTATACCAGAATCAAGTCGGAGCTACA---------AAAAACTCTACATTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................TATACCAGAATCAAGTCGGAGCTAC.........................2520.501010000
..........................................................................................................................................TATACCAGAATCAAGTCGGAGCTACA---------AAA............2920.501100000
.............................................................................................................................................ACCAGAATCAAGTCGGAGCTACA---------AAAA...........2720.501000010
............................................................................................................................................TACCAGAATCAAGTCGGAGCT...........................2120.501010000
..........................................................................................................................................TATACCAGAATCAAGTCGGAGCTACA---------...............2620.501100000
.............................................................................................................................................ACCAGAATCAAGTCGGAGCTAC.........................2220.501010000
.............................................................................................................................................ACCAGAATCAAGTCGGAGCTACA---------AA.............2520.501000010
.............................................................................................................................................ACCAGAATCAAGTCGGAGCTACA---------...............2320.501100000
......................................................................................GGACTTGGTAGTGTCGAGGAGA................................................................................2230.331100000
.................................................................................................TGTCGAGGAGAACTTTAACCCGAGATA................................................................2730.331100000
......................................................................................GGACTTGGTAGTGTCGAGGAGAAC..............................................................................2430.331100000
..........TTGTAGGTGAAGGATTCCAAGAATACGT......................................................................................................................................................2840.251010000
.........................TCCAAGAATACGTCCAAGAGGTCATCAA.......................................................................................................................................2840.251100000
.....................................TCCAAGAGGTCATCAATGTTGTTTCTACC..........................................................................................................................2940.251010000
.............TAGGTGAAGGATTCCAAGAATACGTC.....................................................................................................................................................2640.251000010
......................GATTCCAAGAATACGTCCAAGAGGTC............................................................................................................................................2640.251000010
................................................................................................................TAACCCGAGATATTATGGTGACGG....................................................2450.201100000
.....................................................................................................................CGAGATATTATGGTGACGGAGTATA..............................................2550.201000010
..................................................................................TTAAGGACTTGGTAGTGTCG......................................................................................2050.201100000
.................................................................................................................AACCCGAGATATTATGGTGACGGAG..................................................2550.201100000
................................................................................................................TAACCCGAGATATTATGGTGACGGAG..................................................2650.201010000
................................................................................TTTTAAGGACTTGGTAGTGTCGA.....................................................................................2350.201000010
..................................................................................TTAAGGACTTGGTAGTGTCGA.....................................................................................2150.201000010
...................................................................ATGGCAAACAAAATTTTAAGGACTTGG..............................................................................................2760.171100000
droBip1
T-----GAATTGGTAGGTAGTGGCTTCCGTGAATATAGCCAAGCGCTTCTCAACATAGGAGCAGAATTTGGAAGGCAATCTTTTGATGATTTGGTCATATCCCGTAAGGTGTTAAGCACTACCATCATGGAAAAGGAGTACGAAACGTTGAAGACGCAACTTATTATAAGTTTGAAAGATCAACAACTSizeHit CountTotal NormTotal
No Reads
droWil2
T-----ATATTGAAAGGCAATGGTTTTCGCGAATTTGCACAGCAGCTAATCAATACGGGCGCAGAATTTGGTAAACAAGACGTGGAAGACCTGATTGTATTCAGGAGAACACGCACAAGGGACGTTTTAGAGCAGCAATATATAGAAACAAAAACTAAGCTGTTGGAGTCCCTGGAAAATGAAGAACTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................AAGACGTGGAAGACCTGATTGTATTCAG....................................................................................2811.00101000
...................................................................TTGGTAAACAAGACGTGGAAGACC.................................................................................................2490.56504010
.............................................CTAATCAATACGGGCGCAGAATT........................................................................................................................2390.44404000
...................................TGCACAGCAGCTAATCAATACGGGCG...............................................................................................................................2690.44401030
...................................................................TTGGTAAACAAGACGTGGAAGACCTG...............................................................................................2690.33303000
...................................TGCACAGCAGCTAATCAATACGGG.................................................................................................................................2490.33302010
.............................................CTAATCAATACGGGCGCAGAATTTGG.....................................................................................................................2690.33303000
..............................................TAATCAATACGGGCGCAGAATTTGG.....................................................................................................................2590.22201010
......................................................................GTAAACAAGACGTGGAAGACCTGA..............................................................................................2490.22200020
.............................................CTAATCAATACGGGCGCAGAATTTG......................................................................................................................2590.22202000
....................................................................TGGTAAACAAGACGTGGAAGACCTGA..............................................................................................2690.22202000
...............................................................GAATTTGGTAAACAAGACGTGGAAGA...................................................................................................2690.22200110
..................................................................................................................................AGCAGCAATATATAGAAACAAAAACT................................2670.14101000
....................TGGTTTTCGCGAATTTGCACAGCAGC..............................................................................................................................................2670.14100010
................................................................................................................................................................TGTTGGAGTCCCTGGAAAATGAAGAACT2870.14101000
............................................................................................................................................TATAGAAACAAAAACTAAGCTGTTGGAG....................2880.13101000
..........................................................................................................................................TATATAGAAACAAAAACTAAGCTGT.........................2580.13101000
.............................................................................................................................................ATAGAAACAAAAACTAAGCTGTTG.......................2480.13101000
...................................................................TTGGTAAACAAGACGTGGAAGACCTGA..............................................................................................2790.11101000
.................................................TCAATACGGGCGCAGAATTTGGTA...................................................................................................................2490.11101000
...................................................................TTGGTAAACAAGACGTGGAAGA...................................................................................................2290.11100100
..................................................................TTTGGTAAACAAGACGTGGAAGACC.................................................................................................2590.11101000
...................................................................................................................................................ACAAAAACTAAGCTGTTGGAGTCCC................2590.11101000
.............................................................................................................................................................AGCTGTTGGAGTCCCTGGAAAAT........2390.11101000
.................................................................ATTTGGTAAACAAGACGTGGAAG....................................................................................................2390.11101000
....................................................................TGGTAAACAAGACGTGGAAGA...................................................................................................2190.11101000
...........................................AGCTAATCAATACGGGCGCAG............................................................................................................................2190.11100010
...................................................................TTGGTAAACAAGACGTGGAAGAC..................................................................................................2390.11101000
..........................................CAGCTAATCAATACGGGCGCAGAATT........................................................................................................................2690.11101000
.........................TTCGCGAATTTGCACAGCAGCTAATCAA.......................................................................................................................................2890.11101000
.............................................................................................................................................................AGCTGTTGGAGTCCCTGGAAA..........2190.11101000
...................................................................TTGGTAAACAAGACGTGGAAGACCTGAT.............................................................................................2890.11101000
...................................................................................................................................................ACAAAAACTAAGCTGTTGGAGTCCCT...............2690.11101000
......................................ACAGCAGCTAATCAATACGGGC................................................................................................................................2290.11110000
..................................................CAATACGGGCGCAGAATTTG......................................................................................................................20100.10101000
.........................................................................................................................ACGTTTTAGAGCAGCAATATA..............................................21100.10100010
.........................................................................................................................................................ACTAAGCTGTTGGAGTCCCTG..............21100.10101000
.....................................................TACGGGCGCAGAATTTGGTAA..................................................................................................................21100.10100010
.............................................................................................................................TTTAGAGCAGCAATATATAG...........................................20100.10100010
......................................................................................................................................................AAAACTAAGCTGTTGGAG....................18110.09101000
droMoj3
T-----AAATTTATAGGAACTGGTTTTCGTAATTATGTTCAAGCTATATTGAACATAGGCGCACAGTACGGAACGCGCGACTCCCATGATCTGATTCTGTCCCGAAAAAAGTTAACAGGAAATGTTATGGTTGCAGAATACAATAGAATAAAGGATCTGCTCACTACTAACTTGTCAAACAAACACATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads

Generated: 05/15/2015 at 04:04 PM