dsi_3340

exon [2l_4807646_4807751_-]; CDS [2l_4807646_4807751_-]; CDS [2l_4807515_4807584_-]; exon [2l_4807453_4807584_-]; intron [2l_4807585_4807645_-]

##################################################-------------------------------------------------------------################################################## GACACCCACTTGGATCTGGTGCGCAGCAAATTGACAGAAATCACCGACAAGTGAGTTTAACCATCCAAAATCCCCGTAAGAAAGATATTCTAAATCGCTGTTGTGTTCCAGGATCCGAGTGGCCATCCCCATTGGCAACAAGAAGCCCGTGGCCGCTGCCG ************************************************.............................................(((....)))......************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR618934 dsim w501 ovaries	M053 female body	SRR553486 Makindu_3 day-old ovaries	SRR553485 Chicharo_3 day-old ovaries	M023 head	M024 male body	SRR902008 ovaries	GSM343915 embryo	SRR553487 NRT_0-2 hours eggs
...................................TGAAATCAGCGACAAGTAAGTT........................................................................................................	22	3	1	1.00	1	0	0	1	0	0	0	0	0	0
.............ATCTGGTGCGCAGCAAATTGACA.............................................................................................................................	23	0	1	1.00	1	0	1	0	0	0	0	0	0	0
..................................................................................................................CCGAGTGGCCATCCCCA..............................	17	0	1	1.00	1	1	0	0	0	0	0	0	0	0
..............................TTGACAGAAATCACCGACAAG..............................................................................................................	21	0	1	1.00	1	0	0	0	0	0	1	0	0	0
.CCACCCACTTGGATCTGGTGCGCA........................................................................................................................................	24	1	1	1.00	1	0	1	0	0	0	0	0	0	0
...................................................................................................................................TTGGCAACAAGAAGCCCGTGGCCGC.....	25	0	1	1.00	1	0	0	0	0	0	0	1	0	0
........................................................................................................GTTCCAGGATCCGAGTGGC......................................	19	0	1	1.00	1	0	0	0	0	1	0	0	0	0
...................................................................................................................CGAGTGGCCATCCCCATTGGCAACA.....................	25	0	1	1.00	1	0	0	0	0	0	0	0	1	0
............................................................................................AATCGATCTTGTGTTCCAGGA................................................	21	2	1	1.00	1	0	0	1	0	0	0	0	0	0
.............................ATTGACAGAAATCACCAACAAG..............................................................................................................	22	1	1	1.00	1	0	1	0	0	0	0	0	0	0
..............................TTGACAGAAATCACCGACAAGATC...........................................................................................................	24	3	1	1.00	1	0	0	0	1	0	0	0	0	0
..............................................................................................................AGATCCGAGTGGCCATCCCCATTGGC.........................	26	1	1	1.00	1	1	0	0	0	0	0	0	0	0
.............................................................................................ATCGCTGTTGTGTTCCA...................................................	17	0	1	1.00	1	1	0	0	0	0	0	0	0	0
...........................................................................................AAATCGCTGTTGTGTTCCAG..................................................	20	0	1	1.00	1	1	0	0	0	0	0	0	0	0
................................GACAGAAATCACCGAA.................................................................................................................	16	1	3	0.33	1	0	0	0	1	0	0	0	0	0
...ACCGACTTAGAACTGGTGCG..........................................................................................................................................	20	3	4	0.25	1	0	0	0	0	0	0	0	0	1
...........................................................................................................ACAAGATCCGAGTGGCCAT...................................	19	2	5	0.20	1	0	0	1	0	0	0	0	0	0
...................................AGAAATCAAGGACAAGTGC...........................................................................................................	19	3	20	0.05	1	0	0	0	0	1	0	0	0	0
................................................................CCCAAATCTCGGTAAGAAA..............................................................................	19	3	20	0.05	1	0	0	0	1	0	0	0	0	0

CTGTGGGTGAACCTAGACCACGCGTCGTTTAACTGTCTTTAGTGGCTGTTCACTCAAATTGGTAGGTTTTAGGGGCATTCTTTCTATAAGATTTAGCGACAACACAAGGTCCTAGGCTCACCGGTAGGGGTAACCGTTGTTCTTCGGGCACCGGCGACGGC ************************************************.............................................(((....)))......************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR618934 dsim w501 ovaries	M023 head	SRR553488 RT_0-2 hours eggs	M024 male body
...........................................GGCTGTTCACTCAAATTGGTA.................................................................................................	21	0	1	1.00	1	1	0	0	0
..GTGGGTGAACCTAGACCA.............................................................................................................................................	18	0	1	1.00	1	0	1	0	0
..............ATGCCACGCGTTGTTTAACT...............................................................................................................................	20	3	16	0.06	1	0	0	1	0
...............................................................................................................................................GCGGGCACCGGCGACCG.	17	2	20	0.05	1	1	0	0	0
...............................................................................................................................................TCGGATACCGGCGACG..	16	2	20	0.05	1	1	0	0	0
......................................................................CGGGCCATTCGTTCTATA.........................................................................	18	3	20	0.05	1	0	0	0	1

Species	Coordinate	ID	Alignment
droSim2	2l:4807535-4807695 -	dsi_3340	GACACCCACTTGGATCTGGTGCGCAGCAAATTGACAGAAATCACCGACAAGTGAGTTTAAC-------------------------CAT--------------C-----CAAAAT-CCCC-GT------------------------------------------AAGAAA----------GATA------------T--T------CTA-------------AATCGCT---GT-------TGT-------------------GTTCCAGGATCCGAGTGGCCATCCCCATTGGCAACAAGAAGCCCGTGGCCGCTGC------CG
droSec2	scaffold_5:3080843-3081003 -		GACACCCACTTGGATCTGGTGCGCAGCAAATTGACAGAAATCACCGACAAGTGAGTTTAAC-------------------------CAT--------------C-----CAAAAT-CCCC-GT------------------------------------------AAGAGA----------GATA------------T--T------CTA-------------AATCGCT---TT-------TGT-------------------GTTCCAGGATCCGAGTGGCCATCCCCATTGGCAACAAGAAGCCCGTGGCCGCTGC------CG
dm3	chr2L:4994228-4994388 -		GACACTCACTTGGATCTGGTGCGCAGCAAATTGACAGAAATCACCGACAAGTGAGTTTAAC-------------------------CAT--------------T-----TAAAAT-CTCC-GT------------------------------------------AAGAAA----------GATA------------T--T------CTA-------------AATCGCT---TT-------TGT-------------------GTTCCAGGATCCGAGTGGCCATCCCCATTGGCAACAAGAAGCCCGAGGCCGCTGC------CG
droEre2	scaffold_4929:5072336-5072496 -		GACACCTACTTGGATCTGGGGCGCAGCAAATTGGCAGAAATCACCGACAAGTGAGTTTGGC-------------------------CGT--------------C-----TTTAAT-CCCT-GT------------------------------------------AAAACA----------GATA------------T--T------CTA-------------AATCGCG---TT-------TAT-------------------CTTCTAGGATCCGAGTGGCCATCCCCATTGGTAACAAGAAGCCCGTGGCCGCTGC------CG
droYak3	2L:10532607-10532765 +		GACACCTACTTGGATCTGGTGCGCAGCAAATTGACAGAAATCACCGACAAGTAAGTTTGGC-------------------------CAT--------------C-----TAAAAT-CTCC-GT------------------------------------------AAAACA----------GA--------------T--T------CTA-------------AATCGCT---GT-------TGT-------------------ATTCTAGGATCCGAGTAGCCATCCCCATTGGCAACAAGAAGCCCGTGGCCGCTGC------CG
droEug1	scf7180000409005:876574-876738 -		GACACCTACTTGGATTTGGTGCGCAGCAAATTGACAGAGATCACCGACAAGTAAGTTTTAC-------------------------AAGCT---------CAC----------------T--TAAATAAATCTTT-------------------------------------------------A------------T--G------CTAATATT-------AAT-CG--------AAATGTTTT-------------------CCTTCAGGATCCGAGTCGCTATCCCCATTGGCAACAAGAAGCCCGTGGTCGCTGC------CG
droBia1	scf7180000302261:417440-417601 -		GACACCTACTTGGACCTGGTGCGCAGCAAATTGACAGAGATCACCGACAAGTAAGCCCAGC-------------------------TCT----------CCCTC-----TAAAAT-CCTC---------------------------------------------AAGGAT----------GTCG------------T--A------CTA-------------AT-CCCA---CT-------TTT-------------------CCTTCAGGATCCGAGTGGCCATCCCCATTGGCAACAAGAAGCCCGTGGCCGCTGC------CG
droTak1	scf7180000415204:163711-163875 +		GACACCTACTTGGATCTGGTGCGCAGCAAATTGACAGAGATCACCGACAAGTATGTCTAGC-------------------------TCA----------ACCT-----TT-A-ATTCT-T-AT------------------------------------------AAATAT----------GT-T------------T--A------CTA-------------ATTCCCT---GA-------TTT-------------------CTTTAAGGATCCGAGTGGCCATCCCCATTGGCAACAAGAAGCCCGTGGCCGCCGC---CACCG
droEle1	scf7180000491273:246103-246266 +		GACACCTACTTGGATCTGGTGCGCAGCAAATTGACAGAAATCACCGACAAGTGAGTTTGGC-------------------------CCT--------------C-----TTAAAT-CTTA-GT------------------------------------------AGATGC----------GTT----------------A------TTA-------------ACTGTC-CATTT-------CGT-------------------TTTTTAGGATCCGGGTGGCCATTCCCATTGGCAACAAGAAGCCCGTGGCTGCTGC---CACTG
droRho1	scf7180000777055:60709-60874 -		GATACCTACTTGGATCTGGTGCGCAGCAAATTGACAGAAATCACCGACAAGTGAGTTTGGC-------------------------TAT--------------T-----CTAAAT-CT----T------------------------------------------AAGGGA----------TAGA----------T-T--T------CTA-------------AACTCC-CATTTCC--TATTTT-------------------CCTTCAGGATCCGAGTGGCCATCCCCATTGGCAACAAGAAGCCCGTGGCCGCTGC------CG
droFic1	scf7180000453842:1258105-1258263 +		GACACCTACTTGGATCTCGTGCGCAGCAAATTGACAGAAATCACCGACAAGTGAGTTGTAC-------------------------CAT--------------C-----TCA--T-CTCCTTT------------------------------------------AAGATA----------TAA----------------A------TTA-------------AATGATT---GG------TTTT-------------------GTTGCAGGATCCGAGTGGCCATCCCCATCGGCAACAAGAAGCCAGTGGCCGCCAC------TG
droKik1	scf7180000302271:110769-110933 -		GACACCTACTTGGATCTGGTGCGCAGCAAATTGACAGAGATCACCGACAAGTAAGTGTAGA-------------------------CCC--------------T-----TAAGAT-CCTT--T-------------------------------------------ATATA----------TATA------------T--A------CTA-------------ATTACTT---GA-------TTT----------CCATTT---AATCCAGGATCCGAGTGGCCATTCCCCTTGGTA---AGAAGCCAGTGGCTGCCGC---TGCCG
droAna3	scaffold_12916:13623855-13624014 -		GACACCTACTTGGATCTGGTGCGCAGCAAATTGACAGAAATCACCGACAAGTAAGTTTTAT-------------------------TTT--------------A-----TTAAA--------------------A------------------------AA----TATAAA----------TATA------------T--G------TTAAT--T-------AAT-T------TG-TAATGTTTT-------------------CCTGCAGGATCCGAGTGGCCATCCCCATTGGCAAAAATAAGCCCGTGGCCGC---------CG
droBip1	scf7180000396535:595294-595452 -		GACACCTACTTGGATTTGGTGCGCAGCAAATTGACAGAAATCACCGACAAGTATGTTTTGA-------------------------TTA----------TTAT----------------T--TATAAAAATATTT------------------------AT----AATTAT----------AATA----------------------------------------TTTA-------TAA--TTCT-------------------CCTACAGGATCCGAGTGGCCATCCCCATTGGCAAGAATAAGCCCGTGGCCGC---------CG
dp5	4_group4:1509350-1509513 -		GACACCTACTTGGACCTGGTGCGCAGCAAATTGACAGAGATCACCGACAAGTGAGTGTGGA-------------------------GTG----A-----GCCC-----CC-A-GGGAGA--A--------CAGAA------------------------AA----TATA-------------------------------A------CAA-------------AATCTCT---TT------CTTT-------------------TCCGTAGGATCCGAGTGGCCATCCCCATTGGCAACAAGAAGCCCGTGGCTGCTGC------CG
droPer2	scaffold_10:513108-513271 -		GACACCTACTTGGACCTGGTGCGCAGCAAATTGACAGAGATCACCGACAAGTGAGTGTGGA-------------------------GTG----A-----GCCC-----CC-A-GGGAGA--A--------CAGAA------------------------AA----TATA-------------------------------A------CAA-------------AATCTCT---TT------CCTT-------------------TCCGTAGGATCCGAGTGGCCATCCCCATTGGCAACAAGAAGCCCGTGGCTGCTGC------CG
droWil2	scf2_1100000004585:1777394-1777574 -		GATACCTACTTGGATTTGGTGCGCAGCAAATTGACTGAAATTACCGATAAGTAAGATCAAT-------------------------A---------------T----------------T--TATTTATATATAT-------------------------------AGAGA----------GATT----------T-GTTG------CTAATATCATGTTTTAAT-CTTT---CA-------TTT-------------------TGTTTAGAATCCGAGTGGCAATTCCCATTGGCAACAAGAAGCCGGTAGCTGCTGCCGCCACTG
droVir3	scaffold_12963:7836598-7836779 +	dvi_10794	GACACCTATTTGGATCTGGTGCGCAACAAGTTGACGGAAATCACCGACAAGTAGGAATCAC-------------------------ATA--------------A-----CCAAAT--------------------------------------------GC----CATAGG----------TTCA------------A--C------CTA-------------AACTGAT---GA-------TTTTTCCCTACCTTCATTTATTCCCACAGAATCCGGGTGGCTCTACCCATTGGCAACAAGAAGCCTGTGGCTGCTGCTGCTGCCG
droMoj3	scaffold_6500:3014929-3015096 -		GATACCTATTTGGATCTGGTGCGCAACAAGTTGACAGAGATTACCGACAAGTGAGATATAC-------------------------CAGCTAT------A--C----------------A--TATATATATATAT------------------------ATAGTCGA---A----------GA--------------T--G------TTA-------------AT-CTGT---TT-------ATG-------------------CTTTCAGAATCCGGGTAGCTCTGCCCATTGGCAACAAGAAGCCAGTCGCCGCCGC------CG
droGri2	scaffold_15252:10918264-10918531 +		GATACCTATTTGGATCTGGTGCGCACCAAGTTGACAGAAATCACCGATAAGTAAGCATCTACTTTATATATATTGGCATTTTTAGCACT-----TTCGAATCC-TTGTTC-A-AATTCA--A--------CACAACAAATTCGCATTAATTGCAAAAATGC----CATTGTCTTAAAAAGAGCTCATCTTTTACTTGGTTGTATTAACTATTAT--TGTTTTTTT-CTTTT--AA-------TTT-------------------CTTCTAGAATTCGGGTGGCCATTCCCATTGGCA---AGAAGCCTGTCGCCGCTGC---TACCG

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

GACACCCACTTGGATCTGGTGCGCAGCAAATTGACAGAAATCACCGACAAGTGAGTTTAAC-------------------------CAT--------------C-----CAAAAT-CCCC-GT------------------------------------------AAGAAA----------GATA------------T--T------CTA-------------AATCGCT---GT-------TGT-------------------GTTCCAGGATCCGAGTGGCCATCCCCATTGGCAACAAGAAGCCCGTGGCCGCTGC------CG	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.............ATCTGGTGCGCAGCAAATTGACA...................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................CCGAGTGGCCATCCCCA....................................	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..............................TTGACAGAAATCACCGACAAG....................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................TTGGCAACAAGAAGCCCGTGGCCGC...........	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................GTTCCAGGATCCGAGTGGC............................................	19	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................CGAGTGGCCATCCCCATTGGCAACA...........................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..............................TTGACAGAAATCACCGACAAGATC.................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................ATCGCT---GT-------TGT-------------------GTTCCA.........................................................	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.................................................................................................................................................................................................................A-------------AATCGCT---GT-------TGT-------------------GTTCCAG........................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
................................GACAGAAATCACCGAA.......................................................................................................................................................................................................................................................................................	16	3	0.33	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0

droSec2

GACACCCACTTGGATCTGGTGCGCAGCAAATTGACAGAAATCACCGACAAGTGAGTTTAAC-------------------------CAT--------------C-----CAAAAT-CCCC-GT------------------------------------------AAGAGA----------GATA------------T--T------CTA-------------AATCGCT---TT-------TGT-------------------GTTCCAGGATCCGAGTGGCCATCCCCATTGGCAACAAGAAGCCCGTGGCCGCTGC------CG	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
................................................................................................................................................................................................................................................................................ATCCGAGTGGCCATCCCCATTGGC...............................	24	1	2.00	2	0	0	2	0
.......ACTTGGATCTGGTGCGCA..............................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0
..................................................................................................................................................................................................................................................................................................ATTGGCAACAAGAAGCCCGTGGC..............	23	1	1.00	1	0	0	1	0
........................................................................................................................................................................................................................................................................................................AACAAGAAGCCCGTGGCCGCT..........	21	1	1.00	1	0	0	1	0
........................AGCAAATTGACAGAAATCACCGA........................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................AAGAAGCCCGTGGCCGCTGC------C.	21	1	1.00	1	0	0	1	0
GACACCCACTTGGATCTGGT...................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0
...ACCCACTTGGATCTGGTGCG................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0
........................................................................................................................................................................................................................................................................................................AACAAGAAGCCCGTGGCCGC...........	20	1	1.00	1	0	0	1	0
.......ACTTGGATCTGGTGCGCAGC............................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0
....................GCGCAGCAAATTGACAGA.................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
.......................................................................................................................................................................................................................................................................................................CAACAAGAAGCCCGTGGCC.............	19	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................................................................................ATCCGAGTGGCCATCCCCATTG.................................	22	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................................................................................ATCCGAGTGGCCATCCCCATTGGCA..............................	25	1	1.00	1	0	0	0	1
....................GCGCAGCAAATTGACAGAA................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0
....CCCACTTGGATCTGGTGCG................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0
.ACACCCACTTGGATCTGGTGCGCAGCA...........................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0
............................................................................................................................................................................................................................................................................................................AGAAGCCCGTGGCCGCTGC------..	19	1	1.00	1	0	0	1	0
....................................................................................................................................................................................................................................................................................................TGGCAACAAGAAGCCCGTGGC..............	21	1	1.00	1	0	0	0	1

dm3

GACACTCACTTGGATCTGGTGCGCAGCAAATTGACAGAAATCACCGACAAGTGAGTTTAAC-------------------------CAT--------------T-----TAAAAT-CTCC-GT------------------------------------------AAGAAA----------GATA------------T--T------CTA-------------AATCGCT---TT-------TGT-------------------GTTCCAGGATCCGAGTGGCCATCCCCATTGGCAACAAGAAGCCCGAGGCCGCTGC------CG	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
...ACTCACTTGGATCTGGTGCGC...............................................................................................................................................................................................................................................................................................................	21	1	26.00	26	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...ACTCACTTGGATCTGGTGCGCAGC............................................................................................................................................................................................................................................................................................................	24	1	13.00	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	4	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................ATA------------T--T------CTA-------------AATCGCT---TT-------TGT-------------------GTTCC..........................................................	25	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
...............CTGGTGCGCAGCAAATTGACAGAA................................................................................................................................................................................................................................................................................................	24	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................TA------------T--T------CTA-------------AATCGCT---TT-------TGT-------------------GTTCC..........................................................	24	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
......CACTTGGATCTGGTGCGC...............................................................................................................................................................................................................................................................................................................	18	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........TTGGATCTGGTGCGCAGCAA..........................................................................................................................................................................................................................................................................................................	20	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
GACACTCACTTGGATCTGGTGCGC...............................................................................................................................................................................................................................................................................................................	24	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...................................................................................................................................................................................................................................GCT---TT-------TGT-------------------GTTCCAGGATCCG..................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.ACACTCACTTGGATCTGGTGCGCAGCA...........................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................AGCAAATTGACAGAAATCACCGACA......................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......ACTTGGATCTGGTGCGCAGCAAA.........................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................TCCGAGTGGCCATCCCCATTGGCAAC............................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............GATCTGGTGCGCAGCAAATTGAC....................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................ATCGCT---TT-------TGT-------------------GTTCCAG........................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

GACACCTACTTGGATCTGGGGCGCAGCAAATTGGCAGAAATCACCGACAAGTGAGTTTGGC-------------------------CGT--------------C-----TTTAAT-CCCT-GT------------------------------------------AAAACA----------GATA------------T--T------CTA-------------AATCGCG---TT-------TAT-------------------CTTCTAGGATCCGAGTGGCCATCCCCATTGGTAACAAGAAGCCCGTGGCCGCTGC------CG	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
...............CTGGGGCGCAGCAAATTGGCA...................................................................................................................................................................................................................................................................................................	21	1	3.00	3	0	0	0	0	3	0	0
.....CTACTTGGATCTGGGGCGC...............................................................................................................................................................................................................................................................................................................	19	1	2.00	2	1	0	0	0	0	1	0
GACACCTACTTGGATCTGGGGCGC...............................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	1	1	0	0
......................................................................................................................................................................................................................................................................................................GTAACAAGAAGCCCGTGGCC.............	20	1	2.00	2	0	0	0	0	1	1	0
GACACCTACTTGGATCTGGGGC.................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	1	0	0	0	1	0	0
......................................................................................................................................................................................................................................................................................................GTAACAAGAAGCCCGTGGCCGCTGC------..	25	1	2.00	2	0	0	0	0	2	0	0
....CCTACTTGGATCTGGGGC.................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	1	0	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................ATTGGTAACAAGAAGCCCGTGGCC.............	24	1	2.00	2	1	0	0	0	1	0	0
.....CTACTTGGATCTGGGGCGCAGCAA..........................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................GTAACAAGAAGCCCGTGGCCGCTGC------C.	26	1	1.00	1	0	0	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................CATCCCCATTGGTAACAAGAAGCCC...................	25	1	1.00	1	0	0	0	0	1	0	0
..........................CAAATTGGCAGAAATCACC..........................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
...............CTGGGGCGCAGCAAATTGGC....................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0
GACACCTACTTGGATCTGGG...................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0
GACACCTACTTGGATCTGGGGCGCA..............................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0
..CACCTACTTGGATCTGGGGC.................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0
........CTTGGATCTGGGGCGCAGCAAATTG......................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................ATTGGTAACAAGAAGCCCGTG................	21	1	1.00	1	0	0	0	0	1	0	0
...............CTGGGGCGCAGCAAATTGGCAGAAATC.............................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0	0
..CACCTACTTGGATCTGGGGCGCAGC............................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................AACAAGAAGCCCGTGGCCGCT..........	21	1	1.00	1	0	0	0	0	0	1	0
.........TTGGATCTGGGGCGCAGCAAATT.......................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1	0
..............TCTGGGGCGCAGCAAATTGGCA...................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
..............TCTGGGGCGCAGCAAATTGGG....................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................AACAAGAAGCCCGTGGCCGCTGC------..	23	1	1.00	1	0	0	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................ATTGGTAACAAGAAGCCCGTGGC..............	23	1	1.00	1	0	0	0	0	1	0	0
...............................TGGCAGAAATCACCGACA......................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................CATCCCCATTGGTAACAAGAA.......................	21	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................CATTGGTAACAAGAAGCCC...................	19	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................CATCCCCATTGGTAACAAGAAGC.....................	23	1	1.00	1	0	0	0	0	1	0	0
..CACCTACTTGGATCTGGGGCGCAGCA...........................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1	0	0
..CACCTACTTGGATCTGGGG..................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0

droYak3

GACACCTACTTGGATCTGGTGCGCAGCAAATTGACAGAAATCACCGACAAGTAAGTTTGGC-------------------------CAT--------------C-----TAAAAT-CTCC-GT------------------------------------------AAAACA----------GA--------------T--T------CTA-------------AATCGCT---GT-------TGT-------------------ATTCTAGGATCCGAGTAGCCATCCCCATTGGCAACAAGAAGCCCGTGGCCGCTGC------CG	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...............................................................................................................................................................................................................................................................................GATCCGAGTAGCCATCCCCATTGG................................	24	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................CATCCCCATTGGCAACAAGAAGCCCGT.................	27	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
........................................................................................................................................................................................................................................................................................................AACAAGAAGCCCGTGGCCGCT..........	21	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
.............ATCTGGTGCGCAGCAAATTGACA...................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
............GATCTGGTGCGCAGCAAATTGACA...................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................AGCCATCCCCATTGGCAACA...........................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................CCGAGTAGCCATCCCCATTG.................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..CACCTACTTGGATCTGGTG..................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................AACAAGAAGCCCGTGGCCGCTG.........	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.........TTGGATCTGGTGCGCAGCAAATTGAC....................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................CAAGAAGCCCGTGGCCGCTGC------C.	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................AACAAGAAGCCCGTGGCCGCTGC------C.	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........CTTGGATCTGGTGCGCAGCA...........................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................GCCATCCCCATTGGCAACAAGA........................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................TGGCAACAAGAAGCCCGTGGCCGC...........	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................TTGACAGAAATCACCGACAAG....................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................AGTAGCCATCCCCATTGG................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................AAGAAGCCCGTGGCCGCTGC------..	20	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
.....CTACTTGGATCTGGTGCGCAGCA...........................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................GAGTAGCCATCCCCATTGGC...............................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................GTAAGTTTGGC-------------------------CAT--------------C-----TAAAAT-CTCC-GC------------------------------------------..................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................ATTGGCAACAAGAAGCCCGTGGCC.............	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................CAACAAGAAGCCCGTGGCCGCT..........	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............GATCTGGTGCGCAGCAAATTGAC....................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................AACAAGAAGCCCGTGGCCGCTGC------..	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............ATCTGGTGCGCAGCAAATTGAC....................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................CTCC-GT------------------------------------------AAAACA----------GA--------------T--T------CTA-------------AATCGCT---..............................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................ATCCCCATTGGCAACAAGAAGCCCGT.................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............ATCTGGTGCGCAGCAAATT.......................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................AGCCATCCCCATTGGCAACAAGA........................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................AAATTGACAGAAATCACCGACAA.....................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0

droEug1

GACACCTACTTGGATTTGGTGCGCAGCAAATTGACAGAGATCACCGACAAGTAAGTTTTAC-------------------------AAGCT---------CAC----------------T--TAAATAAATCTTT-------------------------------------------------A------------T--G------CTAATATT-------AAT-CG--------AAATGTTTT-------------------CCTTCAGGATCCGAGTCGCTATCCCCATTGGCAACAAGAAGCCCGTGGTCGCTGC------CG	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GACACCTACTTGGACCTGGTGCGCAGCAAATTGACAGAGATCACCGACAAGTAAGCCCAGC-------------------------TCT----------CCCTC-----TAAAAT-CCTC---------------------------------------------AAGGAT----------GTCG------------T--A------CTA-------------AT-CCCA---CT-------TTT-------------------CCTTCAGGATCCGAGTGGCCATCCCCATTGGCAACAAGAAGCCCGTGGCCGCTGC------CG	Size	Hit Count	Total Norm	Total
No Reads

droTak1

GACACCTACTTGGATCTGGTGCGCAGCAAATTGACAGAGATCACCGACAAGTATGTCTAGC-------------------------TCA----------ACCT-----TT-A-ATTCT-T-AT------------------------------------------AAATAT----------GT-T------------T--A------CTA-------------ATTCCCT---GA-------TTT-------------------CTTTAAGGATCCGAGTGGCCATCCCCATTGGCAACAAGAAGCCCGTGGCCGCCGC---CACCG	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GACACCTACTTGGATCTGGTGCGCAGCAAATTGACAGAAATCACCGACAAGTGAGTTTGGC-------------------------CCT--------------C-----TTAAAT-CTTA-GT------------------------------------------AGATGC----------GTT----------------A------TTA-------------ACTGTC-CATTT-------CGT-------------------TTTTTAGGATCCGGGTGGCCATTCCCATTGGCAACAAGAAGCCCGTGGCTGCTGC---CACTG	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GATACCTACTTGGATCTGGTGCGCAGCAAATTGACAGAAATCACCGACAAGTGAGTTTGGC-------------------------TAT--------------T-----CTAAAT-CT----T------------------------------------------AAGGGA----------TAGA----------T-T--T------CTA-------------AACTCC-CATTTCC--TATTTT-------------------CCTTCAGGATCCGAGTGGCCATCCCCATTGGCAACAAGAAGCCCGTGGCCGCTGC------CG	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GACACCTACTTGGATCTCGTGCGCAGCAAATTGACAGAAATCACCGACAAGTGAGTTGTAC-------------------------CAT--------------C-----TCA--T-CTCCTTT------------------------------------------AAGATA----------TAA----------------A------TTA-------------AATGATT---GG------TTTT-------------------GTTGCAGGATCCGAGTGGCCATCCCCATCGGCAACAAGAAGCCAGTGGCCGCCAC------TG	Size	Hit Count	Total Norm	Total
No Reads

droKik1

GACACCTACTTGGATCTGGTGCGCAGCAAATTGACAGAGATCACCGACAAGTAAGTGTAGA-------------------------CCC--------------T-----TAAGAT-CCTT--T-------------------------------------------ATATA----------TATA------------T--A------CTA-------------ATTACTT---GA-------TTT----------CCATTT---AATCCAGGATCCGAGTGGCCATTCCCCTTGGTA---AGAAGCCAGTGGCTGCCGC---TGCCG	Size	Hit Count	Total Norm	Total
No Reads

droAna3

GACACCTACTTGGATCTGGTGCGCAGCAAATTGACAGAAATCACCGACAAGTAAGTTTTAT-------------------------TTT--------------A-----TTAAA--------------------A------------------------AA----TATAAA----------TATA------------T--G------TTAAT--T-------AAT-T------TG-TAATGTTTT-------------------CCTGCAGGATCCGAGTGGCCATCCCCATTGGCAAAAATAAGCCCGTGGCCGC---------CG	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..CACCTACTTGGATCTGGTGCGCA..............................................................................................................................................................................................................................................................................................................	23	1	4.00	4	3	0	0	0	1	0
..CACCTACTTGGATCTGGTGCGCAGC............................................................................................................................................................................................................................................................................................................	25	1	3.00	3	2	0	0	0	1	0
..CACCTACTTGGATCTGGT...................................................................................................................................................................................................................................................................................................................	18	1	3.00	3	1	2	0	0	0	0
.........................................................................................................................................................................................................................................................................................................AAAATAAGCCCGTGGCCGC---------CG	21	1	1.00	1	1	0	0	0	0	0
.......ACTTGGATCTGGTGCGCAGCAA..........................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.................GGTGCGCAGCAAATTGACAGAA................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
....................GCGCAGCAAATTGACAGAAATCAC...........................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................GATCCGAGTGGCCATCCCCATTGGCA..............................	26	1	1.00	1	0	1	0	0	0	0
...............................TGACAGAAATCACCGACAAG....................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
..........TGGATCTGGTGCGCAGCAAATTGAC....................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................ATCCCCATTGGCAAAAATAAGCCC...................	24	1	1.00	1	0	1	0	0	0	0
....CCTACTTGGATCTGGTGCGC...............................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
.........TTGGATCTGGTGCGCAGCAAAT........................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
.....CTACTTGGATCTGGTGCGCA..............................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0
......TACTTGGATCTGGTGCGCAGC............................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................CATCCCCATTGGCAAAAATAAGCCCG..................	26	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................GATCCGAGTGGCCATCCC......................................	18	1	1.00	1	1	0	0	0	0	0
GACACCTACTTGGATCTGGT...................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0
.............................ATTGACAGAAATCACCGACAAGAT..................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
GACACCTACTTGGATCTGGC...................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
............GATCTGGTGCGCAGCAAATTGAC....................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
..CACCTACTTGGATCTGGTGCGC...............................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0
.............ATCTGGTGCGCAGCAAATTGAC....................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
...ACCTACTTGGATCTGGTGCGCA..............................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
.............ATCTGGTGCGCAGCAAATTGACA...................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................GATCCGAGTGGCCATCCCCATTGGCAAA............................	28	1	1.00	1	0	1	0	0	0	0
......TACTTGGATCTGGTGCGCAGCA...........................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
.....CTACTTGGATCTGGTGCGC...............................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
.............................ATTGACAGAAATCACCGACA......................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
......TACTTGGATCTGGTGCGCAGCAAATT.......................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1
...ACCTACTTGGATCTGGTGCG................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
....CCTACTTGGATCTGGTGCGCAGC............................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
........................AGCAAATTGACAGAAATCACCGA........................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
.........................GCAAATTGACAGAAATCACC..........................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
.....CTACTTGGATCTGGTGCGCAGC............................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................ATCCGAGTGGCCATCCCCA....................................	19	1	1.00	1	0	0	0	0	0	1
.......ACTTGGATCTGGTGCGCAGC............................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1

droBip1

GACACCTACTTGGATTTGGTGCGCAGCAAATTGACAGAAATCACCGACAAGTATGTTTTGA-------------------------TTA----------TTAT----------------T--TATAAAAATATTT------------------------AT----AATTAT----------AATA----------------------------------------TTTA-------TAA--TTCT-------------------CCTACAGGATCCGAGTGGCCATCCCCATTGGCAAGAATAAGCCCGTGGCCGC---------CG	Size	Hit Count	Total Norm	Total
No Reads

dp5

GACACCTACTTGGACCTGGTGCGCAGCAAATTGACAGAGATCACCGACAAGTGAGTGTGGA-------------------------GTG----A-----GCCC-----CC-A-GGGAGA--A--------CAGAA------------------------AA----TATA-------------------------------A------CAA-------------AATCTCT---TT------CTTT-------------------TCCGTAGGATCCGAGTGGCCATCCCCATTGGCAACAAGAAGCCCGTGGCTGCTGC------CG	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..CACCTACTTGGACCTGGTGCGCA..............................................................................................................................................................................................................................................................................................................	23	1	3.00	3	0	2	1	0	0	0	0	0	0	0
...ACCTACTTGGACCTGGTGCGCAGC............................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	1	0	0	0	0	0	0	0	1
........................................................................................................................................................................................................................................................................................................AACAAGAAGCCCGTGGCTGCTGC------C.	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0
............................AATTGACAGAGATCACCGACA......................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	1	0	0	0	1	0	0	0	0
.........................GCAAATTGACAGAGATCACC..........................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..CACCTACTTGGACCTGGTGCGC...............................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..................GTGCGCAGCAAATTGACAGAG................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....CCTACTTGGACCTGGTGCGCAG.............................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................GCAGCAAATTGACAGAGATCACC..........................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0
........................AGCAAATTGACAGAGATCACCGACAA.....................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....CTACTTGGACCTGGTGCGC...............................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................AAATTGACAGAGATCACCGAC.......................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................AATTGACAGAGATCACCGACAAG....................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................GGCAACAAGAAGCCCGTGGCTGCT..........	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......ACTTGGACCTGGTGCGCAG.............................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................CAACAAGAAGCCCGTGGCTGCTGC------..	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................CAACAAGAAGCCCGTGGCTGCTGC------C.	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..CACCTACTTGGACCTGGTGCGCAGC............................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
GACACCTACTTGGACCTG.....................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................ACAAGAAGCCCGTGGCTGCTGC------..	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..CACCTACTTGGACCTGGTGC.................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................ATTGACAGAGATCACCGAC.......................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................GTGGCCATCCCCATTGGC...............................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................AACAAGAAGCCCGTGGCTGCT..........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................CAAATTGACAGAGATCACCGACAAG....................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................CATCCCCATTGGCAACAAG.........................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......TACTTGGACCTGGTGCGCAGCA...........................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1	0	0	0	0
.............................ATTGACAGAGATCACCGACAAG....................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.ACACCTACTTGGACCTGGTGCGCA..............................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

GACACCTACTTGGACCTGGTGCGCAGCAAATTGACAGAGATCACCGACAAGTGAGTGTGGA-------------------------GTG----A-----GCCC-----CC-A-GGGAGA--A--------CAGAA------------------------AA----TATA-------------------------------A------CAA-------------AATCTCT---TT------CCTT-------------------TCCGTAGGATCCGAGTGGCCATCCCCATTGGCAACAAGAAGCCCGTGGCTGCTGC------CG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.........................GCAAATTGACAGAGATCACCGAC.......................................................................................................................................................................................................................................................................................	23	1	5.00	5	5	0	0	0	0	0
.............................ATTGACAGAGATCACCGAC.......................................................................................................................................................................................................................................................................................	19	1	2.00	2	2	0	0	0	0	0
...........................AAATTGACAGAGATCACCGAC.......................................................................................................................................................................................................................................................................................	21	1	2.00	2	1	0	1	0	0	0
.........................GCAAATTGACAGAGATCACC..........................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	1	0	0	1
..CACCTACTTGGACCTGGTGCGCA..............................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	2	0	0	0	0
....................................................................................................................................................................................................................................................................................GAGTGGCCATCCCCATTG.................................	18	1	1.00	1	0	1	0	0	0	0
.........................GCAAATTGACAGAGATCACCGACAAG....................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.....CTACTTGGACCTGGTGCGCA..............................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
...........................AAATTGACAGAGATCACCG.........................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................CAACAAGAAGCCCGTGGCTG............	20	1	1.00	1	0	1	0	0	0	0
..CACCTACTTGGACCTGGT...................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
...ACCTACTTGGACCTGGTGCGC...............................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
..........................CAAATTGACAGAGATCACCGACAA.....................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0
.......ACTTGGACCTGGTGCGCAGCA...........................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................................GATCCGAGTGGCCATCCC......................................	18	1	1.00	1	0	0	1	0	0	0
.............................ATTGACAGAGATCACCGACA......................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
...........................AAATTGACAGAGATCACCGACAAGA...................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0

droWil2

GATACCTACTTGGATTTGGTGCGCAGCAAATTGACTGAAATTACCGATAAGTAAGATCAAT-------------------------A---------------T----------------T--TATTTATATATAT-------------------------------AGAGA----------GATT----------T-GTTG------CTAATATCATGTTTTAAT-CTTT---CA-------TTT-------------------TGTTTAGAATCCGAGTGGCAATTCCCATTGGCAACAAGAAGCCGGTAGCTGCTGCCGCCACTG	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
........................................................................................................................................................................................................................................................................................................AACAAGAAGCCGGTAGCTGC...........	20	1	3.00	3	1	0	2	0	0
GATACCTACTTGGATTTGGT...................................................................................................................................................................................................................................................................................................................	20	1	3.00	3	0	0	2	1	0
.......................................................................................................................................................................................................................................................................................................CAACAAGAAGCCGGTAGCTGCT..........	22	1	2.00	2	0	0	2	0	0
......................................................................................................................................................................................................................................................................................................GCAACAAGAAGCCGGTAGCTGC...........	22	1	2.00	2	0	0	1	1	0
..........................................................................................................................................................................................................................................................................................................CAAGAAGCCGGTAGCTGCTGC........	21	1	2.00	2	0	0	2	0	0
.......................................................................................................................................................................................................................................................................................................CAACAAGAAGCCGGTAGCTGC...........	21	1	1.00	1	0	0	1	0	0
....................................................................................................................................................................................................................................................................................................................GTAGCTGCTGCCGCCACTG	19	1	1.00	1	0	0	0	1	0
GATACCTACTTGGATTTGGTGCGCAGCA...........................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	1	0
.....................................................................................................................................................................................................................................................................................................GGCAACAAGAAGCCGGTAGCTGCTG.........	25	1	1.00	1	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................GCAACAAGAAGCCGGTAGCTGCT..........	23	1	1.00	1	0	0	0	1	0
..TACCTACTTGGATTTGGT...................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................AAGAAGCCGGTAGCTGCTGC........	20	1	1.00	1	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................ATTGGCAACAAGAAGCCGGTAGCTGCT..........	27	1	1.00	1	0	0	0	1	0
............................................................................................................................................................................................................................................................................................ATTCCCATTGGCAACAAGAAGC.....................	22	1	1.00	1	0	0	0	1	0
...............TTGGTGCGCAGCAAATTGACTGA.................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................AGAAGCCGGTAGCTGCTGCCGC.....	22	1	1.00	1	0	0	1	0	0
...........................................................................................................................................................................................................................................................................................AATTCCCATTGGCAACAAGA........................	20	1	1.00	1	0	0	0	1	0
.................GGTGCGCAGCAAATTGACTGAAAT..............................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................CAAGAAGCCGGTAGCTGC...........	18	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................AATTCCCATTGGCAACAAG.........................	19	1	1.00	1	0	0	0	1	0
......TACTTGGATTTGGTGCGCA..............................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1
..............TTTGGTGCGCAGCAAATTGACT...................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0
....................................................................................................................................................................................................................................................................................GAGTGGCAATTCCCATTGGCA..............................	21	1	1.00	1	0	1	0	0	0
.ATACCTACTTGGATTTGGTGCGCAGC............................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
........................................................................................................................................................................................................................................................................................................AACAAGAAGCCGGTAGCTGCTGCCGCCA...	28	1	1.00	1	0	0	0	1	0
....................GCGCAGCAAATTGACTGAAATTAC...........................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0
........CTTGGATTTGGTGCGCAGCAAATTGACT...................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................AACAAGAAGCCGGTAGCTGCT..........	21	1	1.00	1	0	0	0	1	0
........CTTGGATTTGGTGCGCAGC............................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1
....................GCGCAGCAAATTGACTGAAATTACC..........................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................AACAAGAAGCCGGTAGCTGCTGCCGCC....	27	1	1.00	1	0	0	1	0	0
....................................................................................................................................................................................................................................................................................................TGGCAACAAGAAGCCGGTAGCTGCT..........	25	1	1.00	1	0	0	0	1	0
....CCTACTTGGATTTGGTGCGC...............................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
...........................AAATTGACTGAAATTACCGAT.......................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0
......................................................................................................................................................................................................................................................................................................GCAACAAGAAGCCGGTAGCT.............	20	1	1.00	1	0	0	0	1	0

droVir3

GACACCTATTTGGATCTGGTGCGCAACAAGTTGACGGAAATCACCGACAAGTAGGAATCAC-------------------------ATA--------------A-----CCAAAT--------------------------------------------GC----CATAGG----------TTCA------------A--C------CTA-------------AACTGAT---GA-------TTTTTCCCTACCTTCATTTATTCCCACAGAATCCGGGTGGCTCTACCCATTGGCAACAAGAAGCCTGTGGCTGCTGCTGCTGCCG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.....CTATTTGGATCTGGTGCGC...............................................................................................................................................................................................................................................................................................................	19	1	5.00	5	1	0	0	1	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................TGGCTCTACCCATTGGCAACAAGA........................	24	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............ATCTGGTGCGCAACAAGTTGACGGAA................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................AATCCGGGTGGCTCTACC......................................	18	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................AACAAGTTGACGGAAATCACC..........................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...ACCTATTTGGATCTGGTGCGC...............................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
........................................................................................................................................................................................................................................................................................................AACAAGAAGCCTGTGGCTGCT..........	21	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
......................GCAACAAGTTGACGGAAATCACCGAC.......................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................GGCTCTACCCATTGGCAACAAGA........................	23	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
......................................................................................................................................................................................................................................................................................GTGGCTCTACCCATTGGCAAC............................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................ACCCATTGGCAACAAGAAGCCTGT.................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................AGCCTGTGGCTGCTGCTGCTGC..	22	2	1.00	2	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CACCTATTTGGATCTGGT...................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......TATTTGGATCTGGTGCGCAAC............................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................ACAAGTTGACGGAAATCACCGAC.......................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.........................ACAAGTTGACGGAAATCAC...........................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................CTACCCATTGGCAACAAGAAG......................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............CTGGTGCGCAACAAGTTG......................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CACCTATTTGGATCTGGTGCGCA..............................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................TGCGCAACAAGTTGACGGAAATCAC...........................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............GATCTGGTGCGCAACAAGTT.......................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................AACAAGTTGACGGAAATCACCGA........................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................GTGCGCAACAAGTTGACGGA.................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
........TTTGGATCTGGTGCGCAAC............................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..........................CAAGTTGACGGAAATCACCGACAAGT...................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................GTGGCTCTACCCATTGGC...............................	18	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................GTGCGCAACAAGTTGACGGAA................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.................................................................................................................................................................................................................................................................................TCCGGGTGGCTCTACCCATTGGCA..............................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................ATCCGGGTGGCTCTACCCATTGGCA..............................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...ACCTATTTGGATCTGGTGCGCAACA...........................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GACACCTATTTGGATCTGGT...................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................AATCCGGGTGGCTCTACCCATTGGC...............................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................AGAAGCCTGTGGCTGCTGCTGC.....	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................AACAAGAAGCCTGTGGCTGCTGCT.......	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.......ATTTGGATCTGGTGCGCA..............................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................TGGCTCTACCCATTGGCAACA...........................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................GGTGCGCAACAAGTTGACGG..................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTAGGAATCAC-------------------------ATA--------------A-----CCA.......................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....CCTATTTGGATCTGGTGCGCAACAA..........................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................GCTCTACCCATTGGCAACAAGA........................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....CCTATTTGGATCTGGTGCGC...............................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...ACCTATTTGGATCTGGTGCGCAACAAGT........................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...........................AAGTTGACGGAAATCACCGAC.......................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CACCTATTTGGATCTGGTGC.................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...ACCTATTTGGATCTGGTGCGCAAC............................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GACACCTATTTGGATCTGGTGCGC...............................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................GCAACAAGTTGACGGAAATCACC..........................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....CTATTTGGATCTGGTGCGCA..............................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CACCTATTTGGATCTGGTGCGCAACAAGT........................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.......................CAACAAGTTGACGGAAATCACC..........................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................AGTTGACGGAAATCACCGACA......................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................AATCACCGACAAGTAGGAATC............................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......ATTTGGATCTGGTGCGCAACAAGTTGA.....................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CACCTATTTGGATCTGGTGCGCAACA...........................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................AACAAGTTGACGGAAATCAC...........................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............ATCTGGTGCGCAACAAGTTGACGGA.................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................TGGTGCGCAACAAGTTGACGGAA................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................GTGGCTCTACCCATTGGCAACAAGA........................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......TATTTGGATCTGGTGCGCAACA...........................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

GATACCTATTTGGATCTGGTGCGCAACAAGTTGACAGAGATTACCGACAAGTGAGATATAC-------------------------CAGCTAT------A--C----------------A--TATATATATATAT------------------------ATAGTCGA---A----------GA--------------T--G------TTA-------------AT-CTGT---TT-------ATG-------------------CTTTCAGAATCCGGGTAGCTCTGCCCATTGGCAACAAGAAGCCAGTCGCCGCCGC------CG	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...............CTGGTGCGCAACAAGTTGACAGA.................................................................................................................................................................................................................................................................................................	23	1	2.00	2	2	0	0	0	0	0
.ATACCTATTTGGATCTGGTGCGC...............................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
.............................GTTGACAGAGATTACCGACAAAAT..................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................CTGCCCATTGGCAACAAGAAGC.....................	22	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................TCTGCCCATTGGCAACAAGAAGCC....................	24	1	1.00	1	0	0	0	0	1	0
............................AGTTGACAGAGATTACCGACAAAAT..................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0
............GATCTGGTGCGCAACAAGTTGACAGA.................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................AGAAGCCAGTCGCCGCCGC------CG	21	1	1.00	1	1	0	0	0	0	0
..............TCTGGTGCGCAACAAGTTGACAGA.................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
......TATTTGGATCTGGTGCGCA..............................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
...ACCTATTTGGATCTGGTGCGC...............................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................CCGGGTAGCTCTGCCCATTGGCAAC............................	25	1	1.00	1	1	0	0	0	0	0
GATACCTATTTGGATCTGGTGC.................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.................GGTGCGCAACAAGTTGACAGA.................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
.....................CGCAACAAGTTGACAGAGATTACCGAC.......................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	1
..................................................GTGAGATATAC-------------------------CAGCTAT------A--C----------------A--.............................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
..................GTGCGCAACAAGTTGACAGA.................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
......TATTTGGATCTGGTGCGCAACA...........................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
GATACCTATTTGGATCTGGTG..................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................AACAAGAAGCCAGTCGCCGC...........	20	1	1.00	1	0	0	0	0	0	1
............................AGTTGACAGAGATTACCGACAAA....................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0
..................GTGCGCAACAAGTTGACAGAGATTAC...........................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1

droGri2

GATACCTATTTGGATCTGGTGCGCACCAAGTTGACAGAAATCACCGATAAGTAAGCATCTACTTTATATATATTGGCATTTTTAGCACT-----TTCGAATCC-TTGTTC-A-AATTCA--A--------CACAACAAATTCGCATTAATTGCAAAAATGC----CATTGTCTTAAAAAGAGCTCATCTTTTACTTGGTTGTATTAACTATTAT--TGTTTTTTT-CTTTT--AA-------TTT-------------------CTTCTAGAATTCGGGTGGCCATTCCCATTGGCA---AGAAGCCTGTCGCCGCTGC---TACCG	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
.......ATTTGGATCTGGTGCGCAC.............................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1
............GATCTGGTGCGCACCAAGTTGACAGAA................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0
.....CTATTTGGATCTGGTGCGCA..............................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0
.......................................................................................................................................................................................................................................................................................................CA---AGAAGCCTGTCGCCGC...........	18	1	1.00	1	1	0

dsi_3340

2l:4807585-4807645 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-1.9	-1.4	-1.2