ID:

dsi_30956

 Coordinate:

3r:20688215-20688364 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-1.24 -1.2 -1.1

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
(TTG)nSimple_repeatSimple_repeat+

Sense Strand Reads

TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCCTTACTCTTTTTTATGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCAACGACAACAACAACAAGAACAACATTATCAAATGCATTAGATAATTTAGTAACAAATGACGGTAAAAAAAAAGAAAAGAAAATTGGCAACAGCAAAGAAACAAAATTGAACTGTGTAAAGAACGAAAAACCGAAATGAGA
******************************************************************************************...........................................((((((..........)))))).....****************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 M023
head
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
.............................................................................................................................................................AGTAACAAATGACGGTCAAAAAAA..................................................................... 24 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GAACTGTGTAAAGAACGA............... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...............................AGCGATCGCAAGTGCT........................................................................................................................................................................................................... 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................ATTGGCAACAGCAAAGAAA........................................ 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................AAAGAACGAAAAACCGAAAT.... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................TCTAAACTTTAAACATGCC............................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AGCAAAGAAACAAAATTGAACTGT.......................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................AACATGCCAACGACAACAACAACAAGAT......................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................ATGACGGTTGAAAAAAAGAAAA............................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...................................ATCGCAAGTGCTTAGGTTTGTC................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................TATCAAATGCATTAGATAATTTAGT.......................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
......................................................................ATGATCATGCAAGTCTTCTT................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................CACAAAGGACGGTAAAAAAA...................................................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................................GTAAAAAAAAAGAAGAGAAAA.......................................................... 21 1 2 0.50 1 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................................................TAATGACGGTAAAAAAAAAAAAAA............................................................... 24 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................TGACGGGAAAAAAAAATAAAA............................................................... 21 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................TGACGGTAAAAAAAAAAAAAAA.............................................................. 22 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TGCGGTAAAAAAAAAGAAAA............................................................... 20 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................TGACGGTAAAACATAAAAAAA............................................................... 21 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0
...............................AGCGATCGCAAGAGC............................................................................................................................................................................................................ 15 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................AAAAAAAAGAAAAGA............................................................. 15 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

AGTGTCGTTGTGGCGGCGCACGGAATTCACCTCGCTAGCGTTCACGAATCCAAACAGGAATGAGAAAAAATACTAGTACGTTCAGAAGAAAGATTTGAAATTTGTACGGTTGCTGTTGTTGTTGTTCTTGTTGTAATAGTTTACGTAATCTATTAAATCATTGTTTACTGCCATTTTTTTTTCTTTTCTTTTAACCGTTGTCGTTTCTTTGTTTTAACTTGACACATTTCTTGCTTTTTGGCTTTACTCT
******************************************************************************************...........................................((((((..........)))))).....****************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M024
male body		 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
........................................................................................................................................................TTAAGTCATTGGGTACTGCC.............................................................................. 20 3 2 3.50 7 4 2 1 0 0 0
.........................................................................................................................................................TAAGTCATTGGGTACTGCC.............................................................................. 19 3 7 0.57 4 4 0 0 0 0 0
.......TTGTGGCGGCGCCCGG................................................................................................................................................................................................................................... 16 1 4 0.25 1 0 0 0 1 0 0
......................................................................................................TGTGCGGTTGCTGTTGT................................................................................................................................... 17 1 6 0.17 1 0 0 0 0 1 0
....TCGTTGTCGCGGCGC....................................................................................................................................................................................................................................... 15 1 15 0.07 1 0 0 0 0 0 1
.......................................................................................................................................................................CTGCCCTTCTTTTTTCTTTTG.............................................................. 21 3 18 0.06 1 0 0 0 0 1 0
............................................................................................................................................................................................................................GGCACACTTCTTGCTT.............. 16 2 20 0.05 1 0 0 0 0 0 1
.........................................................................................................................................................TAAGTCATTGCGTACTGC............................................................................... 18 3 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:20688165-20688414 - dsi_30956 TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTATGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAAGA------A------CAACATTATCAAATGCATTAGATAATTTAGTAAC--------A----------AATGA----CGGTAAAAAAAAAGAAA----A-----------------------------GAAAATTGGCAACAGCAAAGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AAATGAGA-----
droSec2 scaffold_33:431682-431936 - dse_1230 TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTATGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAAGAACAAGAA------CAACATTATCAAATGCATTAGATAATTTAGTAAC--------A----------AATGA----CGGTAAAA-AAAAGAAA----A-----------------------------GCTAATTGGCAACAGCAAAGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AAATGAGA-----
dm3 chr3R:21177633-21177888 - TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTATGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAAGAACAAAAA------CAACATTATCAAATGCATTAGATAATTTAGTAAC--------A----------AATGA----CGGTAAAAAAAAAGAAA----A-----------------------------GAAAATCGGCAACAGCAAAGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AAATGAGA-----
droEre2 scaffold_4820:6869211-6869461 + TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTATGATCTTGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAAGAACAAGAA------CAACATTATCAAATGCATTAGATAATTTAGTAAC--------A----------AATGA----CGGACAAA-CATT--------------------------------------GAAAATTGGCACCAGAAAAGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A----------------------------------------------------------------------------GAA-CCG-------AAATGAGA-----
droYak3 3R:25315382-25315641 + TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTATGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAAGAACAACAA------GA---ACATCAAATGCATTAGATAATTTAGTAAC--------A----------AATGA----CGGAA------AAGAGAAAACA-----------------------------GAAAATTGGCAACAGAAAAGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A--------------------------------------------------------------------AAAAAAAGGAA-CCG-------AAATGAGA-----
droEug1 scf7180000409692:200793-201057 + TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTATGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAAGAACAACAA------CAACATTATCAAATGCATTAGATAATTTAGTAAC--------A----------AATGAAAA----AA------AAGAACAAACA-----AAAAA---------------AAACATAAATTGGCAACCGAAGAGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A--------------------------------------------------------------------A-------AAA-CCG-------AAATGAGA-----
droBia1 scf7180000302136:1997265-1997506 - TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---CTACTCTTTTTTATGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAACAACAAGAA------CAACATTATCAAATGCATTAGATAATTTAGCAAT--------A----------AACAAAAGAC---------------------------------------------------GAAATTGGCAACAGACAAGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AAATGAGA-----
droTak1 scf7180000415257:13022-13269 - TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTATGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAAGAACAAGAA------CAACATTATCAAATGCATTAGATAATTTAGCAAT--------A----------AATTAAAA------------AAGAGA----A-----------------------------AGAAATCAGCAACAGACAAGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AAATGAGA-----
droEle1 scf7180000491212:549682-549923 - TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTACGATCATGCAAGTCTTCTTCCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAAGA------A------TAACATAATTAAATGTATTAGATAATTTAGCAATTAACTAAAA----------AATGA----G---------------------------------------------------GAAATTGGCAACAGAAAAGAAACAAAATT--------------------------G-AACTGTGTGTAAAAAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AAAGAAGA-----
droRho1 scf7180000779365:64696-64931 + TCACAGGAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTACGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACTACAAGA------A------CAACATTATTAAATGCATTAGATAATTTAGCAAT--------T----------ATTTAAAGAG---------------------------------------------------GAAATTGGCAACAGAAAAGAAACAAAATT--------------------------G-AACTATGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CGG-------AAAGGAGA-----
droFic1 scf7180000454055:1094971-1095206 - TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTACGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAAGAACAAGAA---------CATTATCAAATGCATTAGATAATTTAGCAAC--------A----------AATGAAAGAC---------------------------------------------------GAAATTGGCAACAGAAAAGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------G------A-----------------------------------------------------------------------------AGTCCG-------A----AGA-----
droKik1 scf7180000302355:1333658-1333929 + TCATAGCAATACCGCTGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTACGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACGATAACAACAACAACAAGAACAAGAA------CAACAT---------CATTAGATAATTTAGCAAC--------A----------AACGAGAGTC---------------------------------------------GAAG-GAAAATTGGCAACAGCAAAGAAACAAAATT--------------------------G-AACTGTAT--AAGAAAA--------------------A---------------------TGTGTAAAAGA-------------------------ATCGGGAAATGGCAAGA---------AA-AGA-GAGAGAGACAGAGA-----
droAna3 scaffold_13340:9291433-9291669 + --------ACACCGCCGCGTGCCTTAAGTGGAGCGATCGAAAGTGCTTAGGTTTGTCT---TTACTATTTATTTTGATCTTTCAAGCCTTTTTCCTAAAA------------A---------ACA---ACAACAACAACAACAACAAGAA------CAAA------------ATTAGATAATTTAGCAAC--------A----------AATGCAAGAG---------------------------------------------------GAGATTGGCAAAAGCAAAGAAACAAAATT--------------------------G-AACTGTGT--AAAAAATGCAACAAAGTAACAAAAAAAACACAAA----------------------------------------------------------------------------AAA-CCGAAA----ACAAAAAA-----
droBip1 scf7180000396712:447965-448192 + --------ACACCGCCGCGTGTCTTAAGTGGAGCGATCGAAAGTGCTTAGGTTTGTCT---ATACTCTTTATTTTGATCTTTCAAGCGTTTTTCCTTAACTTAA------GCA---------ACA---ACAACAACAACAAGAACAAGAA------CAAA------------ATTAGATAATTTAGTAAA--------AAAAATTCAAGAATGCAAGAA---------------------------------------------------GAGATTGGCA------AACAAACAAAATT--------------------------G-AACTGTGT--AAAAAATGCAACAAAGTA---------------A-----------------------------------------------------------------------------CA-CAC-------AAAAAAAA-----
dp5 2:27540653-27540909 + dps_842 TCGAAGCAACGCCGCTGCTTGCCTCAAGTGGAGCGATCGAAAGTGCTTAGGTTTGTCC---ATACTCTTTATTACGATCATGCAAATCTTCTATCTAAACTTTAAACATGCCA---------ACA---ACAACAACAACAACAACAAGAA------CAACATCATCAAAAGCATTAGATAATTTAGCAAC--------A----------AACTAAAA----CGAAGA------AGAAAGAGGGCGAAAAAATCGATAAAAAATCGAAATAT-----------------------AAATC--------------------------GAAACTCTGT--ATAAAACAA-----------------A------A----------------------------------------------------------------------------------C-------AAATGAGA-----
droPer2 scaffold_6:2860340-2860596 + dpe_1894 TCGAAGCAACGCCGCTGCTTGCCTCAAGTGGAGCGATCGAAAGTGCTTAGGTTTGTCC---ATACTCTTTATTACGATCATGCAAATCTTCTATCTAAACTTTAAACATGCCA---------ACA---ACAACAACAACAACAACAAGAA------CAACATCATCAAAAGCATTAGATAATTTAGCAAC--------A----------AACTAAAA----CAAAGA------AGAAAGAGGGCGAAAAAATCGATAAAAAATCGAAATAT-----------------------AAATC--------------------------GAAACTCTGT--ATAAAACAA-----------------A------A----------------------------------------------------------------------------------G-------AAATGAGA-----
droWil2 scf2_1100000004902:6933966-6934224 + TCGTAGCAATACCGCTGCGTGCCTTAAATGGAGCGATCATAAGTGCTTAGGTTTGTCTTGTTTAATCTTTATTTTGATTATGCAAAACTTTTATCTCAACTTCAAACATGCCA---------ACA---AGAACAACAACAACAA---------------------CAAAAGCATTAGATAATTTATTAGG--------AACA----ACAAATGA---------------------------------------------------------------------GAAACACAACAAAAAC--------------------------G-TACTCTGT--AAAAAAAAA--AAAAGAAACAACAAAAATACCAAACGAACAAGAACA----------------------------------------------------------------AA-GCA-AA----ACAAAAATCCATT
droVir3 scaffold_13047:2222678-2222977 + TCGCAGCAATGCAGCCGCCTGCCTCAAGTGGAGCGACCAGAAATGTTTAGGTTTGTCT---TTAATCTTTCTACTCATAACACAAGTCTTCTATCTAAACTTTAAACAAGCCATTGCCATCAACA---------AAAACAACAACAATGG------CAACAGCAACAAAAGCATTAGATAATTCAAGAAA--------A----------ACTA--------------------------------------------------------------------------------------TTTTGCAAAGCTGACAACAACATAAAC-AAT--TGT--AAAAACAAA--AAAACAAAAAACAAA------------ACAAAAACAAAGATGTGAACAAACTTCAATTCCAA-TTTAAAGTTTGATCAA------------A-------AAA-CAA-------ACATTAAC-----
droMoj3 scaffold_6540:22683805-22684107 - TCGTAGCAATGCAGCTGCATGCCTCAAGTGGAACGACCAGAAATGTTTAGGTTTGTCT---TTAATCTTTCTACTCATAACACAAGTCTTCTATCTAAACTATAAACAAGCCA---------TTG---ACAACAACAACAACAGCAACAACAATGGCAACAGCAACAAAAGCATTAGATAATTCAACAAT--------A-------ACAAAAGC--------------------------------------------------------AAAACTA----------------------TTT-ACATAGCCAACAA--ACAA---A-AACTGTAA--AAAAAAAAA-----------------A------A-------AAAACA--AATGTGAACAAACTTCAATTCCAAGTTTAAAGTTTGATCCACAAGCAACAAAA---------AA-AAA-------AAAAAAAA-----
droGri2 scaffold_14906:9051802-9052062 + TCGAAGCAATCCTGCCGCGTGCCTCAAGTGGAACGATCAGAAATGTTTAGGTTTGTCT---TTAATCTTTCTACTCATAACACAAGTCTTCTATCTAAACTTTAAACACGCCA---------TCG---CCACCAACAACAACAATG---G------CAACAACAACAAAAGCATTAGATAATTCAACAGA--------A----------AACTA-------------------------------------------------------------------------------------TTTTGCAAAACTGA------------G-AGC--TGT--AAAAACAAA-----------------AA---------------------TATGCGAACAGACTTCAATTCCAA-TT-AAA----------------ACAAAAAACAAAA--AA-ACA-AA----AAAAAAAA-----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTATGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAAGA------A------CAACATTATCAAATGCATTAGATAATTTAGTAAC--------A----------AATGA----CGGTAAAAAAAAAGAAA----A-----------------------------GAAAATTGGCAACAGCAAAGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AAATGAGA-----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................G-AACTGTGT--AAAGAACGA-----------------...............................................................................................................1811.00100000010000000000
...............................AGCGATCGCAAGTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
.................................................................................................................................................................................................................................................................................ATTGGCAACAGCAAAGAAA......................................................................................................................................................................................1911.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AAAT.........2011.00100100000000000000
.............................................................................................TCTAAACTTTAAACATGCC..........................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
..........................................................................................................................................................................................................................................................................................AGCAAAGAAACAAAATT--------------------------G-AACTGT.............................................................................................................................................2411.00100100000000000000
........................................................................................................AACATGCCA---------ACG---ACAACAACAACAAGA------T------..............................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
...................................ATCGCAAGTGCTTAGGTTTGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
..................................................................................................................................................................TATCAAATGCATTAGATAATTTAGT...............................................................................................................................................................................................................................................................................................2511.00100000000010000000
.........................................................................ATGATCATGCAAGTCTTCTT.............................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...............................................................................................................................................................................................................................AAAAAAAAGAAA----A-----------------------------GA...........................................................................................................................................................................................................15200.05100000010000000000
droSec2
TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTATGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAAGAACAAGAA------CAACATTATCAAATGCATTAGATAATTTAGTAAC--------A----------AATGA----CGGTAAAA-AAAAGAAA----A-----------------------------GCTAATTGGCAACAGCAAAGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AAATGAGA-----SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....AGCAACACCGCCGCGTGCCTTAAGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
...................................................................................................................................................................ATCAAATGCATTAGATAATTTAG................................................................................................................................................................................................................................................................................................2311.0010010
.............GCCGCGTGCCTTAAGTGGAGCGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
..................GTGCCTTAAGTGGAGCGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..................................................................CTTTTTTATGATCATGCAAGT...................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
................................................................................................................................ACAACAACAACAAGAACA........................................................................................................................................................................................................................................................................................................................................18190.0510010
dm3
TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTATGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAAGAACAAAAA------CAACATTATCAAATGCATTAGATAATTTAGTAAC--------A----------AATGA----CGGTAAAAAAAAAGAAA----A-----------------------------GAAAATCGGCAACAGCAAAGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AAATGAGA-----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................GCAAGTGCTTAGGTTTGTCC---TT...........................................................................................................................................................................................................................................................................................................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................T--------------------------G-AACTGTGT--AAAGAACGA-----------------A------........................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AAATT--------------------------G-AACTGTGT--AAAGA....................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------...............................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TAAACTTTAAACATGCCA---------ACG---ACAACAA...................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CGCCGCGTGCCTTAAGTGGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................ATT--------------------------G-AACTGTGT--AAAGAACGA-----------------...............................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AAATT--------------------------G-AACTGTGT--AAAGAACG.................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AACAAAATT--------------------------G-AACTGTGT--AAAG.....................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................ATT--------------------------G-AACTGTGT--AAAGAAC..................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................AAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------........................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................AGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACG.................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................CAAAATT--------------------------G-AACTGTGT--AAAGAA...................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GTGCTTAGGTTTGTCC---TTACTCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................CAAGTCTTCTTTCTAAAC......................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AAATT--------------------------G-AACTGTGT--AAAGAA...................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AAATGAGA-----2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AAATGAG......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................T--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-.......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGCGTGCCTTAAGTGGAGCGATCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................AAAGAAACAAAATT--------------------------G-AACTGTGT--AAAG.....................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GGAGCGATCGCAAGTGCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................TGCCTTAAGTGGAGCGATCGCAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GTGGAGCGATCGCAAGTGCTTAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................................................................................................................................T--------------------------G-AACTGTGT--AAAGAACG.................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AA...........2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AAACTTTAAACATGCCA---------ACG---ACAA......................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AAAATT--------------------------G-AACTGTGT--AAAGAACG.................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................CC---TTACTCTTTTTTATGATC...........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................CAAAATT--------------------------G-AACTGTGT--AAAG.....................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-C......................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TTTTTATGATCATGCAAGTCTTCTTTC...........................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TGTGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AAATGA.......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AAA..........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................AAATGCATTAGATAATTTAGT...............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....GCAACACCGCCGCGTGCCTTAAGTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................TCGGCAACAGCAAAGAAACAAAATT--------------------------G-A..................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................AAGAAACAAAATT--------------------------G-AACTGTGT--AAAGA....................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................ATGCCA---------ACG---ACAACAACAACAA.............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CAAAGAAACAAAATT--------------------------G-AACTG..............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ACAGCAACACCGCCGCGTGCCTTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................AGAAACAAAATT--------------------------G-AACTGTGT--AA.......................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTAAGTGGAGCGATCGCAAGTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........................................AAGTGCTTAGGTTTGTCC---TTACT........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGCCTTAAGTGGAGCGATCGCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................GGTAAAAAAAAAGAAA----A-----------------------------GA...........................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................ACAAAATT--------------------------G-AACTGTGT--AAAGA....................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................AAA----A-----------------------------GAAAATCGGCAACAGC.............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................AATTTAGTAAC--------A----------AATGA----CGGTA...........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................AATTTAGTAAC--------A----------AATGA----CGGTAAAA........................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................CAAGAACAAAAA------CAACATTATCAAATGCAT............................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AA...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------A............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TTAAACATGCCA---------ACG---ACAA......................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................ACTGTGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-C......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CTCTTTTTTATGATCATGCAAGTC..................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............................TGGAGCGATCGCAAGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................AAGAAACAAAATT--------------------------G-AACT...............................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AAATT--------------------------G-AACTGTGT--AAAGAAC..................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GTGGAGCGATCGCAAGTGCTTAG........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................AAGAAACAAAATT--------------------------G-AACTGTGT--AA.......................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CCGCGTGCCTTAAGTGGAGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................ACG---ACAACAACAACAAGAACA........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................AATT--------------------------G-AACTGTGT--AAAGAAC..................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------A.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................AA----A-----------------------------GAAAATCGGCAACAGC.............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GTGCCTTAAGTGGAGCGATCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................AAACAAAATT--------------------------G-AACTGTGT--AAAGA....................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AGGTTTGTCC---TTACTCTTTTT..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................AACAAGAACAAAAA------CAACATTATC....................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................AAAGAAACAAAATT--------------------------G-AACTGTGT--.........................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ACCGCCGCGTGCCTTAAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GTGCCTTAAGTGGAGCGATCGCAAGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................................................................................................................................................................................................................................A-----------------------------GAAAATCGGCAACAGCAAAGA........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................AGCAAAGAAACAAAATT--------------------------G-AACTGTGT--.........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................AAGAACAAAAA------CAACATTC......................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................ACAAGAACAAAAA------CAACA.........................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
................GCGTGCCTTAAGTGGAGATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................CAACAACAACAAGAACAAA......................................................................................................................................................................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AAAAAAAAGAAA----A-----------------------------GAAAAT.......................................................................................................................................................................................................19110.1820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AAACA........2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTATGATCTTGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAAGAACAAGAA------CAACATTATCAAATGCATTAGATAATTTAGTAAC--------A----------AATGA----CGGACAAA-CATT--------------------------------------GAAAATTGGCACCAGAAAAGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A----------------------------------------------------------------------------GAA-CCG-------AAATGAGA-----SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........CACCGCCGCGTGCCTTAAGTGGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
...........................GTGGAGCGATCGCAAGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.............................................................................................................................................................................................................................................................................................................................................GT--AAAGAACGA-----------------A------A----------------------------------------------------------------------------GAA-CC.....................1811.0010000010
..............................................................................................................................................................................................................................................................................................................................................T--AAAGAACGA-----------------A------A----------------------------------------------------------------------------GAA-CCG-------AAATGAGA-----2611.0011000000
................GCGTGCCTTAAGTGGAGCGATCGCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
droYak3
TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTATGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAAGAACAACAA------GA---ACATCAAATGCATTAGATAATTTAGTAAC--------A----------AATGA----CGGAA------AAGAGAAAACA-----------------------------GAAAATTGGCAACAGAAAAGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A--------------------------------------------------------------------AAAAAAAGGAA-CCG-------AAATGAGA-----SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........CCGCCGCGTGCCTTAAGTGGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.......................................................................................................................................................................................................................................................................................................AATT--------------------------G-AACTGTGT--AAAGAAC..................................................................................................................................2011.00100000010000
..................GTGCCTTAAGTGGAGCGATCGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
..................................................................................................................................................................................................................ATGA----CGGAA------AAGAGAAAACA-----------------------------.............................................................................................................................................................................................................2011.00100000010000
.............................................................................................................................................................................................................................................ACA-----------------------------GAAAATTGGCAACAGAAAAG.........................................................................................................................................................................................2311.00100000010000
............................................................................................................................................................................................................................................AACA-----------------------------GAAAATTGGCAACAGAAAAGA........................................................................................................................................................................................2511.00100000010000
.CACAGCAACACCGCCGCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
droEug1
TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTATGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAAGAACAACAA------CAACATTATCAAATGCATTAGATAATTTAGTAAC--------A----------AATGAAAA----AA------AAGAACAAACA-----AAAAA---------------AAACATAAATTGGCAACCGAAGAGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A--------------------------------------------------------------------A-------AAA-CCG-------AAATGAGA-----SizeHit CountTotal NormTotal
No Reads
droBia1
TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---CTACTCTTTTTTATGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAACAACAAGAA------CAACATTATCAAATGCATTAGATAATTTAGCAAT--------A----------AACAAAAGAC---------------------------------------------------GAAATTGGCAACAGACAAGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AAATGAGA-----SizeHit CountTotal NormTotal
No Reads
droTak1
TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTATGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAAGAACAAGAA------CAACATTATCAAATGCATTAGATAATTTAGCAAT--------A----------AATTAAAA------------AAGAGA----A-----------------------------AGAAATCAGCAACAGACAAGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AAATGAGA-----SizeHit CountTotal NormTotal
No Reads
droEle1
TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTACGATCATGCAAGTCTTCTTCCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAAGA------A------TAACATAATTAAATGTATTAGATAATTTAGCAATTAACTAAAA----------AATGA----G---------------------------------------------------GAAATTGGCAACAGAAAAGAAACAAAATT--------------------------G-AACTGTGTGTAAAAAACGA-----------------A------A-----------------------------------------------------------------------------AA-CCG-------AAAGAAGA-----SizeHit CountTotal NormTotal
No Reads
droRho1
TCACAGGAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTACGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACTACAAGA------A------CAACATTATTAAATGCATTAGATAATTTAGCAAT--------T----------ATTTAAAGAG---------------------------------------------------GAAATTGGCAACAGAAAAGAAACAAAATT--------------------------G-AACTATGT--AAAGAACGA-----------------A------A-----------------------------------------------------------------------------AA-CGG-------AAAGGAGA-----SizeHit CountTotal NormTotal
No Reads
droFic1
TCACAGCAACACCGCCGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTACGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACG---ACAACAACAACAAGAACAAGAA---------CATTATCAAATGCATTAGATAATTTAGCAAC--------A----------AATGAAAGAC---------------------------------------------------GAAATTGGCAACAGAAAAGAAACAAAATT--------------------------G-AACTGTGT--AAAGAACGA-----------------G------A-----------------------------------------------------------------------------AGTCCG-------A----AGA-----SizeHit CountTotal NormTotal
No Reads
droKik1
TCATAGCAATACCGCTGCGTGCCTTAAGTGGAGCGATCGCAAGTGCTTAGGTTTGTCC---TTACTCTTTTTTACGATCATGCAAGTCTTCTTTCTAAACTTTAAACATGCCA---------ACGATAACAACAACAACAAGAACAAGAA------CAACAT---------CATTAGATAATTTAGCAAC--------A----------AACGAGAGTC---------------------------------------------GAAG-GAAAATTGGCAACAGCAAAGAAACAAAATT--------------------------G-AACTGTAT--AAGAAAA--------------------A---------------------TGTGTAAAAGA-------------------------ATCGGGAAATGGCAAGA---------AA-AGA-GAGAGAGACAGAGA-----SizeHit CountTotal NormTotal
No Reads
droAna3
--------ACACCGCCGCGTGCCTTAAGTGGAGCGATCGAAAGTGCTTAGGTTTGTCT---TTACTATTTATTTTGATCTTTCAAGCCTTTTTCCTAAAA------------A---------ACA---ACAACAACAACAACAACAAGAA------CAAA------------ATTAGATAATTTAGCAAC--------A----------AATGCAAGAG---------------------------------------------------GAGATTGGCAAAAGCAAAGAAACAAAATT--------------------------G-AACTGTGT--AAAAAATGCAACAAAGTAACAAAAAAAACACAAA----------------------------------------------------------------------------AAA-CCGAAA----ACAAAAAA-----SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................TTTAGCAAC--------A----------AATGCAAGAG---------------------------------------------------GAGATT......................................................................................................................................................................................................2612.002000020
....................GCCTTAAGTGGAGCGATCGAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.....................................CGAAAGTGCTTAGGTTTGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
................................GCGATCGAAAGTGCTTAGGTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.....................................................................TATTTTGATCTTTCAAGCCTTTT..............................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.............................................................................................................................................................................................C--------A----------AATGCAAGAG---------------------------------------------------GAGATTGGC...................................................................................................................................................................................................2111.001000001
.....................................................................................................................................................................................TTTAGCAAC--------A----------AATGCAAGAG---------------------------------------------------GAGAT.......................................................................................................................................................................................................2511.001000010
...................................................................................................................................................................................................................TGCAAGAG---------------------------------------------------GAGATTGGCA..................................................................................................................................................................................................1811.001010000
...................................................................................................................................................................................................................................................................................................................................................................ACAAAAAAAACACAAA----------------------------------------------------------------------------AAA-CCC....................2220.501010000
......................................................................................................................................................................................................................................................................................................................................................................AAAAAAACACAAA----------------------------------------------------------------------------AAA-CCGA...................2030.331010000
.....................................................................................................................................................................................................................................................................................................................................................................AAAAAAAACACAAA----------------------------------------------------------------------------AAA-CC.....................1940.251010000
........................................................................................................................................................................................................................................................................................................................................................................AAAAACACAAA----------------------------------------------------------------------------AAA-CCGA...................1840.251010000
.................................................................................................................................................................................................................................................................................................................................................................................AA----------------------------------------------------------------------------AAA-CCGAAA----ACAAAAAA-----1960.171010000
...................................................................................................................................................................................................................................................................................................................................................................ACAAAAAAAACACAAA----------------------------------------------------------------------------AA.........................18120.081001000
.....................................................................................................................................................................................................................................................................................................................................................................AAAAAAAACACAAA----------------------------------------------------------------------------AAA-CCA....................20200.051010000
..................................................................................................AA------------A---------ACA---ACAACAACAACAACA...........................................................................................................................................................................................................................................................................................................................................21200.051100000
droBip1
--------ACACCGCCGCGTGTCTTAAGTGGAGCGATCGAAAGTGCTTAGGTTTGTCT---ATACTCTTTATTTTGATCTTTCAAGCGTTTTTCCTTAACTTAA------GCA---------ACA---ACAACAACAACAAGAACAAGAA------CAAA------------ATTAGATAATTTAGTAAA--------AAAAATTCAAGAATGCAAGAA---------------------------------------------------GAGATTGGCA------AACAAACAAAATT--------------------------G-AACTGTGT--AAAAAATGCAACAAAGTA---------------A-----------------------------------------------------------------------------CA-CAC-------AAAAAAAA-----SizeHit CountTotal NormTotal
No Reads
dp5
TCGAAGCAACGCCGCTGCTTGCCTCAAGTGGAGCGATCGAAAGTGCTTAGGTTTGTCC---ATACTCTTTATTACGATCATGCAAATCTTCTATCTAAACTTTAAACATGCCA---------ACA---ACAACAACAACAACAACAAGAA------CAACATCATCAAAAGCATTAGATAATTTAGCAAC--------A----------AACTAAAA----CGAAGA------AGAAAGAGGGCGAAAAAATCGATAAAAAATCGAAATAT-----------------------AAATC--------------------------GAAACTCTGT--ATAAAACAA-----------------A------A----------------------------------------------------------------------------------C-------AAATGAGA-----SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................A----------AACTAAAA----CGAAGA------AGAAAGAGGGCGA....................................................................................................................................................................................................................................2811.0010010000000
..................TTGCCTCAAGTGGAGCGATCGAAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..............................................................................................................................................................................................................................GAAGA------AGAAAGAGGGCGAAAAAATC.............................................................................................................................................................................................................................2511.0010010000000
..........................................................................................................................................................................................................................................................................AATAT-----------------------AAATC--------------------------GAAACTCTGT--.........................................................................................................................................2011.0010010000000
......................................................................................................................................................................................................................AAA----CGAAGA------AGAAAGAGGG.......................................................................................................................................................................................................................................1911.0010000100000
................................................................................................................A---------ACA---ACAACAACAACAACAAC.........................................................................................................................................................................................................................................................................................................................................21200.2040400000000
........................................................................................................................................AACAACAACAAGAA------CAACA.........................................................................................................................................................................................................................................................................................................................19200.0510100000000
............................................................................................................................A---ACAACAACAACAACAACAAG......................................................................................................................................................................................................................................................................................................................................21200.0510100000000
droPer2
TCGAAGCAACGCCGCTGCTTGCCTCAAGTGGAGCGATCGAAAGTGCTTAGGTTTGTCC---ATACTCTTTATTACGATCATGCAAATCTTCTATCTAAACTTTAAACATGCCA---------ACA---ACAACAACAACAACAACAAGAA------CAACATCATCAAAAGCATTAGATAATTTAGCAAC--------A----------AACTAAAA----CAAAGA------AGAAAGAGGGCGAAAAAATCGATAAAAAATCGAAATAT-----------------------AAATC--------------------------GAAACTCTGT--ATAAAACAA-----------------A------A----------------------------------------------------------------------------------G-------AAATGAGA-----SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................AA----CAAAGA------AGAAAGAGGGC......................................................................................................................................................................................................................................1912.002200000
......................................................................................................................................................................................................................AAA----CAAAGA------AGAAAGAGGGC......................................................................................................................................................................................................................................2011.001100000
....................GCCTCAAGTGGAGCGATCGAAAGTGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
......................................................................................................................................ACAACAACAACAAGAA------CAAC..........................................................................................................................................................................................................................................................................................................................20200.051010000
droWil2
TCGTAGCAATACCGCTGCGTGCCTTAAATGGAGCGATCATAAGTGCTTAGGTTTGTCTTGTTTAATCTTTATTTTGATTATGCAAAACTTTTATCTCAACTTCAAACATGCCA---------ACA---AGAACAACAACAACAA---------------------CAAAAGCATTAGATAATTTATTAGG--------AACA----ACAAATGA---------------------------------------------------------------------GAAACACAACAAAAAC--------------------------G-TACTCTGT--AAAAAAAAA--AAAAGAAACAACAAAAATACCAAACGAACAAGAACA----------------------------------------------------------------AA-GCA-AA----ACAAAAATCCATTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................TAAATGGAGCGATCATAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.......................TTAAATGGAGCGATCATAAGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
........ATACCGCTGCGTGCCTTAAATGGAGCGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
........................TAAATGGAGCGATCATAAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
......................................ATAAGTGCTTAGGTTTGTCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
......CAATACCGCTGCGTGCCTTAAATGGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
............................................................................................................................................................................................................................................................................................................................................................................ATACCAAACGAACAAGAACA----------------------------------------------------------------..........................2011.00101000
...............................................................................................................................................................................................................................................................................................CACAACAAAAAC--------------------------G-TACTCTGT--.........................................................................................................................................2111.00101000
..........................................................................................................................................................................................................................................................................................................................................TCTGT--AAAAAAAAA--AAAA..........................................................................................................................1880.38320010
...................................................................................................................................ACAACAACAACAA---------------------CAAAAGCA.............................................................................................................................................................................................................................................................................................................21200.05100010
droVir3
TCGCAGCAATGCAGCCGCCTGCCTCAAGTGGAGCGACCAGAAATGTTTAGGTTTGTCT---TTAATCTTTCTACTCATAACACAAGTCTTCTATCTAAACTTTAAACAAGCCATTGCCATCAACA---------AAAACAACAACAATGG------CAACAGCAACAAAAGCATTAGATAATTCAAGAAA--------A----------ACTA--------------------------------------------------------------------------------------TTTTGCAAAGCTGACAACAACATAAAC-AAT--TGT--AAAAACAAA--AAAACAAAAAACAAA------------ACAAAAACAAAGATGTGAACAAACTTCAATTCCAA-TTTAAAGTTTGATCAA------------A-------AAA-CAA-------ACATTAAC-----SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................CAACAGCAACAAAAGCATTAGAT.......................................................................................................................................................................................................................................................................................................2312.002000000000000000000000200000000000000000000000000000000000000000
........................................................................................................................CAACA---------AAAACAACAACAATGG------C.............................................................................................................................................................................................................................................................................................................................2221.503000300000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................AACAGCAACAAAAGCATTA..........................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
........................................................................ACTCATAACACAAGTCTTCTATCT..........................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AAAACAAAGATGTGAACAAACTTC........................................................................2411.001000000000000000010000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AAAACAAAGATGTGAACAAACT..........................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
....................GCCTCAAGTGGAGCGACCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................CATAACACAAGTCTTCTATC...........................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CAATTCCAA-TTTAAAGTTTGATC.................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................A-TTTAAAGTTTGATCAA------------A-------A..........................1911.001000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GACAACAACATAAAC-AAT--T.............................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................AAGTGGAGCGACCAGAAATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................AGCATTAGATAATTCAAGA..............................................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................A--------------------------------------------------------------------------------------TTTTGCAAAGCTGACAACAAC..........................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................................GCGACCAGAAATGTTTAGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................TAATTCAAGAAA--------A----------ACTA--------------------------------------------------------------------------------------TTTTGCAAAGC....................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.........................................AATGTTTAGGTTTGTCT---TTA..........................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GCCATCAACA---------AAAACAACAACAATGG------C.............................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAA-TTTAAAGTTTGAT..................................................1911.001000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CTTCAATTCCAA-TTTAAAGT.......................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................AACA---------AAAACAACAACAATGG------C.............................................................................................................................................................................................................................................................................................................................2120.501000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................AACAACAATGG------CAACAGCA......................................................................................................................................................................................................................................................................................................................19140.071000000000000000000100000000000000000000000000000000000000000000
droMoj3
TCGTAGCAATGCAGCTGCATGCCTCAAGTGGAACGACCAGAAATGTTTAGGTTTGTCT---TTAATCTTTCTACTCATAACACAAGTCTTCTATCTAAACTATAAACAAGCCA---------TTG---ACAACAACAACAACAGCAACAACAATGGCAACAGCAACAAAAGCATTAGATAATTCAACAAT--------A-------ACAAAAGC--------------------------------------------------------AAAACTA----------------------TTT-ACATAGCCAACAA--ACAA---A-AACTGTAA--AAAAAAAAA-----------------A------A-------AAAACA--AATGTGAACAAACTTCAATTCCAAGTTTAAAGTTTGATCCACAAGCAACAAAA---------AA-AAA-------AAAAAAAA-----SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................................................................................................................................................A-AACTGTAA--AAAAAAAAA-----------------A------A-------AAAA............................................................................................2420.501100000
............................................................................................................................G---ACAACAACAACAACAGCAACAACAATG...............................................................................................................................................................................................................................................................................................................................2820.501100000
.....................................................................................................................................................................................................................................................................................................................................A-AACTGTAA--AAAAAAAAA-----------------A------A-------A...............................................................................................2130.331100000
............................................................................................................................................ACAGCAACAACAATGGCAACA.........................................................................................................................................................................................................................................................................................................................2190.111000010
droGri2
TCGAAGCAATCCTGCCGCGTGCCTCAAGTGGAACGATCAGAAATGTTTAGGTTTGTCT---TTAATCTTTCTACTCATAACACAAGTCTTCTATCTAAACTTTAAACACGCCA---------TCG---CCACCAACAACAACAATG---G------CAACAACAACAAAAGCATTAGATAATTCAACAGA--------A----------AACTA-------------------------------------------------------------------------------------TTTTGCAAAACTGA------------G-AGC--TGT--AAAAACAAA-----------------AA---------------------TATGCGAACAGACTTCAATTCCAA-TT-AAA----------------ACAAAAAACAAAA--AA-ACA-AA----AAAAAAAA-----SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....GCAATCCTGCCGCGTGCCTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
..........................................................................................................CACGCCA---------TCG---CCACCAAC..................................................................................................................................................................................................................................................................................................................................................1811.00110
...........................................................................CATAACACAAGTCTTCTATCT..........................................................................................................................................................................................................................................................................................................................................................................................2111.00110
...............................................................................................................................................ATG---G------CAACAACAACAAAAGCA.............................................................................................................................................................................................................................................................................................................2120.50110

Generated: 05/18/2015 at 02:39 PM