ID:

dsi_3177

 Coordinate:

2r:12659074-12659250 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.2 -14.2 -14.1 -13.3

Flybase annnotation

exon [2r_12657118_12659385_-]; CDS [2r_12657118_12659385_-]

No Repeatable elements found

Sense Strand Reads

#####################################################################################################################################################################################################################################################################################
ATACAAAGTATCAGATATTCTTCCTCCTTTTGAACATGAAGAATACCAAGGTCTGTTGTTGAATGGCGATGGCAGCGGAACAGTTCGAAAGATTGAGGTTTTTAAGAATGCACAGGAAGAAACTGACAGCGACGAAGAGGACCCGAAGATTTTTAAGGCCAAAGGCAAAGGCCCCGTATTCAAAGTATCTGATATTCTTCCTCCTTTTGAACATGAAGAATACCAAGGTCTTTTGTTGAATGGCGATGGCAGTGGAACAGTTCGAAAGATTGAGGTA
********************************************************...................(((.....((((.........(((((((..............)))))))........))))......)))************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 M024
male body		 M023
head
 GSM343915
embryo
...........................................................................................................................TGACAGCGACGAAGAGGACCCG.................................................................................................................................... 22 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0
.............................TTGAACATGAAGAATACCAAGGTCTGT............................................................................................................................................................................................................................. 27 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
...........................................TACCAAGGTCTGTTGTTGAATGGCGA................................................................................................................................................................................................................ 26 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................TGAATGGCGATGGCAGTGGAACAGTT............... 26 0 1 2.00 2 0 0 0 0 0 1 0 1 0 0 0 0
.................................ACATGAAGAATACCAAGGTCTGTT............................................................................................................................................................................................................................ 24 0 1 2.00 2 0 0 0 0 0 0 0 0 1 1 0 0
.......................................................................................AAAGATTGAGGGTTGTA............................................................................................................................................................................. 17 2 11 1.00 11 0 0 11 0 0 0 0 0 0 0 0 0
.............................................................................................................................ACAGCGACGAAGAGGACCCGAAGATTTT............................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................AAGGTCTGTTGTTAAATGGCGATGGC............................................................................................................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................AGAAACTGACAGCGACGAAGAGGACCC..................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................TGAATGGCGATGGCATTGGAACAGTT............... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................TGTTGAATGGCGATGGCAGCGG....................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................TTTTAAGAATGCACAGGAAGAAAC.......................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................TCCGAAAGATTGAGGGTTGTA............................................................................................................................................................................. 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................TACCAAGGTCTGTTGTTGAATGG................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
....................................TGAAGAATACCAAGGTCTGTTGTTAAA...................................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................TTGAATGGCGATGGCAATGGAACAGTT............... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................TGGCAGCGGAACAGTTCGAAAGATTGA..................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................AGGCAGTGGAACAGTTCGAAAGATTGA.... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................TGAATGGCGATGGCAATGGAACAGTT............... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................TGTTGAATGGCGATGGCAGCGGAA..................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................TTTGTTGAATGGCGATGGCAGTGGAACA.................. 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................AGGACCCGAAGATTTTTAAGGCCA.................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................TGTTAAATGGCGATGGCAGTGGAAC................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................TTTTGAACATGAAGAATACCAAGGTCTG.............................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................AGGTCTGTTGTTGAATGGCGA................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................TGGCGATGGCAGTGGAACAGTTCGAA........... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................AGGACCCGAAGATTTTTAAGGCC..................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................TAAATGGCGATGGCAGTGGAACAGTT............... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TTTTAAGAATGCACAGGAAGAAACT......................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CAGCGACGAAGAGAACCCGAAGATTT............................................................................................................................. 26 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................GAAAGATTGAGGGTTGTA............................................................................................................................................................................. 18 2 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................ACAGTTCGAAAGATTGAGGT. 20 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
...........................TTTTGAACATGAAGAATACCAAGGTCT............................................................................................................................................................................................................................... 27 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
.............GATATTCTTCCTCCTTTTG..................................................................................................................................................................................................................................................... 19 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
............................TTTGAACATGAAGAATACCAAGGTCT............................................................................................................................................................................................................................... 26 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TTTTGAACATGAAGAATACCAAGGTCT.............................................. 27 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................ACAGTTCGAAAGATTGAGGT.................................................................................................................................................................................. 20 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................AAAGATTGAGATTGGTAAGAAT........................................................................................................................................................................ 22 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................GATATTCTTCCTCCTTTTG.................................................................... 19 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
........................TCCTTTTGAACATGAAGAATACCAAGG.................................................................................................................................................................................................................................. 27 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................TTTGAACATGAAGAATACCAAGGTCT.............................................. 26 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TCCTTTTGAACATGAAGAATACCAAGG................................................. 27 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................GAAGAAACTGACAGCGACGAAGA........................................................................................................................................... 23 0 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................CAGGAAGAAACTGACAGCGACGAAGAG.......................................................................................................................................... 27 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................GTCTGTTTTTGAATGGTGA................................................................................................................................................................................................................ 19 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................ATTGAGGTTTAGAAGAATG....................................................................................................................................................................... 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1
....................................................................................TAGAAAGATTGAGGGTTGTA............................................................................................................................................................................. 20 3 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................TCGAAACATTGAGGGTTGTA............................................................................................................................................................................. 20 3 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................TTTCGAACATGAAGAAGA........................................................................................................................................................................................................................................ 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................................................TTTCGAACATGAAGAAGA....................................................... 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1 0
..................................................................................GTTCGAAAGATTCAGGAT................................................................................................................................................................................. 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1 0
...............................................................................ACAGTGCGAAAGATT....................................................................................................................................................................................... 15 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................ACAGTGCGAAAGATT...... 15 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................CGAAAGATGGAGGGTTGTA............................................................................................................................................................................. 19 3 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................AAAGGTCCGTTGTTGA....................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
CTACAAACTATCAGATA.................................................................................................................................................................................................................................................................... 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TATGTTTCATAGTCTATAAGAAGGAGGAAAACTTGTACTTCTTATGGTTCCAGACAACAACTTACCGCTACCGTCGCCTTGTCAAGCTTTCTAACTCCAAAAATTCTTACGTGTCCTTCTTTGACTGTCGCTGCTTCTCCTGGGCTTCTAAAAATTCCGGTTTCCGTTTCCGGGGCATAAGTTTCATAGACTATAAGAAGGAGGAAAACTTGTACTTCTTATGGTTCCAGAAAACAACTTACCGCTACCGTCACCTTGTCAAGCTTTCTAACTCCAT
************************************************************************************************************************************...................(((.....((((.........(((((((..............)))))))........))))......)))******************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M024
male body		 M023
head
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
....TTTCATAGTCTATAAGAAGGA............................................................................................................................................................................................................................................................ 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................AGAAGGAGGAAAACT................................................................... 15 0 2 1.00 2 2 0 0 0 0 0 0 0 0
............................................................................................................................................................CCGGTCTTCCTTTCCGGGGCA.................................................................................................... 21 3 3 1.00 3 0 0 0 1 2 0 0 0 0
..................AGAAGGAGGAAAACT.................................................................................................................................................................................................................................................... 15 0 2 1.00 2 2 0 0 0 0 0 0 0 0
....................................................................................ACCTGTCTAACTCCAAAAACT............................................................................................................................................................................ 21 3 2 0.50 1 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................AAAAATTCAGGTTTCCGT.............................................................................................................. 18 1 3 0.33 1 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................................................................................GTCAAGCTTTCCAACTGGAT 20 3 3 0.33 1 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................AGAAGGAGTAACACCTGTAC.............................................................. 20 3 16 0.31 5 5 0 0 0 0 0 0 0 0
..................AGAAGGAGTAACACCTGTAC............................................................................................................................................................................................................................................... 20 3 16 0.31 5 5 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TAAGAAGGAGGAAAAC.................................................................... 16 0 7 0.29 2 0 0 2 0 0 0 0 0 0
................TAAGAAGGAGGAAAAC..................................................................................................................................................................................................................................................... 16 0 7 0.29 2 0 0 2 0 0 0 0 0 0
.............................................................................................................................................................CGGTCTTCCTTTCCGGGGCA.................................................................................................... 20 3 8 0.25 2 0 0 0 2 0 0 0 0 0
...........................................................................................................................................................................................AGCCTATATCAAGGAGGAAA...................................................................... 20 3 16 0.19 3 0 0 3 0 0 0 0 0 0
..........AGCCTATATCAAGGAGGAAA....................................................................................................................................................................................................................................................... 20 3 16 0.19 3 0 0 3 0 0 0 0 0 0
.................................................................................................................................................................................................TAAGAAGGAGGAAAA..................................................................... 15 0 7 0.14 1 0 0 1 0 0 0 0 0 0
................TAAGAAGGAGGAAAA...................................................................................................................................................................................................................................................... 15 0 7 0.14 1 0 0 1 0 0 0 0 0 0
...........................................................................GCGTCGTCAAGCTTTCCAAC...................................................................................................................................................................................... 20 3 9 0.11 1 0 0 0 1 0 0 0 0 0
.................AAGAAGGAGGAAAAC..................................................................................................................................................................................................................................................... 15 0 9 0.11 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................AAGAAGGAGGAAAAC.................................................................... 15 0 9 0.11 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................TCATAGACTATAAGAC.............................................................................. 16 1 10 0.10 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................CACGTAGTCAAGCTTTCTTAC..... 21 3 10 0.10 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................AAAAAAATTTACCGCTACGGT.......................... 21 3 11 0.09 1 0 0 0 0 0 0 0 0 1
............................................................................................................................................................CCGGTCTTCCTTTCCGGGGC..................................................................................................... 20 3 11 0.09 1 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................AAGTTTCACAGACTTTCAGA............................................................................... 20 3 20 0.05 1 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:12659024-12659300 - dsi_3177 ATACAAAGTATCAGATATTCTTCCTCCTTTTGAACA---TGAAGAATACC--------AAGGTCTGTTGTTGAATGGCGATGGCA---GCGGAACAGTTCGAAAGATTGAGGTTTTTAAGAA------------------------------TGCACAGGAAGAAACTGACAGCGACGAAGAGGAC----------------------------CCGAAGATTTTTAAGGCCAAAGGCAAAGGCCCCGTATTCAAAGTATCTGATATTCTTCCTCCTTTTGAACATGAAGAATACCAAGGTCTT-TTGTTGAA-------------------------------------------------------------TGGCGATGGCAGTGGA--------------------------------ACAGTTCG-----------AAAGATTGAGGTA
droSec2 scaffold_1:9484687-9484824 - ATACAAAGTATCAGATATTCTTCCTCCTTTTGAACA---CGAAGAATACC--------AAGGTCTGTTGTTGAATGGCGATGGCA---GCGGAACAGTTCGAAAGATTGAGGTGTTTAAGAG------------------------------AGCACAGGAAGGAACTGACAGCGACGAAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr2R:11989060-11989201 - ATACAAGTTATCAGATATTCTTCCTCCTTTTGAACA---CGATGAATACC--------AACCTCTTTTGTTGGATGGGGATGGCA---GTGGAACAGTTCGAAAGATTAAGGTATTTAAAAG------------------------------TGCACAGGAAGAAACTGACAGCGACGAAGATGAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4845:13868381-13868591 + AATCGATGTAATAGACATTCTTCCTCCTTTTGAGGA---TGATGAATACC--------AACCTCTTGTGTTAGATGGTGATGGCA---GCGGAACAGTTCGAAAGATTAAGGTCTTTAAGAG------------------------------TCCACAGGAAGAAACTGACAGCGACGAAGAGGATAATGATTATGAGCCACAAGATAG----------------------------CGAAGGCTTTGTATCTGAGGAATTTGACA------------------GCGAAGAGTC---TGACA-------GT-----------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2R:16994421-16994677 + AATCGATGTAATAGACATTCTTCCTCCTTTTGAAGT---TGATGAATACC--------AACCTCTTTTGCTGGAAGGAGATGGCA---GAGGAACAGTTAAGAAGATTAAGGTCTTTAAGAG------------------------------TGCACAGGAAGAAACTGACAGCGACGAAGAGGATAATGATTATGAGCCACAAGATAG----------------------------CGAGGACTTTGTGTCTGAGGAATTCGACA------------------GCGAAGAGTC---TGACA-------GTGAAGACACAAGCA----------------------------------------GCGCAGACTTTGACAG----------------------------------------------TAAT-----------GAAGATTTCTACA
droEug1 scf7180000409672:895743-896047 - GAGTAATGGACTAGCCTTACCTTCTCCATTTGAAAA---CATAGAGAACC--------GCGCACACTTGTTGCAAAGTGATGGCGAGACAGGAACGGTTCGAAAGATTGAGGTCTTTGAGAGTGCGTTGTATGAAAATAAGTTATTTGAGAGTGCGTTGGAAGAAATAGACAGCGATGAACTAGATGATGATTATGAACCACCAGA-------------------------------CGACGATGTCGAATCTGAAGAATTTGTCA------------------GCGAAAATTC---TGAAA-------GTGAAAACTCAAGCA----------------------------------------GCGAAGATTTTGACAG------------------------------TGAATATAGCGAAGAATTCG---ACAGT------GATTTTGACA
droBia1 scf7180000301506:2935755-2935994 - GACCAAAAGGTTAGCCTTACCTGCTCCATTCGAAAA---TGTTGAGCACC--------GAGCTCACCTATTGCAAGGCGATGGCA---AGGGAGTAGTTCGAAAGATCGAGGTGTTCGAGAG------------------------------TGCTTTGGCGGAAATTGACAGTGACGAAGAGGATGATGACTATGAACCACAGGATAG----------------------------CGACGATTTTGGATCTGAGGAATTTGAAA------------------GCGACGAATC---TGACA-------GTGAAGATACCAGCA----------------------------------------GTGAGGAGTTCGACAG--------------------------------------------------------------------------
droTak1 scf7180000415795:568210-568480 + GAGCAAAATACTAGACTTTCCTGCCCCATTTGAAAA---TGTTGAGAACC--------GTGCTCACCTGTTGCACGGTAATGGCA---AAGGAATAGTTCGAAAAATCGAGGTATTTGAGAA------------------------------TGCATATGCGAATATCGACAGTGACGAACTGGATGATGATTATGAACCACAGTACGA----------------------------CGAAGATTTTAGCTCTGAAGATTTTACCA------------------GCGATGAATT---TGACA-------GTGAAGATGCAAGCG----------------------------------------GCGATGATTTTGATGATGGCGAGGGA--------------------------------ACAATTCA-----------AATGATGGAGGTA
droEle1 scf7180000491107:1000131-1000378 - GGGCAATATTCTTGACTTACCTGCTCCATTTGAGGAA--CCATTAGAACCCACCATTAGAACCCACTTATTGCAAGGTGATGACA---AGGGGGTAGTGCGAAAGATTGAGGTCTTTGAGAA------------------------------TGCACTGGCTGAATTTGACAGCGACGATGA------AGACTACGAACCACAAGAAAG----------------------------CGACGATTTTGTGTCTGAAGAATTCGACA------------------GCGAAGATTC---AGATTCTTCTG-ATGATGATTTGGACA----------------------------------------GCGAAG---------------------------------------------------------------------------ACTGCGACG
droRho1 scf7180000779911:107066-107284 + ---------------------------------------------------------------------TTGAAAGCAGATAGAA---AAGGATTAGTTCGAAAGATCGAGCTCTTCAAGAA------------------------------CGCATTGACGAAAACTGATAGCGACGATGATGA------TTACGACGAGGCAGA-CAAAGAGCCTAAGATTTTTAAAGGTCATGGAA-----------------------------------------------------------------------------AAGAAGTGGTTAAAAAGGTCAAGGTCCTTAAGAACTCACCACAAAGCAGCAAAGATTTTGA------------------------------------------------ATCCAATCAATGTGA-TTTGATCGAGGTC
droFic1 scf7180000453948:1236417-1236718 - AGGGAAAATACTTGCCCTACCTGCCCCATTTGATGAATTGTCAGAGAACT--------GCTTTCGTCCGACACAAAATGATGCTA---AATGTACAGTTCGCAAAATTGAGGTATTTGAAAG------------------------------TGCACTGGCAGACATTGATAGTGATGA------TTATGATTATGAACCAAATGGGAG----------------------------CAG------CGGGTCTGAAGAATTCTACA------------------GCGAAAACTC---TGACA-------GTGAGGACGAAAGTA----------------------------------------GCGAAAACTCTGAAAGTGACGACGAATTCAGCCAAGATTTTGACAGTGAAGATAGCGAAGACTACG---ACAGTGATGAAGATTTCGAAA
droKik1 scf7180000302476:2686249-2686327 - ------------------------TCCCTTTGAAGAACCTGACGACAGCA--------GGGTCCACCTTTTTCAAGGCGATTCCC---AAGGGTCTGTCCGCAAAATTATGGTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATACAAAGTATCAGATATTCTTCCTCCTTTTGAACA---TGAAGAATACC--------AAGGTCTGTTGTTGAATGGCGATGGCA---GCGGAACAGTTCGAAAGATTGAGGTTTTTAAGAA------------------------------TGCACAGGAAGAAACTGACAGCGACGAAGAGGAC----------------------------CCGAAGATTTTTAAGGCCAAAGGCAAAGGCCCCGTATTCAAAGTATCTGATATTCTTCCTCCTTTTGAACATGAAGAATACCAAGGTCTT-TTGTTGAA-------------------------------------------------------------TGGCGATGGCAGTGGA--------------------------------ACAGTTCG-----------AAAGATTGAGGTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................TGACAGCGACGAAGAGGAC----------------------------CCG.............................................................................................................................................................................................................................................2213.00300000000000003000
.............................TTGAACA---TGAAGAATACC--------AAGGTCTGT...................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000000020000000
..............................................TACC--------AAGGTCTGTTGTTGAATGGCGA......................................................................................................................................................................................................................................................................................................................................................................................2612.00200000001000010000
.....................................................................................................................................................................................................................................................................................................................TGAA-------------------------------------------------------------TGGCGATGGCAGTGGA--------------------------------ACAGTT..........................2612.00200000010100000000
.................................ACA---TGAAGAATACC--------AAGGTCTGTT..................................................................................................................................................................................................................................................................................................................................................................................................2412.00201100000000000000
.........................................................................................................................................................................ACAGCGACGAAGAGGAC----------------------------CCGAAGATTTT.....................................................................................................................................................................................................................................2811.00100000000000001000
.................................................................................................................................................................AGAAACTGACAGCGACGAAGAGGAC----------------------------CC..............................................................................................................................................................................................................................................2711.00100000000000001000
...................................................................TGTTGAATGGCGATGGCA---GCGG..........................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
.................................................................................................................TTTTAAGAA------------------------------TGCACAGGAAGAAAC...............................................................................................................................................................................................................................................................................................2411.00100000000001000000
..............................................TACC--------AAGGTCTGTTGTTGAATGG.........................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
................................................................................TGGCA---GCGGAACAGTTCGAAAGATTGA........................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
...................................................................TGTTGAATGGCGATGGCA---GCGGAA........................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
...............................................................................................................................................................................................................................................................................................................T-TTGTTGAA-------------------------------------------------------------TGGCGATGGCAGTGGA--------------------------------ACA.............................2811.00100010000000000000
.....................................................................................................................................................................................AGGAC----------------------------CCGAAGATTTTTAAGGCCA.............................................................................................................................................................................................................................2411.00100000000000010000
...........................TTTTGAACA---TGAAGAATACC--------AAGGTCTG....................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
...........................................................AGGTCTGTTGTTGAATGGCGA......................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................TGGCGATGGCAGTGGA--------------------------------ACAGTTCG-----------AA...........2611.00100000010000000000
.....................................................................................................................................................................................AGGAC----------------------------CCGAAGATTTTTAAGGCC..............................................................................................................................................................................................................................2311.00100000000000010000
.................................................................................................................TTTTAAGAA------------------------------TGCACAGGAAGAAACT..............................................................................................................................................................................................................................................................................................2511.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTTCG-----------AAAGATTGAGGT.2020.50100010000000000000
...........................TTTTGAACA---TGAAGAATACC--------AAGGTCT.....................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000010000000000
.............GATATTCTTCCTCCTTTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50100010000000000000
............................TTTGAACA---TGAAGAATACC--------AAGGTCT.....................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000000010000000
....................................................................................................................................................................................................................................................................................TTTTGAACATGAAGAATACCAAGGTCT.......................................................................................................................................................2720.50100000010000000000
.............................................................................................ACAGTTCGAAAGATTGAGGT.....................................................................................................................................................................................................................................................................................................................................................2020.50100010000000000000
......................................................................................................................................................................................................................................................................GATATTCTTCCTCCTTTTG.............................................................................................................................................................................1920.50100010000000000000
........................TCCTTTTGAACA---TGAAGAATACC--------AAGG........................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000000100000000
.....................................................................................................................................................................................................................................................................................TTTGAACATGAAGAATACCAAGGTCT.......................................................................................................................................................2620.50100000000010000000
.................................................................................................................................................................................................................................................................................TCCTTTTGAACATGAAGAATACCAAGG..........................................................................................................................................................2720.50100000000100000000
...............................................................................................................................................................GAAGAAACTGACAGCGACGAAGA................................................................................................................................................................................................................................................................................2320.50101000000000000000
............................................................................................................................................................CAGGAAGAAACTGACAGCGACGAAGAG...............................................................................................................................................................................................................................................................................2720.50100000000000010000
droSec2
ATACAAAGTATCAGATATTCTTCCTCCTTTTGAACA---CGAAGAATACC--------AAGGTCTGTTGTTGAATGGCGATGGCA---GCGGAACAGTTCGAAAGATTGAGGTGTTTAAGAG------------------------------AGCACAGGAAGGAACTGACAGCGACGAAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................AAGGTCTGTTGTTGAATGGCGATGGC..................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
...........................................GAATACC--------AAGGTCTGTTGTTGAATGGC........................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
......AGTATCAGATATTCTTCCTCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
dm3
ATACAAGTTATCAGATATTCTTCCTCCTTTTGAACA---CGATGAATACC--------AACCTCTTTTGTTGGATGGGGATGGCA---GTGGAACAGTTCGAAAGATTAAGGTATTTAAAAG------------------------------TGCACAGGAAGAAACTGACAGCGACGAAGATGAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................CAGGAAGAAACTGACAGCGACG....................................................................................................................................................................................................................................................................................22129.002900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................GGAAGAAACTGACAGCGACG....................................................................................................................................................................................................................................................................................2019.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................CAGGAAGAAACTGACAGCGACGA...................................................................................................................................................................................................................................................................................2318.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................GAAGAAACTGACAGCGACGAAGATGA.............................................................................................................................................................................................................................................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................GCACAGGAAGAAACTGACAGC........................................................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................AGGAAGAAACTGACAGCGACGAAGATG..............................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AACAGTTCGAAAGATTAAGGT.....................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................CAGGAAGAAACTGACAGCGA......................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................GATGGCA---GTGGAACAGTTC..................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................CAGGAAGAAACTGACAGCGACGAAGATG..............................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TGGCA---GTGGAACAGTTCGAAAG.............................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................ACAGGAAGAAACTGACAGCGACG....................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................GATTAAGGTATTTAAAAG------------------------------TGCACAG.......................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TGCACAGGAAGAAACTGACAGC........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................AG------------------------------TGCACAGGAAGAAACTGACAGCGA......................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................AGGAAGAAACTGACAGCGACGA...................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................GCACAGGAAGAAACTGACAGCGACG....................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................AGGTATTTAAAAG------------------------------TGCACAGGAAGA..................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................CAGTTCGAAAGATTAAGGT.....................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TTAAAAG------------------------------TGCACAGGAAGAAACT..............................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................ACAGGAAGAAACTGACAGCGACGAAGATC..............................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TTTGAACA---CGATGAATACC--------AACC........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................GAAACTGACAGCGACGAAGAT...............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................TGGGGATGGCA---GTGGAACAGT....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AG------------------------------TGCACAGGAAGAAACTGACAGCGACGA...................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CC--------AACCTCTTTTGTTGGATGGG........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................AAGAAACTGACAGCGACGAA..................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TTCGAAAGATTAAGGTATTTAAAAG------------------------------T.............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................ATGGCA---GTGGAACAGTTCGAAAGA............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AAAAG------------------------------TGCACAGGAAGAAACTGAC...........................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GGAACAGTTCGAAAGATTAAGGTATT..................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................CAGGAAGAAACTGACAGCGACGAAGA................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TTCGAAAGATTAAGGTATTTAAAAG------------------------------TG............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CTTTTGAACA---CGATGAATACC--------AACCTCT.....................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................AAG------------------------------TGCACAGGAAGAAACTGACAGCGA......................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................GAACAGTTCGAAAGATTAAGG......................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................A---GTGGAACAGTTCGAAAGA............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................GACAGCGACGAAGATGAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GGAACAGTTCGAAAGATTAAGGT.....................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................AAAG------------------------------TGCACAGGAAGAAACT..............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCCTCCTTTTGAACA---CGATGA.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AG------------------------------TGCACAGGAAGAAACT..............................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TGGCA---GTGGAACAGTTCGAAA..............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................AAGAAACTGACAGCGACGAAGA................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................CTGACAGCGACGAAGATG..............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TGGCA---GTGGAACAGTTCGAAAGATT..........................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................AAACTGACAGCGACGAAGATGA.............................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................AAACTGACAGCGACGAAG.................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................AAGAAACTGACAGCGACGAAG.................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CC--------AACCTCTTTTGTTGGATGG.........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TTTAAAAG------------------------------TGCACAGGAAGAAACTGAC...........................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................GATTAAGGTATTTAAAAG------------------------------TGCACA........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TTTTGAACA---CGATGAATACC--------AACC........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AG------------------------------TGCACAGGAAGAAACTGACA..........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AACAGTTCGAAAGATTCC........................................................................................................................................................................................................................................................................................................................................................18120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
droEre2
AATCGATGTAATAGACATTCTTCCTCCTTTTGAGGA---TGATGAATACC--------AACCTCTTGTGTTAGATGGTGATGGCA---GCGGAACAGTTCGAAAGATTAAGGTCTTTAAGAG------------------------------TCCACAGGAAGAAACTGACAGCGACGAAGAGGATAATGATTATGAGCCACAAGATAG----------------------------CGAAGGCTTTGTATCTGAGGAATTTGACA------------------GCGAAGAGTC---TGACA-------GT-----------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................CACAAGATAG----------------------------CGAAGGCTTT...............................................................................................................................................................................................................2011.0010001000
.........................................................................................................................................................CCACAGGAAGAAACTGAC...........................................................................................................................................................................................................................................................................................1811.0011000000
....................................................................................................................................................................................................AGCCACAAGATAG----------------------------CGAAGGCT.................................................................................................................................................................................................................2111.0010000100
droYak3
AATCGATGTAATAGACATTCTTCCTCCTTTTGAAGT---TGATGAATACC--------AACCTCTTTTGCTGGAAGGAGATGGCA---GAGGAACAGTTAAGAAGATTAAGGTCTTTAAGAG------------------------------TGCACAGGAAGAAACTGACAGCGACGAAGAGGATAATGATTATGAGCCACAAGATAG----------------------------CGAGGACTTTGTGTCTGAGGAATTCGACA------------------GCGAAGAGTC---TGACA-------GTGAAGACACAAGCA----------------------------------------GCGCAGACTTTGACAG----------------------------------------------TAAT-----------GAAGATTTCTACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................GTGAAGACACAAGCA----------------------------------------GCGCAGA...................................................................................2211.00101000000000
...........................................................................................................................................................................AGCGACGAAGAGGATAATGAT......................................................................................................................................................................................................................................................................2111.00100000010000
..................................................................................................................................................................................AAGAGGATAATGATTATGAGCC..............................................................................................................................................................................................................................................................2211.00100100000000
..............................................................................................................................................................................GACGAAGAGGATAATGATTATGAGC...............................................................................................................................................................................................................................................................2511.00100000010000
..............................................................................................................................................................................................................................................................................................................................CAAGCA----------------------------------------GCGCAGACTTTGACA...........................................................................2111.00100100000000
....................................................................................................................................................................AACTGACAGCGACGAAGAG...............................................................................................................................................................................................................................................................................1911.00100000010000
droEug1
GAGTAATGGACTAGCCTTACCTTCTCCATTTGAAAA---CATAGAGAACC--------GCGCACACTTGTTGCAAAGTGATGGCGAGACAGGAACGGTTCGAAAGATTGAGGTCTTTGAGAGTGCGTTGTATGAAAATAAGTTATTTGAGAGTGCGTTGGAAGAAATAGACAGCGATGAACTAGATGATGATTATGAACCACCAGA-------------------------------CGACGATGTCGAATCTGAAGAATTTGTCA------------------GCGAAAATTC---TGAAA-------GTGAAAACTCAAGCA----------------------------------------GCGAAGATTTTGACAG------------------------------TGAATATAGCGAAGAATTCG---ACAGT------GATTTTGACASizeHit CountTotal NormTotal
No Reads
droBia1
GACCAAAAGGTTAGCCTTACCTGCTCCATTCGAAAA---TGTTGAGCACC--------GAGCTCACCTATTGCAAGGCGATGGCA---AGGGAGTAGTTCGAAAGATCGAGGTGTTCGAGAG------------------------------TGCTTTGGCGGAAATTGACAGTGACGAAGAGGATGATGACTATGAACCACAGGATAG----------------------------CGACGATTTTGGATCTGAGGAATTTGAAA------------------GCGACGAATC---TGACA-------GTGAAGATACCAGCA----------------------------------------GTGAGGAGTTCGACAG--------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GAGCAAAATACTAGACTTTCCTGCCCCATTTGAAAA---TGTTGAGAACC--------GTGCTCACCTGTTGCACGGTAATGGCA---AAGGAATAGTTCGAAAAATCGAGGTATTTGAGAA------------------------------TGCATATGCGAATATCGACAGTGACGAACTGGATGATGATTATGAACCACAGTACGA----------------------------CGAAGATTTTAGCTCTGAAGATTTTACCA------------------GCGATGAATT---TGACA-------GTGAAGATGCAAGCG----------------------------------------GCGATGATTTTGATGATGGCGAGGGA--------------------------------ACAATTCA-----------AATGATGGAGGTASizeHit CountTotal NormTotal
No Reads
droEle1
GGGCAATATTCTTGACTTACCTGCTCCATTTGAGGAA--CCATTAGAACCCACCATTAGAACCCACTTATTGCAAGGTGATGACA---AGGGGGTAGTGCGAAAGATTGAGGTCTTTGAGAA------------------------------TGCACTGGCTGAATTTGACAGCGACGATGA------AGACTACGAACCACAAGAAAG----------------------------CGACGATTTTGTGTCTGAAGAATTCGACA------------------GCGAAGATTC---AGATTCTTCTG-ATGATGATTTGGACA----------------------------------------GCGAAG---------------------------------------------------------------------------ACTGCGACGSizeHit CountTotal NormTotal
No Reads
droRho1
---------------------------------------------------------------------TTGAAAGCAGATAGAA---AAGGATTAGTTCGAAAGATCGAGCTCTTCAAGAA------------------------------CGCATTGACGAAAACTGATAGCGACGATGATGA------TTACGACGAGGCAGA-CAAAGAGCCTAAGATTTTTAAAGGTCATGGAA-----------------------------------------------------------------------------AAGAAGTGGTTAAAAAGGTCAAGGTCCTTAAGAACTCACCACAAAGCAGCAAAGATTTTGA------------------------------------------------ATCCAATCAATGTGA-TTTGATCGAGGTCSizeHit CountTotal NormTotal
No Reads
droFic1
AGGGAAAATACTTGCCCTACCTGCCCCATTTGATGAATTGTCAGAGAACT--------GCTTTCGTCCGACACAAAATGATGCTA---AATGTACAGTTCGCAAAATTGAGGTATTTGAAAG------------------------------TGCACTGGCAGACATTGATAGTGATGA------TTATGATTATGAACCAAATGGGAG----------------------------CAG------CGGGTCTGAAGAATTCTACA------------------GCGAAAACTC---TGACA-------GTGAGGACGAAAGTA----------------------------------------GCGAAAACTCTGAAAGTGACGACGAATTCAGCCAAGATTTTGACAGTGAAGATAGCGAAGACTACG---ACAGTGATGAAGATTTCGAAASizeHit CountTotal NormTotal
No Reads
droKik1
------------------------TCCCTTTGAAGAACCTGACGACAGCA--------GGGTCCACCTTTTTCAAGGCGATTCCC---AAGGGTCTGTCCGCAAAATTATGGTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 09:42 PM