ID:

dsi_30850

 Coordinate:

x:2987508-2987657 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.7 -9.7

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTGACTAAAGTGAAATATTTAAAACAGAGCATCAGGCGAACGAAAAGGAATAATTAATATGACCTAGCTTAAGAGAAGTTATTAAGTTTTTAATGTTTTGCATGCCCAAACAGATTTATTTTACTTGATTGATAACGCTAGACCTAACCGATAAACGATAACAGCAACACATGGAGTTTTTTTTATAATTTAGACCACAGCGACAGAAGCGAAAGAAAATCAACCATGTAAAGTGTAAGAACCCAGTGAA
**************************************************.............((((((((((.(((((......((((...((((...))))....))))......))))).)))))........)))))..........*************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 M024
male body		 M053
female body
 O001
Testis
 M023
head
 SRR902009
testis
 GSM343915
embryo
............................................................................................................................TTGATTGATAACGCTAGACCTAACCGA................................................................................................... 27 0 1 8.00 8 5 3 0 0 0 0 0 0 0 0 0 0 0
..................................................TAATTAATATGACCTAGCTTAAGAGA.............................................................................................................................................................................. 26 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TGTAAAGTGTAAGAACCC...... 18 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................TACTTGATTGATAACGCTAGACCTAACCGA................................................................................................... 30 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TTACTTGATTGATAACGCTAGACC.......................................................................................................... 24 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0
...............................TCAGGCGAACGAAAAGGAATAATTAA................................................................................................................................................................................................. 26 0 1 2.00 2 0 0 0 0 0 0 1 0 0 0 0 1 0
...............................TCAGGCGAACGAAAAGGAATAAT.................................................................................................................................................................................................... 23 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
...................TAAAACAGAGCTTCAGGCGAGGG................................................................................................................................................................................................................ 23 3 2 1.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................................................................................TGATAACGCTAGACCTAACCGATAAACGA............................................................................................ 29 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................TAAACGATAACAGCAACACATGGAGTT........................................................................ 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................TACTTGATTGATAACGCTAGACC.......................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................AGAGCATCAGGCGAACGAAAAGGAAT....................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
TTGACTAAAGTGAAATATTTAAAACAGA.............................................................................................................................................................................................................................. 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................TTGATTGATAGCGCTGGACCT......................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................CTTGATTGATAACGCTAGACCTAACCGA................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TTTACTTGATTGATAACGCTAGACCT......................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...............TATTTAAAACAGAGCATCAGGCGAACGA............................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................TGACCTAGCTTAAGAGAA............................................................................................................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TAACGCTGGAGCTAACCGA................................................................................................... 19 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................ATTTTACTTGATTGATAACGCTA.............................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................GACCGAACCGATAAACG............................................................................................. 17 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................AACCGATAAACGATAACAGCAACACA............................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GATTGATAACGCTAGACC.......................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................TTGATTGATAACGCTAGGCCTAACCGATA................................................................................................. 29 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAATCAACCATGTAAAGTGTAAGAAC........ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............TATTTAAAACAGAGCATCAGGCGAA.................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................ATCAGGCGAACGAAAAGGA......................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................................................TGATTGATAACGCTAGACCTAACCGA................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................TTTAAAACAGAGCATCAGGCGAACGAA.............................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................TCAGGCGAACGAAAAGGAATAATT................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......AAAGTGAAATATTTAAAACAGAGCAT.......................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................ACTTGATTGATAACGCTAGACCTAACCGA................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TAACGCTAGACCTAACCGATA................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................................TTACTTGATTGATAACGCTAGACCTAACCGA................................................................................................... 31 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................AGACCTAACCGATAAACGAT........................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................TTTACTTGATTGATAACGCTA.............................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................CGATAAACGATAACAGCAACACATGGA........................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TTTATTTTACTTGATTGATAACGCT............................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TACTTGATTGATAACGCTAGACCTAAC...................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTGATTGATAACGCTAGACCT......................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................AGGCGAACGAAAAGG.......................................................................................................................................................................................................... 15 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................AAGGAATAAAGAATTTGACC.......................................................................................................................................................................................... 20 3 19 0.11 2 0 0 0 0 0 0 0 1 0 0 1 0 0

Anti-sense strand reads

AACTGATTTCACTTTATAAATTTTGTCTCGTAGTCCGCTTGCTTTTCCTTATTAATTATACTGGATCGAATTCTCTTCAATAATTCAAAAATTACAAAACGTACGGGTTTGTCTAAATAAAATGAACTAACTATTGCGATCTGGATTGGCTATTTGCTATTGTCGTTGTGTACCTCAAAAAAAATATTAAATCTGGTGTCGCTGTCTTCGCTTTCTTTTAGTTGGTACATTTCACATTCTTGGGTCACTT
***************************************************************************************************.............((((((((((.(((((......((((...((((...))))....))))......))))).)))))........)))))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 M023
head
 SRR553487
NRT_0-2 hours eggs
 O002
Head
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 GSM343915
embryo
 SRR902008
ovaries
..............................................................................................................................................GGATTGGCTATCTGC............................................................................................. 15 1 3 1.33 4 3 0 1 0 0 0 0 0 0 0
..............................TAGTCCGCTTGCTTTTCCTTA....................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AAAAAAAATTAAATTTGGTGTCGCT............................................... 25 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................CTGGATCGAATTCTCTTCAATA........................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................CAGGATTGGCTATTTGCTT........................................................................................... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................TCTCTTCCATAATTCAAGGAT.............................................................................................................................................................. 21 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................GTGGCGATGTGTACCTCAA........................................................................ 19 3 14 0.43 6 0 0 0 0 4 0 0 2 0 0
.......................................................................TCTCGTCCATAATTCAAGAAT.............................................................................................................................................................. 21 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................CAGGATTGGCTATCTGCT............................................................................................ 18 2 7 0.29 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GGATTGGCTATCTGCTT........................................................................................... 17 2 12 0.25 3 3 0 0 0 0 0 0 0 0 0
...............................................................................................................................................GATTGGCTATCTGCT............................................................................................ 15 1 8 0.25 2 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TGGCGATGTGTACCTCAA........................................................................ 18 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................CTCTTTTAGTTGGTAC...................... 16 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0
.......................................................................TCTCGTCAATAATTCAAGGAT.............................................................................................................................................................. 21 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................AGGATTGGCTATCTGC............................................................................................. 16 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0
...................................................TTAATTTTCCAGGATCGAATT.................................................................................................................................................................................. 21 3 7 0.14 1 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................AATTGTCGTTATGTACCTCC......................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................GGGATTGGCTATCTGCTTT.......................................................................................... 19 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TGGCGATGTGTACCTCA......................................................................... 17 2 9 0.11 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................CAGGATTGGCTATCTG.............................................................................................. 16 2 20 0.10 2 0 0 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TTTCACAGTCTTGGGCAACT. 20 3 13 0.08 1 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................AATATGGTGTCGCGGTC............................................ 17 2 14 0.07 1 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................AGGATTGGCTATCTGCT............................................................................................ 17 2 14 0.07 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................AAAGGAAATGAACAAACTATT................................................................................................................... 21 3 17 0.06 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAAATATGAAGTCTGGTAT................................................... 20 3 17 0.06 1 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................................................GGCGTTGTGTACCTTAA........................................................................ 17 2 17 0.06 1 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................CGCTGTCTTCGCTCT.................................... 15 1 18 0.06 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................CAGGATTGGCTATCTGCTC........................................................................................... 19 3 19 0.05 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GTGGCGATGTGTACCTCA......................................................................... 18 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:2987458-2987707 + dsi_30850 TTGACTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAA--ACAG-------------A-----GCATCAGG--CGAACGAAAAGGAA-----T--AATTA-ATATGA-C--CTAGCTT--AAGAGAA----------GT---------------------------------------TATTAAGTTTTT-AATGT--TTTGCATGCCCA--AACAGATTTATTTTACTTGAT-------------TGAT-------------------AA-CGCTAGACCTAACCG-------------------ATAAAC---GATAACAGCAAC----------------ACATGGAGTTTTTTT-----TATAATTTAGACCAC---AGCGACAGAAGCGA--------------------------------A-------------------AGAAAA-----TCAACCAT------G-TAAAGTGTAAGA--ACCCAGTGAA
droSec2 scaffold_10:2939428-2939677 + TTGACTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAA--ACGG-------------A-----GAATCAGG--CGAACGAAAGGGAA-----T--AATTA-ATCTGA-C--CTAGCTT--AAGAGAA----------GT---------------------------------------TATTAAGTTTTA-AATGT--TTTGCATGCCCA--AACAGATTTATTTTACTTGAT-------------TGAT-------------------AA-CGCTAGACCTAACTG-------------------ATAAAC---GATAACAGCAAC----------------ACATGGAGTTTTTTT-----TATAATTTAGACCAC---AGCGACAGAAGCGA--------------------------------A-------------------AGAAAA-----TCAACCAT------G-TAAAGTGTAAGA--ACCCAGTGAA
dm3 chrX:3233874-3234136 + TTGACTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAAAAACAG-------------A-----GAATCAGG--CGAACGAAAAGGAA-----T--AATTA-ATATGA-C--CTAGCTTATAAGAGAA----------GT---------------------------------------TATTAAGTTTTTAAATGT--TTTGCATGCCCG--AACAGATTTATTTTACTTGAT---------TGATTGAT-------------------AA-CGCTAGATCTAACTG-------------------ATAAAC---GATAACAGCAAC----------------ACATGGAGTTTTTTT-TTTATATAATTTAGACCAC---AGCGATAGAAGCGA--------------------------------A-------------------AGAAAA-----TCAACCAT------G-TAAAGTTTAAGA--ACCCAGTGAA
droEre2 scaffold_4690:645117-645382 + TTGACTAAAGTGAA-----------------------------------------------AT-------------------------------TAAT-TAAA-AACAG-------------A-----GAATCAGGCACAAACGAAAAGGAA-----T--AATTA-ATACGACC--CTAGCTT--AAGAGAA----------GT---------------------------------------TATTAAGTTTTT-AATGT--TTTGCATGCCCC-AAACAGATTTATTTTACTTGAT-------------TGAT-------------------AA-CGCTAGATTTAACTGAT-------AAT------GAT-AAC---GATAACAGCAAC----------------ACATGGAGTTTTTTTTTTTATATAATTTAGACCAC---AGCGATAGAAGCGA--------------------------------A-------------------AGAAAA-----TCAACCGT------G-TAATGTGTAAGA--ACCCAGTGAA
droYak3 X:5146625-5146874 - TTGACTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAC--GCAG-------------A-----GAATCAGG--CAAACGAAAAGGAA-----T--AATTA-ATACGA-C--CTAGCTT--AAGAGAA----------GT---------------------------------------TATTAAGTTTTT-AATGT--TTTGCATGCACC-AAATAGATTTATTTTACTTGAT-------------TGAA-------------------AA-CGCTAGATCTAACTG-------------------ATAAAC--TGATAACAGCAGC----------------ACATGGAGTT--TTT-----TATAATTTAGACCAC---AGCGATAGAAGCGA--------------------------------A-------------------AGAAAA-----TCAACCAT------G-TAAAGTGTAAAA--ACCCAGTGAA
droEug1 scf7180000408825:7564-7837 - TTGACTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAA--CAAG-------------AAAAA-AAAACAAC--CAAACGGAAAGGA------TAAAATTA-ATACTA-T--TTAGCTT--AAGAGAA----------GT---------------------------------------TTTTAAGTTTTT-AATGT--TTTGCATGCCCCTACACAGATTCATTTTACTTGAT-------------TGAT-------------------AA-AGTTAGATCTAACTGATAACTGATAACC-----GATAAAC---GATAACAGCATC----------------TTCTGAAGTTTTTTT-TAAATATAATTTAGACCCC---AGCGATAAAAGCGA--------------------------------A-------------------CTA--A-----GCAACCAT------G-TAAAATGTAAGA-ATCCCAGTGAA
droBia1 scf7180000302126:1957903-1958175 - TTGACTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAA--AAAG-------------A-----AAAATAAC--CAAACGGAAAGAAA-----T--AATTA-GTACGA-C--TTAGCCT--AAGAGAA----------GT---------------------------------------TTTTAAGTTTTG-AATGT--TTTGCATGCCCC-GAACAGATTCATTTTACTCGAT-------------TGAT-------------------AA-CGCTAGATCTAACTTGT-------AACC-----GATAAAC---GATAACAGCAACC--C------------ATATGGAGTT--TTT-----TATGATTTAGACCCC---AGCGATAGAAGCGA--------------------------------AAACAAAAAAAA--CCACAAACA--A-----ACAACCAT------G-TTAAGTGTAAGA--ACCCAGTGAA
droTak1 scf7180000415360:190889-191168 + TTGACTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAAAACAAG-------------A-----AAAACAAC--CGAACGGA-AGGAA-----T--AATTA-ATACGA-C--TTAGCTT--AAGAGAT----------GT---------------------------------------TTTTAAGTTTTG-AATGT--TTTGCATGCCCG--AACAGATCCATTTTACTCGAT-------------TGAT-------------------AA-CGTTAGATCTAACTTTA-------GACC-----GATTAAC---GCTAACGGCAACATAC------------ATATGGAATT--TTT-----TATGATTTAGACCCC---AGCGATAGAAGCGA--------------------------------AAACAAAAAGAAAAACAAAAACTAAA----ACCAACCAT------G-TTAAGTGTAAGA--ACCCAGTGAA
droEle1 scf7180000490996:419634-419884 + TTGACTAATGTGAA-----------------------------------------------AT---------------------------------AATTAAC--AAAG-------------A-----AAA-------CAAACGGAAAGGAA-----T--AATCA-ATACGA-C--TAAGCTT--TAGAGAA----------GT---------------------------------------T-TTAAGTTTTT-AATGT--TTTGCATGCCCG--AAAAGATTCATTTTACTTGAT-------------TGAT-------------------AA-TGTTAGCTCTAACTG-------------------ATAACC---GATAACAGCAACA--C------------AAATGAAGT---TTT-----TATGATTTAGACCCCAAGAGAGAGAGAAGCGA--------------------------------A-------------------AAAAACAGAAAACAAGCAT------G-TAAAGTGTAAGA--AAACAGTGAA
droRho1 scf7180000779337:440232-440484 + TTGACTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAC--AAAG-------------A-----AAA---AA--CAAACGGAAAGGAA-----T--AATTA-ATACGA-T--TTAGCTT--AAGAAAA----------GT---------------------------------------TTTTAAGTTTTT-AATGT--TATGCATGCCCG--AACAGATTTATTTTACTCGAT-------------TGAT-------------------AA-CGTTAGATCTAACTGAT-------AACC-----CATAAAC---GATAACAGCAACA--C------------ATATGGAGTT--TTT-----TATGATTTAGACCCCA--AGCGAGAGAAGCGA--------------------------------A-------------------AAAA-------ACAACCCT------G-TAAAGTGTAAGA--ACCCAGTGAA
droFic1 scf7180000454072:85148-85348 - TTGACTAAAATGAA-----------------------------------------------CT---------------------------------ACTAAAA--AAAG-------------A-----A---TAA---CTAACTGGAAGAAA-----T--AATAC-ATAGGTTT--TTAGCTT--AAGCAAA----------GT---------------------------------------TTCTAAGTTTTA-CATGT---TTGCATGCCCG--AAATTTTTCATTTTACTCAAT-------------TGAT-------------------AC-CGTTTGTTCCAAGT--------------------------------------AA----C------------ATATGAAGTT--TTG-----TATGATTTGGACC----------------------------------------------------------------------------------------AT------G-TGCAACACCAACACCCCTAGTGAA
droKik1 scf7180000302344:1104184-1104445 - TTGACTAAAAC----------------------------------------------------------------------------------------------------------CGA---AAGA-AGACCAGA-TCGGACGGG-GGGAT-----TACAATTAAATACGA----TTAGTTT--AAGAGAAAGCCTCCTTTTT---------------------------------------TATTAAGTTTTT-AATGTTTTTTGCATGCCCG-GAACAGGTTCATTTTACTCGATGATTACTTTTGATTGAT-------------------AAACGATAG------CTGGC-------AATC-----GATACCCATCGATAACAGCGT------------------TATTGAATT--TTT-----AATGATTTAGACA-A---AGCAA-AGAAGCGA--------------------------------A-------------------A----A----ACC--CCAT------G-TAAAGTGTAAGA--ATCCAGTGAA
droAna3 scaffold_12613:150860-151109 - ATAACTAAACAAGA-----------------------------------------------AC---------------------------------TTTTAAAATATTGACAAACACTGAAAA--GGAAAAAT--A-TAGAAGAGAAAG-AA-----TTC--AAC-ATATTTTT--TTAGCCT--AAGAGAAG---------AG---------------------------------------TTTTAAGTTTT--AATAT--TTTGCTAACTTG--ATCAGCTATGATTTA--AAAT-------------TTGT-------------------AA-TTTTAATTTAAAATG-------------------TT-GTT---GAACACATCA-----C------------ATATTGAATT--TTT-----TATGATTTAGACA-A---A---------GTTT--------------------------------A-------------------AGAAAA-----AC--TGTT------G-TACAATTTAAGA-AACCCAGTGAA
droBip1 scf7180000396038:45767-45991 - TTGACAAAAAAAAA-----------------------------------------------AC------------------------------------------------------TGA---AAGGAA--AT--G-TAGAAGAAAAAGGAAAACAATAC--AAC-ATATTTTTTGTTAGACT--AAGAGAAGA--------GT---------------------------------------TTTTAAGTTTT--AATAT--TCTGCTAACTTG--ATATGTTTT---------GAT-------------TTAA-------------------AA-TTTTATTACTCG----------------------TT-ATT---GAACACATCA-----C------------ATATTGAATT--TTT-----TATGATTTAGACA-A---A---------GTTT--------------------------------A-------------------AGAAAA-----AC--TGTT------G-TATAATTTAAGA-AACCCAGTGAA
dp5 XL_group1e:2777496-2777735 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAT--AAGAGAAA---------GT---------------------------------------TTTTAAGTTTT--AATGTT-TTTGCATGCCTG-AAAAACGTTTATTTTACTCGATGATT-CTGTTGTTTGAT-------------------TA-CGTTAG--------------------CC-----AATAGCC---GATAGCAGCG-----C------------ATATTGAAATGATTT-----TATGATTTAGACA-A---AGCAAAAGAAGCAACCCACAAACTCACACAAAGCAAAACAAAACCAAAACAAAAACAAAAAAGAAAAGAAAA-----AC--CAAT------G-TAAAGTGTAAGA--ACCCAGTGAA
droPer2 scaffold_18:1674460-1674847 + TTGACAAAACTGAACCCAGGCCAGGAAGGCACACACACACAACCTCCCCTAGAACACCTAGATATCCATCCCCACCAGAACCGAGCAGAGCGGA--ACCGAAGAGAATGATACGGAAGCGGAA-----ACG-------GAAA-----CAGAA-----G--CAGAA-GTACAT-T--TAAGCAT--AAGAGAAA---------GT---------------------------------------TTTTAAGTTTT--AATGTT-TTTGCATGCCTG-AAAAACGTTTATTTTACTCGATGATT-CTGTTGTTTGAT-------------------TA-CGTTAG--------------------CC-----AATAGCC---GATAGCAGCG-----C------------ATATTGAAATGATTT-----TATGATTTAGACA-A---AGCAAAAGAAGCAACCCACAAACTCACACAAAGCAAAACAAAACCAAAACAAAAACAAAAAAGAAAAGAAAA-----AC--CAAT------G-TAAAGTGTAAGA--ACCCAGTGAA
droVir3 scaffold_12726:675425-675732 + TTATTAA-GCAAGC-----------------------------------------------GA---------------------------------ACTTTAGTTTTTAATATGCAACAAAAA-----AAA-------AAAAGAAAAAAGAA-----T----------GTAA---------------ACAAA--------TTTCTGTTAAATTTAATATTCATTGCGTAGCTTAAGTCAACAATTTGTTGTTT----------------------------------------------------------TTATTACATTTTATTATATTGACAA-ACCAAGGCCAGGAAGGC-------AACTAGAACAA-CAAC---AACAACAACAACA--AATAACAAGTTAACCATTAAGTTTTTTT-TTAAGCTAATTTCTAACTGAACAACGCTTCAAGCTC--------------------------------A-ACAAAAAGAA--------AGAAAA-----TT---ATTGTGCATGCTAAAATTTAAAA--ATTAACGTAA
droMoj3 scaffold_6308:2399813-2399823 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--ACCCAGTGAA
droGri2 scaffold_14853:4424324-4424334 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--AACCAGTGAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTGACTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAA--ACAG-------------A-----GCATCAGG--CGAACGAAAAGGAA-----T--AATTA-ATATGA-C--CTAGCTT--AAGAGAA----------GT---------------------------------------TATTAAGTTTTT-AATGT--TTTGCATGCCCA--AACAGATTTATTTTACTTGAT-------------TGAT-------------------AA-CGCTAGACCTAACCG-------------------ATAAAC---GATAACAGCAAC----------------ACATGGAGTTTTTTT-----TATAATTTAGACCAC---AGCGACAGAAGCGA--------------------------------A-------------------AGAAAA-----TCAACCAT------G-TAAAGTGTAAGA--ACCCAGTGAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................TTGAT-------------TGAT-------------------AA-CGCTAGACCTAACCG-------------------A...............................................................................................................................................................................................2718.00800000035000000000
.............................................................................................................................................................T--AATTA-ATATGA-C--CTAGCTT--AAGAGA....................................................................................................................................................................................................................................................................................................................................................................................2613.00300000003000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------G-TAAAGTGTAAGA--ACCC......1812.00200200000000000000
..................................................................................................................................................................................................................................................................................................TACTTGAT-------------TGAT-------------------AA-CGCTAGACCTAACCG-------------------A...............................................................................................................................................................................................3012.00200000011000000000
.................................................................................................................................................................................................................................................................................................TTACTTGAT-------------TGAT-------------------AA-CGCTAGACC.........................................................................................................................................................................................................................2412.00200200000000000000
...................................................................................................................................TCAGG--CGAACGAAAAGGAA-----T--AATTA-A............................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000000000011000
...................................................................................................................................TCAGG--CGAACGAAAAGGAA-----T--AAT................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200000000002000000
.......................................................................................................................................................................................................................................................................................................................TGAT-------------------AA-CGCTAGACCTAACCG-------------------ATAAAC---GA.....................................................................................................................................................................................2911.00100000000010000000
....................................................................................................................................................................................................................................................................................................................................................................................TAAAC---GATAACAGCAAC----------------ACATGGAGTT.................................................................................................................................................2711.00100000000100000000
..................................................................................................................................................................................................................................................................................................TACTTGAT-------------TGAT-------------------AA-CGCTAGACC.........................................................................................................................................................................................................................2311.00100000000010000000
...........................................................................................................AG-------------A-----GCATCAGG--CGAACGAAAAGGAA-----T--...................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
TTGACTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAA--ACAG-------------A-----...................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000010000
....................................................................................................................................................................................................................................................................................................CTTGAT-------------TGAT-------------------AA-CGCTAGACCTAACCG-------------------A...............................................................................................................................................................................................2811.00100000001000000000
................................................................................................................................................................................................................................................................................................TTTACTTGAT-------------TGAT-------------------AA-CGCTAGACCT........................................................................................................................................................................................................................2611.00101000000000000000
..............................................................T---------------------------------ATTTAAA--ACAG-------------A-----GCATCAGG--CGAACGA..................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
.........................................................................................................................................................................TGA-C--CTAGCTT--AAGAGAA----------.........................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
..............................................................................................................................................................................................................................................................................................ATTTTACTTGAT-------------TGAT-------------------AA-CGCTA.............................................................................................................................................................................................................................2311.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................AACCG-------------------ATAAAC---GATAACAGCAAC----------------ACA........................................................................................................................................................2611.00100000000001000000
.......................................................................................................................................................................................................................................................................................................GAT-------------TGAT-------------------AA-CGCTAGACC.........................................................................................................................................................................................................................1811.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-----TCAACCAT------G-TAAAGTGTAAGA--AC........2611.00100000000001000000
..............................................................T---------------------------------ATTTAAA--ACAG-------------A-----GCATCAGG--CGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
..................................................................................................................................ATCAGG--CGAACGAAAAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
......................................................................................................................................................................................................................................................................................................TGAT-------------TGAT-------------------AA-CGCTAGACCTAACCG-------------------A...............................................................................................................................................................................................2611.00100000001000000000
.................................................................................................TTTAAA--ACAG-------------A-----GCATCAGG--CGAACGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
...................................................................................................................................TCAGG--CGAACGAAAAGGAA-----T--AATT...............................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
......AAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAA--ACAG-------------A-----GCAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
...................................................................................................................................................................................................................................................................................................ACTTGAT-------------TGAT-------------------AA-CGCTAGACCTAACCG-------------------A...............................................................................................................................................................................................2911.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................T-------------------AA-CGCTAGACCTAACCG-------------------ATA.............................................................................................................................................................................................2111.00100001000000000000
.................................................................................................................................................................................................................................................................................................TTACTTGAT-------------TGAT-------------------AA-CGCTAGACCTAACCG-------------------A...............................................................................................................................................................................................3111.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................AGACCTAACCG-------------------ATAAAC---GAT....................................................................................................................................................................................2011.00100001000000000000
................................................................................................................................................................................................................................................................................................TTTACTTGAT-------------TGAT-------------------AA-CGCTA.............................................................................................................................................................................................................................2111.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................CG-------------------ATAAAC---GATAACAGCAAC----------------ACATGGA....................................................................................................................................................2711.00100000001000000000
...........................................................................................................................................................................................................................................................................................TTTATTTTACTTGAT-------------TGAT-------------------AA-CGCT..............................................................................................................................................................................................................................2511.00100000010000000000
..................................................................................................................................................................................................................................................................................................TACTTGAT-------------TGAT-------------------AA-CGCTAGACCTAAC.....................................................................................................................................................................................................................2711.00100000010000000000
.....................................................................................................................................................................................................................................................................................................TTGAT-------------TGAT-------------------AA-CGCTAGACCT........................................................................................................................................................................................................................2111.00100100000000000000
.....................................................................................................................................AGG--CGAACGAAAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000010000000000
droSec2
TTGACTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAA--ACGG-------------A-----GAATCAGG--CGAACGAAAGGGAA-----T--AATTA-ATCTGA-C--CTAGCTT--AAGAGAA----------GT---------------------------------------TATTAAGTTTTA-AATGT--TTTGCATGCCCA--AACAGATTTATTTTACTTGAT-------------TGAT-------------------AA-CGCTAGACCTAACTG-------------------ATAAAC---GATAACAGCAAC----------------ACATGGAGTTTTTTT-----TATAATTTAGACCAC---AGCGACAGAAGCGA--------------------------------A-------------------AGAAAA-----TCAACCAT------G-TAAAGTGTAAGA--ACCCAGTGAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................AATCAGG--CGAACGAAAGGGAA-----T--...................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................AACAGCAAC----------------ACATGGAGTT.................................................................................................................................................1911.0010010
..........................................................................................................................A-----GAATCAGG--CGAACGAAAGGGA............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
....CTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAA--ACGG-------------A-----G..................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
..................................................................................................................................ATCAGG--CGAACGAAAGGGA............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
........................................................................................................................................................................................................................................................................................................................................................................................C---GATAACAGCAAC----------------ACATGGAGTT.................................................................................................................................................2311.0010010
...............................................................................................................................................GAAAGGGAA-----T--AATTA-ATCT.........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TAAAGTGTAAGA--ACCCAGT...2011.0010010
..............................................................................................................................................................................................................................................................................................ATTTTACTTGAT-------------TGAT-------------------AA-CGCTA.............................................................................................................................................................................................................................2311.0010010
dm3
TTGACTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAAAAACAG-------------A-----GAATCAGG--CGAACGAAAAGGAA-----T--AATTA-ATATGA-C--CTAGCTTATAAGAGAA----------GT---------------------------------------TATTAAGTTTTTAAATGT--TTTGCATGCCCG--AACAGATTTATTTTACTTGAT---------TGATTGAT-------------------AA-CGCTAGATCTAACTG-------------------ATAAAC---GATAACAGCAAC----------------ACATGGAGTTTTTTT-TTTATATAATTTAGACCAC---AGCGATAGAAGCGA--------------------------------A-------------------AGAAAA-----TCAACCAT------G-TAAAGTTTAAGA--ACCCAGTGAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAGCGA--------------------------------A-------------------AGAAAA-----TCAACCAT------G-........................25131.00310000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000204000010400000000000000000000000000000000000000000000000000001002120000101000000000000000000000000000000000000000000000000000000000000000000000000002102000000113000000000000000100000000
..................................................................................................................................................................................................................................................................................................TACTTGAT---------TGATTGAT-------------------AA-CGCTAGATC.........................................................................................................................................................................................................................27124.00240000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070100000000000000000000000000000000000000000000000000000000000000000000100000000010003500000000000000000000000000000000000000000000000000000000000000000002100000000101000000000000000000000000
..............................................................T---------------------------------ATTTAAAAAACAG-------------A-----GAATCAGG--CGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................27124.00240000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000104000100000400000000000000000000000000000000000000000000000001000010000000030103120000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................TATGA-C--CTAGCTTATAAGAGAA----------GT---------------------------------------................................................................................................................................................................................................................................................................................................................................24117.00170000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100003000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000300000000212000000000000000100000010
..............................................................T---------------------------------ATTTAAAAAACAG-------------A-----GAATCAGG--CGAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................28112.00120000000000000000000000000000000000000000000000000000000000000000000000000000011010000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000102000000000012100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TACTTGAT---------TGATTGAT-------------------AA-CGCTAGA...........................................................................................................................................................................................................................25112.00120000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000100000000000001000000000000000003010000000000000000000000000000000000000000000000000000000000001000000000000000101000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TAGATCTAACTG-------------------ATAAAC---GATAACAGC..............................................................................................................................................................................27111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000020040010000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TA-ATATGA-C--CTAGCTTATAAGAGAA----------GT---------------------------------------................................................................................................................................................................................................................................................................................................................................27111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100003000000000000000000000000000000000000000000000000000000000000000010003000000000000000000000000000000000000000000000000000000000000000000000002000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................................TATTTTACTTGAT---------TGATTGAT-------------------AA-CGC...............................................................................................................................................................................................................................26110.00100000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000001000000000000000000200000
..........................................................................................................................................................................................................................................................................................................................T-------------------AA-CGCTAGATCTAACTG-------------------ATAAAC---GA.....................................................................................................................................................................................2619.0090000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010006010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................T--AATTA-ATATGA-C--CTAGCTTATAAGA......................................................................................................................................................................................................................................................................................................................................................................................2619.0090000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010302110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TAAAC---GATAACAGCAAC----------------ACATGGAGTT.................................................................................................................................................2719.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000001000100000010000100110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................TTTATTTTACTTGAT---------TGATTGAT-------------------AA-CGC...............................................................................................................................................................................................................................2818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000010000000000000000000000100000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................TCTAACTG-------------------ATAAAC---GATAACAGCAAC----------------A..........................................................................................................................................................2718.0080000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000102020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................G-------------------ATAAAC---GATAACAGCAAC----------------ACATGGAGT..................................................................................................................................................2817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAGAAGCGA--------------------------------A-------------------AGAAAA-----TCAACCAT------G-........................2717.0070000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TAAAC---GATAACAGCAAC----------------ACATGGAGT..................................................................................................................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002020000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................TTTACTTGAT---------TGATTGAT-------------------AA-CGCTAGA...........................................................................................................................................................................................................................2717.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002120000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................AA-CGCTAGATCTAACTG-------------------ATAAAC---GA.....................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000200200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGTTTAAGA--ACCCAGTGA.2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................T---------TGATTGAT-------------------AA-CGCTAGATCTAACTG-------------------A...............................................................................................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010102100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TTTACTTGAT---------TGATTGAT-------------------AA-CGCTA.............................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TGATTGAT-------------------AA-CGCTAGATCTAACTG-------------------A...............................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000203000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TAACAGCAAC----------------ACATGGAGTTTTT..............................................................................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................A-ATATGA-C--CTAGCTTATAAGAGAA----------GT---------------------------------------................................................................................................................................................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000001000000000000000000100000
......................................................................................................................................................................................TATAAGAGAA----------GT---------------------------------------TATTAAGTTTTTAAA.................................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................TTTAAAAAACAG-------------A-----GAATCAGG--CGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010102010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................T--TTTGCATGCCCG--AACAGATTTATTT.................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAC---AGCGATAGAAGCGA--------------------------------A-------------------AGAAAA-----........................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000010110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................AT-------------------AA-CGCTAGATCTAACTG-------------------ATAAAC---GA.....................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................CTTGAT---------TGATTGAT-------------------AA-CGCTAGATC.........................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................GA-C--CTAGCTTATAAGAGAA----------.........................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TAAAC---GATAACAGCAAC----------------ACATGGAGTTT................................................................................................................................................2814.0040000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................TTGAT---------TGATTGAT-------------------AA-CGCTAGATC.........................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000020000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................ACTTGAT---------TGATTGAT-------------------AA-CGCTAGATC.........................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TATAATTTAGACCAC---AGCGATAGAAGC.........................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010101010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACCAT------G-TAAAGTTTAAGA--ACCCAGT...2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TTATAAGAGAA----------GT---------------------------------------TATTAAGTTTT.....................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAGCGA--------------------------------A-------------------AGAAAA-----TCAACCA.................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................ATCAGG--CGAACGAAAAGGAA-----T--AAT................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TTGAT---------TGATTGAT-------------------AA-CGCTAGATCT........................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
...............................................................................................................................................................................................................................................................................................TTTTACTTGAT---------TGATTGAT-------------------AA-CGCTAGA...........................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TTACTTGAT---------TGATTGAT-------------------AA-CGCTAGATC.........................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TTTAAAAAACAG-------------A-----GAATCAGG--CGAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGACCAC---AGCGATAGAAGCGA--------------------------------A-------------------AGA................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC---AGCGATAGAAGCGA--------------------------------A-------------------AGAAAA-----TCA.....................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................CTAGATCTAACTG-------------------ATAAAC---GATAACAGC..............................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAT------G-TAAAGTTTAAGA--ACCCAGT...2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.........................................................................................................................................................................................................................................................................TGCATGCCCG--AACAGATTTATTTTACT.............................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TAACTG-------------------ATAAAC---GATAACAGCAAC----------------ACA........................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC---AGCGATAGAAGCGA--------------------------------A-------------------AGAAAA-----TC......................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TA-ATATGA-C--CTAGCTTATAAGAGAA----------G........................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TTACTTGAT---------TGATTGAT-------------------AA-CGCTAGA...........................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....TAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAAAAACAG-------------A-----...................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................T-TTTATATAATTTAGACCAC---AGCGA................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAC---AGCGATAGAAGCGA--------------------------------A-------------------G..................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................ATATGA-C--CTAGCTTATAAGAGAA----------GT---------------------------------------................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
................................................................................................................................................................................................................................................................................................TTTACTTGAT---------TGATTGAT-------------------AA-CGCTAGATC.........................................................................................................................................................................................................................2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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........AGTGAA-----------------------------------------------AT---------------------------------ATTTAAAAAACAG-------------A-----GAA................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................TGT--TTTGCATGCCCG--AACAGATTTATTT.................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AA-----------------------------------------------AT---------------------------------ATTTAAAAAACAG-------------A-----GAATCAGG--C........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAC---AGCGATAGAAGCGA--------------------------------A-------------------AGA................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TAGCTTATAAGAGAA----------GT---------------------------------------TATTAAG.........................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATATAATTTAGACCAC---AGCGATAGA............................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CAGCAAC----------------ACATGGAGTTTTTTT-T..........................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................GATAACAGCAAC----------------ACATGGAGTTTTT..............................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................GATAACAGCAAC----------------ACATGGAGTTTTTT.............................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAAC----------------ACATGGAGTTTT...............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
................................................................................................................................................................................CTAGCTTATAAGAGAA----------GT---------------------------------------TATTAAGT........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGAAGCGA--------------------------------A-------------------AGAAAA-----TCAACCAT------T-........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................TGCCCG--AACAGATTTATTTTACTTGAT---------................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TTA-ATATGA-C--CTAGCTTATAAGA......................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACCAC---AGCGATAGAAGCGA--------------------------------.......................................................................2211.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................CTAGATCTAACTG-------------------ATAAAC---GATAACA................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TGA-C--CTAGCTTATAAGAGAA----------GT---------------------------------------TATTAAGT........................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGA--------------------------------A-------------------AGAAAA-----TCAACCAT------G-TAAAGT..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TATAATTTAGACCAC---AGCGATAGA............................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------A-------------------AGAAAA-----TCAACCAT------G-TAAAGTT.................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................T---------------------------------ATTTAAAAAACAG-------------A-----GAATCAGG--CGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACCAC---AGCGATAGAAGCGA--------------------------------A-------------------AGA................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TTGACTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAAAAACAG-------------A-----...................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTGACTAAAGTGAA-----------------------------------------------AT-------------------------------TAAT-TAAA-AACAG-------------A-----GAATCAGGCACAAACGAAAAGGAA-----T--AATTA-ATACGACC--CTAGCTT--AAGAGAA----------GT---------------------------------------TATTAAGTTTTT-AATGT--TTTGCATGCCCC-AAACAGATTTATTTTACTTGAT-------------TGAT-------------------AA-CGCTAGATTTAACTGAT-------AAT------GAT-AAC---GATAACAGCAAC----------------ACATGGAGTTTTTTTTTTTATATAATTTAGACCAC---AGCGATAGAAGCGA--------------------------------A-------------------AGAAAA-----TCAACCGT------G-TAATGTGTAAGA--ACCCAGTGAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................T------GAT-AAC---GATAACAGCAAC----------------ACATGGAGT..................................................................................................................................................2811.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCGT------G-TAATGTGTAAGA--ACC.......2311.0010100000
..........................................................................................................................................................................................................GT---------------------------------------TATTAAGTTTTT-AATGT--TTTGCAT.....................................................................................................................................................................................................................................................................................................2611.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA--------------------------------A-------------------AGAAAA-----TCAACCGT------G-TAATGTG.................2511.0011000000
............................................................................................................................................................................................................................................................................................TTATTTTACTTGAT-------------TGAT-------------------AA-CGCTAGAT..........................................................................................................................................................................................................................2811.0011000000
.........................................................................................................................................................................CGACC--CTAGCTT--AAGAGAA----------G........................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT------G-TAATGTGTAAGA--ACCCAG....2111.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTTAGACCAC---AGCGATAGA............................................................................................................2311.0010001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TAATGTGTAAGA--ACCCAGT...2011.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCGT------G-TAATGTGTAAGA--ACCC......2411.0010100000
............................................................................................................................................................................................................................................................................................................................................................................................GATAACAGCAAC----------------ACATGGAGTTTT...............................................................................................................................................2411.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-----TCAACCGT------G-TAATGTGTAAGA--ACCCA.....2811.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................T-AAC---GATAACAGCAAC----------------ACATGGAGT..................................................................................................................................................2511.0011000000
.....................................................................................................................................................................................................................................................................................................................................................AGATTTAACTGAT-------AAT------GAT-AAC---GAT....................................................................................................................................................................................2511.0011000000
.........................................................................................................ACAG-------------A-----GAATCAGGCACAAACGAAAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGT------G-TAATGTGTAAGA--ACCCA.....2311.0010100000
..................................................................................................................................................................................................................................................................................................TACTTGAT-------------TGAT-------------------AA-CGCTAGATTTAAC.....................................................................................................................................................................................................................2711.0011000000
................................................................................................................................................................................................................................................................................................TTTACTTGAT-------------TGAT-------------------AA-CGCTAGATT.........................................................................................................................................................................................................................2511.0011000000
................................................................................................................................GAATCAGGCACAAACGAAAAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
droYak3
TTGACTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAC--GCAG-------------A-----GAATCAGG--CAAACGAAAAGGAA-----T--AATTA-ATACGA-C--CTAGCTT--AAGAGAA----------GT---------------------------------------TATTAAGTTTTT-AATGT--TTTGCATGCACC-AAATAGATTTATTTTACTTGAT-------------TGAA-------------------AA-CGCTAGATCTAACTG-------------------ATAAAC--TGATAACAGCAGC----------------ACATGGAGTT--TTT-----TATAATTTAGACCAC---AGCGATAGAAGCGA--------------------------------A-------------------AGAAAA-----TCAACCAT------G-TAAAGTGTAAAA--ACCCAGTGAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................AAAC--TGATAACAGCAGC----------------ACATGGAGT..................................................................................................................................................26112.0012000000000012
.....................................................................................................................................................................................TT--AAGAGAA----------GT---------------------------------------TATTAAGTT.......................................................................................................................................................................................................................................................................................................................2011.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................TGATAACAGCAGC----------------ACATGGAGT..................................................................................................................................................2211.00101000000000
...........GAA-----------------------------------------------AT---------------------------------ATTTAAC--GCAG-------------A-----G..................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC---AGCGATAGAAGCGA--------------------------------A-------------------AGAAAA-----........................................2411.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................C--TGATAACAGCAGC----------------ACATGGAG...................................................................................................................................................2211.00100000010000
.........................................................................................................................................................................................................................................................................................................................AA-------------------AA-CGCTAGATCTAACTG-------------------AT..............................................................................................................................................................................................2111.00100100000000
.......................................................................................................................................................................................................................................................................................................................TGAA-------------------AA-CGCTAGATCTAACTG-------------------ATA.............................................................................................................................................................................................2411.00100000010000
....................................................................................................................................................................A-ATACGA-C--CTAGCTT--AAGAGAA----------GT---------------------------------------T...............................................................................................................................................................................................................................................................................................................................2511.00100000010000
....................................................................................................AAC--GCAG-------------A-----GAATCAGG--CAAACGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
................................................................................................ATTTAAC--GCAG-------------A-----GAATCAGG--C........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
............................................................................................................................................................................................................................................................TTT-AATGT--TTTGCATGCACC-AAATA..........................................................................................................................................................................................................................................................................................2511.00101000000000
.................................................................................................................................................................................................................................................................................................TTACTTGAT-------------TGAA-------------------AA-CGCTAGATC.........................................................................................................................................................................................................................2411.00101000000000
.................................................................................................................................................................ATTA-ATACGA-C--CTAGCTT--AAGAGAA----------G........................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
....................................................................................................................................................................A-ATACGA-C--CTAGCTT--AAGAGA....................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGACCAC---AGCGATAGAAGCGA--------------------------------A-------------------AGAAA..............................................3011.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGC----------------ACATGGAGTT--T..............................................................................................................................................2011.00101000000000
.......................................................................................................................................................A-----T--AATTA-ATACGA-C--CTAGCTT--AAGAGAA----------.........................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
.................................................................................................................................................................................................................................................................................................................................................CGCTAGATCTAACTG-------------------ATAAAC--T.......................................................................................................................................................................................2211.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA--------------------------------A-------------------AGAAAA-----TCAACCAT------G-TAA.....................2111.00100000010000
droEug1
TTGACTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAA--CAAG-------------AAAAA-AAAACAAC--CAAACGGAAAGGA------TAAAATTA-ATACTA-T--TTAGCTT--AAGAGAA----------GT---------------------------------------TTTTAAGTTTTT-AATGT--TTTGCATGCCCCTACACAGATTCATTTTACTTGAT-------------TGAT-------------------AA-AGTTAGATCTAACTGATAACTGATAACC-----GATAAAC---GATAACAGCATC----------------TTCTGAAGTTTTTTT-TAAATATAATTTAGACCCC---AGCGATAAAAGCGA--------------------------------A-------------------CTA--A-----GCAACCAT------G-TAAAATGTAAGA-ATCCCAGTGAASizeHit CountTotal NormTotal
No Reads
droBia1
TTGACTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAA--AAAG-------------A-----AAAATAAC--CAAACGGAAAGAAA-----T--AATTA-GTACGA-C--TTAGCCT--AAGAGAA----------GT---------------------------------------TTTTAAGTTTTG-AATGT--TTTGCATGCCCC-GAACAGATTCATTTTACTCGAT-------------TGAT-------------------AA-CGCTAGATCTAACTTGT-------AACC-----GATAAAC---GATAACAGCAACC--C------------ATATGGAGTT--TTT-----TATGATTTAGACCCC---AGCGATAGAAGCGA--------------------------------AAACAAAAAAAA--CCACAAACA--A-----ACAACCAT------G-TTAAGTGTAAGA--ACCCAGTGAASizeHit CountTotal NormTotal
No Reads
droTak1
TTGACTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAAAACAAG-------------A-----AAAACAAC--CGAACGGA-AGGAA-----T--AATTA-ATACGA-C--TTAGCTT--AAGAGAT----------GT---------------------------------------TTTTAAGTTTTG-AATGT--TTTGCATGCCCG--AACAGATCCATTTTACTCGAT-------------TGAT-------------------AA-CGTTAGATCTAACTTTA-------GACC-----GATTAAC---GCTAACGGCAACATAC------------ATATGGAATT--TTT-----TATGATTTAGACCCC---AGCGATAGAAGCGA--------------------------------AAACAAAAAGAAAAACAAAAACTAAA----ACCAACCAT------G-TTAAGTGTAAGA--ACCCAGTGAASizeHit CountTotal NormTotal
No Reads
droEle1
TTGACTAATGTGAA-----------------------------------------------AT---------------------------------AATTAAC--AAAG-------------A-----AAA-------CAAACGGAAAGGAA-----T--AATCA-ATACGA-C--TAAGCTT--TAGAGAA----------GT---------------------------------------T-TTAAGTTTTT-AATGT--TTTGCATGCCCG--AAAAGATTCATTTTACTTGAT-------------TGAT-------------------AA-TGTTAGCTCTAACTG-------------------ATAACC---GATAACAGCAACA--C------------AAATGAAGT---TTT-----TATGATTTAGACCCCAAGAGAGAGAGAAGCGA--------------------------------A-------------------AAAAACAGAAAACAAGCAT------G-TAAAGTGTAAGA--AAACAGTGAASizeHit CountTotal NormTotal
No Reads
droRho1
TTGACTAAAGTGAA-----------------------------------------------AT---------------------------------ATTTAAC--AAAG-------------A-----AAA---AA--CAAACGGAAAGGAA-----T--AATTA-ATACGA-T--TTAGCTT--AAGAAAA----------GT---------------------------------------TTTTAAGTTTTT-AATGT--TATGCATGCCCG--AACAGATTTATTTTACTCGAT-------------TGAT-------------------AA-CGTTAGATCTAACTGAT-------AACC-----CATAAAC---GATAACAGCAACA--C------------ATATGGAGTT--TTT-----TATGATTTAGACCCCA--AGCGAGAGAAGCGA--------------------------------A-------------------AAAA-------ACAACCCT------G-TAAAGTGTAAGA--ACCCAGTGAASizeHit CountTotal NormTotal
No Reads
droFic1
TTGACTAAAATGAA-----------------------------------------------CT---------------------------------ACTAAAA--AAAG-------------A-----A---TAA---CTAACTGGAAGAAA-----T--AATAC-ATAGGTTT--TTAGCTT--AAGCAAA----------GT---------------------------------------TTCTAAGTTTTA-CATGT---TTGCATGCCCG--AAATTTTTCATTTTACTCAAT-------------TGAT-------------------AC-CGTTTGTTCCAAGT--------------------------------------AA----C------------ATATGAAGTT--TTG-----TATGATTTGGACC----------------------------------------------------------------------------------------AT------G-TGCAACACCAACACCCCTAGTGAASizeHit CountTotal NormTotal
No Reads
droKik1
TTGACTAAAAC----------------------------------------------------------------------------------------------------------CGA---AAGA-AGACCAGA-TCGGACGGG-GGGAT-----TACAATTAAATACGA----TTAGTTT--AAGAGAAAGCCTCCTTTTT---------------------------------------TATTAAGTTTTT-AATGTTTTTTGCATGCCCG-GAACAGGTTCATTTTACTCGATGATTACTTTTGATTGAT-------------------AAACGATAG------CTGGC-------AATC-----GATACCCATCGATAACAGCGT------------------TATTGAATT--TTT-----AATGATTTAGACA-A---AGCAA-AGAAGCGA--------------------------------A-------------------A----A----ACC--CCAT------G-TAAAGTGTAAGA--ATCCAGTGAASizeHit CountTotal NormTotal
No Reads
droAna3
ATAACTAAACAAGA-----------------------------------------------AC---------------------------------TTTTAAAATATTGACAAACACTGAAAA--GGAAAAAT--A-TAGAAGAGAAAG-AA-----TTC--AAC-ATATTTTT--TTAGCCT--AAGAGAAG---------AG---------------------------------------TTTTAAGTTTT--AATAT--TTTGCTAACTTG--ATCAGCTATGATTTA--AAAT-------------TTGT-------------------AA-TTTTAATTTAAAATG-------------------TT-GTT---GAACACATCA-----C------------ATATTGAATT--TTT-----TATGATTTAGACA-A---A---------GTTT--------------------------------A-------------------AGAAAA-----AC--TGTT------G-TACAATTTAAGA-AACCCAGTGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................TTT--TTAGCCT--AAGAGAAG---------A........................................................................................................................................................................................................................................................................................................................................................................1911.001000010
........................................................................................................................................................................................................................................................................TTGCTAACTTG--ATCAGCTATGAT..................................................................................................................................................................................................................................................................................2311.001000010
...................................................................................................................................................................AC-ATATTTTT--TTAGCCT--AAGAGAAG---------A........................................................................................................................................................................................................................................................................................................................................................................2611.001000001
................................................................................................................................................................................TTAGCCT--AAGAGAAG---------AG---------------------------------------TTTTAAGT........................................................................................................................................................................................................................................................................................................................2511.001000001
..................................................................................................................................................................................................................................................................................................................................................TTTAATTTAAAATG-------------------TT-GTT---.......................................................................................................................................................................................1911.001010000
...................................................................................................................................AT--A-TAGAAGAGAAAG-AA-----TT....................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTAGACA-A---A---------GTTT--------------------------------A-------------------AGA................................................2011.001000001
......................................................................................................................................................................ATATTTTT--TTAGCCT--AAGAGAAG---------AG---------------------------------------T...............................................................................................................................................................................................................................................................................................................................2611.001010000
..........................................................................................................................A--GGAAAAAT--A-TAGAAGAGAAAG-AA-----......................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
..................................................................................................................................AAT--A-TAGAAGAGAAAG-AA-----TT....................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
droBip1
TTGACAAAAAAAAA-----------------------------------------------AC------------------------------------------------------TGA---AAGGAA--AT--G-TAGAAGAAAAAGGAAAACAATAC--AAC-ATATTTTTTGTTAGACT--AAGAGAAGA--------GT---------------------------------------TTTTAAGTTTT--AATAT--TCTGCTAACTTG--ATATGTTTT---------GAT-------------TTAA-------------------AA-TTTTATTACTCG----------------------TT-ATT---GAACACATCA-----C------------ATATTGAATT--TTT-----TATGATTTAGACA-A---A---------GTTT--------------------------------A-------------------AGAAAA-----AC--TGTT------G-TATAATTTAAGA-AACCCAGTGAASizeHit CountTotal NormTotal
No Reads
dp5
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAT--AAGAGAAA---------GT---------------------------------------TTTTAAGTTTT--AATGTT-TTTGCATGCCTG-AAAAACGTTTATTTTACTCGATGATT-CTGTTGTTTGAT-------------------TA-CGTTAG--------------------CC-----AATAGCC---GATAGCAGCG-----C------------ATATTGAAATGATTT-----TATGATTTAGACA-A---AGCAAAAGAAGCAACCCACAAACTCACACAAAGCAAAACAAAACCAAAACAAAAACAAAAAAGAAAAGAAAA-----AC--CAAT------G-TAAAGTGTAAGA--ACCCAGTGAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................T--AAGAGAAA---------GT---------------------------------------TTTTAAGTTTT--AA.................................................................................................................................................................................................................................................................................................................2415.0050000000500
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----TATGATTTAGACA-A---AGCAAAAGAAG..........................................................................................................2712.0020000000200
..............................................................................................................................................................................................................................................................................................ATTTTACTCGATGATT-CTGTTGTTTGAT-------------------.....................................................................................................................................................................................................................................2811.0010100000000
................................................................................................................................................................................................................................................................AATGTT-TTTGCATGCCTG-AAAAACGTT......................................................................................................................................................................................................................................................................................2711.0010001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------G-TAAAGTGTAAGA--ACC.......1811.0010000010000
............................................................................................................................................................................................................................................................................................TTATTTTACTCGATGATT-CTGTTGTT............................................................................................................................................................................................................................................................2611.0010010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAAAA-----AC--CAAT------G-TAAAGT..................2111.0010010000000
droPer2
TTGACAAAACTGAACCCAGGCCAGGAAGGCACACACACACAACCTCCCCTAGAACACCTAGATATCCATCCCCACCAGAACCGAGCAGAGCGGA--ACCGAAGAGAATGATACGGAAGCGGAA-----ACG-------GAAA-----CAGAA-----G--CAGAA-GTACAT-T--TAAGCAT--AAGAGAAA---------GT---------------------------------------TTTTAAGTTTT--AATGTT-TTTGCATGCCTG-AAAAACGTTTATTTTACTCGATGATT-CTGTTGTTTGAT-------------------TA-CGTTAG--------------------CC-----AATAGCC---GATAGCAGCG-----C------------ATATTGAAATGATTT-----TATGATTTAGACA-A---AGCAAAAGAAGCAACCCACAAACTCACACAAAGCAAAACAAAACCAAAACAAAAACAAAAAAGAAAAGAAAA-----AC--CAAT------G-TAAAGTGTAAGA--ACCCAGTGAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........ACTGAACCCAGGCCAGGAAGGCACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
.......AACTGAACCCAGGCCAGGAAGGCACACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
............................................................................................................................................................................................................................................................................................................................................................................................GATAGCAGCG-----C------------ATATTGAAATGA...............................................................................................................................................2311.001001000
........................................................................................................................................................................................................................................................................................................................................................................................C---GATAGCAGCG-----C------------ATATTGAAATGAT..............................................................................................................................................2511.001010000
...................................................................................................................................................................................................................................................TTTTAAGTTTT--AATGTT-TTTGA.......................................................................................................................................................................................................................................................................................................2211.001001000
...................................................................................................GAAGAGAATGATACGGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000010
..................................................................................................................................................................................................................................................................................G-AAAAACGTTTATTTTACTCGATGATT-....................................................................................................................................................................................................................................................................2711.001010000
droVir3
TTATTAA-GCAAGC-----------------------------------------------GA---------------------------------ACTTTAGTTTTTAATATGCAACAAAAA-----AAA-------AAAAGAAAAAAGAA-----T----------GTAA---------------ACAAA--------TTTCTGTTAAATTTAATATTCATTGCGTAGCTTAAGTCAACAATTTGTTGTTT----------------------------------------------------------TTATTACATTTTATTATATTGACAA-ACCAAGGCCAGGAAGGC-------AACTAGAACAA-CAAC---AACAACAACAACA--AATAACAAGTTAACCATTAAGTTTTTTT-TTAAGCTAATTTCTAACTGAACAACGCTTCAAGCTC--------------------------------A-ACAAAAAGAA--------AGAAAA-----TT---ATTGTGCATGCTAAAATTTAAAA--ATTAACGTAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAAAGAA--------AGAAAA-----TT---ATTGTGCA...........................2611.001000000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................AA-ACCAAGGCCAGGAAGGC-------AACT......................................................................................................................................................................................................2311.001000000000000000000000000000000100000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TATTACATTTTATTATATTGACAA-AC................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ACAA-ACCAAGGCCAGGAAGGC-------..........................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GACAA-ACCAAGGCCAGGAAGG..................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
........GCAAGC-----------------------------------------------GA---------------------------------ACTTTAGTTTTTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000001000000000000000000000000000
..........................................................................................................................................................................................................................TTCATTGCGTAGCTTAAGTCA....................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAA-----TT---ATTGTGCATGCTAAA....................2311.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGAACAACGCTTCAAGCTC--------------------------------.......................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GAACAA-CAAC---AACAACAAC..............................................................................................................................................................................19200.153003000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................ACAA-CAAC---AACAACAACAACA--AATA....................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................AACAA-CAAC---AACAACAACAACA--AA......................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................AAAAA-----AAA-------AAAAGAAAAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GAACAA-CAAC---AACAACAACAAC...........................................................................................................................................................................22200.051000100000000000000000000000000000000000000000000000000000000000
droMoj3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--ACCCAGTGAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--AACCAGTGAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 05:39 AM