ID:

dsi_3273

 Coordinate:

x:19913853-19914002 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.4

Flybase annnotation

exon [x_19913714_19913852_-]; CDS [x_19913714_19913852_-]; intron [x_19913853_19914395_-]

Repeatable elements

NameClassFamilyStrand
Hoyak2DNAhAT-Ac-
DNAREP1_DMRCHelitron-
mature
  1. 2l:21352031-21352053 -
  2. 2l:23161679-23161701 -
  3. dsi_2059  2r:992041-992063 -
  4. dsi_4413  2r:3195062-3195084 -
  5. 2r:3243142-3243164 -
  6. 2r:3701458-3701480 -
  7. 3l:23061633-23061655 -
  8. 3r:64593-64615 -
  9. 3r:454044-454066 -
  10. 4:904873-904895 -
  11. x:17923496-17923518 -
  12. x:18147481-18147503 -
  13. x:19784474-19784496 -
  14. x:19893855-19893877 -
  15. dsi_3273  x:19913934-19913956 -
  16. x:20493192-20493214 -
  17. x:20717549-20717571 -
  18. x:20789838-20789860 -
  19. node_36773:866-888 -
  20. node_4651:3017-3039 -
  21. 2l:20902561-20902583 +
  22. 2l:20987844-20987866 +
  23. 2l:21096566-21096588 +
  24. 2l:21332488-21332510 +
  25. 2l:21756937-21756959 +
  26. 2l:21855991-21856013 +
  27. 2l:23037359-23037381 +
  28. 2r:1807812-1807834 +
  29. 3l:17880754-17880776 +
  30. 3l:18363811-18363833 +
  31. 3l:22470040-22470062 +
  32. 3l:22484307-22484329 +
  33. 3l:23073329-23073351 +
  34. 3l:23680539-23680561 +
  35. 3l:23711944-23711966 +
  36. 3l:23813548-23813570 +
  37. 4:167351-167373 +
  38. x:46090-46112 +
  39. dsi_27652  x:19732954-19732976 +
  40. x:20545101-20545123 +
  41. 2r:2561881-2561903 +
  42. x:18875684-18875706 +
  43. 2l:20747677-20747699 +
  44. 2l:20960029-20960051 +
  45. 2l:22612883-22612905 +
  46. 2l:22733811-22733833 +
  47. 2r:2436472-2436494 +
  48. 3l:23809620-23809642 +
  49. x:3395955-3395977 +
  50. x:15253623-15253645 +
  51. 2l:22171016-22171038 -
  52. 2l:22177724-22177746 -
  53. 2l:22605111-22605133 -
  54. 2l:22729558-22729580 -
  55. dsi_27449  2l:23528726-23528748 -
  56. 2r:240696-240718 -
  57. 2r:323356-323378 -
  58. 2r:1309131-1309153 -
  59. 2r:1558245-1558267 -
  60. dsi_28180  2r:2030334-2030356 -
  61. 3l:19646537-19646559 -
  62. 3l:22791352-22791374 -
  63. 4:30581-30603 -
  64. x:16871520-16871542 -
  65. x:19481441-19481463 -
  66. x:20157983-20158005 -
  67. x:20772811-20772833 -
  68. node_22030:7638-7660 -
  69. node_7313:15800-15822 -
  70. node_45722:3685-3707 -
star

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATTTTTTTTTTTTCATATAATTTTTTTTTTCCGATTTTGACCGATATTTAAAAAAATATTGAAATTTCTTGTTTACGCATACAGCTGAGTAACGGGTATCTGATAGTCGGGGAACTCGACTATAGAATTCTCTCTTGTTTTTATATCGTTTTCGTAAATTAAATTTCGTAAAACTAAGCTTCTTTTTCGGTCCTCTCCAGTTGACACTTTCTTCAAGTGGGCTGCTCCGGGGATCTTACCCCCTATTTTG
************************************************************************************************..((((.((((((((...)))))))))))).......((((.((((((...((((.........))))...)))))).))))............************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M053
female body
 GSM343915
embryo
 M024
male body		 M025
embryo
 SRR902008
ovaries
 M023
head
 SRR902009
testis
........................................................................TTTAGCATACAGCTGAGTAACGGGTA........................................................................................................................................................ 26 2 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................TATCTGATAGTCGGGGAACTCGA................................................................................................................................... 23 0 20 1.65 33 0 33 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TTCAAGTGGGCTGCTCCGGGG.................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................TACAGCTGAGTAACGGGTATCTGA................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................GTTTACGCATACAGCTGAGTAACGGG.......................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................TCGACTATAGAATTCTCTCTTGCTTTT............................................................................................................ 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAGCTTCTTTTTCGG............................................................ 15 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................TTTCTTGTTTACGCATACAGCTGA.................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................TATCGTTTTCGTAAATTAAATTTCGTA................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGAGTAACGGGTATCTGATAGTCGGGGA......................................................................................................................................... 28 0 20 0.85 17 17 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................ACTCGACTATAGAATTCTCTCTTG................................................................................................................. 24 0 4 0.75 3 0 0 0 0 0 0 0 3 0 0 0 0
............................................................................GCAGACGGCTGAGTAACGCGT......................................................................................................................................................... 21 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................GGGGAACTCGACTATAGAATTCTGT..................................................................................................................... 25 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................GAACTCGATTATAGAATTCTCTCTTGTT............................................................................................................... 28 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................ACTCGACTATAGAATTCTCTCT................................................................................................................... 22 0 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................ACTCGACTATAGAATTCTCTCTTGT................................................................................................................ 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGAGTAACGGGTATCTG.................................................................................................................................................... 17 0 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0
.....................................................................................TGAGTAACGGGTATCTGATA................................................................................................................................................. 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TCTGATAGTCGGGGAACTCGACT................................................................................................................................. 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................GGAACTCGACTATAAAATTCTTTC.................................................................................................................... 24 2 20 0.10 2 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................CGACTATAGAATTCTCTC.................................................................................................................... 18 0 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................GGAACACGACTAAAGAATTCTCTC.................................................................................................................... 24 2 11 0.09 1 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................ACTCGACTATAGAATTCT....................................................................................................................... 18 0 12 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................ATAGAATTCTCTCTTGT................................................................................................................ 17 0 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................CCGAGATTTAAAAAAA.................................................................................................................................................................................................. 16 1 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................TCGACTATAGAATTCTCT..................................................................................................................... 18 0 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................CAGCTGAGTAACGGGTATCTGA................................................................................................................................................... 22 0 15 0.07 1 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................CAGCTGAGTAACGGGTATCTGATA................................................................................................................................................. 24 0 15 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................GGAACTCGACTATAGAATTCTGTTT................................................................................................................... 25 2 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................AGCTGAGTAACGGGTATCT..................................................................................................................................................... 19 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................CGGGTATCTGATAGTCGGGGAACTCG.................................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................GTAACGGGTATCTGATAGTCGGGGAACT...................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGAGTAACGGGTATCTGAAAGTCGGG........................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................TGAGTAACGGGTATCTGATAGTCGG............................................................................................................................................ 25 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................TCTGATAGTCGGGGAACTCGA................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................AGTAACGGGTATCTGATAGTCGGGGA......................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TAACGGGTATCTGATAGTCGGGGAA........................................................................................................................................ 25 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GGCTGGTACGGGGATC............... 16 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GGGTATCTGATAGTCGGGGAACTCGACT................................................................................................................................. 28 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................CTGAGTAACGGGTATCTGATAGTCGG............................................................................................................................................ 26 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................TGAGTAACGGGTATCTGATAGTCGGGG.......................................................................................................................................... 27 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................CGGGTATCTGATAGTCGGGGAAC....................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TAAAAAAAAAAAAGTATATTAAAAAAAAAAGGCTAAAACTGGCTATAAATTTTTTTATAACTTTAAAGAACAAATGCGTATGTCGACTCATTGCCCATAGACTATCAGCCCCTTGAGCTGATATCTTAAGAGAGAACAAAAATATAGCAAAAGCATTTAATTTAAAGCATTTTGATTCGAAGAAAAAGCCAGGAGAGGTCAACTGTGAAAGAAGTTCACCCGACGAGGCCCCTAGAATGGGGGATAAAAC
************************************************************..((((.((((((((...)))))))))))).......((((.((((((...((((.........))))...)))))).))))............************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR902008
ovaries
......................................................................CTAAATCGTATGTCGACTCATTGCC........................................................................................................................................................... 25 3 1 4.00 4 4 0 0 0 0 0 0
.....................................................................ACAAATGCGTATGTCGACTCATTGCC........................................................................................................................................................... 26 0 1 2.00 2 1 1 0 0 0 0 0
...............................................................................ATGTCGACTCATTGCCCATAGACT................................................................................................................................................... 24 0 1 2.00 2 1 0 1 0 0 0 0
.........................AAAAAGGCTAGATCTGGCT.............................................................................................................................................................................................................. 19 2 1 1.00 1 0 1 0 0 0 0 0
........................................................................AAATCGTATGTCGACTCATTGCCCA......................................................................................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
....................AAAAAAAAAAGGCTGAAACTGGCTATAAAGT....................................................................................................................................................................................................... 31 2 1 1.00 1 1 0 0 0 0 0 0
..................................................................AGAACAAATGCGTATGTCGACTCATTGCC........................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0
...........................AAAGGCTGAAACTGGCTATAAAGTTT..................................................................................................................................................................................................... 26 2 1 1.00 1 0 0 0 1 0 0 0
...................................AAACTGGCTATAAAGTTTTTCATAACT............................................................................................................................................................................................ 27 2 1 1.00 1 0 0 1 0 0 0 0
..........................................................................TGCGTATGTCGACTCATTGCC........................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
........................................................................AAATCGTATGTCGACTCATTGCCCAT........................................................................................................................................................ 26 2 1 1.00 1 0 0 1 0 0 0 0
..................................GAAACTGGCTATAAAGTTTTTCATAACT............................................................................................................................................................................................ 28 3 1 1.00 1 0 0 0 0 1 0 0
....................................................................AACAAATGCGTATGTCGACTC................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0
.................................TGAAACTGGCTATAAAGTTTTTCATAAC............................................................................................................................................................................................. 28 3 1 1.00 1 1 0 0 0 0 0 0
....................................AACTGGCTATAAAGTTTTTCATAACTTT.......................................................................................................................................................................................... 28 2 1 1.00 1 0 0 0 1 0 0 0
.......................................................................AAATGCGTATGTCGACTCATTGCCCA......................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................TGCCCATAGACTATCAGCCCCTTGAGCTG.................................................................................................................................. 29 0 20 0.45 9 1 8 0 0 0 0 0
.................................................................................................................................................................................................................................TGGCCCCTAGGATGG.......... 15 2 20 0.30 6 0 0 6 0 0 0 0
.AAAAAAAAAAAAGGATATT...................................................................................................................................................................................................................................... 19 1 5 0.20 1 1 0 0 0 0 0 0
....................AAAAAAAAAAGGCTAGAAAT.................................................................................................................................................................................................................. 20 2 10 0.20 2 0 0 0 0 0 2 0
......................AAAAAAAAGGCTAAA..................................................................................................................................................................................................................... 15 0 5 0.20 1 1 0 0 0 0 0 0
...................................................................................................................................................................................AAAAAAAGGCCTGGAGAGGT................................................... 20 3 8 0.13 1 0 0 1 0 0 0 0
........................................................................................................................................................................................AAAGCCAGGAGAGGTTG................................................. 17 2 11 0.09 1 0 1 0 0 0 0 0
........................AGAATAGGCTAAAACTGTCT.............................................................................................................................................................................................................. 20 3 14 0.07 1 0 0 0 0 0 1 0
...............................................................................................................................................................................................................................CTTGGCCCCTAGAATG........... 16 2 15 0.07 1 0 1 0 0 0 0 0
................................................................................TTTCGACTCATTGCCCATAGACTAT................................................................................................................................................. 25 1 16 0.06 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................AAATAAGCCAGGAGAGGTT.................................................. 19 3 18 0.06 1 0 0 0 1 0 0 0
.........................................................................................ATTGCCCATAGACTATCAGCCCCTT........................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0 0
...................................................................................CGACTCATTGCCCATAGACTA.................................................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0 0 0
....................................................................................GACTCATTGCCCATAG...................................................................................................................................................... 16 0 20 0.05 1 0 1 0 0 0 0 0
...............................................................................................CATAGACTATCAGCCCCTTGAGCTG.................................................................................................................................. 25 0 20 0.05 1 0 0 0 0 0 1 0
................................................................................TCTCAACTCATTGCCCATAGACT................................................................................................................................................... 23 2 20 0.05 1 0 0 0 0 1 0 0
.........................................................................................................................AATCTTGAGAGACAACAAAAA............................................................................................................ 21 3 20 0.05 1 0 0 0 0 0 0 1
..............................................................................................................................TAAGAGAGAACAAAA............................................................................................................. 15 0 20 0.05 1 0 1 0 0 0 0 0
..AAAAAAAATAAGTATAT....................................................................................................................................................................................................................................... 17 1 20 0.05 1 0 1 0 0 0 0 0
........................................GGATGTAAAATTTTTTATAAC............................................................................................................................................................................................. 21 3 20 0.05 1 0 0 1 0 0 0 0
..............................................................................................CCATAGACTATCAGCCCCTTGAGCTG.................................................................................................................................. 26 0 20 0.05 1 0 0 1 0 0 0 0
........AAAAAGTATATTGAAA.................................................................................................................................................................................................................................. 16 1 20 0.05 1 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:19913803-19914052 - dsi_3273 ATTTTT-------------------------------------------------------------TTTTTTTCATATAATTTT----TTTTTTCCGATTTTGACCGATA-TTTAAAAA---------------------------------------------------------------------------------------------------------------------------------------------AATATTGA-----AATT---------TCTTGTTTACGCAT---AC--------------------------AGCTGAGTAACGGGT----ATCTGA--TAGTCGGGGAACTCGACTATAGAATTC-TCTCTTGTTTTTATATCGT-----------------TTTCGTAAATTAAATTTCGTAAAACTAAGCTTCTT---TTT-----------CGGT--------------------------------------CCTCTCCAGTTGACACTTTCTTCAAGTGGGCTGCTCCGGGGATCTTA--CCCCCTATTTTG
droSec2 scaffold_8:3487720-3487966 - dse_1589 ATTTTT-------------------------------------------------------------TT---TTCATATAATTTT----T-TTTTTCAACTTTGACCGATA-TTT---------------------------------------------------CAAAAA-----------------------------------------------------------------------------------------AATATTCA-----AATT---------TCTTGTTTACGCAT---AC--------------------------AGCTGAGTAACGGGT----ATCTGA--TAGTCGGGGAACTCGACTATAGAATTC-TCTCTTGCTTTTATATCGT-----------------TTTCGTAAATTAAATTTCGTAAAACTAAGCTTCTT---TTT-----------CGGT--------------------------------------TCTCTCCAGTTGACACTTTCTTCAAGTGGGCTGCTCCGGGGATCTTA--CCCCCTATTTTG
dm3 chrX:21180447-21180750 - ATTTTT--TTGCACGCCCACAAACCACCTAAAACTGTCAAGCCCACACTTTTCAGTCCTTTTTAAATTTTTTTTCATATAATTTT----GTTTTCCCGATTTCGACCGATA-TTTCAAAA---------------------------------------------------------------------------------------------------------------------------------------------AGTATTGA-----AATT---------TCTTGTTCACACAA---GC--------------------------AGCTGAGAAACAGGAACATATCGAATCTAGTCGGGAAATTTGGTTAAAGCATTC-TCTCTTGTTTTTACATCGT-----------------TTTCGTAAATTAAATAT-----------GTTTCAC---TTT-----------TGGT--------------------------------------TTTCTCCAGTTGACACATTTTTCAAGTGGGCTGCTCCGGGTATCTTA--CCCCCTATTTTG
droEre2 scaffold_4929:13090481-13090722 - ATTTTT-------------------------------------------------------------TTTCATTTCAATCCTTTT----T-TTTCCCAATTTCTAGCGATA-TTCCAGAA---------------------------------------------------------------------------------------------------------------------------------------------AATGTTGA-----AATT---------TCTCCTTTGCACTTCCACT--------------------------AGCTGAGTAACGGGT----ATCTGA--TAGTCGGGGAACTCGACTATAGCATTC-TATCTTGCTTTAAACTTAT-----------------ATTTGCAGTTCGTGCTCTGAAAAATCGGGATTATC---TTT-----------AGGACCACACCATGTCCTTC----------------------TCTTT---------CCACGTCATCTGCCAA--TCTTCGAGGGTC-----------------
droYak3 2R:1365526-1365768 - TTTTAT-------------------------------------------------------------ATTTTTTTACATTTTTTT--A-G----------------------------------------------------TTTTGTAAATTTCTCTCGACTTGCCAAAAATATTTT----------------------------TACCACGCC---------------------------------------------------------------------------------CACTTTCACT--------------------------AGCTGAGTAACGGGT----ATCAAA--TAGTCGGGGAACTCGACTATAGCGTTC-TCTCTTGTTTTTGTTTTTA-----------------AGTTGATTT--ATTTA----------------TTGTTTTTATTTGCTTTTATTAAG--------------------------------------TTTATTCAGTTGACCTTTGTCTTCGGTCTG--TCTTCAAGAATCTTA--GTTTGTATCTTA
droEug1 scf7180000405680:392-589 - GCATAC-------------------------------------------------------------TC---A-----------------------------------------------------ACATACTTCCTCTTCCCCTTG---------------------------------------------------------------------------------------------------------------------------------------------------TGAATTCCCACTAGCAAAATAATATTTTAAAATTTTGTAAAACAGTAACGGGT----ATCTTA--TAGTCGCGGCACTCGACTATAGTGTTT-CCTCTTGTTTCTATTATTT-----------------TTTTTTACAAAAAA------AAAATCT-GCCTAGT---TTT--T--------GTAT--------------------------------------GGTTTTCAGGCCAC----ACTCCAATTGGGC------------------------------
droBia1 scf7180000302294:54410-54641 - ATATCG-------------------------------------------------------------CTT---------------------------------------------------------------------------------------------TGCTGAATATATATC----------------------------TCTTGCTCC--CTTT-----------------------------------------TTATATA-----TACC---------TTTT------GCTCCCTTA--------------------------AGCTGAGTAACGGGT----AGCTGA--TAGTCGAGGCACTTGACTTTAGCATTC-TTTTTTGTTAAT--TTTGTTTAAGTTTTTATAAT--ATTGTTTAATTGAATT---------TGAGAATATT--ATTT-----------CGTC--------------------------------------CATGTAGAGCTAACATTTTTTCCCTATATGTT-CTTTTGGGGTCTCA--CCCATTGCTT-T
droTak1 scf7180000413248:8091-8352 + GTTTTA--TTGT-----------------------------------------------------------------------------G-TTTATCAA----------------------------------------------------TACCTATCGAAATGTAGAAGAAATTTTTTAAATCGGACCATTCGTTAAAAAGTTA--CGG--------------------------------------------------CGGAT-CA-----AAGTTTTTCTCCATCTCTTTCGCACTCCCTTT--------------------------AGCTGAGTAACGGGT----ATCTGA--TAGTCGGGGCACCCGACTATAGCGTTC-TCTCTTGTTTCTCCTTATA-TA------------TATCTCCTTAATTCGATT-------ACAAAGATGATT---TTT-----------CAGT--------------------------------------TATAACCGGCGG-----T--------------TATACAAGTCTGCTG--CCTCCTGCCCCC
droEle1 scf7180000491104:1027097-1027317 + ATTGTTGCTTGT---------------------------------------------------------GC------------------G----------------------------------------------------CTTCGGTCATATCTATCGGTAGACCCAAACAATTTTTTAAATCGAGCCAC--------------------------CTTAGCTTGTTTTGT----------------------AGGAGAAATATTTA-----GGTT---------GG---------------GT--------------------------GACTGAGTAACGGGT----ATCTAA--TAGTCGGGGAACTTGACTATAGCGTTCCTTTTTTGTTTTT-TAAAGA-----------------ATAAATAAATAGATTACCATAAACAT----------------------------------------------------------------------------------------CTTTGGCCAGCTGC--------TTATG--CCGTCC-----T
droRho1 scf7180000762621:11507-11778 + CTTTTT-------------------------------------------------------------GTCTTT------------------------------------------------------------------TTTTCCTG----------------------------------------------------------------TGGTCACTATAATTCACATTATGTTAAAAAAAAAAAACAATACAAGAAGGCATATTTATATTAAGTT---------G---------------TTT--------------------------AGCTGAGTAACGGGT----ATCTAA--TAGTCGAGGCACTCGACTATAACGTTC-TCTCTTGTTTTTCTTTAAT-----------------ATTCGCATTTTATTTTT--------------------CTTTCTT-----------G-TATTTAAAGCAATC-TTTTTTAAAATGCCCTATCAGTAAAAAC--------TTTGATTTAAATTGGATTTTATCCTGAAACTTATTATATTTATGTTG
droFic1 scf7180000454086:33344-33436 + TAAT--------------------------------------------------------------------------------------------------------------TAAAAA---------------------------------------------------------------------------------AGTTT---------------------------------------------------------TGATGA-----AATT---------CC---------------TT--------------------------ATCCGAGTTACTGGT----ATCTGA--TAGTTGCGGCATTGGATTATAGCGTTC-TCTTTTGTTTTTAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302406:24578-24634 + TTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTTGACACATACTTTAAATGGGCTGCACCGGGAATTTTG--CCAGCTATGCTC
droAna3 scaffold_13334:1036999-1037110 + TTGTTT-------------------------------------------------------------ATA------AATAGTGTTTTATT-TACAATTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCTATTAACCTGG-----------TTTA--------------------------------------TCTATTTAGTTGATACCTACTTTAAATGGATGTCCCCGGGAATACTT--CCTGCTATTTTC
droBip1 scf7180000395111:18075-18236 + TTCATT-------------------------------------------------------------TCA--TTTTTATATTTTT----T-TGTAACATTTTAGGCTTACTACCCAAAAAAAATCAGCATGCTTTTAT-----------------------------------------------------------------------------------------------------------------------------------------------------ATTTGTTTAGGAAT---AA---------------------GTGGAAGATGAGAAACGGGT----ATTATA--AAGTCGGGAAACTCGACTATAGCTGTCCTTTCTGGTTTCTAAATTGT-----------------TT--------------------------------------------------------------------------------------------------------------------------------------------------------T
dp5 XL_group1a:9047493-9047561 + CTTTTG-------------------------------------------------------------TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--------------------------------------CCCCTTCAGTTCATTCATATTTCACTTGGAGTTCGCCTGGCATTATG--CCAGCCATTATC
droPer2 scaffold_15:1440180-1440250 + TCCCTT-------------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-----------TTTT--------------------------------------CCCCTTCAGTTCATTCATATTTCACTTGGAGTTCGCCTGGCATTATG--CCAGCCATTATC
droWil2 scf2_1100000004515:186610-186661 - A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACAACAGCTATTTCACGTGGGGAGATGCAGGAATATTG--CCACCGCTTACT
droVir3 scaffold_12970:7949413-7949469 - TCCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTTGATACCTACTTCAAATGGGCCGATCCTGGCATTTTA--CCGGCCTTAACA
droGri2 scaffold_15203:11119192-11119244 + C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTGAATCCTATTTCAAATGGGCTGATCCTGGTATCATG--CCGGGATTAACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATTTTT-------------------------------------------------------------TTTTTTTCATATAATTTT----TTTTTTCCGATTTTGACCGATA-TTTAAAAA---------------------------------------------------------------------------------------------------------------------------------------------AATATTGA-----AATT---------TCTTGTTTACGCAT---AC--------------------------AGCTGAGTAACGGGT----ATCTGA--TAGTCGGGGAACTCGACTATAGAATTC-TCTCTTGTTTTTATATCGT-----------------TTTCGTAAATTAAATTTCGTAAAACTAAGCTTCTT---TTT-----------CGGT--------------------------------------CCTCTCCAGTTGACACTTTCTTCAAGTGGGCTGCTCCGGGGATCTTA--CCCCCTATTTTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................T----ATCTGA--TAGTCGGGGAACTCGA...........................................................................................................................................................................................................23201.6533000000330000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAGTGGGCTGCTCCGGGG....................2111.00100000000000100000
............................................................................................................................................................................................................................................................................................................T---AC--------------------------AGCTGAGTAACGGGT----ATCTGA--...........................................................................................................................................................................................................................2411.00100000000010000000
...................................................................................................................................................................................................................................................................................................GTTTACGCAT---AC--------------------------AGCTGAGTAACGGG........................................................................................................................................................................................................................................2611.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCTTCTT---TTT-----------CGG....................................................................................................1511.00100000000001000000
....................................................................................................................................................................................................................................................................................TT---------TCTTGTTTACGCAT---AC--------------------------AGCTGA................................................................................................................................................................................................................................................2411.00100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TATCGT-----------------TTTCGTAAATTAAATTTCGTA......................................................................................................................................2711.00100000000100000000
...............................................................................................................................................................................................................................................................................................................................................TGAGTAACGGGT----ATCTGA--TAGTCGGGGA.................................................................................................................................................................................................................28200.8517000000001700000000
.................................................................................................................................................................................................................................................................................................................................................................................ACTCGACTATAGAATTC-TCTCTTG........................................................................................................................................................................................2440.75303000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................ACTCGACTATAGAATTC-TCTCT..........................................................................................................................................................................................2240.25100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................ACTCGACTATAGAATTC-TCTCTTGT.......................................................................................................................................................................................2540.25100000000100000000
...............................................................................................................................................................................................................................................................................................................................................TGAGTAACGGGT----ATCTG..............................................................................................................................................................................................................................17200.10200000000002000000
...............................................................................................................................................................................................................................................................................................................................................TGAGTAACGGGT----ATCTGA--TA.........................................................................................................................................................................................................................20200.10200000000200000000
................................................................................................................................................................................................................................................................................................................................................................TCTGA--TAGTCGGGGAACTCGACT.........................................................................................................................................................................................................23200.10200000000200000000
....................................................................................................................................................................................................................................................................................................................................................................................CGACTATAGAATTC-TCTC...........................................................................................................................................................................................18110.09100000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................ACTCGACTATAGAATTC-T..............................................................................................................................................................................................18120.08110000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................ATAGAATTC-TCTCTTGT.......................................................................................................................................................................................17120.08100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................TCGACTATAGAATTC-TCT............................................................................................................................................................................................18140.07100000010000000000
.................................................................................................................................................................................................................................................................................................................C--------------------------AGCTGAGTAACGGGT----ATCTGA--...........................................................................................................................................................................................................................22150.07100000000000010000
.................................................................................................................................................................................................................................................................................................................C--------------------------AGCTGAGTAACGGGT----ATCTGA--TA.........................................................................................................................................................................................................................24150.07100000001000000000
............................................................................................................................................................................................................................................................................................................................................AGCTGAGTAACGGGT----ATCT...............................................................................................................................................................................................................................19200.05100000000001000000
......................................................................................................................................................................................................................................................................................................................................................CGGGT----ATCTGA--TAGTCGGGGAACTCG............................................................................................................................................................................................................26200.05100000000001000000
..................................................................................................................................................................................................................................................................................................................................................GTAACGGGT----ATCTGA--TAGTCGGGGAACT..............................................................................................................................................................................................................28200.05100000000100000000
...............................................................................................................................................................................................................................................................................................................................................TGAGTAACGGGT----ATCTGA--TAGTCGG....................................................................................................................................................................................................................25200.05100000000000001000
................................................................................................................................................................................................................................................................................................................................................................TCTGA--TAGTCGGGGAACTCGA...........................................................................................................................................................................................................21200.05110000000000000000
.................................................................................................................................................................................................................................................................................................................................................AGTAACGGGT----ATCTGA--TAGTCGGGGA.................................................................................................................................................................................................................26200.05100000000100000000
...................................................................................................................................................................................................................................................................................................................................................TAACGGGT----ATCTGA--TAGTCGGGGAA................................................................................................................................................................................................................25200.05100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................GGGT----ATCTGA--TAGTCGGGGAACTCGACT.........................................................................................................................................................................................................28200.05100000001000000000
..............................................................................................................................................................................................................................................................................................................................................CTGAGTAACGGGT----ATCTGA--TAGTCGG....................................................................................................................................................................................................................26200.05100000000001000000
...............................................................................................................................................................................................................................................................................................................................................TGAGTAACGGGT----ATCTGA--TAGTCGGGG..................................................................................................................................................................................................................27200.05100000000000001000
......................................................................................................................................................................................................................................................................................................................................................CGGGT----ATCTGA--TAGTCGGGGAAC...............................................................................................................................................................................................................23200.05100000000100000000
droSec2
ATTTTT-------------------------------------------------------------TT---TTCATATAATTTT----T-TTTTTCAACTTTGACCGATA-TTT---------------------------------------------------CAAAAA-----------------------------------------------------------------------------------------AATATTCA-----AATT---------TCTTGTTTACGCAT---AC--------------------------AGCTGAGTAACGGGT----ATCTGA--TAGTCGGGGAACTCGACTATAGAATTC-TCTCTTGCTTTTATATCGT-----------------TTTCGTAAATTAAATTTCGTAAAACTAAGCTTCTT---TTT-----------CGGT--------------------------------------TCTCTCCAGTTGACACTTTCTTCAAGTGGGCTGCTCCGGGGATCTTA--CCCCCTATTTTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................................................................................GT----ATCTGA--TAGTCGGGGAACTCGAC..........................................................................................................................................................................................................25200.0511000
.........................................................................................................................................................................................................................................................................................................................................................GT----ATCTGA--TAGTCGGGGAACTCGA...........................................................................................................................................................................................................24200.0511000
.................................................................................................................................................................................................................................................................................................................C--------------------------AGCTGAGTAACGGGT----ATCTG..............................................................................................................................................................................................................................21200.0510001
dm3
ATTTTT--TTGCACGCCCACAAACCACCTAAAACTGTCAAGCCCACACTTTTCAGTCCTTTTTAAATTTTTTTTCATATAATTTT----GTTTTCCCGATTTCGACCGATA-TTTCAAAA---------------------------------------------------------------------------------------------------------------------------------------------AGTATTGA-----AATT---------TCTTGTTCACACAA---GC--------------------------AGCTGAGAAACAGGAACATATCGAATCTAGTCGGGAAATTTGGTTAAAGCATTC-TCTCTTGTTTTTACATCGT-----------------TTTCGTAAATTAAATAT-----------GTTTCAC---TTT-----------TGGT--------------------------------------TTTCTCCAGTTGACACATTTTTCAAGTGGGCTGCTCCGGGTATCTTA--CCCCCTATTTTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTTTCAAGTGGGCTGCTCCGGG.....................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TATCGAATCTAGTCGGGAAATTTGGT..........................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................AATCTAGTCGGGAAATTTGGT..........................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCCGGGTATCTTA--CCCCCTATT...2513.0030000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................TCGAATCTAGTCGGGAAAT...............................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AGCTGAGAAACAGGAACATATCGAATCT..........................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................ATCGAATCTAGTCGGGAAATTTGGT..........................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT-----------TGGT--------------------------------------TTTCTCCAGTTGACACAT...........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AA---GC--------------------------AGCTGAGAAACAGGAACA....................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGGTATCTTA--CCCCCTATTTTG2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TGTTCACACAA---GC--------------------------AGCTGAGAA.............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGGCTGCTCCGGGTATC.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TCTAGTCGGGAAATTTGGTTAAAG.....................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TTGGTTAAAGCATTC-TCTCTTGTT......................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TAGTCGGGAAATTTGGTTAAA......................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................CCACACTTTTCAGTCCTTTTTAAATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................CACTTTTCAGTCCTTTTTAAATTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TCTCTTGTTTTTACATCGT-----------------TTTCGTA....................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCCAGTTGACACATTTTTCAAGT..................................2611.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TCCTTTTTAAATTTTTTTTCATATAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TCCCGATTTCGACCGATA-TTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTGACACATTTTTCAAGTGGGCT.............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TCATATAATTTT----GTTTTCCCGATTTCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAAGTGGGCTGCTCCGG......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACACATTTTTCAAGTGGGCTGC...........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TTTCAGTCCTTTTTAAATTTTTTTTCATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATTAAATAT-----------GTTTCAC---TTT-----------TGGT--------------------------------------.............................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TTT----GTTTTCCCGATTTCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TCGGGAAATTTGGTTAAAGCATTC-TC.............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TTTT----GTTTTCCCGATTTCGACCGATA-..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGGCTGCTCCGGGTATCT................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCTGCTCCGGGTATCTT...............1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................ACAGGAACATATCGAATCTAGTCGG....................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AACATATCGAATCTAGTCGGG...................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACACATTTTTCAAGTGGGCTG............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TT---------TCTTGTTCACACAA---GC--------------------------AGCTGA................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-----------GTTTCAC---TTT-----------TGGT--------------------------------------TTTCTCCA.....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAC---TTT-----------TGGT--------------------------------------TTTCTCCAGTTGA................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTC-TCTCTTGTTTTTACATCGT-----------------TTTCGT.....................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TTTT----GTTTTCCCGATTTCGACCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TTTCAGTCCTTTTTAAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....T--TTGCACGCCCACAAACCACCTAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TACATCGT-----------------TTTCGTAAATTAAATAT-----------GT.............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................ACAGGAACATATCGAATCTAGT.......................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................TTTTCCCGATTTCGACCGATA-TTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TTTTCCCGATTTCGACCGATA-..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................TCAAAA---------------------------------------------------------------------------------------------------------------------------------------------AGTATTGA-----AATT---------TCTTGTTCA..........................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTTTCAAGTGGGCTGCTCC........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TATCGAATCTAGTCGGGAAAT...............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................AA---------------------------------------------------------------------------------------------------------------------------------------------AGTATTGA-----AATT---------TCTTGTTCACACA......................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................TTTCCCGATTTCGACCGATA-TTTCAAAA---------------------------------------------------------------------------------------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TTTTCAGTCCTTTTTAAATTTTTTTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TCTTGTTTTTACATCGT-----------------TT.........................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTAAATTAAATAT-----------GTTTCAC---TTT-----------.......................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CACCTAAAACTGTCAAGCCCACACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATAT-----------GTTTCAC---TTT-----------TGGT--------------------------------------TTTC.........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................TCGAATCTAGTCGGGAAATTTGGTT.........................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TCGGGAAATTTGGTTAAAGCATT.................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-----------GTTTCAC---TTT-----------TGGT--------------------------------------TTTCTCCAGT...................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................GA-----AATT---------TCTTGTTCACAC.......................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTC-TCTCTTGTTTTTACG................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTC-TCTCTTGTTTTTACG................................................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AAGCATTC-TCTCTTGTTT.....................................................................................................................................................................................1870.1410000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATTTTT-------------------------------------------------------------TTTCATTTCAATCCTTTT----T-TTTCCCAATTTCTAGCGATA-TTCCAGAA---------------------------------------------------------------------------------------------------------------------------------------------AATGTTGA-----AATT---------TCTCCTTTGCACTTCCACT--------------------------AGCTGAGTAACGGGT----ATCTGA--TAGTCGGGGAACTCGACTATAGCATTC-TATCTTGCTTTAAACTTAT-----------------ATTTGCAGTTCGTGCTCTGAAAAATCGGGATTATC---TTT-----------AGGACCACACCATGTCCTTC----------------------TCTTT---------CCACGTCATCTGCCAA--TCTTCGAGGGTC-----------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................TTTCTAGCGATA-TTCCAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.0810100000
droYak3
TTTTAT-------------------------------------------------------------ATTTTTTTACATTTTTTT--A-G----------------------------------------------------TTTTGTAAATTTCTCTCGACTTGCCAAAAATATTTT----------------------------TACCACGCC---------------------------------------------------------------------------------CACTTTCACT--------------------------AGCTGAGTAACGGGT----ATCAAA--TAGTCGGGGAACTCGACTATAGCGTTC-TCTCTTGTTTTTGTTTTTA-----------------AGTTGATTT--ATTTA----------------TTGTTTTTATTTGCTTTTATTAAG--------------------------------------TTTATTCAGTTGACCTTTGTCTTCGGTCTG--TCTTCAAGAATCTTA--GTTTGTATCTTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................CT--------------------------AGCTGAGTAACGGGT----ATCAAA--TAGTC......................................................................................................................................................................................................................28200.05100000010000
................................................................................................................................................................................................................................................................................................................CT--------------------------AGCTGAGTAACGGGT----ATC................................................................................................................................................................................................................................20200.05101000000000
droEug1
GCATAC-------------------------------------------------------------TC---A-----------------------------------------------------ACATACTTCCTCTTCCCCTTG---------------------------------------------------------------------------------------------------------------------------------------------------TGAATTCCCACTAGCAAAATAATATTTTAAAATTTTGTAAAACAGTAACGGGT----ATCTTA--TAGTCGCGGCACTCGACTATAGTGTTT-CCTCTTGTTTCTATTATTT-----------------TTTTTTACAAAAAA------AAAATCT-GCCTAGT---TTT--T--------GTAT--------------------------------------GGTTTTCAGGCCAC----ACTCCAATTGGGC------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ATATCG-------------------------------------------------------------CTT---------------------------------------------------------------------------------------------TGCTGAATATATATC----------------------------TCTTGCTCC--CTTT-----------------------------------------TTATATA-----TACC---------TTTT------GCTCCCTTA--------------------------AGCTGAGTAACGGGT----AGCTGA--TAGTCGAGGCACTTGACTTTAGCATTC-TTTTTTGTTAAT--TTTGTTTAAGTTTTTATAAT--ATTGTTTAATTGAATT---------TGAGAATATT--ATTT-----------CGTC--------------------------------------CATGTAGAGCTAACATTTTTTCCCTATATGTT-CTTTTGGGGTCTCA--CCCATTGCTT-TSizeHit CountTotal NormTotal
No Reads
droTak1
GTTTTA--TTGT-----------------------------------------------------------------------------G-TTTATCAA----------------------------------------------------TACCTATCGAAATGTAGAAGAAATTTTTTAAATCGGACCATTCGTTAAAAAGTTA--CGG--------------------------------------------------CGGAT-CA-----AAGTTTTTCTCCATCTCTTTCGCACTCCCTTT--------------------------AGCTGAGTAACGGGT----ATCTGA--TAGTCGGGGCACCCGACTATAGCGTTC-TCTCTTGTTTCTCCTTATA-TA------------TATCTCCTTAATTCGATT-------ACAAAGATGATT---TTT-----------CAGT--------------------------------------TATAACCGGCGG-----T--------------TATACAAGTCTGCTG--CCTCCTGCCCCCSizeHit CountTotal NormTotal
No Reads
droEle1
ATTGTTGCTTGT---------------------------------------------------------GC------------------G----------------------------------------------------CTTCGGTCATATCTATCGGTAGACCCAAACAATTTTTTAAATCGAGCCAC--------------------------CTTAGCTTGTTTTGT----------------------AGGAGAAATATTTA-----GGTT---------GG---------------GT--------------------------GACTGAGTAACGGGT----ATCTAA--TAGTCGGGGAACTTGACTATAGCGTTCCTTTTTTGTTTTT-TAAAGA-----------------ATAAATAAATAGATTACCATAAACAT----------------------------------------------------------------------------------------CTTTGGCCAGCTGC--------TTATG--CCGTCC-----TSizeHit CountTotal NormTotal
No Reads
droRho1
CTTTTT-------------------------------------------------------------GTCTTT------------------------------------------------------------------TTTTCCTG----------------------------------------------------------------TGGTCACTATAATTCACATTATGTTAAAAAAAAAAAACAATACAAGAAGGCATATTTATATTAAGTT---------G---------------TTT--------------------------AGCTGAGTAACGGGT----ATCTAA--TAGTCGAGGCACTCGACTATAACGTTC-TCTCTTGTTTTTCTTTAAT-----------------ATTCGCATTTTATTTTT--------------------CTTTCTT-----------G-TATTTAAAGCAATC-TTTTTTAAAATGCCCTATCAGTAAAAAC--------TTTGATTTAAATTGGATTTTATCCTGAAACTTATTATATTTATGTTGSizeHit CountTotal NormTotal
No Reads
droFic1
TAAT--------------------------------------------------------------------------------------------------------------TAAAAA---------------------------------------------------------------------------------AGTTT---------------------------------------------------------TGATGA-----AATT---------CC---------------TT--------------------------ATCCGAGTTACTGGT----ATCTGA--TAGTTGCGGCATTGGATTATAGCGTTC-TCTTTTGTTTTTAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTTGACACATACTTTAAATGGGCTGCACCGGGAATTTTG--CCAGCTATGCTCSizeHit CountTotal NormTotal
No Reads
droAna3
TTGTTT-------------------------------------------------------------ATA------AATAGTGTTTTATT-TACAATTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCTATTAACCTGG-----------TTTA--------------------------------------TCTATTTAGTTGATACCTACTTTAAATGGATGTCCCCGGGAATACTT--CCTGCTATTTTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TTCATT-------------------------------------------------------------TCA--TTTTTATATTTTT----T-TGTAACATTTTAGGCTTACTACCCAAAAAAAATCAGCATGCTTTTAT-----------------------------------------------------------------------------------------------------------------------------------------------------ATTTGTTTAGGAAT---AA---------------------GTGGAAGATGAGAAACGGGT----ATTATA--AAGTCGGGAAACTCGACTATAGCTGTCCTTTCTGGTTTCTAAATTGT-----------------TT--------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
dp5
CTTTTG-------------------------------------------------------------TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--------------------------------------CCCCTTCAGTTCATTCATATTTCACTTGGAGTTCGCCTGGCATTATG--CCAGCCATTATCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TCCCTT-------------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-----------TTTT--------------------------------------CCCCTTCAGTTCATTCATATTTCACTTGGAGTTCGCCTGGCATTATG--CCAGCCATTATCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACAACAGCTATTTCACGTGGGGAGATGCAGGAATATTG--CCACCGCTTACTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TCCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTTGATACCTACTTCAAATGGGCCGATCCTGGCATTTTA--CCGGCCTTAACASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droGri2
C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTGAATCCTATTTCAAATGGGCTGATCCTGGTATCATG--CCGGGATTAACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 09:59 AM