ID:

dsi_3072

 Coordinate:

2l:21852433-21852582 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+

Sense Strand Reads

GCGCAAGCACTCTTTGAAAATTTTTTTTTAAATTTTTTCTCATTTTATTCCCCAACATCTATGGATATGCCAGAATAATTATAAAATTTGGCGTTCTCGCTTTTACTAGCTGAGTACCGTGTTTCGTGTAGTCAGGGTATTCTCTCTCTTGTTCTTATTATTATTTGTTCATCAATTGTTATTGGTCTTCTACACTGCAGGAGGGAATTGTTATGGATCCCATGACCTACAGCGAAAAGCGTTCACGTCA
**************************************************.(((.......)))..((((((((............)))))))).((((((......))).))).....(((...((((((..((((......)))).......................((((((....))))))...)))))).))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR553487
NRT_0-2 hours eggs
 M053
female body
 M025
embryo
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
...........................................................................................................................TCGTGTAGTGAGGGCCTT............................................................................................................. 18 3 20 1.40 28 22 0 1 0 0 0 5 0 0 0
...........................................................................................................................................................................................................GGAATTGTTATGGATCCCAT........................... 20 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TATGGATACCATGACCTCC.................... 19 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................AGAGGGGAATTGTTATGGACC............................... 21 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0
...................................TTTCTCATTTTATTCCCCAACATCT.............................................................................................................................................................................................. 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATGACCTATAGCGAA.............. 15 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0
...................ATTTTTTTTTTAATTTTTTCTCATT.............................................................................................................................................................................................................. 25 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................TTCGTGTAGTGAGGGCCTT............................................................................................................. 19 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................GTCGTGTAGTGAGGGTCTT............................................................................................................. 19 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
GCGAAAGCACTCTTTGACAG...................................................................................................................................................................................................................................... 20 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................GTTTCCTGCAGTCAGGGT................................................................................................................ 18 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................TCGTGTAGTGAGGGTCTTG............................................................................................................ 19 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGAAGGGAATTGTTATCTAT................................ 20 3 17 0.06 1 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................TATTATTTGTACATCACTGG........................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................CTAGACTGCAGGACGG............................................. 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0
...............................CTTTTTTCTCATTTTATTCCCC..................................................................................................................................................................................................... 22 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................GTGTCGTGTAGTGAGGGC................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0
.CGCTAGCACCCTTTGA......................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CGCGTTCGTGAGAAACTTTTAAAAAAAAATTTAAAAAAGAGTAAAATAAGGGGTTGTAGATACCTATACGGTCTTATTAATATTTTAAACCGCAAGAGCGAAAATGATCGACTCATGGCACAAAGCACATCAGTCCCATAAGAGAGAGAACAAGAATAATAATAAACAAGTAGTTAACAATAACCAGAAGATGTGACGTCCTCCCTTAACAATACCTAGGGTACTGGATGTCGCTTTTCGCAAGTGCAGT
**************************************************.(((.......)))..((((((((............)))))))).((((((......))).))).....(((...((((((..((((......)))).......................((((((....))))))...)))))).))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
..AGTTCGTGAGAAACT......................................................................................................................................................................................................................................... 15 1 13 1.08 14 13 0 0 1 0
..............................................................CCTATTCGGGCTTATTAA.......................................................................................................................................................................... 18 2 5 0.20 1 0 0 1 0 0
.....TCGTGAGAAACTGATAGAAAA................................................................................................................................................................................................................................ 21 3 5 0.20 1 1 0 0 0 0
........................................GTAAAATAAGGGGTTGTAGAT............................................................................................................................................................................................. 21 0 5 0.20 1 0 1 0 0 0
................................AAAAAAGAGTAAGATAAGGGGTTGT................................................................................................................................................................................................. 25 1 6 0.17 1 0 1 0 0 0
..........................................AAAATAAGGGGTTGT................................................................................................................................................................................................. 15 0 7 0.14 1 0 1 0 0 0
............................................................................................................................................AGAAAGAGAACACGAATAA........................................................................................... 19 2 10 0.10 1 1 0 0 0 0
.....................................................................................................................GGACAAAGCATATCAGT.................................................................................................................... 17 2 11 0.09 1 1 0 0 0 0
......................................................................................................................CAGAAAGCACATCAGGACC................................................................................................................. 19 3 19 0.05 1 0 0 1 0 0
........................AAAAATTTAAAAAAGAGTAAAACAAGGGTTT................................................................................................................................................................................................... 31 2 20 0.05 1 0 0 0 0 1
...........................................................................................................................................TAGGGAGAGTACAAGAAT............................................................................................. 18 3 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:21852383-21852632 + dsi_3072 GCGCAAGCACTCTTTGAAAATTT----------------------------------------TTTT-----------TTAAATTTTTTCTCATTTTATTCCCC-------------AACATCTATGG---A---TATGC-CAGAATAATTATAAA----------------------------------------------------ATTTGGCGTTCT-----------------------CGCTTTTACTAG--CTGAGTACCGTGTTTCGTGTAGTCAGGGTATTCTCTCTCTTGTTCTTA------------------------------------------------------------------------------------------------------------------------------------------------------------TTA----TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTG-------TTCATCAA--T---------------TGTTATTGGTC-----------TTCTACACTGCAGGAGGGA-ATTGTTATGGATCCCATGAC---------CTACAGCGAAAAGC----GTTCACGTCA
droSec2 scaffold_41:210857-211111 - GCGCAAGCACTCTTTGAAAATTT-----------------------------------------TTT-----------TTAAATTTTTTCTCATTTTATTTTCC-------------AACATCTATGG---A---TAAAAAAAGAATAATTATAAA----------------------------------------------------ATTTGGCGTTCT-----------------------CGCTTTCACTAG--CTGAGTACCGTGTTTCGTATAGTCAGGGTATTCTCTCTCTTGTTCTTA------------------------------------------------------------------------------------------------------------------------------------------------------------TTA----TTATGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTG-------TTCATCGA--T---------------TGTTATTGGTC-----------TTCTACACTGCAGGAGGGA-ATTGTTATGGATCCCATGAC---------CTACAGCGAAAAGC----GTTCACGGCA
dm3 chr3L:23323140-23323376 - GCGCAAGTTTGTTGCC-ACGCC-------------------------------------------------------CAC-------------------TCTTTCACCCA--CAAAAC--------------GC-----------------------------------------------------CCAAACCTGCCACGCCCACACTTTTCGCGTTTT-----------------------CGCTTCCACTAG--CTTAGTACCGTGCATCGGATAGTCAGGGAATTCTCTCTCT---------------------------------------------------------------------------------------------------------------------------------------------------------CTTGTTTTTTATTA----TAATGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTA-------TTCTCCGA--T---------------TATTATTGGAC-----------TTCTACACTGCAGGAAGGA-ATTGTTATGGATCCCATGAC---------CTACAGCGAAAAGC----GTTCACGTCA
droEre2 scaffold_4784:22830118-22830390 + ATATACTCT----CTGAGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATTTTTATAAAGGGTAAGACATTTATTTTATCATTAGATTAGTTTCTAAAAATAAACTATAAATTGCTATATCTTCGAGTGTAACGTGTGTATCTTATATTAGGAATCGCTTAAATTCGGTATTTTGATCTATTCCTATATATTTTTTTATTGTGTTGCTTATGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTC-------TTATCCGA--T---------------ACTTATCGGTC-----------TTTGACACTGCAGGAGGGA-ATTGTAATGGATCCGATGAC---------CTACAGCGAGAAGC----GTTCACGCCA
droYak3 2R:692856-693131 + ACGCCCACACTTTTTAAACATTTTAAATTTTTTTTTCCTTT------------------------------------------------TTTAATTCTTTTTTT-----------TATATTTCTATCA---A---CATGC-CAGACAAATTTGTAA----------------------------------------------------ATTTCTTGTTCG-----------------------CACTTCCACAAG--CTGAGTAACGGGTATTTGATAGTCGGGGAACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACTTTAGCGTTTTCTCTTGTTTAATTTTTTCC------A--GAAAAATTGGATTTTTTTTTTGTTCGCAGTT-----------CCTTAAGCTGAGTAACGGGTA----TATGACTATAACGAT---------TTATCTTGTTAAACATAAATTGAAATCT
droEug1 scf7180000409714:3976-4058 + TCATTAATTTGAATTT-G-T-------------------------------------------------AAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTCTGCAGGAAGGA-ATTGTTATGGATCCTATGAC---------CTACAGCGAGAAGC----GTTCACGCCA
droBia1 scf7180000302073:23765-23966 - GTTTTCTATTATTAAT-TTATT--------------------------------------------------ATTTTTATA-A---TTA----TTATTATTTTTAATTTTTTTTTATTATTTTTATTG---T------------------------------------------------------------------------------------------------------------------TATTATTA----TTATTATTATTTTTATTATTTTTTTATTATTATTTTTATTATTATTT------------------------------------------------------------------------------------------------------------------------------------------------------------TTA----TTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTT-------------------------------------------------------------------TTTTATT-ATTATTATTATTTCTATTATTTTTACTATTATTATTTTTATTATTATTATTATTTTT
droTak1 scf7180000413991:7183-7514 - GCCATGTCCGTCTCCGACTATAAAAGCTAG-----------AAGATTGACATTTTGCATGCAGATTC-----------TAGAATGCAGTTTTATTGTGTTTATC-------------AATACCTATCA---A---AATGTAGAAGACATTTTTTAAATCGGACCATTTGTTAAAAAGTTACGGCGGATCAA-----------------------------AGTTTTTATCTCCATCTCCTTCGCACTCCCTGTAG--CTGAGTAACGGGTATCTGATAGTCGGGGCACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACTATAGCGTTCTCTCTTGTTATACCCGTTACTCGTATAGTAA--A--AGGAT----------ATATTAGATTCGTGCAAAAGTATGTAACAGCTAGAAGGA-AGCGTTTCCGACCCCATAAA---------GTATA-----------------------
droEle1 scf7180000490380:57999-58102 + TTCTTGATTTCATTTATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATAATTTTTCCCAA--------------------CG---------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------T----TTT--------------TTCATGGTTGCAGGAAGGA-ATTGTTATGGATCCGATGAC---------CTATAGCGAAAAGC----GTTCAAGACA
droRho1 scf7180000771221:8116-8230 - TGCTTCCATTCTTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT-----------------------------------------------------------------------------------------------------------------------------------------------------------AATTA----ATATACGAATTTTTTACA--------------------CA---------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------T----TTGTTC-----------TTGAATGCTGCAGGAAGGA-ATTGTTATGGATCCCATGAC---------ATATAGCGAGAAGC----GTTCACGACA
droFic1 scf7180000453445:2493-2561 + TATTTATTTTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTCAGGAAGGC-ATCGTAATGGATCCTATGAC---------CTATAGCGAAAAGC----GTTCGCGACA
droKik1 scf7180000297728:3676-3770 - TTTCTAATATTATCTGCAAT-------------------------------------------------AACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTT-----------TATAATACTATAGGAAGGA-ATCGTAATGGATCCCATGAC---------ATATAGCGAACAGC----GTTCGCGTCA
droAna3 scaffold_13082:3611295-3611349 + T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGGAAGGC-ATTGTCATGGACCCTATGAC---------TTATAGCGAAAAAC----GATCTCGTCA
droBip1 scf7180000395020:24214-24292 + GGGGAAATACAATTAAAAAT-T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTTTTCGAA--------------------AAATTTTTTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTAATGTACTCTA---A---------ATATATCTGAGA------------ATAA
dp5 3:11988598-11988775 + GTGTACCACAGTTTAA-ATATAT----------------------------------------ATATGTAAAC-----------AGATA----TATAGGCCCTTGATATCAGCAGATG---ACTATGACTGAGCTTAAGGACGGCGTACAAATAGG----------------------------------------------------GTTGGTAGTGTG-----------------------CACTCTTGCTAGGCTCGAGTCTAGCTCGCCGGATGGTCGGGGTTCTTCCTCACCTAATTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATCGT
droPer2 scaffold_3:980767-980858 - ATTATTTGCTCT---CA---TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGT-AAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAA-TGTGTAGGAAGGT-ATTGTTATGGATCCCATGAC---------CTACAGTGAGAAGC----GTTCTCGTCA
droWil2 scf2_1100000004515:775075-775256 - GCCGAAGTTAACTTCT-T-T-------------------------------------------------GATATTTTTTTA-G---TTA----AAACAATTTTTTTCTTT--CTTTTT--------------AT-----------------------------------------------------TTTTATTTATTTGTTGTGTATTTTTTGTGTTTTTCTTTTTGTTTCTTTTTTCTTTATTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTTGGTATTTTCCTTTTTTTCTTTCTTTTATTTTCTTTTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------G---------------TTTTATTTT----------------------------------------------------------------------------------TCTTTTAC
droVir3 scaffold_12958:975036-975149 - GTGGGGGTTTTTTTTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAAATCTTATTACTGTGTGATTAATTGCTTATACA-----------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------------------------------TTTTTAGGAGGGT-ATTATAATTGATCCCATGAC---------ATACAGTGATAAAC----GGTCACGTCA
droMoj3 scaffold_6498:1848159-1848321 - CTTCAATTTTTTTTCGAATGTCCGTATTTATTTATTTATTT------------------------------------------------ATTTATTTATTTCTT--------------AAAGCTATTG---A---CAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGAGTCAATTTT-----AATTTGCTCGAAGGGTTCAGCGGATCTCGTAGTCGAGCAGTCACGACTAGAGCTTTCTTACTTGTTAT---------------------------------------------------------------------------------------------------------------------------------TAATAGTA
droGri2 scaffold_14853:8623099-8623279 + GAGCTAGAAACTTCAA-GTTTCT------------------------------------------TA-----------AT--A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAG--TTCTC----------------------------------TTAGTTTGTCCCCTTTTCGATGCATAAAATAATAATCATATTTGGCAGTCAAACTATATTATATTTAATAGTCGGGCCGAGGGTATATCGTAGT----------TGATTACAGCCTTTTTACTTGAGTTTTTTCTTT--------------A---------------TTTTATTTT----------------------------------------------------------------------------------CACTTGTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCGCAAGCACTCTTTGAAAATTT----------------------------------------TTTT-----------TTAAATTTTTTCTCATTTTATTCCCC-------------AACATCTATGG---A---TATGC-CAGAATAATTATAAA----------------------------------------------------ATTTGGCGTTCT-----------------------CGCTTTTACTAG--CTGAGTACCGTGTTTCGTGTAGTCAGGGTATTCTCTCTCTTGTTCTTA------------------------------------------------------------------------------------------------------------------------------------------------------------TTA----TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTG-------TTCATCAA--T---------------TGTTATTGGTC-----------TTCTACACTGCAGGAGGGA-ATTGTTATGGATCCCATGAC---------CTACAGCGAAAAGC----GTTCACGTCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGA-ATTGTTATGGATCCCAT........................................2020.50100010000000000000
......................................................................................TTTCTCATTTTATTCCCC-------------AACATCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.33100000000100000000
droSec2
GCGCAAGCACTCTTTGAAAATTT-----------------------------------------TTT-----------TTAAATTTTTTCTCATTTTATTTTCC-------------AACATCTATGG---A---TAAAAAAAGAATAATTATAAA----------------------------------------------------ATTTGGCGTTCT-----------------------CGCTTTCACTAG--CTGAGTACCGTGTTTCGTATAGTCAGGGTATTCTCTCTCTTGTTCTTA------------------------------------------------------------------------------------------------------------------------------------------------------------TTA----TTATGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTG-------TTCATCGA--T---------------TGTTATTGGTC-----------TTCTACACTGCAGGAGGGA-ATTGTTATGGATCCCATGAC---------CTACAGCGAAAAGC----GTTCACGGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
GCGCAAGTTTGTTGCC-ACGCC-------------------------------------------------------CAC-------------------TCTTTCACCCA--CAAAAC--------------GC-----------------------------------------------------CCAAACCTGCCACGCCCACACTTTTCGCGTTTT-----------------------CGCTTCCACTAG--CTTAGTACCGTGCATCGGATAGTCAGGGAATTCTCTCTCT---------------------------------------------------------------------------------------------------------------------------------------------------------CTTGTTTTTTATTA----TAATGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTA-------TTCTCCGA--T---------------TATTATTGGAC-----------TTCTACACTGCAGGAAGGA-ATTGTTATGGATCCCATGAC---------CTACAGCGAAAAGC----GTTCACGTCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................CGCGTTTT-----------------------CGCTTCCACTAG--C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGAC---------CTACAGCGAAAAGC----GTTC......2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAC---------CTACAGCGAAAAGC----GTTT......2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCATGAC---------CTACAGCGAAAAGC----GTT.......2613.0030000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------TATTATTGGAC-----------TTCTACACTGCAA................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200
...........................................................................................................................................................................................................CACACTTTTCGCGTTTT-----------------------CG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAC---------CTACAGCGAAAAGC----GTTC......2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---------CTACAGCGAAAAGC----GTTC......2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAC---------CTACAGCGAAAAGC----GTTCAC....2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AGTACCGTGCATCGGATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TCGGATAGTCAGGGAATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGATCCCATGAC---------CTACAGCGAAT.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................AGTCAGGGAATTCTCTCTCT---------------------------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGGATCCCATGAC---------CTACAGCGAA..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TCAGGGAATTCTCTCTCT---------------------------------------------------------------------------------------------------------------------------------------------------------CTTGT.......................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TCGGATAGTCAGGGAATTCTCTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGA-ATTGTTATGGATCCCATGAC---------CT..........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGA-ATTGTTATGGATC............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------TATTATTGGAC-----------TTCTACACTGCA.................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTATTGGAC-----------TTCTACACTGCAG................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------CTACAGCGAAAAGC----GTTCA.....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCGAAAAGC----GTTCACG...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAGCGAAAAGC----GTTCAC....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCCCATGAC---------CTACAGC.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGGAC-----------TTCTACACTGCA.................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTATTGGAC-----------TTCTACACTG...................................................................2111.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGAC---------CTACAGCGAAAAGC----GTT.......2411.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTATGGATCCCATGAC---------CTACAGCGA...................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAC---------CTACAGCGAAAAGC----GTTC......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAC---------CTACAGCGAAAAGC----GTTC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................GTACCGTGCATCGGATAGTCAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTGGAC-----------TTCTACACTGCAG................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACTGCAGGAAGGA-ATTGTTATGGA..............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTATGGATCCCATGAC---------CTACAGCGAAA.................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................CCAAACCTGCCACGCCCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATATACTCT----CTGAGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATTTTTATAAAGGGTAAGACATTTATTTTATCATTAGATTAGTTTCTAAAAATAAACTATAAATTGCTATATCTTCGAGTGTAACGTGTGTATCTTATATTAGGAATCGCTTAAATTCGGTATTTTGATCTATTCCTATATATTTTTTTATTGTGTTGCTTATGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTC-------TTATCCGA--T---------------ACTTATCGGTC-----------TTTGACACTGCAGGAGGGA-ATTGTAATGGATCCGATGAC---------CTACAGCGAGAAGC----GTTCACGCCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-ATTGTAATGGATCCGATGAC---------CTAC........................2511.0010000010
droYak3
ACGCCCACACTTTTTAAACATTTTAAATTTTTTTTTCCTTT------------------------------------------------TTTAATTCTTTTTTT-----------TATATTTCTATCA---A---CATGC-CAGACAAATTTGTAA----------------------------------------------------ATTTCTTGTTCG-----------------------CACTTCCACAAG--CTGAGTAACGGGTATTTGATAGTCGGGGAACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACTTTAGCGTTTTCTCTTGTTTAATTTTTTCC------A--GAAAAATTGGATTTTTTTTTTGTTCGCAGTT-----------CCTTAAGCTGAGTAACGGGTA----TATGACTATAACGAT---------TTATCTTGTTAAACATAAATTGAAATCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................TTCG-----------------------CACTTCCACAAG--CTGAGTAACGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28201.3527010000000026
...................................................................................................................................................................................................................................................CACTTCCACAAG--CTGAGTAACGGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.45900000000009
..........................................................................................................................................................................................................................CG-----------------------CACTTCCACAAG--CTGAGTAACGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10202000000000
....................................................................................................................................................................................................................................................ACTTCCACAAG--CTGAGTAACGGGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000010000
........................................................................................................................................................................................................................TTCG-----------------------CACTTCCACAAG--CTGAGTAACGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000000001
droEug1
TCATTAATTTGAATTT-G-T-------------------------------------------------AAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTCTGCAGGAAGGA-ATTGTTATGGATCCTATGAC---------CTACAGCGAGAAGC----GTTCACGCCASizeHit CountTotal NormTotal
No Reads
droBia1
GTTTTCTATTATTAAT-TTATT--------------------------------------------------ATTTTTATA-A---TTA----TTATTATTTTTAATTTTTTTTTATTATTTTTATTG---T------------------------------------------------------------------------------------------------------------------TATTATTA----TTATTATTATTTTTATTATTTTTTTATTATTATTTTTATTATTATTT------------------------------------------------------------------------------------------------------------------------------------------------------------TTA----TTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTT-------------------------------------------------------------------TTTTATT-ATTATTATTATTTCTATTATTTTTACTATTATTATTTTTATTATTATTATTATTTTTSizeHit CountTotal NormTotal
No Reads
droTak1
GCCATGTCCGTCTCCGACTATAAAAGCTAG-----------AAGATTGACATTTTGCATGCAGATTC-----------TAGAATGCAGTTTTATTGTGTTTATC-------------AATACCTATCA---A---AATGTAGAAGACATTTTTTAAATCGGACCATTTGTTAAAAAGTTACGGCGGATCAA-----------------------------AGTTTTTATCTCCATCTCCTTCGCACTCCCTGTAG--CTGAGTAACGGGTATCTGATAGTCGGGGCACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACTATAGCGTTCTCTCTTGTTATACCCGTTACTCGTATAGTAA--A--AGGAT----------ATATTAGATTCGTGCAAAAGTATGTAACAGCTAGAAGGA-AGCGTTTCCGACCCCATAAA---------GTATA-----------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TTCTTGATTTCATTTATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATAATTTTTCCCAA--------------------CG---------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------T----TTT--------------TTCATGGTTGCAGGAAGGA-ATTGTTATGGATCCGATGAC---------CTATAGCGAAAAGC----GTTCAAGACASizeHit CountTotal NormTotal
No Reads
droRho1
TGCTTCCATTCTTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT-----------------------------------------------------------------------------------------------------------------------------------------------------------AATTA----ATATACGAATTTTTTACA--------------------CA---------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------T----TTGTTC-----------TTGAATGCTGCAGGAAGGA-ATTGTTATGGATCCCATGAC---------ATATAGCGAGAAGC----GTTCACGACASizeHit CountTotal NormTotal
No Reads
droFic1
TATTTATTTTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTCAGGAAGGC-ATCGTAATGGATCCTATGAC---------CTATAGCGAAAAGC----GTTCGCGACASizeHit CountTotal NormTotal
No Reads
droKik1
TTTCTAATATTATCTGCAAT-------------------------------------------------AACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTT-----------TATAATACTATAGGAAGGA-ATCGTAATGGATCCCATGAC---------ATATAGCGAACAGC----GTTCGCGTCASizeHit CountTotal NormTotal
No Reads
droAna3
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGGAAGGC-ATTGTCATGGACCCTATGAC---------TTATAGCGAAAAAC----GATCTCGTCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTCATGGACCCTATGAC---------TTATAGC.....................2711.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTATGAC---------TTATAGCGAAAAAC----GATCC.....2911.001010000
droBip1
GGGGAAATACAATTAAAAAT-T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTTTTCGAA--------------------AAATTTTTTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTAATGTACTCTA---A---------ATATATCTGAGA------------ATAASizeHit CountTotal NormTotal
No Reads
dp5
GTGTACCACAGTTTAA-ATATAT----------------------------------------ATATGTAAAC-----------AGATA----TATAGGCCCTTGATATCAGCAGATG---ACTATGACTGAGCTTAAGGACGGCGTACAAATAGG----------------------------------------------------GTTGGTAGTGTG-----------------------CACTCTTGCTAGGCTCGAGTCTAGCTCGCCGGATGGTCGGGGTTCTTCCTCACCTAATTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATCGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................TGACTGAGCTTAAGGACGGCGTACAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2731.3340000000400
.............................................................................................................................TGACTGAGCTTAAGGACGGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2131.3340000000220
...........................................................................................................................TATGACTGAGCTTAAGGACGGCGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2531.0030000000300
.............................................................................................................................TGACTGAGCTTAAGGACGGCGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2331.0030000000300
......................................................................................................................................................................................................................................................................TCTAGCTCGCCGGATGGTCGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22110.8290900000000
....................................................................................................................TG---ACTATGACTGAGCTTAAGGACGGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.6720000000020
............................................................................................................................ATGACTGAGCTTAAGGACGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.6720000000020
..............................................................................................................................GACTGAGCTTAAGGACGGCGTACAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.6720200000000
......................................................................................................................................................................................................................................................................TCTAGCTCGCCGGATGGTCGGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23110.6470600010000
..............................................................................................................................................GGCGTACAAATAGG----------------------------------------------------GTTGGTAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010100000000
........................................................................................................................................................................................................................TGTG-----------------------CACTCTTGCTAGGCTCGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010100000000
.............................................................................................TATAGGCCCTTGATATCAGCAGATG---AC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.5020000000200
..................................................................................................................................................................................................................TGGTAGTGTG-----------------------CACTCTTGCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010100000000
.......................................................................................................................................TAAGGACGGCGTACAAATAGG----------------------------------------------------GTTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26100.4040400000000
.......................................................................................................................................................................................................................................................................CTAGCTCGCCGGATGGTCGGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22110.3640400000000
............................................................................................................................ATGACTGAGCTTAAGGACGGCGTAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.3310000000100
....................................................................................................................TG---ACTATGACTGAGCTTAAGGACGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.3310000000100
.............................................................................................................................TGACTGAGCTTAAGGACGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000100
...........................................................................................................................TATGACTGAGCTTAAGGACGGCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310000000100
............................................................................................................TCAGCAGATG---ACTATGACTGAGCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.2510100000000
...............................................................................................TAGGCCCTTGATATCAGCAGATG---ACTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.2510100000000
............................................................................................................TCAGCAGATG---ACTATGACTGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.2510100000000
......................................................................................................................................................................................................................................................................TCTAGCTCGCCGGATGGTCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.2530300000000
........................................................................................................................................................................................................................................................................TAGCTCGCCGGATGGTCGGGGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.2221100000000
......................................................................................................................................................................................................................................................................TCTAGCTCGCCGGATGGTCGGGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.2220200000000
.......................................................................................................................................................................................................................................................................CTAGCTCGCCGGATGGTCGGGGTTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.2220200000000
..........................................................................................................TATCAGCAGATG---ACTATGACTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.2010100000000
........................................................................................................................................................................................................................................................................TAGCTCGCCGGATGGTCGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.1820200000000
.......................................................................................................................................................................................................................................................................................TCGGGGTTCTTCCTCACCTAATTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC......2760.1710100000000
......................................................................................................................................................................................................................................................................TCTAGCTCGCCGGATGGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.1720200000000
...................................................................GTAAAC-----------AGATA----TATAGGCCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.1320110000000
....................TAT----------------------------------------ATATGTAAAC-----------AGATA----TATAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.1310100000000
................................................................TATGTAAAC-----------AGATA----TATAGGCCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.1310100000000
.............................................................................................................................................................................................................................................................................CGCCGGATGGTCGGGGTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.1110100000000
............................................................................................................................................................................................................................................................................TCGCCGGATGGTCGGGGTTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.1110100000000
.......................................................................................................................................................................................................................................................................CTAGCTCGCCGGATGGTCGGGGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.1110100000000
............................................................................................................................................................................................................................................................................TCGCCGGATGGTCGGGGTTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.1110100000000
......................................................................................................................................................................................................................................................................TCTAGCTCGCCGGATGGTCGGGGTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.1110100000000
.............................................................................................................................................................................................................................................................................CGCCGGATGGTCGGGGTTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.1110100000000
............................................................................................................................................................................................................................................................................TCGCCGGATGGTCGGGGTTCTTCCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.1110100000000
............................................................................................................................................................................................................................................................................TCGCCGGATGGTCGGGGTTCTTCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.1110100000000
........................................................................................................................................................................................................................TGTG-----------------------CACTCTTGCTAGGCTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.1010100000000
.......................................................................................................................................................................................................................................................................CTAGCTCGCCGGATGGTCGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.0910100000000
......................................................................................................................................................................................................................................................................TCTAGCTCGCCGGATGGTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20120.0810100000000
........................................................................................................................................................................................................................................................................TAGCTCGCCGGATGGTCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.0810000000100
......................................................................................................................................................................................................................................................................TCTAGCTCGCCGGATGGTCAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.0810100000000
.......................................................................................................................................TAAGGACGGCGTACAAATAGG----------------------------------------------------GTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.0810100000000
......................................................................................................................................TTAAGGACGGCGTACAAATAGG----------------------------------------------------GT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.0810100000000
.......................................................................................................................................................................................................................................................................CTAGCTCGCCGGATGGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18120.0810100000000
.......................................................................................................................................TAAGGACGGCGTACAAATAGG----------------------------------------------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.0810000000100
........................................................................................................................................................................................................................................................................TAGCTCGCCGGATGGTCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18120.0810100000000
......................................................................................................................................TTAAGGACGGCGTACAAATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20130.0810000000010
......................................................................................................................................................................................................................................................................TCTAGCTCGCCGGATGGTCGGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23130.0810100000000
........................................................................................................................................................................................................................................................................TAGCTCGCCGGATGGTCGGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21130.0810100000000
droPer2
ATTATTTGCTCT---CA---TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGT-AAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAA-TGTGTAGGAAGGT-ATTGTTATGGATCCCATGAC---------CTACAGTGAGAAGC----GTTCTCGTCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
GCCGAAGTTAACTTCT-T-T-------------------------------------------------GATATTTTTTTA-G---TTA----AAACAATTTTTTTCTTT--CTTTTT--------------AT-----------------------------------------------------TTTTATTTATTTGTTGTGTATTTTTTGTGTTTTTCTTTTTGTTTCTTTTTTCTTTATTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTTGGTATTTTCCTTTTTTTCTTTCTTTTATTTTCTTTTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------G---------------TTTTATTTT----------------------------------------------------------------------------------TCTTTTACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
GTGGGGGTTTTTTTTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAAATCTTATTACTGTGTGATTAATTGCTTATACA-----------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------------------------------TTTTTAGGAGGGT-ATTATAATTGATCCCATGAC---------ATACAGTGATAAAC----GGTCACGTCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGATCCCATGAC---------ATACAGT.....................2413.003000000000000011000000000000000001000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAC---------ATACAGTGATAAAC----GGTCACG...2511.001000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGAGGGT-ATTATAATTGATCCCAT........................................2711.001000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGATCCCATGAC---------ATACA.......................2211.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAC---------ATACAGTGATAAAC----GTG.......2220.501000000000000000000000000000000000000000000000000000000000000100
droMoj3
CTTCAATTTTTTTTCGAATGTCCGTATTTATTTATTTATTT------------------------------------------------ATTTATTTATTTCTT--------------AAAGCTATTG---A---CAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGAGTCAATTTT-----AATTTGCTCGAAGGGTTCAGCGGATCTCGTAGTCGAGCAGTCACGACTAGAGCTTTCTTACTTGTTAT---------------------------------------------------------------------------------------------------------------------------------TAATAGTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGACTAGAGCTTTCTTACTTGT............................................................................................................................................2431.334100021
......................................................................................................TT--------------AAAGCTATTG---A---CAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGAG..........................................................................................................................................................................................................................25201.10220000220
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTT-----AATTTGCTCGAAGGGTTCAGC........................................................................................................................................................................................2511.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT-----AATTTGCTCGAAGGGTTCAGCGGAT....................................................................................................................................................................................2811.001000010
......................................................................................................TT--------------AAAGCTATTG---A---CAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGAGTCA.......................................................................................................................................................................................................................28200.7014000077
.......................................................................................................T--------------AAAGCTATTG---A---CAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGAGTC........................................................................................................................................................................................................................26200.60121000020
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGACTAGAGCTTTCTTACTTGTTAT---------------------------------------------------------------------------------------------------------------------------------........2720.501100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGACTAGAGCTTTCTTACTTGTTA..........................................................................................................................................2620.501100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGACTAGAGCTTTCTTACTTG.............................................................................................................................................2330.331100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGCGGATCTCGTAGTCGAGCAG.....................................................................................................................................................................2630.331100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGCGGATCTCGTAGTCGAGCA......................................................................................................................................................................2530.331000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACTAGAGCTTTCTTACTTG.............................................................................................................................................2260.332200000
.......................................................................................................T--------------AAAGCTATTG---A---CAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGAGT.........................................................................................................................................................................................................................25200.306000060
......................................................................................................TT--------------AAAGCTATTG---A---CAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGAGTT........................................................................................................................................................................................................................27200.153300000
.....................................................................................................CTT--------------AAAGCTATTG---A---CAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGAG..........................................................................................................................................................................................................................26200.153000003
...................................................................................................TTCTT--------------AAAGCTATTG---A---CAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGA...........................................................................................................................................................................................................................27200.102200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGACTAGAGCTTTCTTACTTGTC...........................................................................................................................................25160.061000010
..............................................................................................................................TG---A---CAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGAGTCAATTTT-----AATT.........................................................................................................................................................................................................27200.051000010
...........................................................................................................................TATTG---A---CAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGAGTCA.......................................................................................................................................................................................................................21200.051000010
..........................................................................................................................CTATTG---A---CAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGAGT.........................................................................................................................................................................................................................20200.051100000
..............................................................................................................................TG---A---CAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGAGTCAATTTT-----AAT..........................................................................................................................................................................................................26200.051000010
.......................................................................................................T--------------AAAGCTATTG---A---CAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGAGTCA.......................................................................................................................................................................................................................27200.051000010
......................................................................................................................AAAGCTATTG---A---CAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGAGTCAAT.....................................................................................................................................................................................................................28200.051100000
..........................................................................................................................CTATTG---A---CAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGAGTCA.......................................................................................................................................................................................................................22200.051000010
........................................................................................................................AGCTATTG---A---CAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGAGTCAA......................................................................................................................................................................................................................25200.051000010
droGri2
GAGCTAGAAACTTCAA-GTTTCT------------------------------------------TA-----------AT--A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAG--TTCTC----------------------------------TTAGTTTGTCCCCTTTTCGATGCATAAAATAATAATCATATTTGGCAGTCAAACTATATTATATTTAATAGTCGGGCCGAGGGTATATCGTAGT----------TGATTACAGCCTTTTTACTTGAGTTTTTTCTTT--------------A---------------TTTTATTTT----------------------------------------------------------------------------------CACTTGTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:20 AM