ID:

dsi_30986

 Coordinate:

3r:11570419-11570659 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-41.8 -41.7 -41.7

Flybase annnotation

five_prime_UTR [3r_11570660_11570820_-]; exon [3r_11570660_11570820_-]; five_prime_UTR [3r_11570286_11570418_-]; exon [3r_11570272_11570418_-]; intron [3r_11570419_11570659_-]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACGTGACTGGCAAGAGGAACCCACAATAACAATTCCGAAGACCGAGCGACGTGAGTAGACTTTGCCTTTATTGTTTACAAGTTATATCCGAGTTCTAGAATTACGTACATAGCGAGCATACTGGCGATTATTCATCGCTCGTGCGATTTGTTTTCATTCGAAAAAGCAAGTAGCAATTAAAAAAAAAAACAAAAGCCCGGCTCGCTAGTAAAATGTATAAAAAGCTTGGCCACCCAGCCAGAACATTGCAAATCGTCGCGGAGAGCTATCACAATCGCTCCTTATCGCCAGCTTTCCGTTCCAGATCCCGCTCCCAAGTTTCCAGTTTCCAGCTGCAGCGC
************************************************************************..................((((((.....(((((((.((((((((.....((((((.....))))))..(((.(((((((((........))))))))).)))........................))))))))))...)))))........(((((......)))))....((((........)))))))))).....********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 M053
female body
 O002
Head
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
..............................................................................................................................................................................................AGAAGCCCGGCTCGCT....................................................................................................................................... 16 1 7 4.29 30 0 8 0 0 22 0 0 0 0 0
.CGTGACTGGCAAGAGGAACC................................................................................................................................................................................................................................................................................................................................ 20 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0
........................................................................GTTTACAAGTTATATCCGAGT........................................................................................................................................................................................................................................................ 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................GCAAATCGTCGCGGAGAGCTATCAC..................................................................... 25 0 1 2.00 2 0 0 1 0 0 0 1 0 0 0
.CGTGACTGGCAAGAGTAACC................................................................................................................................................................................................................................................................................................................................ 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................CGCGGAGAGCTATCACAATCGCTC............................................................. 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...............................ATTCCGAAGACCGAGCGA.................................................................................................................................................................................................................................................................................................... 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................GTTTCCAGTTTCCAGCTG...... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................GCATTGCAAATCGTCGCG................................................................................. 18 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................GAAGCCCGGCTCGCT....................................................................................................................................... 15 1 10 1.40 14 0 7 0 1 5 0 0 0 0 1
...............................................................................................................................................................................................................................................AGAACATTGCAAATCGTCGCG................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................CCCAAGTTTCCAGTTTCCAGCTG...... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..............................................................................................CTAGAATTACGTACATAG..................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................AAATCGTCGCGGAGAGCTA......................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................GCAAATCGTCGCGGAGAGCT.......................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................TTGTTTACAAGTTATATCCGA.......................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................................ATTGCAAATCGTCGCGGAG.............................................................................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................ACATTGCAAATCGTCGCGTT............................................................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................................................................................ACATTGCAAATCGTCGCGGAG.............................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.CGTGACTGGCAAGAGGAACCCACAATAA........................................................................................................................................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
............................................AGCGACGTGAGTAGACTT....................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................GCTATCACAATCGCTCCTTATCGCC.................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
..................................................GTGAGTAGACTTTGCCTTTAT.............................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................GCCAGCTTTCCGTTCC....................................... 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................ACAATCGCTCCTTATCGCCAGC................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................CGCTCCTTATCGCCAGCC................................................ 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................ATTGCAAATCGTCGCG................................................................................. 16 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................................ATTGCAAATCGTCGCGGAGAGCT.......................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................ATTGCAAATCGTCGCGGA............................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................CTTTCCGTTCCAGATCCCG............................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
................................TTCCGAAGACCGAGCGAC................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..GTGACTGGCAAGAGGAACCCACAA........................................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................CGAGCGACGTGAGTAGACTTT...................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................AAGCCCGGCTCGCTGG..................................................................................................................................... 16 1 7 0.71 5 0 1 0 0 3 0 0 0 0 1
...........................................................................................................................................................................................................................................AGCCAGTACATTGCAAA......................................................................................... 17 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................AAGCCGGGATCGCTAGTA................................................................................................................................... 18 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................CCTTGGAAAGCGTCGCGG................................................................................ 18 3 20 0.20 4 0 1 0 1 0 2 0 0 0 0
..............................................................................................................................................................................................AGAAGCCCGGCTCGCTGGCA................................................................................................................................... 20 3 12 0.17 2 0 0 0 0 0 0 0 0 0 2
............................................................................................................................................................................................................................................................................................................CCACGTCCCGCTCCGAAGTT..................... 20 3 8 0.13 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................GTAGCAACTAAAAAAAA........................................................................................................................................................... 17 1 10 0.10 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................AAGCCGGAGTCGCTAGTAA.................................................................................................................................. 19 3 10 0.10 1 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................GTCGCAATTAAAAAAAAAAAAA...................................................................................................................................................... 22 2 14 0.07 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................GAGAAGCCCGGCTCGCT....................................................................................................................................... 17 2 18 0.06 1 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................AAAAAAACAAACGTCCGGCC........................................................................................................................................... 20 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................CATCGCAAATTGTCGCG................................................................................. 17 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................CGTGCGATTTGTTGT........................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TGCACTGACCGTTCTCCTTGGGTGTTATTGTTAAGGCTTCTGGCTCGCTGCACTCATCTGAAACGGAAATAACAAATGTTCAATATAGGCTCAAGATCTTAATGCATGTATCGCTCGTATGACCGCTAATAAGTAGCGAGCACGCTAAACAAAAGTAAGCTTTTTCGTTCATCGTTAATTTTTTTTTTTGTTTTCGGGCCGAGCGATCATTTTACATATTTTTCGAACCGGTGGGTCGGTCTTGTAACGTTTAGCAGCGCCTCTCGATAGTGTTAGCGAGGAATAGCGGTCGAAAGGCAAGGTCTAGGGCGAGGGTTCAAAGGTCAAAGGTCGACGTCGCG
*********************************************************************..................((((((.....(((((((.((((((((.....((((((.....))))))..(((.(((((((((........))))))))).)))........................))))))))))...)))))........(((((......)))))....((((........)))))))))).....************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 M025
embryo
 M023
head
 M053
female body
 GSM343915
embryo
.....................................................................................................................................................................................................................................................................................................................CGTGAGTTCAAAGGTCAAAGGC.......... 22 3 3 2.33 7 0 0 6 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................................................................................................GGGGCGAGGGTTCAA..................... 15 1 7 2.00 14 0 0 0 14 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................AGGGCGAGGGTTCAAAGGTCA............... 21 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0
........................................................................................................................................CGAGCACGCTAAACAAAAGTA........................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................TAACAAATGTTCAATATAGGCTCAAGATCT.................................................................................................................................................................................................................................................. 30 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................AATATAGGCTCAAGATCTTAATGC............................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................CTGGCTCGCTGCACTCATCT.......................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................GGTGTTATTGTTGAGGCGTCT............................................................................................................................................................................................................................................................................................................ 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................TCAAAGGTCAAAGGTCGACGT.... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
............................TGTTAAGGCTTCTGGCTCGCT.................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................GTCGAAAGGCAAGGTCTA................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................TTCAATATAGGCTCAAGATCT.................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TAACAAATGTTCAATATAGGC........................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................AGGGTTCAAAGGTCAAAGGTC......... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TAGGCTCAAGATCTTAATGCA........................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TCAATATAGGCTCAAGATCTT................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..................TGGGTGTTATTGTTAAGGCTT.............................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................CGAGCACGCTAAACAAA............................................................................................................................................................................................ 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................GGGCGAGGGTTCAAAGGTCA............... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................GGGCGAGGGTTCAAAGGTCAA.............. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.................TTGGGTGTTATTGTTAAGGCGT.............................................................................................................................................................................................................................................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................CTAGGGCGAGGGTTCAAAGGT................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................ATGTGGGTCGGTCTTGTAAC............................................................................................. 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TTGTTTTCGGGCCGAGCGATC..................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
..........................ATTGTTAAGGCTTCTGGCTCG...................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CGGTGGGGCGGTCTTG................................................................................................. 16 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...............CCCTGGGTGTTATTGTGA.................................................................................................................................................................................................................................................................................................................... 18 2 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................GGAGCGATCATTTTA............................................................................................................................... 15 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................CGTGAGTTCAAAGGTCAAAGG........... 21 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................CGTACGTATGACCGCTAATAC................................................................................................................................................................................................................. 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................................................................................................TTTAGCGGTCGAAAGGCAA......................................... 19 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................CTCGAGATCTTAATG............................................................................................................................................................................................................................................. 15 1 10 0.20 2 0 0 0 0 0 2 0 0 0 0 0 0
.......................................................................................GGATCGAGATCTTAATG............................................................................................................................................................................................................................................. 17 2 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................CGATAGTGTTAGGGAACAAT......................................................... 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 1
....................................................................................................................................................................................................................................................................................................................GCGCGGGTTCAAAGGTCT............... 18 2 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................GGGCGAGGGTTCAAG.................... 15 1 14 0.14 2 0 0 0 2 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................GGTGCAGGGCGAGGCTTCAA..................... 20 3 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................ATAGTGTTAGCAAGGAAA......................................................... 18 2 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................TTGTATCGATTAGCAGAGC................................................................................. 19 3 9 0.11 1 0 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................................................................................................................GCGCGGGTTCAAAGGTCTG.............. 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:11570369-11570709 - dsi_30986 ACGTGACTGGCAAGAGGAA-CCCA-----C----AAT------------AACAA-----TTCCGA--------------------------AGACCGAGCGACGTGAGTAGACTT-------TGCCTTTATTGTTT---------ACAAGTTATA--------TCCGAGTTCTAGAAT----TACGTACA----------TA----GCGAGCATACT-GGCGATTATTCATCGCTCGTGCG-ATTTGTTTTCAT----------------------------------------------------------------------------TCGAAAAAG-CAAGTAGCAATTAAAAAAAA-AAA-CAAAAGCC---------------------C--GGC-----------TCGCTAGTAAAATGTATAAAAAGCTT------GGCCACCCA-GCCAGAACATTGCAAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------TATCACAATC----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTCCGTTCC------AGATC------CCG-------C----TCCCAAG--TTTCCAGT---------------TTCCAGCTGCAGCG-------C-----------------
droSec2 scaffold_0:12398939-12399280 - ACGTGACTGGCAAGAGGAA-CCCA-----C----AAT------------AACAA-----TTCCGA--------------------------AGACCGAGCGACGTGAGTAGACTT-------TGCCTTTATTGTTT---------ACAAGTTATA--------TCCGAGTTCTAGAAT----TACGTACA----------TA----GCGAGCATACT-GGCGATTATTCATCGCTCGTGCG-ATTTGTTTTCAT----------------------------------------------------------------------------TCGAAAAAG-CAAGTAGCAATTAAAAAAAAAAAA-CAAAAGTC---------------------C--GGC-----------TCGCTAGTAAAATGTATAAAAAGCTT------GGCCACCCA-GCCAGAACATTGAAAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------TATCACAATC----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTCCGTTCC------AGATC------CCG-------C----TCCCAAG--TTTCCAGT---------------TTCCAGCTGCAGCG-------C-----------------
dm3 chr3R:9608124-9608466 + ACGTGACTGGCAAGAGGAA-CCCA-----C----AAT------------AACAA-----TTCCGA--------------------------AGACCGAGCGACGTGAGTAGACTT-------TGCCTTTATTGTTT---------ACAAGTTATA--------TCCGAGTTCTAGAAT----TACGTACA----------TA----GCGAGCATACT-GGCGATTATTCATCGCTCGTGCG-ATTTGTTTTCAT----------------------------------------------------------------------------TCGAAAACG-CAAGTAGCAATTAAAAAAAAAAAACCTAAAGCC---------------------C--GGC-----------TCGCTAGTAAAATGTATAAAAAGCTT------GGCCACCCA-GCCAGAACATTGCAAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------TATCACAATC----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTCCGTTCC------AGATC------CCG-------C----TCCCAAG--TTTCCAGT---------------TTCCAGCTGCAGCG-------C-----------------
droEre2 scaffold_4770:12024032-12024371 - ACGTGACTGGCAAGAGGAA-CCCA-----C----AAT------------AACAA-----TTCCGA--------------------------AGACCGAGCGACGTGAGTAGACTT-------TGCCTTTATTGTTG---------ACAAGTTATA--------TCCGAGTTCTAGAAT----T----ACA----------TA----GCGAGCATACT-GGCGATTATTCATCGCTCGTGCG-ATTTGTTTTCAT----------------------------------------------------------------------------TCGTAAAAG-CAAGTAGCAATTAAAAAA----AA-CAAAAGCC---------------------C--GGC-----------TCGCTAGTCAAATGTATAAAAAGCTT------GGCCACCCA-GCCAGAACACTGCAAATCGCC----------------------------------------------G----------------CG-----GAGAGC-----------TATCAGAATC----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTCCGTTCCCGTTCCAGATC------CCG-------C----TCCCAAG--TTTCCAGT---------------TTCCAGCTGCAGCG-------C-----------------
droYak3 3R:13916911-13917248 + ACGTGACTGGCAAGAGGAA-CCCA-----C----AAT------------AACAA-----TTCCGA--------------------------AGACCGAGCGACGTGAGTAGACTT-------TGCCTTTATTGTTG---------ACAAGTTATA--------TCCGAGTTCTAGAAT----T----ACG----------TA----GCGAGCATACT-GGCGATTATTCATCGGTCGTGCG-ATTTGTTTTCAT----------------------------------------------------------------------------TCGAAAAAG-CAAGTAGCAATTAAAAAAAAAAAA-CAAAAGCG---------------------C--GGC-----------TCGCTAGTCAAATGTATAAAAAGCTT------GGCCACCCA-GCCAGAACACTGCAAAACGCC----------------------------------------------G----------------CT-----GAGAGC-----------TATCAGAATC----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTCCGTTCC------AGATC------CCG-------C----TCCCAAG--TTTCCAGT---------------TTCCAGCTGCAGCG-------C-----------------
droEug1 scf7180000409802:360331-360689 - ACGTGACTGGCAAAAGGAAA-CCA--------------------------ACAG-----TTCCCA----------------------------ACCGATCGACGTGAGTAGACTT-------TGACTTTATTGTTT---------TCGAGTTATA--------TCCGAGTTCTAGTAT----T----ACA----------TT----GCAATCATATT-GAAGATTATTCATCGGTCGTGCA-ATTTGTTTTCAT--CCAAGTAATATTTGTATATACATATGTATGTATGTATTTACTTAT----------------------------------------GTAC----ATGAA--------AA-CAAAAGCC---------------------C--GAT-----------CCGTTTGTTGAATGTATAAAAAGCTT------GGGCACCCA-GCAAGAACATTGCAAATCGAC----------------------------------------------A----------------TA-----GAGAGT-----------TATCAGAATC----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTCGGTTCCAGATC-CGATC------CCG-------C----ACCCAAG--TTTCCAGT---------------TTCCAGCTGCAGTG-------C-----------------
droBia1 scf7180000302402:2352432-2352742 + ACGTGACTGGCAAGAGGAAGCCC---------------------------------------------------------------------------ACGACGTGAGTAGACTT-------TGACTTTATTGCCG---------TCGAGTTATA--------TCCGAGTTCTAGTAT----T----ACA----------TT----GCGATCATACT-GGCGATTATTCATAGCTCGTGCA-TGTTGTTTTTGT--CCCCGTGGT------------------------------------------------------------------------TACCCTACAGCAATTAC--------AA-CAAAACCA---------------------C--TGT-----------GCGGTTGTCAAATGTATAAAAAGCTT------GACCACCCA-GCCAGAACACTGCAAATCACC----------------------------------------------A----------------TA-----GAGAGT-----------TATCAGAACC----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTCCGTTCC------AGATC------CCG-------C----TCCCAAG--TTTCCAGT---------------TTCCAGCTGCAGCG-------C-----------------
droTak1 scf7180000415380:450078-450392 + ACGTGACTGGCAAGAGGAAACCCA---------------------------CGA-----TTCCCA----------------------------ACCGAGCGACGTGAGTAGACTT-------TGCCTCTATTGTTT---------TCGAGTTATA--------TCCGAGTTCTAGTAT----T----ACA----------TT----GCGATCATACT-GGCGCTTATTCATCGCTCGTGCG-ATTTGTTTTCGC--CAAAGTAGT---------------------------------------------------------------------------ACTACAGCAATTAA--------AA-CAAAAGCC-----------------------------------------------GATTGTATAAAAAGCTT------GGCCACCCA-GCCAGAACATTGCAAATCGCT----------------------------------------------G----------------TC-----GAGAGT-----------TATCAGAACC----G---CT------------------CCTTATCGCCAGCTTTCGG----------------------------------TTCCGTTCC------AGATC------CCG-------C----TCCCCAT--TTTCCAGT---------------TTCCAGCTGCAGCG-------C-----------------
droEle1 scf7180000491047:1574779-1575065 - ACGTGACTGGCAAGAC--------------------------------------------TCCCA----------------------------ACTGAGCGACGTGAGTAGACTT-------TGCCTTTGTTGTTT---------ACGGTTTATATCCGAATATCCGAGTTCTAGTAT----T----ACA----------TT----GCGATCATACT-GGCGATTAATCATCGCTCGTCCG-ATTTGTATTCCA--CCAAGT---------------------------------------------------------------------------TGCCAAGTAACAATTAA--------AA-CAAAAGCC---------------------C--G-CTG---------GCGTTTGTTAAACGTATAAAAAGCTT------GGCCACCCA-GCCAGAACATTGCAAATCGCA--------------------------------------------CTA----------------TA-----GAGAGT-----------TATCAGAACC----G---CT------------------CCTTATCGCCTGTT---------------------------------------TTC---------------------------------------------------------------------------GCTGCAGCG-------C-----------------
droRho1 scf7180000780166:67339-67671 + ACGTGACTGGCAAGAGGAAACCCT---------------------------CAA-----TTCCCG----------------------------ACCGAGCGACGTGAGTAGACTT-------TGCTTTTGTTGTTG---------ACGGCTAATATCCGAA--TCCGAGTTCTAGTAT----T----ACA----------AT----GCGATCATATT-GGCGATTATTCATCGCTCGTGCG-ATTTGTTTTCGT--TTAAGT---------------------------------------------------------------------------AG-CAAGTAACAATTAA--------AA-CGAAAGCC---------------------C--G-CTG---------GCGGTTGTTAAATGTATATAAAGCTT------GACCACCCA-ACCAGAACATTGCAAATCGCC----------------------------------------------T----------------TA-----GAGAGT-----------TATCAGAACC----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTCGCTTCC------AGATC------CCG-------CTGTTTCCCAAG--TTTCCAGT---------------TTCCAGCTGCAGCG-------C-----------------
droFic1 scf7180000453912:114723-115043 + ACGTGACTGCCAATAGGAAACCCA---------------------------CAA-----CTCCCA----------------------------ACCGAGCGACGTGAGTAGACTT-------TGACTTTGTTGTTT---------ACGGGTTATA--------TCCGAGTTCTAGTAT----T----ACA----------TT----GTGATCATACTTTGCGATTATTCATCGCTCGTGCG-ATTTGGTTTCGT--CCAAGT---------------------------------------------------------------------------GG-CGAGCAGCAATTAA--------AA-CGAAAGCC---------------------C--GG----------------TTGTCAAATGTATAAAAAGCTT------GACCACCCA-GCTAGAACATTGCAAACCGCC----------------------------------------------C----------------CA-----GAGCGT-----------TATCAGAGCA----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTTCGTTCC------AGATC------CCG-------C----TCCCAAG--TCTCCAGT--------TTA----TTCCAGCTGCAGCG-------C-----------------
droKik1 scf7180000302255:205603-205967 - ACGTGACTGGCAAGAGGAAA-CCA-----G----AAT----------CCAGCGA-----ATCCCA----------------------------GC-CAGCGACGTGAGTAGACTT-------TGCCTTTGTTATTA------TTGTCAAGTTATA--------TCCGAGTTCTAGCGT----T----ACA----------CTG---GCGATCATACA-GGCGGTGAATAATCGTTCGTGCA-ATCTGGTTTCGT--CC-----------------------------------------------------------------------------------AATTAGCAATTA----------A-CAAAAGCC---------------------CCTG-GTGGCGTTCTCCTCGGGTGTA----GTATAAAAAGCTT------GGCCACCCAAGCCAGAGCATTGCAAATTGTTT---------------------------------------------A----------------TA-----GAGAGTGTTTTTTATTTTATCAGCAGC----G---CT------------------CCTTATCGCCAGCCACCCG--------------------------------CTTTCTGTTCC------AGATTCCGCGCCCGCTACCCAC---TTTCCAA---ATTCCAGT---------------TTCCAGTTGCAGCG-------C----------------T
droAna3 scaffold_13340:17933597-17933940 + ACGTGACTGGCAAGAGGAAATAT------------------------TT---GATCCAAG-------CGAGGTGAGGTG-----------------CGGCAACGTGAGTAGACTT-------TGCCTTTATTGTTG---------TT--TTTATA--------AATTGGGGCTACAAT----TCAGGGTA----------GT----GTGATCATACA-GGCGATTATTCATCGCTCGTGCA-ATTTGTTTTCGC----------------------------------------------------------------------------TCG----------CTTCCAATTTA---------A-CCAAAGTT---------------------C----------------TCGCTTCTCAAATGTATAA-AAGCTT------GGCCACCCA-GGCAGACCACTGCAAAGCGTC----------------------------------------------C----------------CA-----AAGCGT-----------TATCAATACC----G---TTCCAAGTGTTTGA-AGGCACCTTATCGCCACTT---------------------------------------TTTAGTTCC------AGATC------TCG-------C----TCCCAAG--CCCCCAGT---------------TTCCAGCTGCAATCCATCAAGC-----------------
droBip1 scf7180000396708:5443620-5443981 - ACGTGACTGGCAAGAAGAAATAT------------------------TT---GATCCAAG-------CGAGGTGAGGTG-----------------CGGTAACGTGAGTAGACCT-------TGCCTTTGTTGTTG---------T----TTTTATT------CCTATGTTGTT---TTTATT----ACAAATCGGTGAACTGTCTGTGATCATACA-GGCGATTATTCATCGCTCGTGCA-ATTTGTTGTCGT----------------------------------------------------------------------------TCGT----------TTCCAATTTA---------A-CCAAAGTT---------------------C----------------TCGCTTCTCAACTGTATAAAAGGTTG------GCCCTCCCA-AGCCGAGCAGTGCATAGCTTT----------------------------------------------C----------------CA-----GAGCGT-----------TATCAATACCAAGCG---TTCCAAGTGTTTGA-AGGCGTCTTATCGCCCCTT---------------------------------------TTTAGTTCC------AGATC------CCG-------C----TCCCAAGCGCTCCCAGT---------------TTCCAGCTGCAATCCGTTTAGC-----------------
dp5 2:15603794-15604223 + ACGTGACTGGCAAGTAGAAA-CTG--------------------------------------GCAAGCGAC-------------------------TTCCGACGTGAGTAGACTT-------TGCTTTTATTGTTG------T--AGCCTTTATT--------TGCAAGTTCTAGCAT----T----ACA----------TT----GTGGTCATTGA-AACCATTATTCATAGCTCGTGCA-ATTTGCTTT-GTGC-------------------------------------------CTGCACACTGCACACACACCCACCCATTCCTTCACAAATG-GAA---------------------------------------------------------------------------------GTATAAAAAGCTTCGGGACGGCCACCCA-AGCACATCATTGCAAATTGTTTGTTC---CATCGTCAAGGGATCGTTTTTGTCGGGGCTGGGCT-CTA----------------TA-----AAAAGT-----------TATCTC--------G----TGGAATTGTTTGACACACGCCTTATCACTCAGTTTCAGATAAGTTCTCGCGCCCGCACCAGCACCAGCAC----CAGCAGC------TGATC------CCA-------G----TTCCAA----TACCAGTACTCCGCTGCACTGT---------------ATGAAGTGATACCCAACTGTTG--
droPer2 scaffold_0:4808926-4809350 - ACGTGACTGGCAAGTAGAAA-CTG--------------------------------------GCAAGCGAC-------------------------TTCCGACGTGAGTAGACTT-------TGCTTTTATTGTTG------T--AGCCTTTATT--------TGCAAGTTCTAGCAT----T----ACA----------TT----GTGGTCATTGA-AACCATTATTCATAGCTCGTGCA-ATTTGCTTT-GTGC-------------------------------------------CTGCACACTGCACACACACCCACCCGTTCCTTCACAAATG-TAA---------------------------------------------------------------------------------GTATAAAAAGCTTCGGGACGGCCACCAA-AGCACATCATTGCAAATTGTTTGTTC---CATCGTCAAGGGATCGTTTTTGTCGGGGCTGGGCT-CTA----------------TA-----AAAAGT-----------TATCTC--------G----TGGAATTGTTTGACACACGCCTTATCACTCAGTTTCAGATAAGTTCTCGCACCCGCACCAGCACCAGCAG---------CC------TGATC------CCA-------G----TTCCCA----AACCAGTACTCCGCTGCACTGT---------------ATGAAGTGATACCCAACTGTTG--
droWil2 scf2_1100000004943:11062808-11062892 + ACCC-------------------A-----C----AAA-------CATTCAGCAA-----ATAAGA--------------------------AAAAATAGCGACGTGAGTAGACTT-------TATTCATATTCTCC---------A---AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAATTGTAACA--TTCAAG-----------------
droVir3 scaffold_12822:1590257-1590646 + ACGTGACTGGCAAGAGAATAGCCAAGCCAAAGCCAAGCGCCAAGTGTTT---GCGTT-TG-CTCA-----------GTG-----------------CAACGACGTGAGTAGAAGCCGGAGTGCAATATTATTGTTGTTATTGT--G------------------GCTACTGCTAAAAT----TTCAATTA----------T--------TGCATTCC-GACAATTAATCATAGGTCGTGGACAGTTGTTTGT-T-------------------------------------------------------------------------------------------------ATA---------A-ACAAAGGCGTCGCGTTGCGCGCTATATAA---AGG-------------------------------CCGCTT---GCTGCGCTGCAA-AATCAAACACA----ATCATTTGTGCTGTCAACG-----CAAACGTTTTCGTTAATAACAAGCAACAAATTAAAAAAGAACGAACAAGAATATAAGC-----------AAACATTATC----GG--CA------------------GCTTATCGCCA-CT---------------------------------------TCCAGTTCC------AG------------------------------T--ATTCCAGT--------GTAT---TTGCAATCTCAACG-------C------------ACGCC
droGri2 scaffold_14624:2631434-2631823 + ACGTGACTCGCAAGAGAATTGCCAT-------CCGATTGAAGTGTGTTT---GTTCTGTG-------CTCTGTGTGGTGTGTAAGAAAAAGAAAAAAAACGACGTGAGTAAAAGCCG-ACTGCACTTTTGTTATTG---------T--TATTATG--------TGCAAGGGACAGTTT----C----AAT----------TA----CAAAGCATTCC-AACGATTATTCATAGTTCGTGGGCAGCTATTGCGAG--CC--------------------------------------------------------------------------G--------------------------------------------CTT----CGC--------------------------------------TATAAAAGGCAACTGGTTTGAGTTGCA-TGCAAAACACAACAATTTGTGCAGT-TGCCAACGCGAAGTCTCCGTTCCTCTCAATAACAAACA-CAAA--------------ACA-----AAAATC-----------TATCACTATC----AGTGTG------------------CCTTATCGCTTT-T---------------------------------------GTTATTTCC------AGTCA------CCC-------A----TTCCAGA--ATTCCATT--------GTTTTATTTCAATATACAACA-------A-----------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACGTGACTGGCAAGAGGAA-CCCA-----C----AAT------------AACAA-----TTCCGA--------------------------AGACCGAGCGACGTGAGTAGACTT-------TGCCTTTATTGTTT---------ACAAGTTATA--------TCCGAGTTCTAGAAT----TACGTACA----------TA----GCGAGCATACT-GGCGATTATTCATCGCTCGTGCG-ATTTGTTTTCAT----------------------------------------------------------------------------TCGAAAAAG-CAAGTAGCAATTAAAAAAAA-AAA-CAAAAGCC---------------------C--GGC-----------TCGCTAGTAAAATGTATAAAAAGCTT------GGCCACCCA-GCCAGAACATTGCAAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------TATCACAATC----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTCCGTTCC------AGATC------CCG-------C----TCCCAAG--TTTCCAGT---------------TTCCAGCTGCAGCG-------C-----------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.CGTGACTGGCAAGAGGAA-CC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00211000000000000000
....................................................................................................................................GTTT---------ACAAGTTATA--------TCCGAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000000020000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------TATCAC.....................................................................................................................................................................................................2512.00200010000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------------------------------------------G----------------CG-----GAGAGC-----------TATCACAATC----G---CT------------------C....................................................................................................................................................................2412.00220000000000000000
.....................................................A-----TTCCGA--------------------------AGACCGAGCGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200000000002000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TTTCCAGT---------------TTCCAGCTG..............................1812.00220000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACATTGCAAATCGTC----------------------------------------------G----------------CG-----............................................................................................................................................................................................................................2111.00100000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAAG--TTTCCAGT---------------TTCCAGCTG..............................2311.00101000000000000000
...........................................................................................................................................................................CTAGAAT----TACGTACA----------TA----G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------TA.........................................................................................................................................................................................................1911.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------T..........................................................................................................................................................................................................2011.00110000000000000000
..................................................................................................................................TTGTTT---------ACAAGTTATA--------TCCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCGTC----------------------------------------------G----------------CG-----GAG.........................................................................................................................................................................................................................1911.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTGCAAATCGTC----------------------------------------------G----------------CG-----TT..........................................................................................................................................................................................................................2011.00100000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTGCAAATCGTC----------------------------------------------G----------------CG-----GAG.........................................................................................................................................................................................................................2111.00100000000010000000
.CGTGACTGGCAAGAGGAA-CCCA-----C----AAT------------AA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
.................................................................................................AGCGACGTGAGTAGACTT-------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-----------TATCACAATC----G---CT------------------CCTTATCGCC...........................................................................................................................................................2511.00100000100000000000
.......................................................................................................GTGAGTAGACTT-------TGCCTTTAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGCT---------------------------------------TTCCGTTCC------.................................................................................................1611.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATC----G---CT------------------CCTTATCGCCAGC........................................................................................................................................................2211.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----G---CT------------------CCTTATCGCCAGCC---------------------------------------................................................................................................................1811.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCGTC----------------------------------------------G----------------CG-----............................................................................................................................................................................................................................1611.00100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------T..........................................................................................................................................................................................................2311.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCGTC----------------------------------------------G----------------CG-----GA..........................................................................................................................................................................................................................1811.00110000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT---------------------------------------TTCCGTTCC------AGATC------CCG-------............................................................................1911.00101000000000000000
...........................................................TTCCGA--------------------------AGACCGAGCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000001000000000
..GTGACTGGCAAGAGGAA-CCCA-----C----AA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000000000
...............................................................................................CGAGCGACGTGAGTAGACTT-------T.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
droSec2
ACGTGACTGGCAAGAGGAA-CCCA-----C----AAT------------AACAA-----TTCCGA--------------------------AGACCGAGCGACGTGAGTAGACTT-------TGCCTTTATTGTTT---------ACAAGTTATA--------TCCGAGTTCTAGAAT----TACGTACA----------TA----GCGAGCATACT-GGCGATTATTCATCGCTCGTGCG-ATTTGTTTTCAT----------------------------------------------------------------------------TCGAAAAAG-CAAGTAGCAATTAAAAAAAAAAAA-CAAAAGTC---------------------C--GGC-----------TCGCTAGTAAAATGTATAAAAAGCTT------GGCCACCCA-GCCAGAACATTGAAAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------TATCACAATC----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTCCGTTCC------AGATC------CCG-------C----TCCCAAG--TTTCCAGT---------------TTCCAGCTGCAGCG-------C-----------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................AACAA-----TTCCGA--------------------------AGACCGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0021010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------TATCAC.....................................................................................................................................................................................................2311.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACAATC----G---CT------------------CCTTATCGCC...........................................................................................................................................................2211.0011000
.........................................................................................................................................................................................................................................CTCGTGCG-ATTTGTTTTCAT----------------------------------------------------------------------------T.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------TATCACAAT..................................................................................................................................................................................................2811.0010100
..................................................ACAA-----TTCCGA--------------------------AGACCGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...TGACTGGCAAGAGGAA-CCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC----G---CT------------------CCTTATCGCCAGC........................................................................................................................................................1911.0011000
...............................................................................................CGAGCGACGTGAGTAGACTT-------T.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
dm3
ACGTGACTGGCAAGAGGAA-CCCA-----C----AAT------------AACAA-----TTCCGA--------------------------AGACCGAGCGACGTGAGTAGACTT-------TGCCTTTATTGTTT---------ACAAGTTATA--------TCCGAGTTCTAGAAT----TACGTACA----------TA----GCGAGCATACT-GGCGATTATTCATCGCTCGTGCG-ATTTGTTTTCAT----------------------------------------------------------------------------TCGAAAACG-CAAGTAGCAATTAAAAAAAAAAAACCTAAAGCC---------------------C--GGC-----------TCGCTAGTAAAATGTATAAAAAGCTT------GGCCACCCA-GCCAGAACATTGCAAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------TATCACAATC----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTCCGTTCC------AGATC------CCG-------C----TCCCAAG--TTTCCAGT---------------TTCCAGCTGCAGCG-------C-----------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAATCGTC----------------------------------------------G----------------CG-----GAGAG.......................................................................................................................................................................................................................19110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------...........................................................................................................................................................................................................1918.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000101100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------TATC.......................................................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGC-----------TATCACAATC----G---C........................................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000100000000000000000000000000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAATC----G---CT------------------CCTTATCGCC...........................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCGTC----------------------------------------------G----------------CG-----GAGAG.......................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-----------TATCACAATC----G---CT------------------CCT..................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACATTGCAAATCGTC----------------------------------------------G----------------CG-----............................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000000000000000000
.CGTGACTGGCAAGAGGAA-CCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCGTC----------------------------------------------G----------------CG-----GAGAG.......................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------...........................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------TTCCGTTCC------AGATC------CCG-------C----TC.....................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------T..........................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------TATCAC.....................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
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......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATC----G---CT------------------CCTTATCGCCAGCT---------------------------------------................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACATTGCAAATCGTC----------------------------------------------G----------------CG-----G...........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATC----G---CT------------------CCTTATCGCCAGC........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------TATCACAAT..................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAACCTAAAGC........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGTTCC------AGATC------CCG-------C----TCC....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TAAAGCC---------------------C--GGC-----------TCGCTAGTAA.......................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AAT------------AACAA-----TTCCGA--------------------------AGACCGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CGTGACTGGCAAGAGGAA-CC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----G---CT------------------CCTTATCGCCAGCT---------------------------------------................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGC-----------TATCACAATC----G---CT------------------CCTTATCGCC...........................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAGT---------------TTCCAGCTGCAGCG-------C-----------------2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.....ACTGGCAAGAGGAA-CCCA-----C----AAT------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------TATCAC.....................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................GACCGAGCGACGTGAGTAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCGTC----------------------------------------------G----------------CG-----GAGAGC-----------ATC........................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----GAGAGC-----------TATCACAATC----G---CT------------------CCTTATCGC............................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC----------------------------------------------G----------------CG-----GAGAGC-----------TATCACAATC----.............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................A--------------------------AGACCGAGCGACGTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCT---------------------------------------TTCCGTTCC------AGATC------CCG-------C----.......................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------TATCACAATC----G---CT------------------CCTTAT...............................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................T------------AACAA-----TTCCGA--------------------------AGACCGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCC------AGATC------CCG-------C----TCCCAAG--..............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-----------TATCACAATC----G---CT------------------CCTTATCG.............................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTCCGTTCC------A................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................ACAA-----TTCCGA--------------------------AGACCGAGCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................CGA--------------------------AGACCGAGCGACGTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................AAT------------AACAA-----TTCCGA--------------------------AGACCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..................................................ACAA-----TTCCGA--------------------------AGACCGAGCGACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGAACATTGCAAATCGTC----------------------------------------------....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AAT------------AACAA-----TTCCGA--------------------------AGACCGAATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACGTGACTGGCAAGAGGAA-CCCA-----C----AAT------------AACAA-----TTCCGA--------------------------AGACCGAGCGACGTGAGTAGACTT-------TGCCTTTATTGTTG---------ACAAGTTATA--------TCCGAGTTCTAGAAT----T----ACA----------TA----GCGAGCATACT-GGCGATTATTCATCGCTCGTGCG-ATTTGTTTTCAT----------------------------------------------------------------------------TCGTAAAAG-CAAGTAGCAATTAAAAAA----AA-CAAAAGCC---------------------C--GGC-----------TCGCTAGTCAAATGTATAAAAAGCTT------GGCCACCCA-GCCAGAACACTGCAAATCGCC----------------------------------------------G----------------CG-----GAGAGC-----------TATCAGAATC----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTCCGTTCCCGTTCCAGATC------CCG-------C----TCCCAAG--TTTCCAGT---------------TTCCAGCTGCAGCG-------C-----------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTCCGTTC........................................................................................................2613.0030000003
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCGCC----------------------------------------------G----------------CG-----GAGAGC-----------TATCA......................................................................................................................................................................................................2412.0020000002
..................................AAT------------AACAA-----TTCCGA--------------------------AGACCGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000110
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAAATCGCC----------------------------------------------G----------------CG-----GAGAGC-----------TA.........................................................................................................................................................................................................2411.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCC----------------------------------------------G----------------CG-----GAGAGC-----------TATCAG.....................................................................................................................................................................................................2111.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCGCC----------------------------------------------G----------------CG-----GAGAGC-----------TATCAGA....................................................................................................................................................................................................2611.0010000001
.................................................AACAA-----TTCCGA--------------------------AGACCGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
...................................AT------------AACAA-----TTCCGA--------------------------AGACCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
droYak3
ACGTGACTGGCAAGAGGAA-CCCA-----C----AAT------------AACAA-----TTCCGA--------------------------AGACCGAGCGACGTGAGTAGACTT-------TGCCTTTATTGTTG---------ACAAGTTATA--------TCCGAGTTCTAGAAT----T----ACG----------TA----GCGAGCATACT-GGCGATTATTCATCGGTCGTGCG-ATTTGTTTTCAT----------------------------------------------------------------------------TCGAAAAAG-CAAGTAGCAATTAAAAAAAAAAAA-CAAAAGCG---------------------C--GGC-----------TCGCTAGTCAAATGTATAAAAAGCTT------GGCCACCCA-GCCAGAACACTGCAAAACGCC----------------------------------------------G----------------CT-----GAGAGC-----------TATCAGAATC----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTCCGTTCC------AGATC------CCG-------C----TCCCAAG--TTTCCAGT---------------TTCCAGCTGCAGCG-------C-----------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGCC----------------------------------------------G----------------CT-----GAGAGC-----------TATCAGAATC----G---.........................................................................................................................................................................................2715.00500000000005
...................................................CAA-----TTCCGA--------------------------AGACCGAGCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCC----------------------------------------------G----------------CT-----GAGAGC-----------TATCAG.....................................................................................................................................................................................................2011.00100000000001
...................................AT------------AACAA-----TTCCGA--------------------------AGACCGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..............................................................................................................................................................................................................................ATTATTCATCGGTCGTGCG-ATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.....................CCA-----C----AAT------------AACAA-----TTCCGA--------------------------AGACCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.CGTGACTGGCAAGAGGAA-CC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
droEug1
ACGTGACTGGCAAAAGGAAA-CCA--------------------------ACAG-----TTCCCA----------------------------ACCGATCGACGTGAGTAGACTT-------TGACTTTATTGTTT---------TCGAGTTATA--------TCCGAGTTCTAGTAT----T----ACA----------TT----GCAATCATATT-GAAGATTATTCATCGGTCGTGCA-ATTTGTTTTCAT--CCAAGTAATATTTGTATATACATATGTATGTATGTATTTACTTAT----------------------------------------GTAC----ATGAA--------AA-CAAAAGCC---------------------C--GAT-----------CCGTTTGTTGAATGTATAAAAAGCTT------GGGCACCCA-GCAAGAACATTGCAAATCGAC----------------------------------------------A----------------TA-----GAGAGT-----------TATCAGAATC----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTCGGTTCCAGATC-CGATC------CCG-------C----ACCCAAG--TTTCCAGT---------------TTCCAGCTGCAGTG-------C-----------------SizeHit CountTotal NormTotal
No Reads
droBia1
ACGTGACTGGCAAGAGGAAGCCC---------------------------------------------------------------------------ACGACGTGAGTAGACTT-------TGACTTTATTGCCG---------TCGAGTTATA--------TCCGAGTTCTAGTAT----T----ACA----------TT----GCGATCATACT-GGCGATTATTCATAGCTCGTGCA-TGTTGTTTTTGT--CCCCGTGGT------------------------------------------------------------------------TACCCTACAGCAATTAC--------AA-CAAAACCA---------------------C--TGT-----------GCGGTTGTCAAATGTATAAAAAGCTT------GACCACCCA-GCCAGAACACTGCAAATCACC----------------------------------------------A----------------TA-----GAGAGT-----------TATCAGAACC----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTCCGTTCC------AGATC------CCG-------C----TCCCAAG--TTTCCAGT---------------TTCCAGCTGCAGCG-------C-----------------SizeHit CountTotal NormTotal
No Reads
droTak1
ACGTGACTGGCAAGAGGAAACCCA---------------------------CGA-----TTCCCA----------------------------ACCGAGCGACGTGAGTAGACTT-------TGCCTCTATTGTTT---------TCGAGTTATA--------TCCGAGTTCTAGTAT----T----ACA----------TT----GCGATCATACT-GGCGCTTATTCATCGCTCGTGCG-ATTTGTTTTCGC--CAAAGTAGT---------------------------------------------------------------------------ACTACAGCAATTAA--------AA-CAAAAGCC-----------------------------------------------GATTGTATAAAAAGCTT------GGCCACCCA-GCCAGAACATTGCAAATCGCT----------------------------------------------G----------------TC-----GAGAGT-----------TATCAGAACC----G---CT------------------CCTTATCGCCAGCTTTCGG----------------------------------TTCCGTTCC------AGATC------CCG-------C----TCCCCAT--TTTCCAGT---------------TTCCAGCTGCAGCG-------C-----------------SizeHit CountTotal NormTotal
No Reads
droEle1
ACGTGACTGGCAAGAC--------------------------------------------TCCCA----------------------------ACTGAGCGACGTGAGTAGACTT-------TGCCTTTGTTGTTT---------ACGGTTTATATCCGAATATCCGAGTTCTAGTAT----T----ACA----------TT----GCGATCATACT-GGCGATTAATCATCGCTCGTCCG-ATTTGTATTCCA--CCAAGT---------------------------------------------------------------------------TGCCAAGTAACAATTAA--------AA-CAAAAGCC---------------------C--G-CTG---------GCGTTTGTTAAACGTATAAAAAGCTT------GGCCACCCA-GCCAGAACATTGCAAATCGCA--------------------------------------------CTA----------------TA-----GAGAGT-----------TATCAGAACC----G---CT------------------CCTTATCGCCTGTT---------------------------------------TTC---------------------------------------------------------------------------GCTGCAGCG-------C-----------------SizeHit CountTotal NormTotal
No Reads
droRho1
ACGTGACTGGCAAGAGGAAACCCT---------------------------CAA-----TTCCCG----------------------------ACCGAGCGACGTGAGTAGACTT-------TGCTTTTGTTGTTG---------ACGGCTAATATCCGAA--TCCGAGTTCTAGTAT----T----ACA----------AT----GCGATCATATT-GGCGATTATTCATCGCTCGTGCG-ATTTGTTTTCGT--TTAAGT---------------------------------------------------------------------------AG-CAAGTAACAATTAA--------AA-CGAAAGCC---------------------C--G-CTG---------GCGGTTGTTAAATGTATATAAAGCTT------GACCACCCA-ACCAGAACATTGCAAATCGCC----------------------------------------------T----------------TA-----GAGAGT-----------TATCAGAACC----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTCGCTTCC------AGATC------CCG-------CTGTTTCCCAAG--TTTCCAGT---------------TTCCAGCTGCAGCG-------C-----------------SizeHit CountTotal NormTotal
No Reads
droFic1
ACGTGACTGCCAATAGGAAACCCA---------------------------CAA-----CTCCCA----------------------------ACCGAGCGACGTGAGTAGACTT-------TGACTTTGTTGTTT---------ACGGGTTATA--------TCCGAGTTCTAGTAT----T----ACA----------TT----GTGATCATACTTTGCGATTATTCATCGCTCGTGCG-ATTTGGTTTCGT--CCAAGT---------------------------------------------------------------------------GG-CGAGCAGCAATTAA--------AA-CGAAAGCC---------------------C--GG----------------TTGTCAAATGTATAAAAAGCTT------GACCACCCA-GCTAGAACATTGCAAACCGCC----------------------------------------------C----------------CA-----GAGCGT-----------TATCAGAGCA----G---CT------------------CCTTATCGCCAGCT---------------------------------------TTTCGTTCC------AGATC------CCG-------C----TCCCAAG--TCTCCAGT--------TTA----TTCCAGCTGCAGCG-------C-----------------SizeHit CountTotal NormTotal
No Reads
droKik1
ACGTGACTGGCAAGAGGAAA-CCA-----G----AAT----------CCAGCGA-----ATCCCA----------------------------GC-CAGCGACGTGAGTAGACTT-------TGCCTTTGTTATTA------TTGTCAAGTTATA--------TCCGAGTTCTAGCGT----T----ACA----------CTG---GCGATCATACA-GGCGGTGAATAATCGTTCGTGCA-ATCTGGTTTCGT--CC-----------------------------------------------------------------------------------AATTAGCAATTA----------A-CAAAAGCC---------------------CCTG-GTGGCGTTCTCCTCGGGTGTA----GTATAAAAAGCTT------GGCCACCCAAGCCAGAGCATTGCAAATTGTTT---------------------------------------------A----------------TA-----GAGAGTGTTTTTTATTTTATCAGCAGC----G---CT------------------CCTTATCGCCAGCCACCCG--------------------------------CTTTCTGTTCC------AGATTCCGCGCCCGCTACCCAC---TTTCCAA---ATTCCAGT---------------TTCCAGTTGCAGCG-------C----------------TSizeHit CountTotal NormTotal
No Reads
droAna3
ACGTGACTGGCAAGAGGAAATAT------------------------TT---GATCCAAG-------CGAGGTGAGGTG-----------------CGGCAACGTGAGTAGACTT-------TGCCTTTATTGTTG---------TT--TTTATA--------AATTGGGGCTACAAT----TCAGGGTA----------GT----GTGATCATACA-GGCGATTATTCATCGCTCGTGCA-ATTTGTTTTCGC----------------------------------------------------------------------------TCG----------CTTCCAATTTA---------A-CCAAAGTT---------------------C----------------TCGCTTCTCAAATGTATAA-AAGCTT------GGCCACCCA-GGCAGACCACTGCAAAGCGTC----------------------------------------------C----------------CA-----AAGCGT-----------TATCAATACC----G---TTCCAAGTGTTTGA-AGGCACCTTATCGCCACTT---------------------------------------TTTAGTTCC------AGATC------TCG-------C----TCCCAAG--CCCCCAGT---------------TTCCAGCTGCAATCCATCAAGC-----------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................TGGGGCTACAAT----TCAGGGTA----------G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droBip1
ACGTGACTGGCAAGAAGAAATAT------------------------TT---GATCCAAG-------CGAGGTGAGGTG-----------------CGGTAACGTGAGTAGACCT-------TGCCTTTGTTGTTG---------T----TTTTATT------CCTATGTTGTT---TTTATT----ACAAATCGGTGAACTGTCTGTGATCATACA-GGCGATTATTCATCGCTCGTGCA-ATTTGTTGTCGT----------------------------------------------------------------------------TCGT----------TTCCAATTTA---------A-CCAAAGTT---------------------C----------------TCGCTTCTCAACTGTATAAAAGGTTG------GCCCTCCCA-AGCCGAGCAGTGCATAGCTTT----------------------------------------------C----------------CA-----GAGCGT-----------TATCAATACCAAGCG---TTCCAAGTGTTTGA-AGGCGTCTTATCGCCCCTT---------------------------------------TTTAGTTCC------AGATC------CCG-------C----TCCCAAGCGCTCCCAGT---------------TTCCAGCTGCAATCCGTTTAGC-----------------SizeHit CountTotal NormTotal
No Reads
dp5
ACGTGACTGGCAAGTAGAAA-CTG--------------------------------------GCAAGCGAC-------------------------TTCCGACGTGAGTAGACTT-------TGCTTTTATTGTTG------T--AGCCTTTATT--------TGCAAGTTCTAGCAT----T----ACA----------TT----GTGGTCATTGA-AACCATTATTCATAGCTCGTGCA-ATTTGCTTT-GTGC-------------------------------------------CTGCACACTGCACACACACCCACCCATTCCTTCACAAATG-GAA---------------------------------------------------------------------------------GTATAAAAAGCTTCGGGACGGCCACCCA-AGCACATCATTGCAAATTGTTTGTTC---CATCGTCAAGGGATCGTTTTTGTCGGGGCTGGGCT-CTA----------------TA-----AAAAGT-----------TATCTC--------G----TGGAATTGTTTGACACACGCCTTATCACTCAGTTTCAGATAAGTTCTCGCGCCCGCACCAGCACCAGCAC----CAGCAGC------TGATC------CCA-------G----TTCCAA----TACCAGTACTCCGCTGCACTGT---------------ATGAAGTGATACCCAACTGTTG--SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGATCGTTTTTGTCGGG...............................................................................................................................................................................................................................................................2115.0050000000050
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAATTGTTTGACACACGC....................................................................................................................................................................2014.0040000000040
.................................................................................................................................................................................T----T----ACA----------TT----GTGGTCATTGA-AAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000040
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGGATCGTTTTTGTCGG................................................................................................................................................................................................................................................................1914.0040000000040
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------TA-----AAAAGT-----------TATCTC--------G----TGGA....................................................................................................................................................................................2013.0030000011010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGGGATCGTTTTTGTCGG................................................................................................................................................................................................................................................................2113.0030000010020
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTGTTC---CATCGTCAAGGG..............................................................................................................................................................................................................................................................................2113.0030000000030
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC--------G----TGGAATTGTTTGACACAC......................................................................................................................................................................2113.0030000000030
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGT-----------TATCTC--------G----TGGAATTG................................................................................................................................................................................2113.0030000000030
..........................................................................................................................................................................................................................AACCATTATTCATAGCTCGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000001020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTTC---CATCGTCAAGGG..............................................................................................................................................................................................................................................................................2013.0030000001020
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTC--------G----TGGAATTGTTTGACAC........................................................................................................................................................................2112.0020000001010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGATCGTTTTTGTCGGGGC.............................................................................................................................................................................................................................................................2112.0020000000020
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGATCGTTTTTGTCGG................................................................................................................................................................................................................................................................2012.0020000000020
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTTGTTC---CATCGTCAA.................................................................................................................................................................................................................................................................................2012.0020000000020
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGATCGTTTTTGTCG.................................................................................................................................................................................................................................................................1912.0020000000020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGGGATCGTTTTTGTCGGG...............................................................................................................................................................................................................................................................2212.0020000000200
..............................................................................................................................................................................................................................................................................................................................................AAATG-GAA---------------------------------------------------------------------------------GTATAAAAAGCTT.......................................................................................................................................................................................................................................................................................................................................2112.0020000002000
.CGTGACTGGCAAGTAGAAA-CTG--------------------------------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000002
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-----------TATCTC--------G----TGGAATTGTTTG............................................................................................................................................................................2112.0020000001010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGCTGCACTGT---------------ATGAA...................1912.0020000000020
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAAAAGCTTCGGGACGG...............................................................................................................................................................................................................................................................................................................................2012.0020000000020
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCTGCACTGT---------------ATGAAGTGATACC...........2612.0020200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACTGT---------------ATGAAGTGATACCCAACTG.....2711.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCGTTTTTGTCGGGG..............................................................................................................................................................................................................................................................1811.0010000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTTTGTCGGGGCTGGGC........................................................................................................................................................................................................................................................2011.0010000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-----AAAAGT-----------TATCTC--------G----TGGAA...................................................................................................................................................................................2011.0010000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----TGGAATTGTTTGACACACG.....................................................................................................................................................................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----AAAAGT-----------TATCTC--------G----TGGAATT.................................................................................................................................................................................2111.0010000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTGTCGGGGCTGGGCT-CTA----------------TA-----AA..........................................................................................................................................................................................................................2711.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTGTCGGGGCTGGGCT-C.....................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGTCAAGGGATCGTTTT......................................................................................................................................................................................................................................................................2011.0010000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGATAAGTTCTCGCGCCC..................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGGGATCGTTTTTGTCGG................................................................................................................................................................................................................................................................2211.0010000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTTTGTTC---CATCGTCAAGGGA.............................................................................................................................................................................................................................................................................2511.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC--------G----TGGAATTGTTTGACACACG.....................................................................................................................................................................2211.0010000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGCACTGT---------------ATGAAGTGA...............2011.0011000000000
...........AAGTAGAAA-CTG--------------------------------------GCAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGCCTTATCACTCAGTT......................................................................................................................................................2011.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGTACTCCGCTGCACTGT---------------ATG.....................2411.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC--------G----TGGAATTGTTTGAC..........................................................................................................................................................................1811.0010000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCTGGGCT-CTA----------------TA-----AAAAG.......................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCA-------G----TTCCAA----TACCAGTACTCCGCTGCA...........................................2811.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGTTTTTGTCGGGGCTGG..........................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCTGCACTGT---------------ATGAAGTG................2111.0010000000010
..................................................................................................................................................GCCTTTATT--------TGCAAGTTCTAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTCGGGGCTGGGCT-C.....................................................................................................................................................................................................................................................2011.0010000000010
...............AGAAA-CTG--------------------------------------GCAAGCGAC-------------------------TTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
ACGTGACTGGCAAGTAGAAA-CTG--------------------------------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTC---CATCGTCAAGGGAT............................................................................................................................................................................................................................................................................2111.0011000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA----TACCAGTACTCCGCTGCAC..........................................2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTGTCGGGGCTGGGCT-......................................................................................................................................................................................................................................................2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTTTTTGTCGGGGCTT...........................................................................................................................................................................................................................................................1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGATCGTTTTTGTCGG................................................................................................................................................................................................................................................................1811.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCTGCACTGT---------------ATGAAGTGATACCCA.........2811.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTTCTCGCGCCCGCACCAGCAC........................................................................................................................2511.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTCGGGGCTGGGCT-CTA----------------T..................................................................................................................................................................................................................................2111.0010000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTC---CATCGTCAAGGGAT............................................................................................................................................................................................................................................................................1811.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGATCGTTTTTGTCGGG...............................................................................................................................................................................................................................................................1911.0010000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCAGCAC----CAGCAGC------TGATC------......................................................................................2211.0010000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCTTCGGGACGGTT.............................................................................................................................................................................................................................................................................................................................1811.0010000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCTTCGGGACGGCCACCC.........................................................................................................................................................................................................................................................................................................................2011.0010000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGCTTCGGGACGGCCAC...........................................................................................................................................................................................................................................................................................................................2111.0010000000010
.....ACTGGCAAGTAGAAA-CTG--------------------------------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----TACCAGTACTCCGCTGCACT.........................................2111.0010100000000
...........AAGTAGAAA-CTG--------------------------------------GCAAGCGAC-------------------------TTCCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGGCT-CTA----------------TA-----AAAAGT-----------TAT........................................................................................................................................................................................................2211.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAAGCTTCGGGACGGCC.............................................................................................................................................................................................................................................................................................................................2011.0010000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTTGTTC---CATCGTCAAG................................................................................................................................................................................................................................................................................2111.0011000000000
...............................................................................................................................................................................CAT----T----ACA----------TT----GTGGTCATTGA-A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTTTGTCGGGGCTGG..........................................................................................................................................................................................................................................................1811.0010000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-----------TATCTC--------G----TGGAATTGTTTGACA.........................................................................................................................................................................2411.0010100000000
...TGACTGGCAAGTAGAAA-CTG--------------------------------------GCAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000100
..............................................................................................................................................................................................................................ATTATTCATAGCTCGTGCA-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTA----------------TA-----AAAAGT-----------TATCTC--------G----TGG.....................................................................................................................................................................................2111.0010100000000
........GGCAAGTAGAAA-CTG--------------------------------------GCAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-----AAAAGT-----------TATCTC--------G----TGGAAT..................................................................................................................................................................................2111.0010000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAAAGCTTCGGGACGG...............................................................................................................................................................................................................................................................................................................................1911.0010000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGTTTTTGTCGGGGC.............................................................................................................................................................................................................................................................1811.0010000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTC--------G----TGGAATTGTTTGAC..........................................................................................................................................................................2111.0010000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTGACACACGCCTTATCACT...........................................................................................................................................................2411.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTTCTCGCGCCCGCACCAGCACCA......................................................................................................................2711.0010100000000
ACGTGACTGGCAAGTAGAAA-CTG--------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGATCGTTTTTGTCGGGG..............................................................................................................................................................................................................................................................2011.0010000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAATTGTTTGACACACGCC...................................................................................................................................................................2111.0010000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTC---CATCGTCAAGGGATCG..........................................................................................................................................................................................................................................................................2111.0010000000010
droPer2
ACGTGACTGGCAAGTAGAAA-CTG--------------------------------------GCAAGCGAC-------------------------TTCCGACGTGAGTAGACTT-------TGCTTTTATTGTTG------T--AGCCTTTATT--------TGCAAGTTCTAGCAT----T----ACA----------TT----GTGGTCATTGA-AACCATTATTCATAGCTCGTGCA-ATTTGCTTT-GTGC-------------------------------------------CTGCACACTGCACACACACCCACCCGTTCCTTCACAAATG-TAA---------------------------------------------------------------------------------GTATAAAAAGCTTCGGGACGGCCACCAA-AGCACATCATTGCAAATTGTTTGTTC---CATCGTCAAGGGATCGTTTTTGTCGGGGCTGGGCT-CTA----------------TA-----AAAAGT-----------TATCTC--------G----TGGAATTGTTTGACACACGCCTTATCACTCAGTTTCAGATAAGTTCTCGCACCCGCACCAGCACCAGCAG---------CC------TGATC------CCA-------G----TTCCCA----AACCAGTACTCCGCTGCACTGT---------------ATGAAGTGATACCCAACTGTTG--SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............GTAGAAA-CTG--------------------------------------GCAAGCGAC-------------------------TTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.005500000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGT-----------TATCTC--------G----TGGAATTGTTTGAC..........................................................................................................................................................................2513.003300000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTC--------G----TGGAATTGTTTGAC..........................................................................................................................................................................2012.002200000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGCTGCACTGT---------------ATGAAG..................2012.002200000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTTC---CATCGTCAAGGGATC...........................................................................................................................................................................................................................................................................2312.002000002
...........AAGTAGAAA-CTG--------------------------------------GCAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC--------G----TGGAATTGTTTGAC..........................................................................................................................................................................1811.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTGTTC---CATCGTCAAGGGAT............................................................................................................................................................................................................................................................................2311.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCCGCTGCACTGT---------------ATGAAGTGATACCC..........2911.001100000
.................................................................................................................................................................................T----T----ACA----------TT----GTGGTCATTGA-AA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGT-----------TATCTC--------G----TGGAATTGTTTGA...........................................................................................................................................................................2511.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATAAGTTCTCGCACCCGCACCAG...........................................................................................................................2611.001010000
ACGTGACTGGCAAGTAGAAA-CT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGATAAGTTCTCGCACCC..................................................................................................................................2111.001100000
....GACTGGCAAGTAGAAA-CTG--------------------------------------GCAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTGT---------------ATGAAGTGATACCCAACTG.....2611.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTCGCACCCGCACCAGCACC.......................................................................................................................2311.001001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTTTCAGATAAGTTCTCGCACC...................................................................................................................................2511.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTGTCGGGGCTGGGC........................................................................................................................................................................................................................................................1911.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------TA-----AAAAGT-----------TATCTC--------G----TGG.....................................................................................................................................................................................1911.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCCGCTGCACTGT---------------ATGAAGT.................2311.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTC---CATCGTCAAGGGATCG..........................................................................................................................................................................................................................................................................2011.001000100
droWil2
ACCC-------------------A-----C----AAA-------CATTCAGCAA-----ATAAGA--------------------------AAAAATAGCGACGTGAGTAGACTT-------TATTCATATTCTCC---------A---AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAATTGTAACA--TTCAAG-----------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................AAGA--------------------------AAAAATAGCGACGTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
...............................................................................................ATAGCGACGTGAGTAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
droVir3
ACGTGACTGGCAAGAGAATAGCCAAGCCAAAGCCAAGCGCCAAGTGTTT---GCGTT-TG-CTCA-----------GTG-----------------CAACGACGTGAGTAGAAGCCGGAGTGCAATATTATTGTTGTTATTGT--G------------------GCTACTGCTAAAAT----TTCAATTA----------T--------TGCATTCC-GACAATTAATCATAGGTCGTGGACAGTTGTTTGT-T-------------------------------------------------------------------------------------------------ATA---------A-ACAAAGGCGTCGCGTTGCGCGCTATATAA---AGG-------------------------------CCGCTT---GCTGCGCTGCAA-AATCAAACACA----ATCATTTGTGCTGTCAACG-----CAAACGTTTTCGTTAATAACAAGCAACAAATTAAAAAAGAACGAACAAGAATATAAGC-----------AAACATTATC----GG--CA------------------GCTTATCGCCA-CT---------------------------------------TCCAGTTCC------AG------------------------------T--ATTCCAGT--------GTAT---TTGCAATCTCAACG-------C------------ACGCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC----GG--CA------------------GCTTATCGCCA-CT---------------------------------------TCCAGT..........................................................................................................2613.003000000000000000000000000000000000000000000000000000000000000003
.....................................................................................................................................................................................................................................ATAGGTCGTGGACAGTTGTTTGT-T-------------------------------------------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................2412.002000000000200000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCTGTCAACG-----CAAACGTTTT......................................................................................................................................................................................................................................................................2312.002001000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGCTGTCAACG-----CAAACGTT........................................................................................................................................................................................................................................................................2212.002000000000000000000000000000001010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTGTGCTGTCAACG-----CA..............................................................................................................................................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000002
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCC------AG------------------------------T--ATTCCAGT--------GTA...........................................2111.001000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---TTGCAATCTCAACG-------C------------ACGCC2111.001000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGC-----------AAACATTATC----GG--CA------------------GC...................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGCTGTCAACG-----CAAAC...........................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTGTCAACG-----CAAACGTTTT......................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACA----ATCATTTGTGCTGTCAACG-----CA..............................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
....................................GCGCCAAGTGTTT---GCGTT-TG-CTCA-----------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................A-ACAAAGGCGTCGCGTTGCGC...........................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000100000000000000000000000000000
............................AAAGCCAAGCGCCAAGTGTTT---G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGTTTTCGTTAATAACAAGCAACA....................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...............................................................CA-----------GTG-----------------CAACGACGTGAGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------------------T--ATTCCAGT--------GTAT---TTGCAATCTCAAC..........................2711.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTCGTTAATAACAAGCAACA....................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------TCCAGTTCC------AG------------------------------T--ATTCCA........................................................1911.001000000000000000000000000000000000001000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAGC-----------AAACATTATC----GG--CA------------------GC...................................................................................................................................................................2311.001000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACGTTTTCGTTAATAACAAGC........................................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGC-----------AAACATTATC----GG--CA------------------GCT..................................................................................................................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCTGTCAACG-----CAAACGTT........................................................................................................................................................................................................................................................................2111.001000000000000000000010000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGTTCC------AG------------------------------T--ATTCCAGT--------GTA...........................................2311.001001000000000000000000000000000000000000000000000000000000000000
..............................................TTT---GCGTT-TG-CTCA-----------GTG-----------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000001000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-CT---------------------------------------TCCAGTTCC------AG------------------------------T--ATTCCAGT--------GTA...........................................2711.001000000000000000000000000000001000000000000000000000000000000000
........................................................T-TG-CTCA-----------GTG-----------------CAACGACGTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAAAAGAACGAACAAG...............................................................................................................................................................................................................................1911.001000000000000000000000001000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACGTTTTCGTTAATAACAAGCA.......................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGC-----------AAACATTATC----GG--CA------------------G....................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATC----GG--CA------------------GCTTATCGC............................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
.............................................................................................................AGAAGCCGGAGTGCAATATTATTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--ATTCCAGT--------GTAT---TTGCAATC...............................2111.001000000000000000000000000000000000000000100000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC----GG--CA------------------GCTTATCGCCA-CT---------------------------------------TCCAGTTC........................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATTTGTGCTGTCAAC......................................................................................................................................................................................................................................................................................1811.001000000100000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAACG-----CAAACGTTTTCGTTAA................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000100000000000000000000000000000000
..........................................................................................................AGTAGAAGCCGGAGTGCAATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAGC-----------AAACATTATC----GG--CA------------------GCTTAT...............................................................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTATC----GG--CA------------------GCTTATCGCCA-CT---------------------------------------................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCC------AG------------------------------T--ATTCCAGT--------GTAT---TT.....................................2111.001000000000000000000000000000000010000000000000000000000000000000
......................................GCCAAGTGTTT---GCGTT-TG-CTCA-----------GTG-----------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAT---TTGCAATCTCAACG-------C------------A....2011.001000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCC------AG------------------------------T--ATTCCAGT--------..............................................1711.001000000000000000000000000000000000000000000000000000000000000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACACA----ATCATTTGTGCTGTC.........................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA----ATCATTTGTGCTGTCAACG-----................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................CCAAAGCCAAGCGCCAAGTGTTT---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000100000000000000000000000000000
droGri2
ACGTGACTCGCAAGAGAATTGCCAT-------CCGATTGAAGTGTGTTT---GTTCTGTG-------CTCTGTGTGGTGTGTAAGAAAAAGAAAAAAAACGACGTGAGTAAAAGCCG-ACTGCACTTTTGTTATTG---------T--TATTATG--------TGCAAGGGACAGTTT----C----AAT----------TA----CAAAGCATTCC-AACGATTATTCATAGTTCGTGGGCAGCTATTGCGAG--CC--------------------------------------------------------------------------G--------------------------------------------CTT----CGC--------------------------------------TATAAAAGGCAACTGGTTTGAGTTGCA-TGCAAAACACAACAATTTGTGCAGT-TGCCAACGCGAAGTCTCCGTTCCTCTCAATAACAAACA-CAAA--------------ACA-----AAAATC-----------TATCACTATC----AGTGTG------------------CCTTATCGCTTT-T---------------------------------------GTTATTTCC------AGTCA------CCC-------A----TTCCAGA--ATTCCATT--------GTTTTATTTCAATATACAACA-------A-----------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATC-----------TATCACTATC----AGTGTG------------------CCTTATC..............................................................................................................................................................2711.00110

Generated: 05/18/2015 at 10:24 AM