ID:

dsi_3365

 Coordinate:

3r:19402532-19402681 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-40.8 -40.7 -40.7

Flybase annnotation

five_prime_UTR [3r_19402470_19402856_-]; exon [3r_19401852_19402856_-]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################################################################################
TCTAACACAATTTCCGGAAAATTGGGGGAACACATCCCATTATTTGGCGGTCGCCCGGTGTGGCAGCCCTGGTAGCAGCCCTGGTAGCTGGGTTGCGATATATCGACCTTGATACACCAACTGCCATCCCCATCACTCTGGGTTGTTTTTTTTTTGCGTTTTTGCATAACAAAATCATAGAATTTCGGCCTAAACGCCAGCGATCTCTGACCAGGAGAGCACGAGCACAGGAGCGGGACATCTCACTTGG
**************************************************..((((((.(((((((...((((.(((((((........)))))))....(((((....))))).)))).))))))).)).........))))((.((((.((.((((....)))).)).)))).)).........(((......)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 GSM343915
embryo
 M025
embryo
 M053
female body
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
..............................................................................................................................................................................TCATAGAATTTCGGCCTA.......................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AGTCCAACGATCTCTGACCA..................................... 20 3 7 1.14 8 6 0 0 0 0 0 0 0 2 0 0 0
...........................................................................................................................................................................................................TCTATGACCAGGAGAGCACGAGCACA..................... 26 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................AGGAGAGCACGAGCACAGGAGCGGG............. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TCTGACCAGGAGAGCACGAGCACAGG................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................AAACGCCAGCGATCTCTGA........................................ 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TAAACGCCAGCGATCTCTGACCAGGA.................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................GCCAGCGATCTCTGACCAGGAG................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................TAAACGCCAGCGATCTCTGACCAGG................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................AGGAGCGGGACATCTCACTT.. 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................ATCATAGAATTTCGGCCTA.......................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................TGGCGGTCGCCCGGCGTGGCAT........................................................................................................................................................................................ 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................................................................................................................................GCGATCTCTGACCAGGAGAG............................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AACATCATAGGATTTCGG.............................................................. 18 2 3 1.00 3 0 0 0 0 3 0 0 0 0 0 0 0
..............................................................................................................................................................................................TAAACGCCAGCGATCTCTGACCAGGAG................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TCTGACCAGGAGAGCACGAGCACAG.................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................GCCTAAACGCCAGCGATCTCTGACCA..................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AACTCTGACCAGGAGAGC.............................. 18 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................AATCATAGAATTTCGGCCTAAACGCCAGC................................................. 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
........................................TATTTGGCTGTCGCCCTGCGTG............................................................................................................................................................................................ 22 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................AGCGATCTCTGTCCATGACA................................ 20 3 4 0.75 3 0 3 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................ATAACATCATAGGATTTCGG.............................................................. 20 3 11 0.64 7 0 0 0 0 7 0 0 0 0 0 0 0
.................................................................................................................................................................................................AGTCCAACGATCTCTGACC...................................... 19 3 16 0.56 9 8 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................................................GTCCAACGATCTCTGACCA..................................... 19 3 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................ATCATAGGATTTCGG.............................................................. 15 1 10 0.30 3 0 0 0 0 1 0 0 0 0 0 0 2
...........................................................................................................................................................................ACATCATAGGATTTCGG.............................................................. 17 2 15 0.27 4 0 0 0 0 2 0 0 0 0 0 0 2
................................................................................................................................................................................................................................GTACAGGGGCGGTACATCTC...... 20 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................TTGGGGGGACACACCCCA................................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................GTCCAACGATCTCTGACC...................................... 18 3 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
............................................TGGCGGTCAACAGGTGTGGC.......................................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AGCCCAACGATCTCTGACCA..................................... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................CAACTATCTCTGACCAG.................................... 17 2 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TTTTTTTTTGTTGCGTTCTTGCA.................................................................................... 23 3 14 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................ATCATAAAAGCTCGGCCTA.......................................................... 19 3 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................TTGTTTTTCTTTTGCGT........................................................................................... 17 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

AGATTGTGTTAAAGGCCTTTTAACCCCCTTGTGTAGGGTAATAAACCGCCAGCGGGCCACACCGTCGGGACCATCGTCGGGACCATCGACCCAACGCTATATAGCTGGAACTATGTGGTTGACGGTAGGGGTAGTGAGACCCAACAAAAAAAAAACGCAAAAACGTATTGTTTTAGTATCTTAAAGCCGGATTTGCGGTCGCTAGAGACTGGTCCTCTCGTGCTCGTGTCCTCGCCCTGTAGAGTGAACC
**************************************************..((((((.(((((((...((((.(((((((........)))))))....(((((....))))).)))).))))))).)).........))))((.((((.((.((((....)))).)).)))).)).........(((......)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
.....................................................................................................................................................................................................................................CCTCGCCCTGTAGAGT..... 16 0 1 1.00 1 0 1 0 0
.............................................................................................................................................................................................GATTTGCGGTCGCTAGAGACT........................................ 21 0 1 1.00 1 1 0 0 0
.......................................................................................................GCTGGAACTATGTGGTTGAC............................................................................................................................... 20 0 1 1.00 1 1 0 0 0
......................................................................................................................................................................................................TCGCTAGAGACAGGTACT.................................. 18 2 4 0.25 1 0 0 1 0
...................................................................................................................................................................................................................................GTCCTGGCCCCGGAGAGTG.... 19 3 6 0.17 1 0 1 0 0
......................................................................................................................................................................................................TCGCTAGAGACAGGT..................................... 15 1 10 0.10 1 0 0 1 0
..................................................................................................................................................AAAAAAAAACGCAGAAAGGT.................................................................................... 20 2 20 0.10 2 0 0 0 2
.......................................................................................................................................................................................................CGCTAGAGACAGGTACTGT................................ 19 3 12 0.08 1 0 0 1 0
......................................................................................................................................................................................................................................CTCGCCCTGGGGAGTG.... 16 2 12 0.08 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:19402482-19402731 - dsi_3365 TCTAACACAATTTCCGG---AAAA-TTGGGGGAACAC-------------------ATCCCA-TTATTT--GGCGGTCGCCCG-GTGTGGCAGCCCTGGTAGCAGCCCTGGTAGCTGGGTT-GCGAT-------AT------ATCG--------ACCTTGATACACCAACTGCCATCCCCATCAC--TCTGGGTTGTTTTTTTTTTGC-GTTTTTGCATAACAAAATCATA-GAATTTCGGC--------------------CTAAA-CGCCAGCGA--------TCTCTGACCAGGAGAGCACGAGC-----------------A----CAGGA-----GCGGGACA-TCTCACTTGG-------------
droSec2 scaffold_0:20204810-20205047 - TCTAACACAATTTCCGG---AAAA-TTGGGGGAACAC-------------------ATCCCA-TTATTT--GGCGCTCGCCCG-GTGTGGCAGCCCTG------------GTAGCTGGGTT-GCGAT-------AT------ATCG--------ACCTTGATACACCAACTGCCATCCCCATCAC--TCTGGGTTGTTTTTTTTTTGC-GTTTTTGCATAACAAAATCATA-GAATTTCGGC--------------------CCAAA-CGCCAGCGA--------TCTCTGACCAGGAGAGCACGAGC-----------------A----CAGGA-----GCGGGACA-TCTCACTTGG-------------
dm3 chr3R:19863283-19863519 - TCAAACACAATTGCCGG---AAAA-TTGGGGAAAAAT-------------------ATCGCA-TTATTT--GGCGGTCGCCTA-GTGTGGCAGCCCTG------------GTAGCTGGGTT-GCGAT-------AT------ATCG--------ACCTTGATACACCTACTGCCATCCCCATCAC--TCTGGGTTGTTTT-TTTTTGC-GTTTTTGCATAACAAAATCCTA-GAATTTCGGC--------------------CTAAA-CGCCAGCGA--------TCTCTGACCAGCAGAGCACGAGC-----------------A----CAGGA-----GCGGCATA-TCTCACTTGG-------------
droEre2 scaffold_4820:8193629-8193868 + TTAAACACAATTGCCAG---AAAA-TTGGGAAAAATC-------------------ATCGCT-TTGTTT--TGCGGTCGCCCA-GTGTGGCAGCCCTG------------GCAGCTGGGTT-GCGAT-------AT------ATCG--------ACCTTGATACACCAACTGCCATCCCCATCACTCTCTGAGTTGTTTTTTTTTTGC-GTCTTTGCATAACAAAATCTTA-GAATTTCGGC--------------------CAAAA-CGCCAGCGA--------TCTCTGACCAGAAGATCACGAGA-----------------A----CAGGA-----GCGGCACA-ACTCATTTGG-------------
droYak3 3R:26637995-26638234 + TTAAACACAATTGCCGA---AAAAATAGGGGAAGAAC-------------------ATCGCA-TTGTTT--TGCGGTCGCCCG-GTGTGGCAGCCCTG------------GCAGCTGGGTT-GCGAT-------AT------ATCG--------ACCTTGGTACACCAACTGCCATCCCCATCACTCTCTGGGTTGTTTT--TTTTGC-GTTTTTGCATAACAAAATCTGG-GAATTTCGGC--------------------TAAAAGCGCCAGCGA--------TCTCTGTCCAGGAGAGCACGAGA-----------------A----CAGGA-----GCGGCACA-TCTCACTTGG-------------
droEug1 scf7180000409798:529257-529500 + TTAAGCCCAATTGTCA---------TTGGACAAAAAC-------------------ATCGTT-GTGCTT--TACAGTGGCCCG-GTGTGGCAGCCCTG------------GCAGTTGGGTT-GTGATATA-GGTAT------ATCGATAGCCCAACCTTGATACATCAACTGCCATCC-CATCTC--ACTCGGTTGTTTT--TTTTGC-GTTTTTGCATAACAAAATCTTG-GAAATTCGCC--------------------CAAAA-GACAGGCGT--------TTGCGAACCCGGAGACCAGAAGA-----------------C----CAGGA-----GCGGCATA-TCCCACTTCC-------------
droBia1 scf7180000302136:208414-208646 - TTAAAC-CAAACGACGG---CGTT-TTAGGGTTAAAC-------------------ATAGCT-GAGCTT--G--------CCG-GTGTGGCAGCCCTG------------GCAGCCGGG-T-GCGATAGC-GGAGT------ATCGATAGCGCAACCTTGATACATCGACTGCCATCC-CATCTCTCTCTCGGTTGTTTT--TTTTGC-GTTTTTGCATAACAAAATCTTG-GAAATTCGCC--------------------CAAAA-CGCAGGCGA--------TTGCGGACTCGGAG--------A-----------------C----CAGGA-----GCGGCACA-TCCCACTTGC-------------
droTak1 scf7180000414373:191854-192070 + TTAAACCGAATTGTCGG---TGGAATTGGAGA-AACT-------------------ATCGCT-GTGCTT--GGG--------G-GTGTGGCAGCCCTG------------GCAGCCGGG-T-GCGATATC-GGTAC------ATCGATAGCGCAACCTTGATACATCGACTGCCATCCTC-------GTTCGGTTGTTT---TTTTGC-GTTTTTGCATAACAAAATCTTG-GAAATTCGCC--------------------CCAAAACACAGGCCA--------TC-------------------GA-----------------C----CAGGA-----GCGGCACA-TCCCACTTGC-------------
droEle1 scf7180000491008:163898-164149 - TTGAACACATTTTTTGGTGAAAAC-TTTG--AAAAGC-------------------ATTGCT-GTTTTTGTTACAGTGACCCA-GTGTGGCAGCCCTG------------GTAGCTGGGCT-GTGGGAGC-GATAT------ATCGGTATCGCAATC-TGGCACACCAACTGCCATCC-CATCTCTTTCTCGGTTGTTT---TTTTGC-GTTTTTGCATAACAAAATCTAA-AAAATTCGCC--------------------CAAAA-CGCAAGCAA--------TAGCGGATACGGAGACCAGGAGA-----------------C----CAGCA-----GCGGCACA-ACCCCATTGC-------------
droRho1 scf7180000779169:31016-31259 + TTAAATACAATTTTTGGTGGAAAT-TTTACAAAAAAA-------------------AACTA--------------ACTGCCCA-GTGTGGTAGCTCTG------------GCAGCTGGGTTTGCGATAGC-GATAC------ATCGTTAACGCAATC-TGGTACACTAACTGCTATCC-CATCTCTCTCTCGGTTGTTTT--TTTTGC-GTTTTTGCATAACAAAATCTAAAAAAATTCGCC--------------------CAAAA-CGCAAGCGA--------TCAGGGACACGGAGATTAGGAGA-----------------C----CAAGT-----GCGGCACA-TCGCCCTTGC-------------
droFic1 scf7180000453800:2046295-2046548 - TTAAACTCGACCGCCGGTGA-TTA-TTTTCAAAATAA-------------------TTCGCTATTTTTT--GGCGGTGGCCTACGCGTGGCAGCCCTG------------GC-GCTGTGCT-GCGATAGC-GATAC------ATCGATAACGCAACCTTGATACACTAACTGCCATCCC-AACTCACTCTTGGTTGTTTT--TTTTGC-GTTTTTGCATAACAAAATCTTG-GAAATTCGCC--------------------CAAAA-CGCAGGCGA--------TTGCGGAAACGGAGTTCAGGAGA-----------------C----CAGGA-----GAGGCACA-TCCCACCTTC-------------
droKik1 scf7180000302778:262326-262582 - GCTGTTTAAATTTTCTG---AAGT-T-------ATTAATTGTTGATTTTGTTGGACA-----------T--TGCTACCG-CTG-GTCTGGCAGCCCCA------------T--CTTGGGTT-GCGATAACCGTTACCCGATAGCCGATAGCACAACCTTGATACATCAGCTGCCATCCCCATCTCTCTCTTGGTTGTTT---TTTTGC-GTTTTTGCATAACAAAATCTCG-GATACTTGCC--------------------CGAAA-CGAGCACCA--------TTGCGGATACAGTGACCAGGAGA-----------------C----CACGA-----GAGGCACA-TCCCACTCGC-------------
droAna3 scaffold_13340:7692226-7692332 + CC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCCATCC----------CTCGGTTGTTT---TTTTGC-GTTTTTGCATAACAAAATATCG-AAAACTCGCC--------------------CGAAT-CGA------------------------------------A-----------------C----CAGGA-----GAGGCACA-ACCCAGTTGCTGGAGGCAGTTGG
droBip1 scf7180000396708:1151502-1151605 - CC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCCATCC----------CTCGGTTGTTT---TTTTGC-GTTTTTGCATAACAAAATCTAG-GAAACTCGCC--------------------CGAAT-CGA------------------------------------A-----------------C----AAGGA-----GAGACACA-ACCCAGTTGCTGGAGGCAG---G
dp5 2:14383801-14383917 - TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCC-ATTTTTGCATAACAAAATCAAA-GAAATTAAGTCATTTAATTTAAATTTAATTT-AAA-AGTAAGCAT-------------------------AAGAAG--CGGGGAACGACCAGGC----TAAGGCAAGCGCAGC----ACACACATTG-------------
droWil2 scf2_1100000004943:10861376-10861378 - TAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13047:18608883-18608997 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTTGCATAACAAAATCTTT-TAAAATTACC-------------------GTACAACCACAAGCGA--------AAGT-AATCAAAATTACAAAAAA--GAATAAACGGTTACATAAAGCG--ATAAG--CGTTGTGTACTTACAAAG-------------
droMoj3 scaffold_6540:7154536-7154696 - CGATACGC----------------------------------------------------------------------------------------------------------------------------------------GT--------GTCTTTATAAATCAGCTGCCGTCTC------------GGTTGTA-----TCTGCGGTTTTTGCATAACAAAATCTTT-AA-ATTATCC--------------------TAAAACCACAAGAAAGAGAGGGAGAGT-AACCAAAATT-GACGAAAACGAA--A------ACGTAAAGCGATA-----ACGTAGTGTACTTACGTAT-------------
droGri2 scaffold_14906:4640097-4640251 + GTT--------------------------------------------------------------------------------------------------------------GTAGAGTA-TCGAT-------AC------GCTT--------GTCTAAATAAATCAGCTGCCGTTTC------------GGCTGTA-----TCTGCGGTCTTTGCATAACAAAATTCATCAAAATTCACT-------------------GCAAATCCGCCAGAGA--------AATT-CATTAAGATTGCT-GGAAACGCA--A------ACGTAAACCG------------------ATAACAAGA-------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCTAACACAATTTCCGG---AAAA-TTGGGGGAACAC-------------------ATCCCA-TTATTT--GGCGGTCGCCCG-GTGTGGCAGCCCTGGTAGCAGCCCTGGTAGCTGGGTT-GCGAT-------AT------ATCG--------ACCTTGATACACCAACTGCCATCCCCATCAC--TCTGGGTTGTTTTTTTTTTGC-GTTTTTGCATAACAAAATCATA-GAATTTCGGC--------------------CTAAA-CGCCAGCGA--------TCTCTGACCAGGAGAGCACGAGC-----------------A----CAGGA-----GCGGGACA-TCTCACTTGG-------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................TCATA-GAATTTCGGC--------------------CTA...........................................................................................................1812.00202000000000000000
......................................................................................................................................................................................................................................................................................................AGGAGAGCACGAGC-----------------A----CAGGA-----GCGGG...........................2511.00100000000001000000
...............................................................................................................................................................................................................................................................................................TCTGACCAGGAGAGCACGAGC-----------------A----CAGG......................................2611.00100000010000000000
........................................................................................................................................................................................................................................................................AAA-CGCCAGCGA--------TCTCTGA................................................................................1911.00110000000000000000
.......................................................................................................................................................................................................................................................................TAAA-CGCCAGCGA--------TCTCTGACCAGGA..........................................................................2611.00100000001000000000
.............................................................................................................................................................................................................................................................................GCCAGCGA--------TCTCTGACCAGGAG.........................................................................2211.00100100000000000000
.......................................................................................................................................................................................................................................................................TAAA-CGCCAGCGA--------TCTCTGACCAGG...........................................................................2511.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................AGGA-----GCGGGACA-TCTCACTT...............2011.00100000000000100000
.................................................................................................................................................................................................................................ATCATA-GAATTTCGGC--------------------CTA...........................................................................................................1911.00110000000000000000
.................................................................................................................................................................................................................................................................................GCGA--------TCTCTGACCAGGAGAG.......................................................................2011.00110000000000000000
.......................................................................................................................................................................................................................................................................TAAA-CGCCAGCGA--------TCTCTGACCAGGAG.........................................................................2711.00100000001000000000
...............................................................................................................................................................................................................................................................................................TCTGACCAGGAGAGCACGAGC-----------------A----CAG.......................................2511.00100000000000010000
................................................................................................................................................................................................................................................GC--------------------CTAAA-CGCCAGCGA--------TCTCTGACCA.............................................................................2611.00100000001000000000
................................................................................................................................................................................................................................AATCATA-GAATTTCGGC--------------------CTAAA-CGCCAGC.................................................................................................2911.00100010000000000000
droSec2
TCTAACACAATTTCCGG---AAAA-TTGGGGGAACAC-------------------ATCCCA-TTATTT--GGCGCTCGCCCG-GTGTGGCAGCCCTG------------GTAGCTGGGTT-GCGAT-------AT------ATCG--------ACCTTGATACACCAACTGCCATCCCCATCAC--TCTGGGTTGTTTTTTTTTTGC-GTTTTTGCATAACAAAATCATA-GAATTTCGGC--------------------CCAAA-CGCCAGCGA--------TCTCTGACCAGGAGAGCACGAGC-----------------A----CAGGA-----GCGGGACA-TCTCACTTGG-------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................ATCATA-GAATTTCGGC--------------------CCA...........................................................................................................1911.0010100
..............................................................................................................................................................................................................................................................................CCAGCGA--------TCTCTGACCAGGAGAG.......................................................................2311.0010010
........................................................................................................................................................................................................................................GAATTTCGGC--------------------CCAAA-CGCCAGCGA--------TCT....................................................................................2711.0011000
...........................................................................................................................................................................................................................................................................................................AGCACGAGC-----------------A----CAGGA-----GCGG............................1911.0010010
...............................................................................................................................................................................................................................................................................................TCTGACCAGGAGAGCACG...................................................................1811.0010010
..............................................................................................................................................................................................................................................................................CCAGCGA--------TCTCTGACCAGG...........................................................................1911.0010010
................................................................................................................................................................................................................................................GC--------------------CCAAA-CGCCAGCGA--------TCT....................................................................................1911.0010001
dm3
TCAAACACAATTGCCGG---AAAA-TTGGGGAAAAAT-------------------ATCGCA-TTATTT--GGCGGTCGCCTA-GTGTGGCAGCCCTG------------GTAGCTGGGTT-GCGAT-------AT------ATCG--------ACCTTGATACACCTACTGCCATCCCCATCAC--TCTGGGTTGTTTT-TTTTTGC-GTTTTTGCATAACAAAATCCTA-GAATTTCGGC--------------------CTAAA-CGCCAGCGA--------TCTCTGACCAGCAGAGCACGAGC-----------------A----CAGGA-----GCGGCATA-TCTCACTTGG-------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................ACCAGCAGAGCACGAGC-----------------A----..........................................18119.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100100101000011100000000000000000001010000200000000000000000000001000001004000
..................................................................................................................................................................................................................................TCCTA-GAATTTCGGC--------------------CTAA..........................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GCACGAGC-----------------A----CAGGA-----GCGGC...........................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................................ACAAAATCCTA-GAATTTCGGC--------------------..............................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................CGCCAGCGA--------TCTCTGACCAGC...........................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................ACCAGCAGAGCACGAGC-----------------A----C.........................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................TCGGC--------------------CTAAA-CGCCAGCGA--------TCTCTGA................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................A--------TCTCTGACCAGCAGAGCACGAGC-----------------A----..........................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GCAGAGCACGAGC-----------------A----CAGGA-----GC..............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000
................................................................................................................................................................................................................................AATCCTA-GAATTTCGGC--------------------CTAA..........................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGAGCACGAGC-----------------A----CAGGA-----GCGGC...........................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................ACAAAATCCTA-GAATTTC.....................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GCGA--------TCTCTGACCAGCAGA........................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................GGC--------------------CTAAA-CGCCAGCGA--------TCT....................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................A--------TCTCTGACCAGCAGAGCACG...................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................ACCAGCAGAGCACGAGC-----------------A----CAGGA-----G...............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.........................................................................CGGTCGCCTA-GTGTGGCA........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................CAGCGA--------TCTCTGACCAGCA..........................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GCACGAGC-----------------A----CAGGA-----GCGG............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................AC--TCTGGGTTGTTTT-TTTTTGC-GTTTT..............................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................GAATTTCGGC--------------------CTAAA-CGCCAG..................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................TCGGC--------------------CTAAA-CGCCAGCGA--------TCTCTGAC...............................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TGACCAGCAGAGCACGAGC-----------------...............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........TTGCCGG---AAAA-TTGGGGAAAAAT-------------------ATCG........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGAGCACGAGC-----------------A----CAGGA-----GCGG............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................................................CTGGGTTGTTTT-TTTTTG.....................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GAGCACGAGC-----------------A----CAGGA-----GCGGCATA-TC.....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TGGGTTGTTTT-TTTTTGC-GTTTTTGC...........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AGCACGAGC-----------------A----CAGGA-----GCGGC...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TCAC--TCTGGGTTGTTTT-TTTTTGC-GT.................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GCCAGCGA--------TCTCTGACCAGCAGAGCA.....................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................AC--TCTGGGTTGTTTT-TTTTTGC-GT.................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TATTT--GGCGGTCGCCTA-GTGTGGCAA.......................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................ATTTCGGC--------------------CTAAA-CGCCAGCGA--------TC.....................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TTTCGGC--------------------CTAAA-CGCCAGCGA--------TCTCTG.................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................................................................................................................................................................................................TCGGC--------------------CTAAA-CGCCAGCGA--------T......................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGCAGAGCACGAGC-----------------A----CAGGA-----GCGGC...........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
....................................................................................................................................................................................................................................................................................................CCAGCAGAGCACGAGC-----------------A----CAGGA-----GCGGCAT.........................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................CCAGCGA--------TCTCTGACCAGCAGAG.......................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................AC--TCTGGGTTGTTTT-TTTTTG.....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................ACACCTACTGCCATCCCCATC.............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TCGGC--------------------CTAAA-CGCCAGCGA--------TCTCTGACC..............................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................ATCCTA-GAATTTCGGC--------------------CTAAA-CG......................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGAGCACGAGC-----------------A----CAGGA-----GCGGCAT.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..................................................................................................................................................................................................................................TCCTA-GAATTTCGGC--------------------CTAAA-CGCCAG..................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................AA-CGCCAGCGA--------TCTCTGACCAGCAGAG.......................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................GC--------------------CTAAA-CGCCAGCGA--------TCTCTGACC..............................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................AGGA-----GCGGCATA-TCTCAC.................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TAACAAAATCCTA-GAATTTCGGC--------------------..............................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................A----CAGGA-----GCGGCATA-TCTCA..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................GATACACCTACTGCCATCCCC................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TGACCAGCAGAGCACGAG.................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................AC--TCTGGGTTGTTTT-TTT........................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..........................................................................................................................................................................................................................................................................................................GAGCACGAGC-----------------A----CAGGA-----GCGGC...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................................................................................................................................................................................................................................................CACGAGC-----------------A----CAGGA-----GCGGC...........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TGACCAGCAGAGCACGAGC-----------------A----CAG.......................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................GACCAGCAGAGCACGAGC-----------------A----CAGGA-----G...............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................T-GCGAT-------AT------ATCG--------ACCTTGATACACC.............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................A-GAATTTCGGC--------------------CTAAA-CGCC....................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................CCTA-GAATTTCGGC--------------------CTAAA-CG......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................A-GAATTTCGGC--------------------CTAAA-CGCCAGCGA--------TCT....................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................CTACTGCCATCCCCATCAC--TCT......................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GCGA--------TCTCTGACCAGCAGAGCA.....................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TCTGACCAGCAGAGCACGAGC-----------------A----CAGGA-----GCG.............................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................CCAGCGA--------TCTCTGACCAGCAGAGCACG...................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................AATTTCGGC--------------------CTAAA-CGCCAGCGA--------T......................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CAGCAGAGCACGAGC-----------------A----CAGGA-----GC..............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GCCAGCGA--------TCTCTGACCAGCAGAGCATC...................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................CAGAGCACGAGC-----------------A----CAGGA-----G...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................................................TGCCATCCCCATCAC--TCTGGGT..................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................AGAGCACGAGC-----------------A----CAGGA-----G...............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................A-CGCCAGCGA--------TCTCTGACCAGCAGA........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GAGCACGAGC-----------------A----CAGGA-----GCGGCATA-T......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.................................................................................................................................................................................CCCATCAC--TCTGGGTTGTTTT-TTT........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................CCAGCAGAGCACGAGC-----------------A----CAGGA-----G...............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TAAA-CGCCAGCGA--------TCTCTGACCAGC...........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................GACCAGCAGAGCACGAGC-----------------A----..........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................GACCAGCAGAGCACGAGC-----------------...............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GCCAGCGA--------TCTCTGACCAGCAGA........................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TCCTA-GAATTTCGGC--------------------CTAAA-CGCCAGC.................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ATTT--GGCGGTCGCCTA-GTGTGTG.........................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................................TCCTA-GAATTTCGGC--------------------CTAAA-CGC.....................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................................................................................GTGGCAGCCCTG------------GTAGCTGGGTT-GCGAT-------..............................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATCAC--TCTGGGTTGTTTT-TTT........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..............................................................................................................................................................................ATCCCCATCAC--TCTGGGTT.................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GGA-----GCGGCATA-TCTCACTTGG-------------2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AGCACGAGC-----------------A----CAGGA-----GCGG............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
............................................................................................................................................................................................CTGGGTTGTTTT-TTTTTGC-GT.................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................CGA--------TCTCTGACCAGCAGAGCA.....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................GATACACCTACTGCCATCCC.................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGAGCACGAGC-----------------A----CAGGA-----GCG.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTAAACACAATTGCCAG---AAAA-TTGGGAAAAATC-------------------ATCGCT-TTGTTT--TGCGGTCGCCCA-GTGTGGCAGCCCTG------------GCAGCTGGGTT-GCGAT-------AT------ATCG--------ACCTTGATACACCAACTGCCATCCCCATCACTCTCTGAGTTGTTTTTTTTTTGC-GTCTTTGCATAACAAAATCTTA-GAATTTCGGC--------------------CAAAA-CGCCAGCGA--------TCTCTGACCAGAAGATCACGAGA-----------------A----CAGGA-----GCGGCACA-ACTCATTTGG-------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................AAGATCACGAGA-----------------A----CAGGA-----G...............................1911.0010000100
.......................................................................................................................................................................AACTGCCATCCCCATCACTCTCTGAGTTT................................................................................................................................................................................2911.0011000000
.................................................................................................................................................................................................................................................................................................................AGA-----------------A----CAGGA-----GCGGCACA-ACT....................2011.0010000100
...........................................................................................................................................................................................................................................................................................................ATCACGAGA-----------------A----CAGGA-----GCGGCACA-AC.....................2511.0010000100
...................................................................................................................................................................................................................................................................................GA--------TCTCTGACCAGAAGATC......................................................................1911.0010000010
droYak3
TTAAACACAATTGCCGA---AAAAATAGGGGAAGAAC-------------------ATCGCA-TTGTTT--TGCGGTCGCCCG-GTGTGGCAGCCCTG------------GCAGCTGGGTT-GCGAT-------AT------ATCG--------ACCTTGGTACACCAACTGCCATCCCCATCACTCTCTGGGTTGTTTT--TTTTGC-GTTTTTGCATAACAAAATCTGG-GAATTTCGGC--------------------TAAAAGCGCCAGCGA--------TCTCTGTCCAGGAGAGCACGAGA-----------------A----CAGGA-----GCGGCACA-TCTCACTTGG-------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................AAAAGCGCCAGCGA--------TCTCTGTCCA.............................................................................2411.00101000000000
...........................................................................................................................................................................................................................................................................................................AGCACGAGA-----------------A----CAGGA-----GCGG............................1911.00100100000000
................................................................................................................................................................................................................................................................................AGCGA--------TCTCTGTCCAGGA..........................................................................1811.00110000000000
...................................................................................................................................................................................................................................CTGG-GAATTTCGGC--------------------TAAAAGCGC.....................................................................................................2311.00100000010000
.................................................................................................................................................................................................................................ATCTGG-GAATTTCGGC--------------------TAAAAGCG......................................................................................................2411.00100100000000
.....................................................................................................................................................................................................................TTGCATAACAAAATCTGG-GAATTTCGGC--------------------..............................................................................................................2811.00100000010000
................................................................................................................................................................................................................................................................................................................GAGA-----------------A----CAGGA-----GCGGCACA-TCT....................2111.00100000010000
..................................................................................................................................................................................................................................................................................................................GA-----------------A----CAGGA-----GCGGCACA-TCT....................1911.00101000000000
...................................................................................................................................................................................................................................................................................GA--------TCTCTGTCCAGGAGAGCACGAGA-----------------A----CAG.......................................2911.00100100000000
droEug1
TTAAGCCCAATTGTCA---------TTGGACAAAAAC-------------------ATCGTT-GTGCTT--TACAGTGGCCCG-GTGTGGCAGCCCTG------------GCAGTTGGGTT-GTGATATA-GGTAT------ATCGATAGCCCAACCTTGATACATCAACTGCCATCC-CATCTC--ACTCGGTTGTTTT--TTTTGC-GTTTTTGCATAACAAAATCTTG-GAAATTCGCC--------------------CAAAA-GACAGGCGT--------TTGCGAACCCGGAGACCAGAAGA-----------------C----CAGGA-----GCGGCATA-TCCCACTTCC-------------SizeHit CountTotal NormTotal
No Reads
droBia1
TTAAAC-CAAACGACGG---CGTT-TTAGGGTTAAAC-------------------ATAGCT-GAGCTT--G--------CCG-GTGTGGCAGCCCTG------------GCAGCCGGG-T-GCGATAGC-GGAGT------ATCGATAGCGCAACCTTGATACATCGACTGCCATCC-CATCTCTCTCTCGGTTGTTTT--TTTTGC-GTTTTTGCATAACAAAATCTTG-GAAATTCGCC--------------------CAAAA-CGCAGGCGA--------TTGCGGACTCGGAG--------A-----------------C----CAGGA-----GCGGCACA-TCCCACTTGC-------------SizeHit CountTotal NormTotal
No Reads
droTak1
TTAAACCGAATTGTCGG---TGGAATTGGAGA-AACT-------------------ATCGCT-GTGCTT--GGG--------G-GTGTGGCAGCCCTG------------GCAGCCGGG-T-GCGATATC-GGTAC------ATCGATAGCGCAACCTTGATACATCGACTGCCATCCTC-------GTTCGGTTGTTT---TTTTGC-GTTTTTGCATAACAAAATCTTG-GAAATTCGCC--------------------CCAAAACACAGGCCA--------TC-------------------GA-----------------C----CAGGA-----GCGGCACA-TCCCACTTGC-------------SizeHit CountTotal NormTotal
No Reads
droEle1
TTGAACACATTTTTTGGTGAAAAC-TTTG--AAAAGC-------------------ATTGCT-GTTTTTGTTACAGTGACCCA-GTGTGGCAGCCCTG------------GTAGCTGGGCT-GTGGGAGC-GATAT------ATCGGTATCGCAATC-TGGCACACCAACTGCCATCC-CATCTCTTTCTCGGTTGTTT---TTTTGC-GTTTTTGCATAACAAAATCTAA-AAAATTCGCC--------------------CAAAA-CGCAAGCAA--------TAGCGGATACGGAGACCAGGAGA-----------------C----CAGCA-----GCGGCACA-ACCCCATTGC-------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTAAATACAATTTTTGGTGGAAAT-TTTACAAAAAAA-------------------AACTA--------------ACTGCCCA-GTGTGGTAGCTCTG------------GCAGCTGGGTTTGCGATAGC-GATAC------ATCGTTAACGCAATC-TGGTACACTAACTGCTATCC-CATCTCTCTCTCGGTTGTTTT--TTTTGC-GTTTTTGCATAACAAAATCTAAAAAAATTCGCC--------------------CAAAA-CGCAAGCGA--------TCAGGGACACGGAGATTAGGAGA-----------------C----CAAGT-----GCGGCACA-TCGCCCTTGC-------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTAAACTCGACCGCCGGTGA-TTA-TTTTCAAAATAA-------------------TTCGCTATTTTTT--GGCGGTGGCCTACGCGTGGCAGCCCTG------------GC-GCTGTGCT-GCGATAGC-GATAC------ATCGATAACGCAACCTTGATACACTAACTGCCATCCC-AACTCACTCTTGGTTGTTTT--TTTTGC-GTTTTTGCATAACAAAATCTTG-GAAATTCGCC--------------------CAAAA-CGCAGGCGA--------TTGCGGAAACGGAGTTCAGGAGA-----------------C----CAGGA-----GAGGCACA-TCCCACCTTC-------------SizeHit CountTotal NormTotal
No Reads
droKik1
GCTGTTTAAATTTTCTG---AAGT-T-------ATTAATTGTTGATTTTGTTGGACA-----------T--TGCTACCG-CTG-GTCTGGCAGCCCCA------------T--CTTGGGTT-GCGATAACCGTTACCCGATAGCCGATAGCACAACCTTGATACATCAGCTGCCATCCCCATCTCTCTCTTGGTTGTTT---TTTTGC-GTTTTTGCATAACAAAATCTCG-GATACTTGCC--------------------CGAAA-CGAGCACCA--------TTGCGGATACAGTGACCAGGAGA-----------------C----CACGA-----GAGGCACA-TCCCACTCGC-------------SizeHit CountTotal NormTotal
No Reads
droAna3
CC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCCATCC----------CTCGGTTGTTT---TTTTGC-GTTTTTGCATAACAAAATATCG-AAAACTCGCC--------------------CGAAT-CGA------------------------------------A-----------------C----CAGGA-----GAGGCACA-ACCCAGTTGCTGGAGGCAGTTGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................ATATCG-AAAACTCGCC--------------------CGAAT-CGA------------------------------------.................................................................2411.001010000
.........................................................................................................................................................................................................................................................................AT-CGA------------------------------------A-----------------C----CAGGA-----GAGGCACA-ACCCA..................2511.001001000
................................................................................................................................................................................................................................AATATCG-AAAACTCGCC--------------------CGAAT-CGA------------------------------------A-----------------C----C.........................................2811.001100000
............................................................................................................................................................................................................................................................................CGA------------------------------------A-----------------C----CAGGA-----GAGGCACA-.......................1811.001100000
..............................................................................................................................................................................................................................................................................A------------------------------------A-----------------C----CAGGA-----GAGGCACA-ACCCA..................2111.001010000
.............................................................................................................................................................................................................................................................................GA------------------------------------A-----------------C----CAGGA-----GAGGCACA-ACCC...................2111.001000001
droBip1
CC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCCATCC----------CTCGGTTGTTT---TTTTGC-GTTTTTGCATAACAAAATCTAG-GAAACTCGCC--------------------CGAAT-CGA------------------------------------A-----------------C----AAGGA-----GAGACACA-ACCCAGTTGCTGGAGGCAG---GSizeHit CountTotal NormTotal
No Reads
dp5
TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCC-ATTTTTGCATAACAAAATCAAA-GAAATTAAGTCATTTAATTTAAATTTAATTT-AAA-AGTAAGCAT-------------------------AAGAAG--CGGGGAACGACCAGGC----TAAGGCAAGCGCAGC----ACACACATTG-------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................GAAG--CGGGGAACGACCAGG...............................................1911.0010010000000
droWil2
TAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTTGCATAACAAAATCTTT-TAAAATTACC-------------------GTACAACCACAAGCGA--------AAGT-AATCAAAATTACAAAAAA--GAATAAACGGTTACATAAAGCG--ATAAG--CGTTGTGTACTTACAAAG-------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................................................GCG--ATAAG--CGTTGTGTACT....................1911.001000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................G--ATAAG--CGTTGTGTACTTACA................2111.001000000000000000000000000000000000100000000000000000000000000000
.......................................................................................................................................................................................................................................................................ACAACCACAAGCGA--------AAGT-AA................................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TAAAGCG--ATAAG--CGTTGTG........................1911.001000000001000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................ACATAAAGCG--ATAAG--CGTT...........................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GCG--ATAAG--CGTTGTGTACTTA..................2111.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
CGATACGC----------------------------------------------------------------------------------------------------------------------------------------GT--------GTCTTTATAAATCAGCTGCCGTCTC------------GGTTGTA-----TCTGCGGTTTTTGCATAACAAAATCTTT-AA-ATTATCC--------------------TAAAACCACAAGAAAGAGAGGGAGAGT-AACCAAAATT-GACGAAAACGAA--A------ACGTAAAGCGATA-----ACGTAGTGTACTTACGTAT-------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................TTTATAAATCAGCTGCCGTC...................................................................................................................................................................................................2011.001000001
........................................................................................................................................................................................................................................................................................................AATT-GACGAAAACGAA--A------AC................................................1911.001000010
..........................................................................................................................................................................TGCCGTCTC------------GGTTGTA-----TCTGC....................................................................................................................................................................2111.001000001
......................................................................................................................................................................................................................................................................TAAAACCACAAGAAAGAGAGGGAGAG....................................................................................2611.001100000
..................................................................................................................................................................AAATCAGCTGCCGTCTC------------GG...................................................................................................................................................................................1911.001100000
..........................................................................................................................................................................................................................................................................ACCACAAGAAAGAGAGGGAGAGT-AA................................................................................2511.001000001
....................................................................................................................................................................................................................................TTT-AA-ATTATCC--------------------TAAAACCA......................................................................................................2011.001000010
............................................................................................................................................................................................................................................................................CACAAGAAAGAGAGGGAGAG....................................................................................2011.001000100
.............................................................................................................................................................................CGTCTC------------GGTTGTA-----TCTGC....................................................................................................................................................................1811.001000010
droGri2
GTT--------------------------------------------------------------------------------------------------------------GTAGAGTA-TCGAT-------AC------GCTT--------GTCTAAATAAATCAGCTGCCGTTTC------------GGCTGTA-----TCTGCGGTCTTTGCATAACAAAATTCATCAAAATTCACT-------------------GCAAATCCGCCAGAGA--------AATT-CATTAAGATTGCT-GGAAACGCA--A------ACGTAAACCG------------------ATAACAAGA-------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................TCACT-------------------GCAAATCCGCCAGAGA--------.......................................................................................2111.00110

Generated: 05/18/2015 at 09:01 PM