ID:

dsi_3250

 Coordinate:

x:8050095-8050346 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.9

Flybase annnotation

exon [x_8050347_8050427_+]; CDS [x_8050347_8050427_+]; exon [x_8049975_8050094_+]; CDS [x_8049975_8050094_+]; intron [x_8050095_8050346_+]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GATTGAACTGCGCATCCTGGAGGAGACCTCCGCACCTCCCTCGCGACCACGTGAGTATTCCCTGTTTCTTTCTATGGGGATGTAATAAGAGGGAACTTGATATTCGAGATCTTGTAAATCAAGAGCTTAAATTAAGAGCTTAGTAGCCTACTTTTATGCATTTTTGCTCGGTAAATATCAAGTTCCATGTCTTACTTATGTTTCCGCGTCGACTTTACCATGCGAAATTGACTTCTCATCTGAACTACATGGCTCCATCTATCCTCTGGGCTGTGCGGGTGGTTTGTTTTTGTGGAGATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGAAAGTTC
**********************************************************************************************************************************************************...........((.(((.((((((.((((..........))))))))))))).))..............********************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M053
female body
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
...........................................................................................................................................................................................................CCGCGTCGACTTTACCATGC................................................................................................................................. 20 0 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................................................................................TATGCATTTTTGCTCGGTAAATATCAAGT......................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0
............................................................................................................................................................................................................................................CATCTGAACTACATGGCTCCAC.............................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
.ATTGAACTGCGCATCCTGGAGGA........................................................................................................................................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................TGACTTCTCATCTGAACTACATGGCA.................................................................................................. 26 1 1 1.00 1 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................GCGAAATTGAATTCT.................................................................................................................... 15 1 20 0.20 4 0 0 0 4 0 0 0
.................................................................TTCTTTCGATGGGGAT............................................................................................................................................................................................................................................................................... 16 1 5 0.20 1 0 0 0 1 0 0 0
..........CGGATCCTGGAGGCGACC.................................................................................................................................................................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 1 0 0 0
...................................................TGAGTATTCCCGGGTTC............................................................................................................................................................................................................................................................................................ 17 2 9 0.11 1 0 0 0 0 1 0 0
........................................................................................................CGAGATCTTGTAAAC......................................................................................................................................................................................................................................... 15 1 9 0.11 1 0 0 0 0 1 0 0
..................................CCTCCCTCGCTACCA............................................................................................................................................................................................................................................................................................................... 15 1 9 0.11 1 0 0 0 1 0 0 0
.............................................................................................................................................................................................................................GCGAAATTGAATTCTC................................................................................................................... 16 1 15 0.07 1 0 0 0 1 0 0 0
........................................................................GATCGGGATGTAATAACA...................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 1
...TGAACCGCGCATCCCG............................................................................................................................................................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................GAGCCCGGGCTTGGTACA................................... 18 3 20 0.05 1 0 0 0 1 0 0 0
................................................................................................................................................................................................................................................................................................TTTCTGGAGACCAGACCGG............................................. 19 3 20 0.05 1 0 0 0 0 1 0 0
..........................................................................................................................................................................GTAAATATCACGGTCC...................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 1 0

Anti-sense strand reads

CTAACTTGACGCGTAGGACCTCCTCTGGAGGCGTGGAGGGAGCGCTGGTGCACTCATAAGGGACAAAGAAAGATACCCCTACATTATTCTCCCTTGAACTATAAGCTCTAGAACATTTAGTTCTCGAATTTAATTCTCGAATCATCGGATGAAAATACGTAAAAACGAGCCATTTATAGTTCAAGGTACAGAATGAATACAAAGGCGCAGCTGAAATGGTACGCTTTAACTGAAGAGTAGACTTGATGTACCGAGGTAGATAGGAGACCCGACACGCCCACCAAACAAAAACACCTCTAGTCGGGCCCTACCCATGTAGTAGATGACGATGCCGCTGACGTTGGCTTTCAAG
*********************************************************************************************************************************...........((.(((.((((((.((((..........))))))))))))).))..............********************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 M023
head
....................................................................................................................................................................................................................................................................................................ACCTCTAGGCGGGCCC............................................ 16 1 1 2.00 2 0 2 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................TGCCGCTGATGGTAGCTTTCAA. 22 3 3 1.33 4 4 0 0 0 0 0 0
............................................................................................................................CGAATTTAAGTCTCGA.................................................................................................................................................................................................................... 16 1 1 1.00 1 1 0 0 0 0 0 0
.................................TGGAGAGCGCGCTGGTGC............................................................................................................................................................................................................................................................................................................. 18 2 1 1.00 1 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................GCCGCTGATGGTAGCTTTCAA. 21 3 6 0.50 3 0 0 3 0 0 0 0
..........................................................................................................................................................................................................................................................CCGAGGTCGATAGGA....................................................................................... 15 1 3 0.33 1 0 0 0 1 0 0 0
...........................................................GGGACAAAGAAAGATATAC.................................................................................................................................................................................................................................................................................. 19 2 3 0.33 1 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CCGCTGATGGTAGCTTTCAA. 20 3 9 0.33 3 2 0 0 0 0 1 0
.........................................................................................................................................................................................................................................................CCCGAGGTCGATAGGA....................................................................................... 16 2 20 0.20 4 1 0 0 3 0 0 0
............................AGGTGTGGAAGGAGCGCCG................................................................................................................................................................................................................................................................................................................. 19 3 19 0.16 3 0 0 3 0 0 0 0
...................................................................................................TATATGCTCTAGAAC.............................................................................................................................................................................................................................................. 15 1 8 0.13 1 0 0 0 0 1 0 0
..................................................................................................CTATAAGCTGTAGAAATTTTA......................................................................................................................................................................................................................................... 21 3 13 0.08 1 0 0 0 0 0 0 1
............................AGGTGTGGAAGGAGCGC................................................................................................................................................................................................................................................................................................................... 17 2 16 0.06 1 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................GGTCGGGGCCTGCCCATG.................................... 18 3 18 0.06 1 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:8050045-8050396 + dsi_3250 GATTGAACTGCGCATCCTGGAGGAGACCTCCGCACCTCCCTCGCGACCACGTGAGTATTCCCTGTTT---------------------------------------CTT--TCTATGGGGATGTAATAAGAGGGAACTTGATATTCGA----G-------------------------------------------ATCTTG------------------------------TAAATCAAGAGC-------------------------------------------------------------------------------------T-----------------------------T--AAATTAAGAGCT----------------------------------------------------------------------TAGTAGCCTACTTTTATGCATTTTTGC-TCGGTA---------------AATA---------------TCAAGTTCCATGTCTTA---CTTATG-TTTCCGCGTCGACTTT--ACCATGCGAAATTGACTTCTCATCTGA---AC--TAC--ATGGCT------CCATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCG--GGTGGTTTG----------TTTTT-----GTGGAGATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGAAAGTTC
droSec2 scaffold_35:328215-328566 + GATTGAACTGCGCATCCTGGAGGAGACCTCCGCACCTCCCTCGCGACCACGTGAGTATTCCCTGTTC---------------------------------------CTT--TCTATGGGGATGTAATAAGAGGGAACTTGATATTCGA----G-------------------------------------------ATCTTG------------------------------TAAATCAAGAGC-------------------------------------------------------------------------------------T-----------------------------T--AAATTAAGAGCT----------------------------------------------------------------------TAGTAGCCTATTTTTATGCATTTTTGC-TCGTTG---------------AATA---------------TCAAGTTCCATGTCTTA---CTTATG-TTTCCGAGTCGACTTT--ACCATGCGAAATTGACTTCTCATCTGA---AC--TAC--ATGGCT------CCATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCG--GGTGGTTTG----------TTTTT-----GTGGAGATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGAAAGTTC
dm3 chrX:8478559-8478925 + GATTGAGCTGCGCATCCTGGAGGAGACATCCGCACCACCCTCGCGACCACGTGAGTATACCCTATTC---------------------------------------CTT--TCTATGCGGATGTAATAAGAGGGAACTTGATATTCGA----G-------------------------------------------TTATTGTACCA------------------TTTG-----AATCAA------------------------------------------------------------------------------------------AT--------TTATGCC------------------------------------ACT-------------------------------------------------GCATATTGTGAGTAGCCTATTTTTATGCATTTTTGC-TCGGTG---------------AATA---------------TCAAATTCCATGTCTTA---CTTAAC-TTTCCGAGTCGATTGT--AGTATGCGAAATTGACTTTTCATCTGA---AC--TAC--ATGGCT------CCATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCG--GGTGGTTATTTCTA-----TTTGT-----TTGGATATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGAAAGTTC
droEre2 scaffold_4690:6632427-6632819 - GATTGAATTACGCATCCTGGAGGAGACCTCCGCACCTCCCTCGCGACCACGTGAGTATTCCTTATTC---------------------------------------TTT--TGTATGGGGATGTAATAAGAGGGAACTTGATGTTAAA----G-------------------------------------------TGTTCGAACCAAAA--CCGAGCAAATGAATTTGAAA------------------------------------------------------------------T------CAAGTAAGAGCCTCAAGAGTGTGCC-----------------------------------------------------ACTTTTAGACTCCTTACTTAGAAGATT-----TC----------------------------------CAATTTGT---CAAATTTGC-TCGGTG---------------AATA---------------TCAAGTTCCAAGCCTTA---CTTACC--TTCCGAGTCGACTGT--ACCATCCGAAATTGACTTCTCATCTGA---AC--TAC--ATGACT------CCATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCG--GGTGGTTTT--------------------TTGGCGATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGGAAGTTC
droYak3 X:12833169-12833553 - GATTGAATTGCGCATCCTGGAGGAGACCTCTGCGCCTCCGTCGCGACCACGTGAGTATTCCTTGTTC---------------------------------------CTTGTTGTATGGGGATGTAATAAGAGGGAACTTGATATGGGA----G-------------------------------------------TTTCTGAACCAAAAAGCCCAGCAAACGAATTTGAAA------------------------------------------------------------------T------GCAGTAAGAACTCCAAAGG-------------------------------------------------------------------------------------------------TACTATGTACATCTGGATA-------------GTTTGTATGCATGATTGC-TGGGTG---------------AATA---------------TCAAGTTCCAAGCTTTA---ATTACC-TTTCCGAGTCGACTGT--ACCATTCGAAATTGACTTCTCATCTGA---AC--TAC--ATGACA------CCATCTAA-----------------------------------------------------------------------------------------CCTCTGGGTGCTGTGCG--GGTGGTTAT--------------------TTGGCGATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGGAAGTTC
droEug1 scf7180000408744:99766-100130 + GATTGAATTACGCATCCTGGAGGAGACCTCCGCTCCACCCTCGCGACCACGTGAGTATCCTCAATTC---------------------------------------TTT--CTTACAGGAATGTATAAAAAAGGAACTTGATATTGCA----CA------------------------------------------TGTTTAAGCGAAAA--T--------------------------------CAAAATGATTTCTTC------------------------------------TGAGATTTA--------------------------------------------------------------------------------------AAAACTC-TATTAAAGTCACCTAAA----ACACTTTAAA-------------------------------------------CTGTG---------------CAAA---------------TCAAGTTCCAAGTCTTA---CATACT-TCTCCGAGTAAACTGT--ACCATTCAAAATTGACTTCTCATCTGA---AC--TAT--GTGACT------TCATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCG--GGTGGTTAA----------T-TTT-----ATGGCGATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACAGGAAGTTC
droBia1 scf7180000302069:945167-945558 - GATTGAGCTGCGCATCCTGGAGGAGACCTCGGCACCGCCTTCACGACCACGTGAGTACCGTCCAATG---------------------------------------CTA--TTTATAGGAAAGCGTAGAAAAGGAACTTGATATGAGC---------------------------------------------------------AAAAA--------------------------------CA-----------TCAACTGGA--------------------------ATTGCT---------CAAGAAGGCGTTCCAAAAGAATGCAATCATACATTTTACGCTGGGATCTCGGTATA--AATT-----TTTGATTGCATACTTTTAGACACCTT-GATTGGGGGTT------------------------------------------------------------------TC---------------AATA---------------TCAAGTTCCGAGCCTAA---CTTGCC-TCTCCGCGTATAATCT--T----------CTGACTTCTCATCTGA---AC--CGA--ACGACT------CCATCTAT-----------------------------------------------------------------------------------------TCTCTGGG--CTGTGCG--GGTGGCTGT--------------------TTGGCGATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGGAAGTTC
droTak1 scf7180000414549:205486-205682 + A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA---------------TCAAGTTCCAAGCTTAG---CCCACT--TT----ATATACTGT--ACCATCCAAAATTGACTTCTCATCTGAACAACCGTATGTATGACT----ATCCATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCT---GTGGTTATTTGTGTGGTGTTTTTGGCGATTGGCGATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGGAAGTTC
droEle1 scf7180000491006:1927785-1928191 + GATTGAATTACGCATCCTGGAGGAGACCTCCGCACCTCCCTCGCGACCACGTGAGTATCAACTATTC---------------------------------------CTC--TTTATAGGGTTGAGTAAAAATGGAACTTGATATTAAA----TATAATTGA----------------------------------------------------------------TTTGA-----------------------AATTACTTATA------------------------------------------------------------AATGTTATGATACATTTAACTCCGGAAATGCGGTATATAAT-T-----GATGGTGGCATACTTTTGAATAACTT-AATTAAAGTAT-----T----TT---------------------------------------------------TCTTT---------------AATA---------------TCAAGTTCCATGCCTTTTCATTGACT-TTTCCGTGTATACTGTATACCATCGATAATTGACTTCTCATCTGATGAAC--TAT--TTGACTATATATCCATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCG--GGTGGTTTT--------------------TCGGCGATCAGCCCGAGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGGAAGTTC
droRho1 scf7180000779514:107450-107846 - GATTGAATTACGCATCCTGGAGCAGACCTCCGCACCTCCCTCGCGACCACGTGAGTATCAACTATTC---------------------------------------TTA--TTTATAGATA--TA-TAAGAAGGAACTTGATATTGAA----AATAATTTATGACTATTCTAAGCATATGGAGTGCTCC----------------------------------------A-----------------------AATCACTTGGA--------------------------AAAGCT---------CTTG-----------AAAGTATGC-----------------TGTGACATA----------------------TGTCATAGTTTTGGTCAGTCT--ATTGAGGTAT-----T----GT----------------------------------------------------TGTG---------------AATA---------------TCAAGTTCCATGCTTTT--AATGACTATTCCCAAGTATACTGT--ACCATCGAAAATTGACTTCTCATCTGA---AC--CAC--ATGACT------CCATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCGTTGGTGGTTAT--------------------TCGGGGATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGGAAGTTC
droFic1 scf7180000451789:282146-282602 + GATTGAGTTACGCATCCTGGAGGAGACCTCCGCACCTCCCTCGCGACCACGTGAGTATCTTCTATAT---------------------------------------TTT--TTTTTGCAGATATACTAAAAAGGAACTTGACATTAGCAGTAGA------------------------------------------AAATTAAAAGAAAA--T--------------------------------TCAAGTGAAATCTCTTGGATTGAAAGTGAATCAATAATGATTTGA------AAACCATTA----AAGAGATTTTTAGAGTATGCAATTGTGTATTATATTCTGGAAATCCGGAGTATAATCT-----TTTG--GGCATACATTAAGACATCTT-TTTAGGAGATT-----TCAAAA------------------------------C--AT--------TGTTCGT-TTCGTG---------------AATA---------------TCAAGTTCCAAGCCTAA---TTT---------------ACTGT--TCCATTGGAAATTGACTTCTCATCTAA---AC--TAT--ATGACT------CCATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCG--GGTGGTTTT--------------------TTGGCGATCAGCCCGGGATGGTTACATCATCTACTGCTACGGCGACTGCAACCGGAAGTTC
droKik1 scf7180000302344:1718863-1719143 + AATTGAGCTACGCATCCTGGAGGAGACCTCGGCACC-CCCTCGCGACCACGTGAGTATTTTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTATGA------------------------------------------------------------------TTTTCCCATCAATAGGGTTGTGTTTGAGAAATATTATTTATTAGTTCCTCAAGACCCAAGCTAT----------------------GA------------------GGCATAACATCTAA---ACCCTAT--ATTTAT------CTATCTAT------------------------------------------------CTATAT--------------------ATATCGACTTATTCTTCTCTGGG--TTGTGCG--TGTGGTTAA----------ATGGT-----A-TGCGATCAGCCCGGGATGGTTACATTATCTACTGCTATGGCGACTGCAACCGGAAGTTC
droAna3 scaffold_13334:945001-945326 + AATTGAGCTGCGAATTTTGGAAGAAACCTCGGCACCTCCATCGCGACCACGTGAGTATTATGTATTTGATACCCGGTACTTCCCAAGAGTACTCTCCCTTCTCTTCCCTTCATAATTATG---TC-----CAAGAACTTGATTTTAAT------------------------------------------------ATTT----------------------------AATATAAAGAAAAATATTAAAATAAAGTTTT-------------------------------------AAAGTATTG-------------------------------------------------------------------------------------AAATA-TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAAAATATATACAAATTATGTATGATATA-TGTATGATGCTCCTCTGGGTACGGTGCG--TTTGGTATT----------CTGGT-----TCGGAGATCAGCCCGGGATGGTTACATCATTTATTGTTATGGCGATTGCAACCGGAAGTAC
droBip1 scf7180000396733:589412-589680 + AATAGAGCTGAGAATTTTGGAAGAAACTTCGGCACCTCCTTCGCGACCACGTGAGTATTAACTGTTAGATACCCGGTACTTTTTAAGAGTACTTT---------TCCTTTTAAAATAATG-------------------------------------------------------------------------------------------------------------------ATCAAGACC-------------------------------------------------------------------------------------T-----------------------------A--AAAAAGAAATCT----------------------------------------------------------------------TAAAAAATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTAAAATATATA---------TATGATATA-TGTATGATTCTCCTCTGGGTTCGGTGCG--TTTGGTTAT----------CTGGT-----TCGGAGTTCAGCCCGGGATGGTTACATCATTTATTGTTATGGCGATTGCAACCGGAAGTAC
dp5 XL_group1e:3844271-3844329 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGCAGCAGCTCGGGATGGTTACATCATCTACTGCTACGGCGATTGCAATCGCAAGTTC
droPer2 scaffold_17:780025-780090 + GTT------------CCTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGAAGCAGCTCGGGATGGTTACATCATCTACTGCTACGGCGATTGCAATCGCAAGTTC
droWil2 scf2_1100000004515:299696-300024 - GATTGAGTTACGCATATTGGAGGAGACATCGGCACCGCCATCACGACCGCGTAAGTATGGCCAA----------------------AAG-------------------------------------------------------------------------------------------AAGGGTCCCTAACCCAATCTCC------------------------------TAAACCAAGACC-------------------------------------------------------------------------------------C-----------------------------A------------------------TTTCTTTATCCCTAA-----------------------------------------------------------------CTTTTTT-TTGATA---------------ATGG---------------TTGT-TTCCCTCCTT-TCTCTTTACT-ACCCCGTTCATGATGTGTTC--T------TCTTCTTTTCTTTTGA---AT--CAA--TTATCA------TTGTTATTTTTCTTGGCGGGGTGTGACGACGGCGTCGGCGAAAAAAAAAAAAAAAAAAAAACACACA------------------------------------------------------------------------------------CACAGCACGCGATGGCTACATCATCTACTGCTATGGCGACTGCAATCGCAAATTT
droVir3 scaffold_12970:9495962-9496014 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCGCGCGATGGCTACATCATCTACTGCTACGGGGACTGCAATCGCAAGTTC
droMoj3 scaffold_6473:1276853-1276925 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTTTA----------TATGT-----GTGGGCCACAGCGCGCGATGGCTACATCATCTATTGCTATGGAGACTGCAATCGCAAGTTC
droGri2 scaffold_15203:9203858-9203913 + GATCGAGCTGCGCATTTTGGAGGAGACATCAGCGCCGCCCTCCCGTCCACGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GATTGAACTGCGCATCCTGGAGGAGACCTCCGCACCTCCCTCGCGACCACGTGAGTATTCCCTGTTT---------------------------------------CTT--TCTATGGGGATGTAATAAGAGGGAACTTGATATTCGA----G-------------------------------------------ATCTTG------------------------------TAAATCAAGAGC-------------------------------------------------------------------------------------T-----------------------------T--AAATTAAGAGCT----------------------------------------------------------------------TAGTAGCCTACTTTTATGCATTTTTGC-TCGGTA---------------AATA---------------TCAAGTTCCATGTCTTA---CTTATG-TTTCCGCGTCGACTTT--ACCATGCGAAATTGACTTCTCATCTGA---AC--TAC--ATGGCT------CCATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCG--GGTGGTTTG----------TTTTT-----GTGGAGATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGAAAGTTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCGTCGACTTT--ACCATGC..........................................................................................................................................................................................................................................................2012.00200200000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCATTTTTGC-TCGGTA---------------AATA---------------TCAAGT........................................................................................................................................................................................................................................................................................................2911.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGA---AC--TAC--ATGGCT------CCAC..........................................................................................................................................................................................................2211.00100100000000000000
.ATTGAACTGCGCATCCTGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTTCTCATCTGA---AC--TAC--ATGGCA------..............................................................................................................................................................................................................2611.00100000000000010000
.................................................................................................................................................CGA----G-------------------------------------------ATCTTG------------------------------TAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1590.11100000000001000000
droSec2
GATTGAACTGCGCATCCTGGAGGAGACCTCCGCACCTCCCTCGCGACCACGTGAGTATTCCCTGTTC---------------------------------------CTT--TCTATGGGGATGTAATAAGAGGGAACTTGATATTCGA----G-------------------------------------------ATCTTG------------------------------TAAATCAAGAGC-------------------------------------------------------------------------------------T-----------------------------T--AAATTAAGAGCT----------------------------------------------------------------------TAGTAGCCTATTTTTATGCATTTTTGC-TCGTTG---------------AATA---------------TCAAGTTCCATGTCTTA---CTTATG-TTTCCGAGTCGACTTT--ACCATGCGAAATTGACTTCTCATCTGA---AC--TAC--ATGGCT------CCATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCG--GGTGGTTTG----------TTTTT-----GTGGAGATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGAAAGTTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...TGAACTGCGCATCCTGGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
......ACTGCGCATCCTGGAGGAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.ATTGAACTGCGCATCCTGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
GATTGAACTGCGCATCCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.....AACTGCGCATCCTGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
dm3
GATTGAGCTGCGCATCCTGGAGGAGACATCCGCACCACCCTCGCGACCACGTGAGTATACCCTATTC---------------------------------------CTT--TCTATGCGGATGTAATAAGAGGGAACTTGATATTCGA----G-------------------------------------------TTATTGTACCA------------------TTTG-----AATCAA------------------------------------------------------------------------------------------AT--------TTATGCC------------------------------------ACT-------------------------------------------------GCATATTGTGAGTAGCCTATTTTTATGCATTTTTGC-TCGGTG---------------AATA---------------TCAAATTCCATGTCTTA---CTTAAC-TTTCCGAGTCGATTGT--AGTATGCGAAATTGACTTTTCATCTGA---AC--TAC--ATGGCT------CCATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCG--GGTGGTTATTTCTA-----TTTGT-----TTGGATATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGAAAGTTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
GATTGAGCTGCGCATCCTGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......GCTGCGCATCCTGGAGGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000
.............ATCCTGGAGGAGACATCCGCACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...TGAGCTGCGCATCCTGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AGCTGCGCATCCTGGAGGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000
........TGCGCATCCTGGAGGAGACATCCGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TTGAGCTGCGCATCCTGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000
.ATTGAGCTGCGCATCCTGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000
.........GCGCATCCTGGAGGAGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGTCGATTGT--AGTATGCG.........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCG--..........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
......GCTGCGCATCCTGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.....AGCTGCGCATCCTGGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.ATTGAGCTGCGCATCCTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGG--CTGTGCG--GGTGGTT...................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..........CGCATCCTGGAGGAGACATCCGCACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GATTGAGCTGCGCATCCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-----TTGGATATCAGCCCGG.............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GAGCTGCGCATCCTGGAGGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AGCTGCGCATCCTGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....AGCTGCGCATCCTGGAGGAGACATCCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCG--GGTG......................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TGCGCATCCTGGAGGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTACATCATCTACTGCTACGGCGAC...............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGAGCTGCGCATCCTGGAGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.............................................................................................................................................TATTCGA----G-------------------------------------------TTATTGTACCA------------------TT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ATTGAGCTGCGCATCCTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
................................CACCACCCTCGCGACCACGTGAGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TT--TCTATGCGGATGTAATAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGC-TCGGTG---------------AATA---------------TCAAA.........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
..TTGAGCTGCGCATCCTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..TTGAGCTGCGCATCCTGGAGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......GCTGCGCATCCTGGAGGAGACATCCGCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCTATTTTTATGCATTTTTGC-T.....................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--AGTATGCGAAATTGACGA...............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................TATGCGGATGTAATAAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................CACCACCCTCGCGACCAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TATACCCTATTC---------------------------------------CTT--TCTATGCGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACTGCTACGGCGACTGCAACCGAA.....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GATTGAGCTGCGCATCCTGGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............TCCTGGAGGAGACATCCGCACCACCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..TTGAGCTGCGCATCCTGGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
GATTGAGCTGCGCATCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
droEre2
GATTGAATTACGCATCCTGGAGGAGACCTCCGCACCTCCCTCGCGACCACGTGAGTATTCCTTATTC---------------------------------------TTT--TGTATGGGGATGTAATAAGAGGGAACTTGATGTTAAA----G-------------------------------------------TGTTCGAACCAAAA--CCGAGCAAATGAATTTGAAA------------------------------------------------------------------T------CAAGTAAGAGCCTCAAGAGTGTGCC-----------------------------------------------------ACTTTTAGACTCCTTACTTAGAAGATT-----TC----------------------------------CAATTTGT---CAAATTTGC-TCGGTG---------------AATA---------------TCAAGTTCCAAGCCTTA---CTTACC--TTCCGAGTCGACTGT--ACCATCCGAAATTGACTTCTCATCTGA---AC--TAC--ATGACT------CCATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCG--GGTGGTTTT--------------------TTGGCGATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGGAAGTTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................GTGTGCC-----------------------------------------------------ACTTTTAGACTCCTTACTT............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
..........................................................................................................................................................................................................................................................................................................T------CAAGTAAGAGCCTCAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
......................................................................................................................................................................................................................................................................................................................AAGAGCCTCAAGAGTGTGCC-----------------------------------------------------ACTTTTA........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT---CAAATTTGC-TCGGTG---------------AATA---------------TCAA..........................................................................................................................................................................................................................................................................................................2611.0011000000
............CATCCTGGAGGAGACCTCCGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
GATTGAATTACGCATCCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
droYak3
GATTGAATTGCGCATCCTGGAGGAGACCTCTGCGCCTCCGTCGCGACCACGTGAGTATTCCTTGTTC---------------------------------------CTTGTTGTATGGGGATGTAATAAGAGGGAACTTGATATGGGA----G-------------------------------------------TTTCTGAACCAAAAAGCCCAGCAAACGAATTTGAAA------------------------------------------------------------------T------GCAGTAAGAACTCCAAAGG-------------------------------------------------------------------------------------------------TACTATGTACATCTGGATA-------------GTTTGTATGCATGATTGC-TGGGTG---------------AATA---------------TCAAGTTCCAAGCTTTA---ATTACC-TTTCCGAGTCGACTGT--ACCATTCGAAATTGACTTCTCATCTGA---AC--TAC--ATGACA------CCATCTAA-----------------------------------------------------------------------------------------CCTCTGGGTGCTGTGCG--GGTGGTTAT--------------------TTGGCGATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGGAAGTTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................GACCTCTGCGCCTCCGTCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00303000000000
.....AATTGCGCATCCTGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200010010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCGAGTCGACTGT--ACC..............................................................................................................................................................................................................................................................1911.00100100000000
........................GACCTCTGCGCCTCCGTCGCGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
GATTGAATTGCGCATCCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..........................................................................................................................GTAATAAGAGGGAACTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.ATTGAATTGCGCATCCTGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
droEug1
GATTGAATTACGCATCCTGGAGGAGACCTCCGCTCCACCCTCGCGACCACGTGAGTATCCTCAATTC---------------------------------------TTT--CTTACAGGAATGTATAAAAAAGGAACTTGATATTGCA----CA------------------------------------------TGTTTAAGCGAAAA--T--------------------------------CAAAATGATTTCTTC------------------------------------TGAGATTTA--------------------------------------------------------------------------------------AAAACTC-TATTAAAGTCACCTAAA----ACACTTTAAA-------------------------------------------CTGTG---------------CAAA---------------TCAAGTTCCAAGTCTTA---CATACT-TCTCCGAGTAAACTGT--ACCATTCAAAATTGACTTCTCATCTGA---AC--TAT--GTGACT------TCATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCG--GGTGGTTAA----------T-TTT-----ATGGCGATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACAGGAAGTTCSizeHit CountTotal NormTotal
No Reads
droBia1
GATTGAGCTGCGCATCCTGGAGGAGACCTCGGCACCGCCTTCACGACCACGTGAGTACCGTCCAATG---------------------------------------CTA--TTTATAGGAAAGCGTAGAAAAGGAACTTGATATGAGC---------------------------------------------------------AAAAA--------------------------------CA-----------TCAACTGGA--------------------------ATTGCT---------CAAGAAGGCGTTCCAAAAGAATGCAATCATACATTTTACGCTGGGATCTCGGTATA--AATT-----TTTGATTGCATACTTTTAGACACCTT-GATTGGGGGTT------------------------------------------------------------------TC---------------AATA---------------TCAAGTTCCGAGCCTAA---CTTGCC-TCTCCGCGTATAATCT--T----------CTGACTTCTCATCTGA---AC--CGA--ACGACT------CCATCTAT-----------------------------------------------------------------------------------------TCTCTGGG--CTGTGCG--GGTGGCTGT--------------------TTGGCGATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGGAAGTTCSizeHit CountTotal NormTotal
No Reads
droTak1
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA---------------TCAAGTTCCAAGCTTAG---CCCACT--TT----ATATACTGT--ACCATCCAAAATTGACTTCTCATCTGAACAACCGTATGTATGACT----ATCCATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCT---GTGGTTATTTGTGTGGTGTTTTTGGCGATTGGCGATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGGAAGTTCSizeHit CountTotal NormTotal
No Reads
droEle1
GATTGAATTACGCATCCTGGAGGAGACCTCCGCACCTCCCTCGCGACCACGTGAGTATCAACTATTC---------------------------------------CTC--TTTATAGGGTTGAGTAAAAATGGAACTTGATATTAAA----TATAATTGA----------------------------------------------------------------TTTGA-----------------------AATTACTTATA------------------------------------------------------------AATGTTATGATACATTTAACTCCGGAAATGCGGTATATAAT-T-----GATGGTGGCATACTTTTGAATAACTT-AATTAAAGTAT-----T----TT---------------------------------------------------TCTTT---------------AATA---------------TCAAGTTCCATGCCTTTTCATTGACT-TTTCCGTGTATACTGTATACCATCGATAATTGACTTCTCATCTGATGAAC--TAT--TTGACTATATATCCATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCG--GGTGGTTTT--------------------TCGGCGATCAGCCCGAGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGGAAGTTCSizeHit CountTotal NormTotal
No Reads
droRho1
GATTGAATTACGCATCCTGGAGCAGACCTCCGCACCTCCCTCGCGACCACGTGAGTATCAACTATTC---------------------------------------TTA--TTTATAGATA--TA-TAAGAAGGAACTTGATATTGAA----AATAATTTATGACTATTCTAAGCATATGGAGTGCTCC----------------------------------------A-----------------------AATCACTTGGA--------------------------AAAGCT---------CTTG-----------AAAGTATGC-----------------TGTGACATA----------------------TGTCATAGTTTTGGTCAGTCT--ATTGAGGTAT-----T----GT----------------------------------------------------TGTG---------------AATA---------------TCAAGTTCCATGCTTTT--AATGACTATTCCCAAGTATACTGT--ACCATCGAAAATTGACTTCTCATCTGA---AC--CAC--ATGACT------CCATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCGTTGGTGGTTAT--------------------TCGGGGATCAGCCCGGGATGGGTACATCATCTACTGCTACGGCGACTGCAACCGGAAGTTCSizeHit CountTotal NormTotal
No Reads
droFic1
GATTGAGTTACGCATCCTGGAGGAGACCTCCGCACCTCCCTCGCGACCACGTGAGTATCTTCTATAT---------------------------------------TTT--TTTTTGCAGATATACTAAAAAGGAACTTGACATTAGCAGTAGA------------------------------------------AAATTAAAAGAAAA--T--------------------------------TCAAGTGAAATCTCTTGGATTGAAAGTGAATCAATAATGATTTGA------AAACCATTA----AAGAGATTTTTAGAGTATGCAATTGTGTATTATATTCTGGAAATCCGGAGTATAATCT-----TTTG--GGCATACATTAAGACATCTT-TTTAGGAGATT-----TCAAAA------------------------------C--AT--------TGTTCGT-TTCGTG---------------AATA---------------TCAAGTTCCAAGCCTAA---TTT---------------ACTGT--TCCATTGGAAATTGACTTCTCATCTAA---AC--TAT--ATGACT------CCATCTAT-----------------------------------------------------------------------------------------CCTCTGGG--CTGTGCG--GGTGGTTTT--------------------TTGGCGATCAGCCCGGGATGGTTACATCATCTACTGCTACGGCGACTGCAACCGGAAGTTCSizeHit CountTotal NormTotal
No Reads
droKik1
AATTGAGCTACGCATCCTGGAGGAGACCTCGGCACC-CCCTCGCGACCACGTGAGTATTTTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTATGA------------------------------------------------------------------TTTTCCCATCAATAGGGTTGTGTTTGAGAAATATTATTTATTAGTTCCTCAAGACCCAAGCTAT----------------------GA------------------GGCATAACATCTAA---ACCCTAT--ATTTAT------CTATCTAT------------------------------------------------CTATAT--------------------ATATCGACTTATTCTTCTCTGGG--TTGTGCG--TGTGGTTAA----------ATGGT-----A-TGCGATCAGCCCGGGATGGTTACATTATCTACTGCTATGGCGACTGCAACCGGAAGTTCSizeHit CountTotal NormTotal
No Reads
droAna3
AATTGAGCTGCGAATTTTGGAAGAAACCTCGGCACCTCCATCGCGACCACGTGAGTATTATGTATTTGATACCCGGTACTTCCCAAGAGTACTCTCCCTTCTCTTCCCTTCATAATTATG---TC-----CAAGAACTTGATTTTAAT------------------------------------------------ATTT----------------------------AATATAAAGAAAAATATTAAAATAAAGTTTT-------------------------------------AAAGTATTG-------------------------------------------------------------------------------------AAATA-TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAAAATATATACAAATTATGTATGATATA-TGTATGATGCTCCTCTGGGTACGGTGCG--TTTGGTATT----------CTGGT-----TCGGAGATCAGCCCGGGATGGTTACATCATTTATTGTTATGGCGATTGCAACCGGAAGTACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................TCCATCGCGACCACGTGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...............TTTGGAAGAAACCTCGGCACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
droBip1
AATAGAGCTGAGAATTTTGGAAGAAACTTCGGCACCTCCTTCGCGACCACGTGAGTATTAACTGTTAGATACCCGGTACTTTTTAAGAGTACTTT---------TCCTTTTAAAATAATG-------------------------------------------------------------------------------------------------------------------ATCAAGACC-------------------------------------------------------------------------------------T-----------------------------A--AAAAAGAAATCT----------------------------------------------------------------------TAAAAAATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTAAAATATATA---------TATGATATA-TGTATGATTCTCCTCTGGGTTCGGTGCG--TTTGGTTAT----------CTGGT-----TCGGAGTTCAGCCCGGGATGGTTACATCATTTATTGTTATGGCGATTGCAACCGGAAGTACSizeHit CountTotal NormTotal
No Reads
dp5
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGCAGCAGCTCGGGATGGTTACATCATCTACTGCTACGGCGATTGCAATCGCAAGTTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
GTT------------CCTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGAAGCAGCTCGGGATGGTTACATCATCTACTGCTACGGCGATTGCAATCGCAAGTTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
GATTGAGTTACGCATATTGGAGGAGACATCGGCACCGCCATCACGACCGCGTAAGTATGGCCAA----------------------AAG-------------------------------------------------------------------------------------------AAGGGTCCCTAACCCAATCTCC------------------------------TAAACCAAGACC-------------------------------------------------------------------------------------C-----------------------------A------------------------TTTCTTTATCCCTAA-----------------------------------------------------------------CTTTTTT-TTGATA---------------ATGG---------------TTGT-TTCCCTCCTT-TCTCTTTACT-ACCCCGTTCATGATGTGTTC--T------TCTTCTTTTCTTTTGA---AT--CAA--TTATCA------TTGTTATTTTTCTTGGCGGGGTGTGACGACGGCGTCGGCGAAAAAAAAAAAAAAAAAAAAACACACA------------------------------------------------------------------------------------CACAGCACGCGATGGCTACATCATCTACTGCTATGGCGACTGCAATCGCAAATTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..TTGAGTTACGCATATTGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...TGAGTTACGCATATTGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAAAAAAAAAAAAAAAAAAAA..................................................................................................................................................2320.50101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAAAAAAAAAAAAAAAAA.....................................................................................................................................................2090.11101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAAAAAAAAAAAAAAAAAA.................................................................................................................................................22200.05101000
droVir3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCGCGCGATGGCTACATCATCTACTGCTACGGGGACTGCAATCGCAAGTTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTTTA----------TATGT-----GTGGGCCACAGCGCGCGATGGCTACATCATCTATTGCTATGGAGACTGCAATCGCAAGTTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GATCGAGCTGCGCATTTTGGAGGAGACATCAGCGCCGCCCTCCCGTCCACGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............TTTTGGAGGAGACATCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110

Generated: 05/18/2015 at 12:01 PM