ID:

dsi_3299

 Coordinate:

2l:21853130-21853279 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.1 -21.1 -20.9

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+
mature
  1. 2l:21370623-21370647 +
  2. 2l:21813016-21813040 -
  3. dsi_3299  2l:21853205-21853229 +
  4. 2r:147805-147829 +
  5. 2r:3207299-3207323 -
  6. 3l:22584023-22584047 -
  7. dsi_439  3l:22794136-22794160 -
star

Sense Strand Reads

TCCAACGCCCACAAACCGTCCAAAACTGGCACGCCCACAACTAAGATCAATAAAATTTATTTTTTCCCAATTTTTACTGATATTCCTGAAAAATGTTGAAAATTCCCGGTCCCACTTGCACTAGCTGATTAACGGGTATCTGATAGTCGGGTAACTCGACTATAGCGTTCTTTCTTGTTTTAACCATATTTTACGTTTAGATGAGTCAAAAAGATAACAGCCCAGGACTCTCTCGAGCGATTGATCAAAT
**************************************************...........(((((...((((((...((...))...))))))...)))))..((((.........((....)).......))))......(((((((((...)))))))))(((((........((....))........)))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 M025
embryo
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M023
head
 SRR553488
RT_0-2 hours eggs
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 O002
Head
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
.............................................................................................................................TGATTAACGGGTATCTGATAGTCGG.................................................................................................... 25 0 7 1.86 13 13 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGATTAACGGGTATCTGATAGTCGGG................................................................................................... 26 0 4 1.00 4 4 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................ACTCGACTATAGCGTTCTTTCTTGT........................................................................ 25 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CCCAGGACTCTCTCGAGCGATTGATC.... 26 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TGTTTTAACCATATTTTACGTTTAGA................................................. 26 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
...........GAAACCGTCCAAAACTGG............................................................................................................................................................................................................................. 18 1 4 0.50 2 0 0 0 0 0 2 0 0 0 0 0 0
............................................................................................................................................................................................TTTTACGTTTAGATGAGTCAAAAAGA.................................... 26 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................GCACTAGCTGATTAACGGGT................................................................................................................. 20 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................AGGACTCTCTCGAGCGATTGA...... 21 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................TGATTAACGGGTATCTGATAGTC...................................................................................................... 23 0 10 0.40 4 4 0 0 0 0 0 0 0 0 0 0 0
..........ACAAACCGTCCAAAACTG.............................................................................................................................................................................................................................. 18 0 8 0.38 3 0 0 0 0 0 0 0 0 0 3 0 0
............................................................................................................................................................................................................GTCGAAAAGGGAACAGCCCAGG........................ 22 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGATTAACGGGTATCTGATAGT....................................................................................................... 22 0 10 0.30 3 0 0 0 0 1 0 0 0 2 0 0 0
.............................................................................................................................TGATTAACGGGTATCTGATAGTCG..................................................................................................... 24 0 9 0.22 2 0 0 0 0 2 0 0 0 0 0 0 0
..........CGAAACCGTCCAAAACTGG............................................................................................................................................................................................................................. 19 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................TGATTAACGGGTATCTGATAGTCGGAT.................................................................................................. 27 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................CACTAGCTGATTAACGGGTATCTGA........................................................................................................... 25 0 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................CGGGTAACTCGACTATAG..................................................................................... 18 0 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................AACGGGTATCTGATAGTCGGG................................................................................................... 21 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................GGGTATCTGATAGTCGGGTAA................................................................................................ 21 0 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................TATCTGATAGTCGGGTAACTCGA........................................................................................... 23 0 8 0.13 1 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................AACGGGTATCTGATAGTCGGGT.................................................................................................. 22 0 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................TAGCTGATTAACGGGTATCTGATAGT....................................................................................................... 26 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TAGCTGATTAACGGGTATCTGAT.......................................................................................................... 23 0 9 0.11 1 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................TATCTGATAGCCGGGTAACTCGAC.......................................................................................... 24 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................ATACATTTAGAGGAGTCAAAA....................................... 21 3 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................................TAACTGGTATCTGATAGTCGGGTAA................................................................................................ 25 1 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................TAACGGGTATCTGATAGTCGGG................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................GGGTATCTGATAGTCGGG................................................................................................... 18 0 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0
........................................................................................................................................TATCTGATAGTCGGGTAACTCGAT.......................................................................................... 24 1 15 0.07 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................CTGATTAACGGGTATCTG............................................................................................................ 18 0 15 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................TGATTAACGGGTATCTGATAGTA...................................................................................................... 23 1 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
............AAACCGTCCAAAACTGACA........................................................................................................................................................................................................................... 19 1 17 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................GATTAACGGGTATCTG............................................................................................................ 16 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................TGATTAACGGGTATCTGATAGTCGGGA.................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................AACGGGTATCTGATAGT....................................................................................................... 17 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................................ATCTGATAGTCGGGTAAATC............................................................................................. 20 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................CGGGACTCTCTCGAGA............ 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

AGGTTGCGGGTGTTTGGCAGGTTTTGACCGTGCGGGTGTTGATTCTAGTTATTTTAAATAAAAAAGGGTTAAAAATGACTATAAGGACTTTTTACAACTTTTAAGGGCCAGGGTGAACGTGATCGACTAATTGCCCATAGACTATCAGCCCATTGAGCTGATATCGCAAGAAAGAACAAAATTGGTATAAAATGCAAATCTACTCAGTTTTTCTATTGTCGGGTCCTGAGAGAGCTCGCTAACTAGTTTA
**************************************************...........(((((...((((((...((...))...))))))...)))))..((((.........((....)).......))))......(((((((((...)))))))))(((((........((....))........)))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
.......................................................................................................................TGATCGACTAATTGCCCATAGACT........................................................................................................... 24 0 8 1.00 8 6 0 0 0 2 0
........................................................................................................................................................................................................................TGTCGGGACCTGAGAGAGCAC............. 21 2 2 0.50 1 0 1 0 0 0 0
...............................ACGGGTGTTGATTCTAGTTATTTTAAAT............................................................................................................................................................................................... 28 1 2 0.50 1 0 0 0 1 0 0
...........................................................................................................................................................................................................TCAGTTTTTCTATTGTA.............................. 17 1 3 0.33 1 1 0 0 0 0 0
...................................................TTTTAAATTAAAAAGGACTAAAAAT.............................................................................................................................................................................. 25 3 3 0.33 1 0 0 1 0 0 0
...............................................................CAGGCTTAAAAATGACTGTAA...................................................................................................................................................................... 21 3 7 0.29 2 0 2 0 0 0 0
...TTGCGGGTGTTTGGCAGGTT................................................................................................................................................................................................................................... 20 0 5 0.20 1 0 0 0 0 1 0
.........................................................................................TTTTACAAGTTTTAAGAGCCAGGGT........................................................................................................................................ 25 2 14 0.14 2 0 0 2 0 0 0
.............................................................................................................................................................................................................AGTTTTTCTAGTGTCTGG........................... 18 2 7 0.14 1 0 0 0 0 0 1
...............................................................................................................................TAATTGCCCATAGACTATCAGCTCAT................................................................................................. 26 1 7 0.14 1 0 0 1 0 0 0
...................................CTGTTGATTCTAGTT........................................................................................................................................................................................................ 15 1 14 0.07 1 0 0 1 0 0 0
........................................................................................TTTTTACAAGTTTTAAGAGCCAGGGT........................................................................................................................................ 26 2 14 0.07 1 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:21853080-21853329 + dsi_3299 TCCAACGCCCACAAACCGTCC-AAA-------ACTGGC--ACGCCCACA---------------------------------------------------ACTAA--GATCAATAAAATT----------------------TATTTTTTCCCAATTTTTAC-----------TG-------------------------------------------------------------------------ATATTCCTGAAAAATGTTGAAAATTCCCGGTCCCACTTGCACTA-----------------------------GCTGATTAACGGGTATCTGATAGTCGGGT-AACTCGACTATAG-CGTTCTTTCTTGTTTTAAC-CATATTTTACGTT-------------TAGATGAGTC----------A--AAAAGATAACAGCC---CAGGACTCTCTCGAGCGAT--TG---ATCAAAT
droSec2 scaffold_41:210211-210423 - CA--------------------------------------------------------------------------------------------------ACTAA--GATCAATAAAATT----------------------TATTTTTTCCCAATTTTTAC-----------TG-------------------------------------------------------------------------ATATTCCTGAAAAATGTTGAAAATTCTCGGTCCCACTTGCACTA-----------------------------GCTGATTAACGGGTATCTCATAGTCGGGT-AACTCGACTATAG-CGTTCTCTCTTGTTTTAAC-CATATTATACGTT-------------TAGATGAGTC----------A--AAAAGATAACAGCC---CAGGACTCTCTCGAGCGAT--TG---ATCAAAT
dm3 chr3L:23322449-23322698 - TCTAACGCCCACAAACCGTCC-AAA-------ACTGGC--ACGCCCACA---------------------------------------------------ACTAA--GATCAATAAAATT----------------------AATTTTTTCCAAATTTCTAC-----------AG-------------------------------------------------------------------------ATATTCCTGAAATAAGTTGAATATTCTTGGTCCCACTTGCACAA-----------------------------GCTGATTAATGGGTATCTGATAGTCGGGT-AACGCGACTATAG-CGTTCTCTCTTCTTTTAAT-CATATTTTACGTT-------------TAGATGAGTC----------A--AAAAGATAACAGCC---CAGGACTCTCTCGAGCGAT--TG---ATCAAAT
droEre2 scaffold_4690:15139876-15140158 + TCTAACGCACACAAACCGCAC-GAA-------ACTCTC--ACGCCCACACTT--------------------------------TTAAAAA---------ATTTG--TAA------GAT--------TTTTTTCATATTCTTACTTTTTTCCCAATTTCTAC-----------CG-------------------------------------------------------------------------ATATTCCAGAA-AATGTTGAAATTACTCGTTTGCACTTCCACTA-----------------------------GCTAAATAACTGGTATCTGATAGTTGGGG-AACTCGACTATAG-CATTCTATGTTGTTTTCAT-GTGTTTTCAATTT------------GCAGAACAGCCGCCGGTCATTAAAAAAACGTCAGAGCT---GTGTATTTGTACAATATAT--TGCGTATCAAAT
droYak3 4:1211203-1211461 - TGTAACGCCCACAAATTGATAAAAA-------GCTGTC--ATGCCCACGCTT--------------------------------ACCAAAAATTTTGTGA-------------TTTAATT----------------------ATTTTCTCACCCATTTCTATCGATTTACCAA------------------------------------------------------------------------------------A--AATTTCAAAATGTCTACTTCGCACTGCCGCCA-----------------------------GCTGGGTATCGGGTATTTGATATTCGAGA-AACTCCACTATAG-CATTCTGTCTTTTTTTATT-ATTATTTTAGATT-------------TCAGTTAGGT----TTAATCT------TAAAAATGCC---AAGACCAGTTTTGTGCAAT--AG---AAGAAAG
droEug1 scf7180000409760:375649-375902 + TCTAACGCCCACAAGCCGCGA-AAA-------ACTGTG--GCGTTCATAT------------------------------------------------------------TATTATAATG----------------------AATGTCT-------ATCTATCGATTTACCAA--AGATTTTTACAATCGGACAATTTTTAACAAAAGGTGGCGC--------------------------TTTC----------------------------------TCCATTTCCACTAGCAAATGAATACTGTAGAACTGTG-----AAACAGTAACGGGTATGGTATAGACGCGG-TACTCGACTATAG-CGTTTCTTCTTGTTTTCTT-TTTATTTCAT-----------------TAATTATTT----------A--AATATTTAGCAGCG---AAGG-----------------------------
droBia1 scf7180000301518:47296-47540 + TCTAACGCCCACAAACGGATTAAACGCTTAAATCTGTCTGCCGCTCACAT--------------------------------------GGCATCTACTGA-------------AGTAGGC----------------------GTT-------------------------------------------------------------AGGTGGCGCCCTAAAATATCGCATTGCTGGTTATATATCTCC-----------------------ATTTCTCATTTGCTACCTTAA-----------------------------GCTGAGAAATGGGTATCTGATAGTCGAGG-CACTCGACTATAG-CGTTCCTTCTTGTTTA--------TTTTACTTT-------------TAAGCAAGTC----------T--A--AGCCATCAACT--------TTATCTCG---AGT--TG---ACAAAAC
droTak1 scf7180000415076:1706-1971 + C-TAACGCCCACAATCCCTTA-AAAATTTAAATATT--------TCGGA---------------------------------------------------AAATA----------------------------GAAATGTAGAAG------------------------------AAATTTTTCAAATCGGACCATTCGTTTAAAAGTTATGCGT-------------GATCAAAGTTTTCTATCTCC-----------------------ATCTCCCTCGCACTCCCTTTA-----------------------------GCTGAGTAACGGGTATCTGATAGTCGGGG-CACCCGACTATAA-CGTTCTCTCTTGTTAAAAT-AAGAATTGGAGA--CATTAA--TTTTTGTAACTGTC----------G--AAGGATAAACATCC---CATCACATTTTGAAGCGGT--TG----------
droEle1 scf7180000491104:974146-974329 + TCTAACGCCCACTAATGGCAA-AAG-------TCTGTC--ACGACACTGCGA------------------------------------GACATATAGA--GTGC----------TGCACGATCTTAACTTCTAGTGTTGGGGATGCAGTT--------------------CGA---------------------------------------------------------------------------------------CAGTTTGGGAATATTTAGTTTGGAATTTGTGA-----------------------------GCTGAGTAACGAGTATCTAATAGTCGAGG-AACTCGGCTATAG-CGTTCATTCTAGATT--------------------------------------------------------------------------------------------------------
droRho1 scf7180000778209:4368-4652 + TCTAACGCCCAAAAACCCATTAAACGCTTAAGCCTGGCTAGCGCCTACATTTCCGCCTTTCATGGCGCCATCTAACGGATGATTTTAGAAC---------AGCTGGCCAA------GGT--------GCTCAACAGAGTCAACGTTAATTCTCGATAAGGAT-----------TT-------------------------------------------------------------------------C--------------------------------TATTAAAGGAA-----------------------------ACGGAGTAACGGGTATCTAATAGTCGAGG-CACTCGACTATAG-CGATTTCTCTTGTTAAAAC-TGAGATAATAGT-----------TCGCGTAGAAACA----------G--ACAGACGGACATGCTTATATCAACTCAGGACGCGATCCTG---ATCAA--
droFic1 scf7180000453912:1180646-1180719 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------ACTGAGTAATGGGTATCTTATATTTGAGT-AACTCGACTATAG-CGTTCTTTCCTGTCTTATT-TTTATTTGAAGT---------------------------------------------------------------------------------------
droKik1 scf7180000302650:311650-311729 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGTCGGGA-CACGCAACTATAT-TATTCCTGCTTGTTTTGTT-TCTGTTTGGC-----------------AGACAGGCC----------A--A--AGGCCACAGCT---AAGGAC---------------------------
droAna3 scaffold_13082:3611524-3611607 + TTTTTTTTATATAAATCATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--------A--------------------------------------------------------------------ATATTTT-------------AAGATGACCC----------A--AAAAGATAACAGCC---CTGGACTTGTCCGTGCAAT--TG---ATCAAAT
droBip1 scf7180000396209:21530-21603 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------GATGAGTATCGGGTATAATATAGTCGGGA-AACTCGACTATAGACGTCCTTTCTTGTTTAGAT-C-TATTTTATGT---------------------------------------------------------------------------------------
dp5 4_group3:6179151-6179228 - TTTTCGATCCACCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAACA--------------------TC--------TGTGTTACCAGGTATCCCGTTGTCGAGC-CACTCGACCACCG-ACTGCTCTCTTGTT---------------------------------------------------------------------------------------------------------
droPer2 scaffold_3:980503-980557 - TTCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAAGTC----------A--AAAAGACAACAGCC---CCGGACTGGTTCGTGCGAT--TG---ACCAAAT
droWil2 scf2_1100000004902:6041644-6041695 + AG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGAC----------A--AAAAGACAATACCC---CAGGACTGGATCGTGCAAT--TG---ATCAAAT
droVir3 scaffold_12958:974260-974389 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGTATCCCCTAGTCGGGAGCTCCCGACTAGAA-CC-TCTTACTTGTTTTATACTATATTTAACAA-ACATATTTTATTTAAGATGGGTC----------A--AAAAGATAACAGCC---CCGCTCTAGATCGTGCCAT--TG---ATCAAAT
droMoj3 scaffold_6540:451296-451482 + TATGGCGACTACAAACTTTTA--AT-------TTAGAT--TCATATATA---------------------------------------------------ATTAA--TAT------AAT--------ATTATTTTTTTTTTTTTTTAATTCACAATTTTTAT-----------TG-------------------------------------------------------------------------TAATTTTTGAAATAT---------------------------CA--------------------GT--TGCTCGAAGGGTCCAGGGGATCTCGTAGTCGAGCAGTCTCGACTAAAG-CTTTATTTCTTGTTTAAAT-CATGACTTACCTA-------------TA-----------------------------------------------------------------------
droGri2 scaffold_15126:4774649-4774753 - TTTGCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGTTTTAGAATATAT---------------------TTAACA-----------------------------GCTGGTTTCAGGGTAAATCGTAGTCGAGCTCACTCGACTACAG-CACTCTTACTTGCTTTGCA-AAGACTTTAAGCT--------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCCAACGCCCACAAACCGTCC-AAA-------ACTGGC--ACGCCCACA---------------------------------------------------ACTAA--GATCAATAAAATT----------------------TATTTTTTCCCAATTTTTAC-----------TG-------------------------------------------------------------------------ATATTCCTGAAAAATGTTGAAAATTCCCGGTCCCACTTGCACTA-----------------------------GCTGATTAACGGGTATCTGATAGTCGGGT-AACTCGACTATAG-CGTTCTTTCTTGTTTTAAC-CATATTTTACGTT-------------TAGATGAGTC----------A--AAAAGATAACAGCC---CAGGACTCTCTCGAGCGAT--TG---ATCAAATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................TGATTAACGGGTATCTGATAGTCGG........................................................................................................................................2571.8613000000000000130000
...................................................................................................................................................................................................................................................................................................................................TGATTAACGGGTATCTGATAGTCGGG.......................................................................................................................................2641.00400000000000040000
................................................................................................................................................................................................................................................................................................................................................................ACTCGACTATAG-CGTTCTTTCTTGT..........................................................................................................2520.50100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CC---CAGGACTCTCTCGAGCGAT--TG---ATC....2620.50101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TGTTTTAAC-CATATTTTACGTT-------------TAGA.....................................................................2620.50100000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TTTTACGTT-------------TAGATGAGTC----------A--AAAAGA............................................2620.50100000001000000000
..............................................................................................................................................................................................................................................................................................GCACTA-----------------------------GCTGATTAACGGGT.....................................................................................................................................................2020.50100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACTCTCTCGAGCGAT--TG---A......2120.50100010000000000000
...................................................................................................................................................................................................................................................................................................................................TGATTAACGGGTATCTGATAGTC..........................................................................................................................................23100.40400000000000040000
..........ACAAACCGTCC-AAA-------ACTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................1880.38300000300000000000
...................................................................................................................................................................................................................................................................................................................................TGATTAACGGGTATCTGATAGT...........................................................................................................................................22100.30300000020001000000
...................................................................................................................................................................................................................................................................................................................................TGATTAACGGGTATCTGATAGTCG.........................................................................................................................................2490.22200000000002000000
...............................................................................................................................................................................................................................................................................................CACTA-----------------------------GCTGATTAACGGGTATCTGA...............................................................................................................................................2560.17100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................CGGGT-AACTCGACTATAG-.......................................................................................................................1860.17100010000000000000
........................................................................................................................................................................................................................................................................................................................................AACGGGTATCTGATAGTCGGG.......................................................................................................................................21200.15300000000000030000
...........................................................................................................................................................................................................................................................................................................................................GGGTATCTGATAGTCGGGT-AA...................................................................................................................................2170.14100000001000000000
..............................................................................................................................................................................................................................................................................................................................................TATCTGATAGTCGGGT-AACTCGA..............................................................................................................................2380.13100000010000000000
........................................................................................................................................................................................................................................................................................................................................AACGGGTATCTGATAGTCGGGT-.....................................................................................................................................2280.13100000000000001000
..................................................................................................................................................................................................................................................................................................TA-----------------------------GCTGATTAACGGGTATCTGATAGT...........................................................................................................................................2680.13100000000000010000
..................................................................................................................................................................................................................................................................................................TA-----------------------------GCTGATTAACGGGTATCTGAT..............................................................................................................................................2390.11100000000010000000
.......................................................................................................................................................................................................................................................................................................................................TAACGGGTATCTGATAGTCGGG.......................................................................................................................................22200.10200000000000020000
...........................................................................................................................................................................................................................................................................................................................................GGGTATCTGATAGTCGGG.......................................................................................................................................18200.10200000000002000000
..............................................................................................................................................................................................................................................................................................................................................TATCTGATAGTCGGGT-AACTCGAT.............................................................................................................................24150.07100000000010000000
..................................................................................................................................................................................................................................................................................................................................CTGATTAACGGGTATCTG................................................................................................................................................18150.07100000000001000000
...................................................................................................................................................................................................................................................................................................................................TGATTAACGGGTATCTGATAGTA..........................................................................................................................................23160.06100000000000010000
....................................................................................................................................................................................................................................................................................................................................GATTAACGGGTATCTG................................................................................................................................................16200.05100000000001000000
...................................................................................................................................................................................................................................................................................................................................TGATTAACGGGTATCTGATAGTCGGGA-.....................................................................................................................................27200.05100000000000010000
........................................................................................................................................................................................................................................................................................................................................AACGGGTATCTGATAGT...........................................................................................................................................17200.05100000010000000000
droSec2
CA--------------------------------------------------------------------------------------------------ACTAA--GATCAATAAAATT----------------------TATTTTTTCCCAATTTTTAC-----------TG-------------------------------------------------------------------------ATATTCCTGAAAAATGTTGAAAATTCTCGGTCCCACTTGCACTA-----------------------------GCTGATTAACGGGTATCTCATAGTCGGGT-AACTCGACTATAG-CGTTCTCTCTTGTTTTAAC-CATATTATACGTT-------------TAGATGAGTC----------A--AAAAGATAACAGCC---CAGGACTCTCTCGAGCGAT--TG---ATCAAATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CC---CAGGACTCTCTCGAGCGAT--............2111.0010100
................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTC----------A--AAAAGATAACAGC.....................................1911.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CC---CAGGACTCTCTCGAGCGAT--T...........2211.0010010
..................................................................................................................................................................................................................................................................................................................................................................TCGACTATAG-CGTTCTCTCTTG...........................................................................................................22150.1320101
.................................................................................................................................................................................................................................................................................................................................................................CTCGACTATAG-CGTTCTCTCTTG...........................................................................................................2390.1110001
..................................................................................................................................................................................................................................................................................................................................................................TCGACTATAG-CGTTCTCTCTTGT..........................................................................................................23150.0710001
...................................................................................................................................................................................................................................................................................................................................................................CGACTATAG-CGTTCTCTCTTGT..........................................................................................................22160.0610001
....................................................................................................................................................................................................................................................................................................................................................................GACTATAG-CGTTCTCTCTTGT..........................................................................................................21170.0610001
dm3
TCTAACGCCCACAAACCGTCC-AAA-------ACTGGC--ACGCCCACA---------------------------------------------------ACTAA--GATCAATAAAATT----------------------AATTTTTTCCAAATTTCTAC-----------AG-------------------------------------------------------------------------ATATTCCTGAAATAAGTTGAATATTCTTGGTCCCACTTGCACAA-----------------------------GCTGATTAATGGGTATCTGATAGTCGGGT-AACGCGACTATAG-CGTTCTCTCTTCTTTTAAT-CATATTTTACGTT-------------TAGATGAGTC----------A--AAAAGATAACAGCC---CAGGACTCTCTCGAGCGAT--TG---ATCAAATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGCC---CAGGACTCTCTCGAGC.................24135.003500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000034
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACTCTCTCGAGCGAT--TG---AT.....2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACTCTCTCGAGCGAT--TG---ATC....2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTTTAAT-CATATTTTACGTT-------------TAG......................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCC---CAGGACTCTCTCGAGCGAT--............2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000
...........................................................................................................................................................................................................................................................................AATATTCTTGGTCCCACTTG.....................................................................................................................................................................................................2012.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCC---CAGGACTCTCTCGAGCGAT--TG---.......2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCC---CAGGACTCTCTCGAGC.................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GTC----------A--AAAAGATAACAGCC---CAGGAC...........................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GGTATCTGATAGTCGGGT-AAC..................................................................................................................................2151.6080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCC---CAGGACTCTCTCGAGCGAT--TG---ATCA...2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TCTTTTAAT-CATATTTTACGTT-------------TAGA.....................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCTCGAGCGAT--TG---AT.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
........................................................................................................................................................................................................................................................................................................................................AATGGGTATCTGATAGTCGGGT-AA...................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCC---CAGGACTCTCTCGAGCGAT--TG---.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TCTTTTAAT-CATATTTTACGTT-------------TAG......................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................A--AAAAGATAACAGCC---CAGGA............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCC---CAGGACTCTCTCGAGCG................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCC---CAGGACTCTCTCGAGCGAT--............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CC---CAGGACTCTCTCGAGCGAT--TG---ATCA...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCC---CAGGACTCTCTCGAGCGAT--T...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................A--AAAAGATAACAGCC---CAGGACTCTCT......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCTCTCGAGCGAT--TG---ATC....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TGGGTATCTGATAGTCGGGT-AACGCGAC.............................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACTCTCTCGAGCGAT--TG---.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TATTTTACGTT-------------TAGATGAGTC----------.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAACAGCC---CAGGACTCTCTCGAGCGA...............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTC----------A--AAAAGATAACAGCC---CAGGACT..........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TATTTTACGTT-------------TAGATGAGTC----------A--AAAAGA............................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGGTCCCACTTGCACAA-----------------------------GC.................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................A--AAAAGATAACAGCC---CAGG.............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACTCTCTCGAGCGAT--TG---ATCAAA.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATAACAGCC---CAGGACT..........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCC---CAGGACTCTCTCGAGCGAT--TG---.......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCC---CAGGACTCTCTCGAGCGAT--T...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................TGATAGTCGGGT-AACGCGACT............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................T-------------TAGATGAGTC----------A--AAAAGATAACAGC.....................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CC---CAGGACTCTCTCGAGCGA...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTAAT-CATATTTTACGTT-------------TAGAA....................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCC---CAGGACTCTCTCGAGCG................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GGTATCTGATAGTCGGGT-AACGCGAC.............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTCTCTCGAGCGAT--TG---ATC....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................CTTTTAAT-CATATTTTACGTT-------------TAGC.....................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CGCGACTATAG-CGTTCTCTCTTCTTT........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACTCTCTCGAGCGAT--TG---ATC....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................ATAG-CGTTCTCTCTTCTTTTAAT-CATA...............................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........ACAAACCGTCC-AAA-------ACTGGC--T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCC---CAGGACTCTCTCGAGCGAT--............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................ATTCCTGAAATAAGTTGAATA.....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCTCGAGCGAT--TG---ATC....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................CTTTTAAT-CATATTTTACGTT-------------TAG......................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACTCTCTCGAGCGAT--TG---ATCA...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTAAT-CATATTTTACGTT-------------TAGA.....................................................................2211.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GGGTATCTGATAGTCGGGT-.....................................................................................................................................19100.9090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GTATCTGATAGTCGGGT-AAC..................................................................................................................................2070.7150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GCTGATTAATGGGTATCTGATA.............................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................GACTATAG-CGTTCTCTCTTCT..........................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................AATGGGTATCTGATAGTCGGG.......................................................................................................................................21190.3770000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000200000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000100100000
...........................................................................................................................................................................................................................................................................................................................................GGGTATCTGATAGTCGGGT-AA...................................................................................................................................2160.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GGTATCTGATAGTCGGGT-A....................................................................................................................................19110.2730000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GGGTATCTGATAGTCGGGT-AAC..................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GGGTATCTGATAGTCGGGT-A....................................................................................................................................2080.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GGGTATCTGATAGTCGGG.......................................................................................................................................18200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TAATGGGTATCTGATAGTCGG........................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................TAATGGGTATCTGATAGTCGGG.......................................................................................................................................22190.1630000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TATCTGATAGTCGGGT-AA...................................................................................................................................18110.0910000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CGACTATAG-CGTTCTCTCT.............................................................................................................19150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................ATGGGTATCTGATAGTCGGG.......................................................................................................................................20190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
droEre2
TCTAACGCACACAAACCGCAC-GAA-------ACTCTC--ACGCCCACACTT--------------------------------TTAAAAA---------ATTTG--TAA------GAT--------TTTTTTCATATTCTTACTTTTTTCCCAATTTCTAC-----------CG-------------------------------------------------------------------------ATATTCCAGAA-AATGTTGAAATTACTCGTTTGCACTTCCACTA-----------------------------GCTAAATAACTGGTATCTGATAGTTGGGG-AACTCGACTATAG-CATTCTATGTTGTTTTCAT-GTGTTTTCAATTT------------GCAGAACAGCCGCCGGTCATTAAAAAAACGTCAGAGCT---GTGTATTTGTACAATATAT--TGCGTATCAAATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................TGCACTTCCACTA-----------------------------GCTAAT.............................................................................................................................................................19190.0511000000
droYak3
TGTAACGCCCACAAATTGATAAAAA-------GCTGTC--ATGCCCACGCTT--------------------------------ACCAAAAATTTTGTGA-------------TTTAATT----------------------ATTTTCTCACCCATTTCTATCGATTTACCAA------------------------------------------------------------------------------------A--AATTTCAAAATGTCTACTTCGCACTGCCGCCA-----------------------------GCTGGGTATCGGGTATTTGATATTCGAGA-AACTCCACTATAG-CATTCTGTCTTTTTTTATT-ATTATTTTAGATT-------------TCAGTTAGGT----TTAATCT------TAAAAATGCC---AAGACCAGTTTTGTGCAAT--AG---AAGAAAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
TCTAACGCCCACAAGCCGCGA-AAA-------ACTGTG--GCGTTCATAT------------------------------------------------------------TATTATAATG----------------------AATGTCT-------ATCTATCGATTTACCAA--AGATTTTTACAATCGGACAATTTTTAACAAAAGGTGGCGC--------------------------TTTC----------------------------------TCCATTTCCACTAGCAAATGAATACTGTAGAACTGTG-----AAACAGTAACGGGTATGGTATAGACGCGG-TACTCGACTATAG-CGTTTCTTCTTGTTTTCTT-TTTATTTCAT-----------------TAATTATTT----------A--AATATTTAGCAGCG---AAGG-----------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TCTAACGCCCACAAACGGATTAAACGCTTAAATCTGTCTGCCGCTCACAT--------------------------------------GGCATCTACTGA-------------AGTAGGC----------------------GTT-------------------------------------------------------------AGGTGGCGCCCTAAAATATCGCATTGCTGGTTATATATCTCC-----------------------ATTTCTCATTTGCTACCTTAA-----------------------------GCTGAGAAATGGGTATCTGATAGTCGAGG-CACTCGACTATAG-CGTTCCTTCTTGTTTA--------TTTTACTTT-------------TAAGCAAGTC----------T--A--AGCCATCAACT--------TTATCTCG---AGT--TG---ACAAAACSizeHit CountTotal NormTotal
No Reads
droTak1
C-TAACGCCCACAATCCCTTA-AAAATTTAAATATT--------TCGGA---------------------------------------------------AAATA----------------------------GAAATGTAGAAG------------------------------AAATTTTTCAAATCGGACCATTCGTTTAAAAGTTATGCGT-------------GATCAAAGTTTTCTATCTCC-----------------------ATCTCCCTCGCACTCCCTTTA-----------------------------GCTGAGTAACGGGTATCTGATAGTCGGGG-CACCCGACTATAA-CGTTCTCTCTTGTTAAAAT-AAGAATTGGAGA--CATTAA--TTTTTGTAACTGTC----------G--AAGGATAAACATCC---CATCACATTTTGAAGCGGT--TG----------SizeHit CountTotal NormTotal
No Reads
droEle1
TCTAACGCCCACTAATGGCAA-AAG-------TCTGTC--ACGACACTGCGA------------------------------------GACATATAGA--GTGC----------TGCACGATCTTAACTTCTAGTGTTGGGGATGCAGTT--------------------CGA---------------------------------------------------------------------------------------CAGTTTGGGAATATTTAGTTTGGAATTTGTGA-----------------------------GCTGAGTAACGAGTATCTAATAGTCGAGG-AACTCGGCTATAG-CGTTCATTCTAGATT--------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TCTAACGCCCAAAAACCCATTAAACGCTTAAGCCTGGCTAGCGCCTACATTTCCGCCTTTCATGGCGCCATCTAACGGATGATTTTAGAAC---------AGCTGGCCAA------GGT--------GCTCAACAGAGTCAACGTTAATTCTCGATAAGGAT-----------TT-------------------------------------------------------------------------C--------------------------------TATTAAAGGAA-----------------------------ACGGAGTAACGGGTATCTAATAGTCGAGG-CACTCGACTATAG-CGATTTCTCTTGTTAAAAC-TGAGATAATAGT-----------TCGCGTAGAAACA----------G--ACAGACGGACATGCTTATATCAACTCAGGACGCGATCCTG---ATCAA--SizeHit CountTotal NormTotal
No Reads
droFic1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------ACTGAGTAATGGGTATCTTATATTTGAGT-AACTCGACTATAG-CGTTCTTTCCTGTCTTATT-TTTATTTGAAGT---------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGTCGGGA-CACGCAACTATAT-TATTCCTGCTTGTTTTGTT-TCTGTTTGGC-----------------AGACAGGCC----------A--A--AGGCCACAGCT---AAGGAC---------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TTTTTTTTATATAAATCATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--------A--------------------------------------------------------------------ATATTTT-------------AAGATGACCC----------A--AAAAGATAACAGCC---CTGGACTTGTCCGTGCAAT--TG---ATCAAATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGACTTGTCCGTGCAAT--T...........2011.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CC---CTGGACTTGTCCGTGCAAT--T...........2211.001100000
droBip1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------GATGAGTATCGGGTATAATATAGTCGGGA-AACTCGACTATAGACGTCCTTTCTTGTTTAGAT-C-TATTTTATGT---------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
TTTTCGATCCACCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAACA--------------------TC--------TGTGTTACCAGGTATCCCGTTGTCGAGC-CACTCGACCACCG-ACTGCTCTCTTGTT---------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TTCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAAGTC----------A--AAAAGACAACAGCC---CCGGACTGGTTCGTGCGAT--TG---ACCAAATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACAACAGCC---CCGGACTGGTTC.....................2312.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCC---CCGGACTGGTTCGTGC.................2211.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCC---CCGGACTGGTTCGTGC.................1911.001100000
droWil2
AG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGGAC----------A--AAAAGACAATACCC---CAGGACTGGATCGTGCAAT--TG---ATCAAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACCC---CAGGACTGGATCGTGCA................2411.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCC---CAGGACTGGATC.....................1811.00110000
droVir3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGTATCCCCTAGTCGGGAGCTCCCGACTAGAA-CC-TCTTACTTGTTTTATACTATATTTAACAA-ACATATTTTATTTAAGATGGGTC----------A--AAAAGATAACAGCC---CCGCTCTAGATCGTGCCAT--TG---ATCAAATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................A--AAAAGATAACAGCC---CCGCTCTAG........................2411.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................A--AAAAGATAACAGCC---CCGCTCTA.........................2311.001000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTAGATCGTGCCAT--T...........1811.001000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CCGACTAGAA-CC-TCTTACTT............................................................................................................20200.051000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GCTCCCGACTAGAA-CC-TCTTACT.............................................................................................................23200.051000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................................................................................................................................................................................................................................................ATCCCCTAGTCGGGAGCTCCCGA..............................................................................................................................23200.051000000000000001000000000000000000000000000000000000000000000000
droMoj3
TATGGCGACTACAAACTTTTA--AT-------TTAGAT--TCATATATA---------------------------------------------------ATTAA--TAT------AAT--------ATTATTTTTTTTTTTTTTTAATTCACAATTTTTAT-----------TG-------------------------------------------------------------------------TAATTTTTGAAATAT---------------------------CA--------------------GT--TGCTCGAAGGGTCCAGGGGATCTCGTAGTCGAGCAGTCTCGACTAAAG-CTTTATTTCTTGTTTAAAT-CATGACTTACCTA-------------TA-----------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................TGAAATAT---------------------------CA--------------------GT--TGCTCGAAGGGT............................................................................................................................................................24201.15232210000
...............................................................................................................................................................................................................................................................TGAAATAT---------------------------CA--------------------GT--TGCTCGAAGGGTC...........................................................................................................................................................2520.501000010
..............................................................................................................................................................................................................................................................TTGAAATAT---------------------------CA--------------------GT--TGCTCGAAGGGTC...........................................................................................................................................................2620.501000010
.........................................................................................................................................................................................................................................................................................................................T--TGCTCGAAGGGTCCAGGGGA....................................................................................................................................................2140.502100100
................................................................................................................................................................................................................................................................................................................................CGAAGGGTCCAGGGGATCTCG...............................................................................................................................................2150.402200000
............................................................................................................................................................................................................................................................................................................................TGCTCGAAGGGTCCAGGGGATC..................................................................................................................................................2240.251001000
............................................................................................................................................................................................................................................................................................................................TGCTCGAAGGGTCCAGGGGAT...................................................................................................................................................2140.251000100
..............................................................................................................................................................................................................................................................................................................................CTCGAAGGGTCCAGGGGATCTC................................................................................................................................................2240.251100000
...............................................................................................................................................................................................................................................................................................................................TCGAAGGGTCCAGGGGATCT.................................................................................................................................................2050.201100000
...............................................................................................................................................................................................................................................................................................................................TCGAAGGGTCCAGGGGATCTC................................................................................................................................................2150.201000001
........................................................................................................................................................................................................................................................................................................................................CCAGGGGATCTCGTAGTCGAG.......................................................................................................................................21100.202100001
.........................................................................................................................................................................................................................................................................................................................T--TGCTCGAAGGGTCCAGGGGT....................................................................................................................................................2170.141100000
................................................................................................................................................................................................................................................................GAAATAT---------------------------CA--------------------GT--TGCTCGAAGGG.............................................................................................................................................................22200.102000020
.......................................................................................................................................................................................................................................................................................................................................TCCAGGGGATCTCGTAGTCGA........................................................................................................................................21100.101000001
.........................................................................................................................................................................................................................................................................................................................................CAGGGGATCTCGTAGTCGAGCAGTCTC................................................................................................................................27200.051000010
..................................................................................................................................................................................................................................................................................................................................................TCGTAGTCGAGCAGTCTCGA..............................................................................................................................20200.051100000
..................................................................................................................................................................................................................................................................AATAT---------------------------CA--------------------GT--TGCTCGAAGGGT............................................................................................................................................................21200.051000001
...............................................................................................................................................................................................................................................................TGAAATAT---------------------------CA--------------------GT--TGCTCGAA................................................................................................................................................................20200.051000010
droGri2
TTTGCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGTTTTAGAATATAT---------------------TTAACA-----------------------------GCTGGTTTCAGGGTAAATCGTAGTCGAGCTCACTCGACTACAG-CACTCTTACTTGCTTTGCA-AAGACTTTAAGCT--------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:23 AM