ID:

dsi_30710

 Coordinate:

x:8796326-8796738 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-81.4 -81.4 -81.3

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+

Sense Strand Reads

GATGGCTCGATGGTTTTTCGATGTTTTTCCACCGACCGACGAAATTATGCGTACGCTCCGCTTATTTTTTATTTATTTTTTCGTAATGCGAACCGAACGCTCGCCGCCCATTAGAATGCAATGAAAAGTCGCACAAAGCCGGGAAAAGTGAAGTTATTTACGCGAATTGAAACAGTGCAGTGCGTGCGAGCGAGAGCGATAATTAAGATGAAATTGCAGGCGACGCCGAAATAAAAAACAAAAAAAAAAGCGTTGCAGCAACAACGTGCGTGTGCGAATGTATGTGTGTGCGTGCGTGAATGTGTGTGTGCTGGTACATGTGAAGAGCCAGGCGAGCGAGCGAGAGGGCGATAGGAGGCCGAGGAAGAAAAGAAGAAGAAGCAGCGGTGGAAAAGAGAACGAAGAAAAGTGGGGAAAGACGAAAAAGGCAAAGCGACAAACGCACACGAAATTGAAAATAGTTTTACGAAAATCCGGAGAAAGCCAGCAATCTTATTTTTTTTTCTTCAATTT
*****************************************************************************...((((..(((..((((..(((((((((((((((.......)))).....(((((....(((((...........((((.((((((.......(((.((((..(((((((.((....))................((((..(((((((.......................))))))).))))...))))))).))))..))).......)))))).))))...........)))))...))))).......)))).)))))))....(((........)))........................))))....................((........)).......)))..))))......*********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
..........................................AATTATGCGTACGCTCCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 18 0 1 2.00 2 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCAAAGCGACAAACG....................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................TTTTCGTAATGCGAACCG.................................................................................................................................................................................................................................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................TTTATTTATTTTTTCGTAATGCGAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................GTGCAGTGCGTGCGAGCGAGAGCGATAA....................................................................................................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0
........................................................................................................CGCCCATTAGAATGCAATGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0
............................................................................TTTTTCGTAATGCGAACCGAACGCTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................................................AAGCAGCGGTGGAAAAGAGAA.................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................AACGTGCGTGTGCGAATG......................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................CACCGACCGACGAAATTATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGGCAAATCCGGAGA................................. 18 2 8 0.38 3 0 2 0 0 0 0 1 0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGGAAAATCCGGA................................... 16 1 6 0.17 1 0 0 0 0 0 1 0 0
..................................................................................................................................................................................................................................CGGAATAAAAGACAAAAAAAAA......................................................................................................................................................................................................................................................................... 22 2 8 0.13 1 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................................................................................................................................................................................AGCGGAGGAAAAGAGAACA................................................................................................................ 19 2 9 0.11 1 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................TGACGCCGAAATAAAAAAAAGA............................................................................................................................................................................................................................................................................... 22 3 9 0.11 1 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGGCAAATCCGGAGA................................. 18 3 20 0.10 2 0 0 0 0 0 1 1 0
.............................................................................................CGAACGATCGCTGGCCATTA................................................................................................................................................................................................................................................................................................................................................................................................................ 20 3 11 0.09 1 0 0 0 0 0 0 0 1
.........................................................................................................................................................................................................................................................................................................................GTACCTGTGAAGATGCAGG..................................................................................................................................................................................... 19 3 17 0.06 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................................GCCGAGGAAGAAAACAG........................................................................................................................................... 17 2 20 0.05 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................TGATAAGAAGAAGAAGCAGTG............................................................................................................................... 21 3 20 0.05 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACCGTGGGGAAAGGCGAAA......................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0

Anti-sense strand reads

CTACCGAGCTACCAAAAAGCTACAAAAAGGTGGCTGGCTGCTTTAATACGCATGCGAGGCGAATAAAAAATAAATAAAAAAGCATTACGCTTGGCTTGCGAGCGGCGGGTAATCTTACGTTACTTTTCAGCGTGTTTCGGCCCTTTTCACTTCAATAAATGCGCTTAACTTTGTCACGTCACGCACGCTCGCTCTCGCTATTAATTCTACTTTAACGTCCGCTGCGGCTTTATTTTTTGTTTTTTTTTTCGCAACGTCGTTGTTGCACGCACACGCTTACATACACACACGCACGCACTTACACACACACGACCATGTACACTTCTCGGTCCGCTCGCTCGCTCTCCCGCTATCCTCCGGCTCCTTCTTTTCTTCTTCTTCGTCGCCACCTTTTCTCTTGCTTCTTTTCACCCCTTTCTGCTTTTTCCGTTTCGCTGTTTGCGTGTGCTTTAACTTTTATCAAAATGCTTTTAGGCCTCTTTCGGTCGTTAGAATAAAAAAAAAGAAGTTAAA
***********************************************************************...((((..(((..((((..(((((((((((((((.......)))).....(((((....(((((...........((((.((((((.......(((.((((..(((((((.((....))................((((..(((((((.......................))))))).))))...))))))).))))..))).......)))))).))))...........)))))...))))).......)))).)))))))....(((........)))........................))))....................((........)).......)))..))))......***************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M025
embryo
 O001
Testis
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M053
female body
 SRR553488
RT_0-2 hours eggs
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTGTTTGCGTGTGCTTTAACTTTTA...................................................... 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.............................TTGGCTGGCTGCTTTAATACGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................ATGCGAGGCGAATAAAAAATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................CACGCACGCTCGCTCTCGCT.......................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................GGCTGGCTGCTTTAATACGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTCTCTTGGTCGATAG..................... 19 3 11 0.73 8 0 0 0 8 0 0 0 0 0 0
................................................................................................................................AGCGTGTTTCTGTCCATTTCAC........................................................................................................................................................................................................................................................................................................................................................................... 22 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0
..............................................................................AAACCTTTACGCTTGGCTTAC.............................................................................................................................................................................................................................................................................................................................................................................................................................. 21 3 6 0.33 2 0 0 0 0 2 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................TTCCTTCTTCTTCGTCGCCGCC........................................................................................................................... 22 2 5 0.20 1 0 0 0 0 0 0 1 0 0 0
.......................AAAAAGTTTGCTGGCTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 19 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................CTTGGGCCCGGCGGGTAAT................................................................................................................................................................................................................................................................................................................................................................................................................ 19 3 8 0.13 1 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................................................................................................................................................................TCCGTCAGCTTCTTTTCTTCTT........................................................................................................................................ 22 3 10 0.10 1 0 0 0 0 0 0 0 0 0 1
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCTCTTTTGGTCGATAG..................... 19 3 11 0.09 1 0 0 0 0 0 0 0 0 1 0
...........CCAAAAAGCTAGAAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 18 2 12 0.08 1 0 0 0 1 0 0 0 0 0 0
.........TACCAAGAAGCAACAAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 20 3 14 0.07 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTCTCGGTCGATAGAG................... 19 3 15 0.07 1 0 0 0 0 0 0 0 0 1 0
..........................AAAGTGGCTGGCTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 16 1 15 0.07 1 0 0 0 0 0 0 0 1 0 0
........................AAAAGGTGGCGGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1
....................................................................................................................................................................TTAAATTTGTCACGT.............................................................................................................................................................................................................................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:8796276-8796788 - dsi_30710 GA-TGGCTCGATGGTTTT-TCGATGTTTTTCC--------------ACCGAC-CGACGAAATTATGCGTACGCTCCGCTTA-TTTTTTATTTATT--TTTTCGTAATGCGAACCGAAC---GCTC-GCCGCC--------------------------CATTAGAATGCAATGAAAAGTCGCACAAAGCCGGGAAAAGTG-----AAGTTATTTACGCGAATTGAAACAG--------T-GCA-------GTGCGTGCGAGCGAGAGCGATAATTA--AGATGAAATTGCAGGCGACGCCG-----------------A--------------AATA-AAAAACAAAAAAAA-AAGCGTTGCA------GCAACAACGTGCGTGTGCG----AATGTATGTGTGTGCGTGCGTGAATGT---------------------------------------------------------------------------------------------GTGTGTG-----------CTGGTACATGTGAAGAGCCAG--------GCGAGCGAGCGAGAGGGCGATAGGAGGCCGAGGAAGAAAAGAAGAA--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGCAGCGGTGGAAAAGAGAACGAAG-AAAAGTGGGGAAAGACGAAAAAGGC------------------------AAAG-----------------------------------CG----------------ACAAACGCACACGAA-ATTGAAAATAGTTTTACGAAA---ATCCGGAGAAAG---------------------CCAGCAATCTT---------ATTT-----TTTT-----TTCTTCAATTT---
droSec2 scaffold_15:19315-19825 - GA-TGGCTCGATGGTTTT-TCGATGTTTTTCC--------------ACCGAC-CGACGAAATTATGCGTACGCTCCGCTTA-TTTTTTATTTATT--TTTTCGTAATGCGATCCGAAC---GCTC-GCCGCC--------------------------CATTAGAATGCAATGAAAAGTCGCACAAAGCCGGGAAAAGTG-----AAGTTATTTACGCGAATTGAAACAG--------T-GCA-------GTGCGTGCGAGCGAGAGCGATAATTA--AGATGAAATTGCAGACGACGCCG-----------------A--------------AATA-AAAAACAA--A-AAAAAGCGTTGCA------GCAACAACGTGCGTGTGCG----AATGTATGTGTGTGCGTGCGTGATTGT---------------------------------------------------------------------------------------------GTGTGTG-----------CTGGTACATGTGAAGAGCCAG--------GCGAGCGAGCGAGAGGGCGATAGGAGGCCGATGAAGAAAAGAAGAA--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGCAGCGGTGGAAAAGAGAACGAAG-AAAAGTGGGGAAAGACGAAAAAGGC------------------------AAAG-----------------------------------CG----------------ACAAACGCACACGAA-ATTGAAAATAGTTTTACGAAA---ATCCGGATAAAG---------------------CCAGCAATCTT---------ATTT-----TTTT-----TTCTTCAATTT---
dm3 chrX:9249786-9250294 - GA-TGGCTCGATGGTTTT-TCGATGTTTTTCC--------------ACCGAC-CGACGAAATTATGCGTACGCTCCGCTTA-TTTTTTATTTATT--TTTTCGTAATGCGAACCGAAC---GTTC-GCCGCC--------------------------CATTAGAATGGAATGAAAAGTCGCACAAAGCCGGGAAAAGTG-----AAGTTATTTACGCGAATTGAAAC----------TCGCA-------GTGCGTGCGAGCGAGAGCGATAATTA--AGATGAAAATGCAGGCGACGCCG-----------------A--------------AATA-AAAAACAA--A-AA-AAACGTTGCA------GCAACAACGTGCGTGTGCG----AATGTATGTGTGTGCGTGCGTGAATGT-----------------------------------G--------------------------------------------------------TGTGTCTG-----------CTGGTATATGTGAAGAGCCAG--------GCGAACGAGCAAGAGGGTGATAGGAGGACGAGGAAGAGAAGAAGAA--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGCAGCGGTGGAAAAGAGAACGAAG-AAAAGTGGGGAAAGACGAAAAAGGC------------------------AAAA-----------------------------------CG----------------ACAAACGCACACGAA-ATTGAAAATAGTTGTACGAAA---ATCAGGAGAAAG---------------------CCAGCGATCTT---------ATT--TTT----------TTCTTAAATTT---
droEre2 scaffold_4690:5870056-5870557 + GA-TGGCTCGATGCTTTT-TCGATGTTTTTCC--------------ACCGAC-CGACGAAATTATGCGTACGCTCCGCTTATTTTTTTATTTATT--TTTTCGTAATCCGAACCGAAC---GCTC-GCCGCC--------------------------CATTAGAATGGAATGAAAAGTCGCACAAAGCCGGAAAAAGTG-----AAGTTATTTTCGCGAATTAATAC----------TCGCA-------GTGCGTGCGAGCGAGAGCGATAATTA--AGATGAAATTACAGGCGACGCCG-----------------A--------------AATA-AAAAACAA--A-AA-AAACGTTGCA------GCAACAACGTGCGTGTGCG----AATGTATGTGTGTGCGTGCA--AGTGT-----------------------------------G--------------------------------------------------------TGTG-GTG-----------TTGGTATATATGAAGAGCTAG--------GAGAGCGAGTGAGAGGGCGATAGGAGGCCGAGGAA---AAGAAGAA--------------------------------------------------------------------------------------------------------------------------------------------------A---AGGCAGCGGTGCAAAAGAGAACGAAG-AAAAGTGGGGAAAGACGAAAAAGGC------------------------AAAA-----------------------------------CG----------------ACAAACGCACACGAA-ATTGAAAATTGTTGTACGAAA---ATCAGGAGAAAG---------------------CCCACGATCTT-------------TTTT----------TTCTTGAATTT---
droYak3 X:17842398-17842897 - GA-TGGCTCGATGTTTTT-TCGATGTTTTTCC--------------ACCGAC-CGACGAAATTATGCGTACGCTCCGCTTATTTTTTTATTTATT--TTTTCGTAATCCGAACCGAAC---GCTC-GCCGCC--------------------------CATTAGAATGGAATGAAAAATCGCACAAAGCCGGGAAAAGTG-----AAGTTATTTTCGCGAATTAATAC----------TCGCA-------GTGCGTGCGAGCGAGAGCGATAATTA--AGATGAAATTGCAGGCGACGCCG-----------------A--------------AATA-AAAAACAAAAA-AA-AAACGTTGCA------GCAACAACGTGCGTGTGCG----AATGTATGTGTGTGCGTGCA--A-------------------------------------------------------------------------------------------------GTGTGTG-----------TTGGTATATGTGAAGAGCAAG--------GAGGGCGAGTGAGAGGGTGATAGGAGACCGAGGAAGA---GAAGAA--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGCAGCGGTGGAAAAGAGAACGAAAAAAAAGTGGGGAAAGACGAAAAAGGC------------------------AAAA-----------------------------------CG----------------ACAAACGCACACGAT-ATTGAAAAT---TGTACGGAA---ATCAGGAGAAAG---------------------CCAACGATCTT---------CTT-TTTT----------TTCTTGAATTT---
droEug1 scf7180000409032:704165-704596 + ------------------------------------------------CGAC-CGACGAAATTATGCGTACGCTCCGCTT--TTTTTTATTTATT--TTTTCGTAATC-----CAAAC---GCCCTGCCGCC--------------------------TATTGAAATAAAATGAAAAATCGCACAAAGCCGG-AAAAGAA-----TAGTTAA------------TTAT----------TTGT-GTATATTGTGCGTGCAAACGAAAGCGAAAATTA--AAATGAAATTACAGGCGACGCCG-----------------A--------------AATA-AAAAACAA--A-AA-AAACGTTGCA------GCAACAACGTGCGTGCG------AGTGTTAGTG-------------------------------------------------------------------------------------------------------------TGTGTGTG-----------TTGGTATATGTAAAGAGCAAA--------GAGAGCGAGTGAGAGGCAGATAGAAGGCA--------AAAGAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGCAGCACCAGAAAAGAGAACTAAG-AAAGGTGGGGGAAAACGAAAAAGGC------------------------AAA------------------------------------CG----------------AAAAACGCATACGAA-AATGAAAATTGTTGTATGAAA---AACCAGGGAAAG---------------------TCAACGATCTT-------------TTTT-T------TTT-----AATTT---
droBia1 scf7180000301760:5225495-5225987 - GC-AGCATCGATGTTCCCATCGACGATCTCCCACCTCTAGTCTGCGACCGACCCGACAAAATTATGCGTACGCTCCGCTTT-TTTTTTATTTATT--TTTTCGTAATC-----CGAAC---GCCCTGCCGCC--------------------------CATGGAAATGAAATGAAAAATCGCACAAGACCGG-AAAAGTGC--C-AAGTTAA------------ATGT----------TCGCAGTGTGCTGTGCGTGCGAGTGGTGGCGATAATTAAAAAATGAAATCTCAGGCGACGCCG-----------------A--------------AATA-AA-AACAA----AA-AAACGTTGCA------GCAACAACGTGCGTGCG----------------------------------------------------TGTGT-GCG--ACTGTG--------------------------------------------------------TGTGTGTG-----------TTGGTATATGTGAAGAGCCAG--------GCGAGCGAGTGAGAGGGCAATAGGAGGCAGAAGA--------AGAG--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGAAGCGGCGGAAAAGAGAACGAAG-AAAGGTGGGGAAAAGCGAAAAAGGC------------------------GAA------------------------------------CG----------------A-AAACGCACTCGAA-AATGAAAACTGCTGTATGAAA---AGCCAGGGAAAG---------------------CCAACGATCTATTAGGC--------CCC----------ATCTT-ACTCT---
droTak1 scf7180000414672:152826-153197 + -------------------------------------------------------ACGAAATTATGCGTACGCTCCGCTT--TTTTTTATTTATT--TTTTCGTAATC-----CGAAC---GCCC-GCCGCC--------------------------CTGTGGGCCGAGA-GGAAAATCGCACAAGACCGG-AAAAGTGC--C-CAGTTAA------------ATGT----------TCGCAGTGCGC--------CGTGCGGGAAAGAAAATTA--ACATGGAATTGCAGGCGACGCCG-----------------A--------------AATA-AA-AACAA-----A-AAACGTTTCA------GCAACAACGTGCGTGCG------AGTGTGTGTGCCTG-----------------------------------------------------------------------------------------------------------TGTGTGGTGTGTGTGTGC-----------------------------------------------------GGCA-----------GAAGAA--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGCAGC---GGAAAAGAGAACGAAG-AAAGGTGGGGAAACACGAAAAAGGC------------------------GAA------------------------------------TG----------------AAA-------------AATGAAAATTGTTGTATGAAA---AACCAGGGAAAG---------------------TCAACGATCTT-------------TTTT-TGCTAGATTT-----TATTT---
droEle1 scf7180000491013:10192-10658 - TAGCGGC-CACTGCTA---TCGAAAT----CG-------------AACCGAC-CGACGAAATTATGCGTACGCTCCGCTT---TTTTTATTTATT--TTTTCGTAATC-----CACAC---GCCCTGCCGCC--------------------------CAT-AAAAT--AATGAAAAATCGCACAAAACCGG-AAAAGTGC--C-TAGTTAA------------ATGT----------TCGCCGATTGCTGTGTGTGCGAACGAGAGCAAGTAATA--AAACGAAATTGCAGGCGACGCCG-----------------A--------------AATA-AAAAACAA--A-AA-AAACGTTGCA------GCAACAACGTGCGTGCG----------------------------------------------------TGAGTCGAGTGAGTGTG--------------------------------------------------------TGTGTTTG-----------TTGGTATATGTGAAGAGCAAA--------GAGAGCGAGTGAGAGGGCGATAGAAGGCA--------------GAA--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGCAGCAGCGGAAAAGAGAACGAAG-AAAGGTGGGGAAAACCGAAAAAGGC------------------------GAA------------------------------------CA----------------AAAAACGCACACGAA-AATGAAAATTGTTGTATGAAAAAAAACAGGGGAAAG---------------------TCAACGATCTAT---GT---ATTA-----TATT-----TTC----GTTG---
droRho1 scf7180000780067:151075-151521 - TG-----------------------CTATCGT--------------ACCGACCCGACGAAATTATGCGTACGCTCCGCTTT-TTTTTTATTTATT--TTTTCGTAATC-----CAAAC---GCCCTGCCGCC--------------------------CAT-AAAAT--AATGAAAAATCGCACAAACCCGG-AAAAGTGC--C-AAGTTAA------------ATGT----------TCGCTGTGTATTGTGAGTGCGAACGAAAGCGAGAATTA--AAATGAAATTGCAGGCGACGCCG-----------------A--------------AATA-AAAAACAA--A-AAAAAACGTTGCA------GCAACAACGTGCGTGCG----------------------------------------------------TGTGTCGAG------TG--------------------------------------------------------TGTGTGTG-----------TTGGTATATGCTAAGAGCAAA--------GAGAGCGAGTGAGAGGGCGATAGAAGGCA--------------GAA--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGCATCAGCGGAAAAGAGAACGAAG-AAAGGTGGGGAAAAACGAAAAAGGC------------------------GAA------------------------------------CG----------------AAAAACGCACACGAA-AATGAAAATTGTTGTATGAAA-AAAACAGGGGAAAG---------------------TCAACGATCTAG---GTATTACT-------------TTT------ATTG--C
droFic1 scf7180000454073:2167118-2167550 - T--------------------------CTGCT--------------ACCGACCCGACGAAATTATGCGTACGCTCCGCTT--TTTTTTATTTATT--TTTTCGTAATC-----CGAAC---GCCCTGCCGCC--------------------------GATTAAAAT--AATGAAAAATCGCACAAAACCGG-AAAAGTGC--C-AAGTTAT------------ATGT----------CCACAGTGTGCCGTGTGTGCGAGTGAGAGTGAGAATAA-AAAATGAAATTGCAGGCGACGCCG-----------------A--------------AATA-AAAAACAA--A-AA-AAACGTTGCA------GCAACAACGTGCGTGCG----------------------------------------------------TGTGT-GTG----TGAG--------------------------------------------------------TGTGTGTG-----------TTGGTATATGTGAAAAGCAAA--------GAGAGCGAGTGAGAGGGCGATAGAAGGCAGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGAAGCAGC---GGAAAAGAGAACGAAG-AAAGGTGGGGAAAAACGAAAAAGCC------------------------TAA------------------------------------CG----------------AAAAACGCACATGAA-AATGAAAAT---TGTATGAAA---AACAGGGGAATG---------------------TTAACGATCTT-------------TTTT-T-----------------TTGGG
droKik1 scf7180000302544:44298-44699 - ----------------------------------------------------------AAATTATGCGTACGCTCGCGTT--TTTTTTATATATTTTTTTTCGTAATC-----CGCCCAACG-------GCGGAATTCAAAATCACGCGAAATATTGT--------T--G--AGAGTGTG-T-----------GTCTGTGTGTGTTATTAAA------------ATCG--TTAACTATTCGCA-------A-GGAAGCGAGCAAGAGGGGAAA--A--GTGTAAAATTGCAGGCGACGCCG-----------------C------ACAAAAAAGATACAAAAACAA--A-AA-AAAAGTTGCA------GCAACAACGTGCGAGTGCG----TGTG-------------------------------------------------------------------------------------------------------------------------TA-----------TTGGTGTAC-----AAGCC-----------------------------------------------------------------------------------------------------------------------------------------------------------GTTATAGGAGCGACTGAGAGAGAAACATTGTAGAAGAACAAGCAGACGAA--GGAAGCGACGAAAGAGAGGCC---G-CAAGGTGGGGAAAG-CGAAAAACGA------------------------AAAC-----------------------------------CG-------------CTGGAAAACGCACACGAA-A-----AC---TTGTGTGAAA---T-GTAGGGAAAG---------------------TCAAC-----------------------------------------------
dp5 2:5949546-5949850 - TG-T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGT----GTGTGTG----TGTGTG-----------------------------------------------------------------------------------------------------------TGTGTGCG-----------TGTGTTTATGTGGACGCC--A--------TTTGGCTGACACGTGGCCGACATGGAGCCCAGGAAGA---GAAGCAAGCACGCTTTCCCTGCACAGAATGCAGTGGCGAAAACAAATCTGACCAAAAAGGAGAGCCAGCAGAGCA-----------------------------------------------------------------------------A---AAGCCATGGCAAAAAGGAGAAGCGAG-TGAAGTGGACTGGAGTGGAAATGCC------------------------AAAGCAAGGCAACAAACAAACAACAACAGAATAAGCGCACG----------------AAC-------------AACGAAAT----------------------------TCGCACAGATCCAGAGGCAGAACAAACCGG------------------TT-------TGC-----CACTC---
droPer2 scaffold_19:1685369-1685677 - TG-TGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTGCGC----GTGTGTG----TGTGTGTGTGTGCG----------------------------------------------------------------------------------------------------------------------TGTGTTTGTGTGGACGCC--A--------TTTGGCTGACACGTGGCCGACATGGAGCCCAGGAAGA---GAAGCAAGCGCGCTTTCCCTGCACAGAATGCAGTGGCGAAAACAAATCTGACCAAAAAGGAGAGCCAGCAGAGCA-----------------------------------------------------------------------------A---AAGCCATGGCAAAAAGGAGACGCGAG-TGGAGTGGAGTGGAGTGGAAATGCC------------------------AAAGCAAGGCAACAAACAAACAACAACAGAATAAGCGAACG----------------AAC-------------AACGAAAT----------------------------TCGCACAGATCCAGAGGCAGAACAAACCGG------------------TT-------TGC-----CACTC---
droWil2 scf2_1100000004909:2815909-2816310 + T----------------------------------------------------------------------------------TTTTTATTTGTTT-TTTTCGTAATC-----TATAC---AACCCAAAATA-------------TGCAT--AAT-----------T--GTTGTAATGTAGTGCAAAT--G--GAAAGTGTATTTTATTGAA------------ATGT----------GCGCATTTG---GCGATTGAGAAAAA--------AAGA--AAAAAAAGTT-GAGGCGACGCCGCCGCCGAAAGAATAGCAAAATATAGCA-AAAAAATA-AGAAAGAAAAA-AA-AAACGTTGCAGG--CAGCAACAACGTGCGTGCG----------------------------------------------------TGTGT-ATA--G---AAAACGAAACGGAACGAACGTGGGGAGCAAGAAGCGAAAAAGCAGCGTAAACGGACTG--AAC------------------------------GCGGA--------GAGAGCGTGTGTGCGAGAGAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAAGGAAAAGAG------------------------AAA------------------------------------TA----------------AAGAAGGC--TGGAAAAAT-AAAA---TTGTATGAAA---AA-TAGGGAAAGTCGCACAGACACAAACA------------------------------------------------CACAC---
droVir3 scaffold_13049:6079944-6080155 + TG-C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATCAAAGTCAGCGAAAATTG--TTCCAAAATCT------CCGCAG-----------------C--------------AATA-AAAAAAAA--------AACGCAAGG------CAAGCGAAGTGCGTGAGTG----TGTGTGTGTGTATGTTTGTATGCGCGTGTAAGTGCTTGTGCATGTGTATGGCGAG----------------------------------------------------------------------------------------------------CG-T--------TTGTGTGTGTGTGTGTGCGCAAAGTGTATGCAAAAAAGAAGAAGAC--------------------------------------------------------------------------------------------------------------------------------------------------A---AAACAGAAGAGCATTAAAAAACGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6473:15771298-15771585 + CG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCGTGAGAGAGAAAGAGAGAG--A--AGAGAAGCGGACAAACGGCAAGG-----------------A--------------A-TA---TCGCAA--AAAA-AAAAGTTGCAGCAAAAGCAACAACGTGCGTGCG----------------------------------------------------TGTGT--------------------------------------------------------------------------------------------GTGTGTAGAAAGAAAAGCATTAAAAAGCCAGAATAAGAGGAACCACATTGGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGAAAAAACGAAAC--GAAAGAGC---G-CAAGGTGGGAACTA-AGAACAACGAACGACAGCTAAACGGGTGACAGGCGCGA-----------------------------------CAAGAAAGACAAGAA---AAAC-------------AGGAGTACAAATATACTAA------AAGGGCGAAG---------------------ACAGCA----------------------------------------------
droGri2 scaffold_15110:3153525-3153743 + GT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT---------------------------------------------------------------------------------------------------------------------------GTGTGC----GTGAGTG----TGTGTGTGTGTGCGTGAGTGT----------------------GT-----GTGTGCG--------------------------------------------------------TGCGTGCG-----------TGAGTGTGTGTGGGGACCCTA--------AAGA--------------AACGAGAAAACAAATAAGAAAAAAAAGT------------------------------------------------------GTCGCAGATATGGAATGGGAATTTTGTTGAATGAATGCAAATGTCGC-------------------------------------------------------------------------------AATTGGCAAGAATGAGACTGAC------------------------AAAC-----------------------------------GG----------------AAAA------------------AT----------------------------TTGAGCAGAATTCGAGGAAACGCAGAGAGC-------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GA-TGGCTCGATGGTTTT-TCGATGTTTTTCC--------------ACCGAC-CGACGAAATTATGCGTACGCTCCGCTTA-TTTTTTATTTATT--TTTTCGTAATGCGAACCGAAC---GCTC-GCCGCC--------------------------CATTAGAATGCAATGAAAAGTCGCACAAAGCCGGGAAAAGTG-----AAGTTATTTACGCGAATTGAAACAG--------T-GCA-------GTGCGTGCGAGCGAGAGCGATAATTA--AGATGAAATTGCAGGCGACGCCG-----------------A--------------AATA-AAAAACAAAAAAAA-AAGCGTTGCA------GCAACAACGTGCGTGTGCG----AATGTATGTGTGTGCGTGCGTGAATGT---------------------------------------------------------------------------------------------GTGTGTG-----------CTGGTACATGTGAAGAGCCAG--------GCGAGCGAGCGAGAGGGCGATAGGAGGCCGAGGAAGAAAAGAAGAA--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGCAGCGGTGGAAAAGAGAACGAAG-AAAAGTGGGGAAAGACGAAAAAGGC------------------------AAAG-----------------------------------CG----------------ACAAACGCACACGAA-ATTGAAAATAGTTTTACGAAA---ATCCGGAGAAAG---------------------CCAGCAATCTT---------ATTT-----TTTT-----TTCTTCAATTT---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................AATTATGCGTACGCTCCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00210000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGC------------------------AAAG-----------------------------------CG----------------ACAAACG......................................................................................................................1811.00110000000000000000
.................................................................................................TTTTCGTAATGCGAACCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.....................................................................................TTTATTTATT--TTTTCGTAATGCGAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
.....................................................................................................................................................................................................................................G--------T-GCA-------GTGCGTGCGAGCGAGAGCGATAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
................................................................................................................................CGCC--------------------------CATTAGAATGCAATGAAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000100000000000
..............................................................................................T--TTTTCGTAATGCGAACCGAAC---GCTC-G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGCGGTGGAAAAGAGAA.............................................................................................................................................................................................................................................2111.00100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................AACGTGCGTGTGCG----AATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
...............................C--------------ACCGAC-CGACGAAATTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
droSec2
GA-TGGCTCGATGGTTTT-TCGATGTTTTTCC--------------ACCGAC-CGACGAAATTATGCGTACGCTCCGCTTA-TTTTTTATTTATT--TTTTCGTAATGCGATCCGAAC---GCTC-GCCGCC--------------------------CATTAGAATGCAATGAAAAGTCGCACAAAGCCGGGAAAAGTG-----AAGTTATTTACGCGAATTGAAACAG--------T-GCA-------GTGCGTGCGAGCGAGAGCGATAATTA--AGATGAAATTGCAGACGACGCCG-----------------A--------------AATA-AAAAACAA--A-AAAAAGCGTTGCA------GCAACAACGTGCGTGTGCG----AATGTATGTGTGTGCGTGCGTGATTGT---------------------------------------------------------------------------------------------GTGTGTG-----------CTGGTACATGTGAAGAGCCAG--------GCGAGCGAGCGAGAGGGCGATAGGAGGCCGATGAAGAAAAGAAGAA--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGCAGCGGTGGAAAAGAGAACGAAG-AAAAGTGGGGAAAGACGAAAAAGGC------------------------AAAG-----------------------------------CG----------------ACAAACGCACACGAA-ATTGAAAATAGTTTTACGAAA---ATCCGGATAAAG---------------------CCAGCAATCTT---------ATTT-----TTTT-----TTCTTCAATTT---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................GTTTTTCC--------------ACCGAC-CGACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
............................................................................................................................................................................................................................ATTGAAACAG--------T-GCA-------GTGCGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
..............................................ACCGAC-CGACGAAATTATGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCCGATGAAGAAAAGAAGAA--------------------------------------------------------------------------------------------------------------------------------------------------G---AA................................................................................................................................................................................................................................................................2611.0011000
..............................................................................................................................................................................AAAGTCGCACAAAGCCGGGAAAAGTG-----AA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
...............................C--------------ACCGAC-CGACGAAATTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
...............................................CCGAC-CGACGAAATTATGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
............................TTCC--------------ACCGAC-CGACGAAATTATGCGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAAGAGCCAG--------GCGAGCGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
..............................................ACCGAC-CGACGAAATTATGCGTACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001
dm3
GA-TGGCTCGATGGTTTT-TCGATGTTTTTCC--------------ACCGAC-CGACGAAATTATGCGTACGCTCCGCTTA-TTTTTTATTTATT--TTTTCGTAATGCGAACCGAAC---GTTC-GCCGCC--------------------------CATTAGAATGGAATGAAAAGTCGCACAAAGCCGGGAAAAGTG-----AAGTTATTTACGCGAATTGAAAC----------TCGCA-------GTGCGTGCGAGCGAGAGCGATAATTA--AGATGAAAATGCAGGCGACGCCG-----------------A--------------AATA-AAAAACAA--A-AA-AAACGTTGCA------GCAACAACGTGCGTGTGCG----AATGTATGTGTGTGCGTGCGTGAATGT-----------------------------------G--------------------------------------------------------TGTGTCTG-----------CTGGTATATGTGAAGAGCCAG--------GCGAACGAGCAAGAGGGTGATAGGAGGACGAGGAAGAGAAGAAGAA--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGCAGCGGTGGAAAAGAGAACGAAG-AAAAGTGGGGAAAGACGAAAAAGGC------------------------AAAA-----------------------------------CG----------------ACAAACGCACACGAA-ATTGAAAATAGTTGTACGAAA---ATCAGGAGAAAG---------------------CCAGCGATCTT---------ATT--TTT----------TTCTTAAATTT---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................AC-CGACGAAATTATGCGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000101000000101000000000000010100000000000000000000000010002000000000000000000
...............................C--------------ACCGAC-CGACGAAATTATGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000020000000001000000000000000000000
...............................C--------------ACCGAC-CGACGAAATTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000001000000000000000000000000000000001100
..............................................ACCGAC-CGACGAAATTATGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000100000000000001000
.........................................................GAAATTATGCGTACGCTCCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020001000000000000
.................................................GAC-CGACGAAATTATGCGTACGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGAAA---ATCAGGAGAAAG---------------------C...................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................C--------------ACCGAC-CGACGAAATTATGCGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCGTGCGTGAATGT-----------------------------------G--------------------------------------------------------TG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGAGGGTGATAGGAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020
...............................C--------------ACCGAC-CGACGAAATTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................GGAATGAAAAGTCGCACAAAGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TGCG----AATGTATGTGTGTGCGTGCGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
...............................C--------------ACCGAC-CGACGAAATTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................AC----------TCGCA-------GTGCGTGCGAGCGAGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................GTGCGTGTGCG----AATGTATGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000
..............................................ACCGAC-CGACGAAATTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AATTATGCGTACGCTCCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000001000000000000000000000000000000000000000
..........................TTTTCC--------------ACCGAC-CGACGAAATTATGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CCGAC-CGACGAAATTATGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................ATTAGAATGGAATGAAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.....................GATGTTTTTCC--------------ACCGAC-CGACGAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTTGTACGAAA---ATCAGGAGAAA..........................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................AACGTGCGTGTGCG----AATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000
..............................................ACCGAC-CGACGAAATTATGCGTACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-AAAAGTGGGGAAAGAC.......................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAGGAGGACGAGGAAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GATGTTTTTCC--------------ACCGAC-CGACGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGCGTGCGTGAATGT-----------------------------------G--------------------------------------------------------TG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
GA-TGGCTCGATGGTTTT-T.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................GTAATGCGAACCGAAC---GTTC-G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GAC-CGACGAAATTATGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGAGGGTGATAGGAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GATGTTTTTCC--------------ACCGAC-CGACGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGAAGAA--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGCAGCG..........................................................................................................................................................................................................................................................1931.6750000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGAGGGTGATAGGAGGACG........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GTGAATGT-----------------------------------G--------------------------------------------------------TGTGTCTG-----------C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
..............................................ACCGAC-CGACGAAATTATGCGTACGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................................................................................................................GTGCGAGCGAGAGCGATAATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................CGCC--------------------------CATTAGAATGGAATGAAAAGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TGTGCG----AATGTATGTGTGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................TTTTTCC--------------ACCGAC-CGACGAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................A--AGATGAAAATGCAGGCGACGCCG-----------------A--------------A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................CCGAC-CGACGAAATTATGCGTACGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAAAG---------------------CCAGCGATCT..........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................C--------------ACCGAC-CGACGAAATTATGCGTACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAAAGAGAACGAAG-AAAA...................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TTTCGTAATGCGAACCGAAC---GTTC-.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................GGAATGAAAAGTCGCACAAAGCCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGCGTGCGTGAATGT-----------------------------------G--------------------------------------------------------TG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................ACCGAC-CGACGAAATTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droEre2
GA-TGGCTCGATGCTTTT-TCGATGTTTTTCC--------------ACCGAC-CGACGAAATTATGCGTACGCTCCGCTTATTTTTTTATTTATT--TTTTCGTAATCCGAACCGAAC---GCTC-GCCGCC--------------------------CATTAGAATGGAATGAAAAGTCGCACAAAGCCGGAAAAAGTG-----AAGTTATTTTCGCGAATTAATAC----------TCGCA-------GTGCGTGCGAGCGAGAGCGATAATTA--AGATGAAATTACAGGCGACGCCG-----------------A--------------AATA-AAAAACAA--A-AA-AAACGTTGCA------GCAACAACGTGCGTGTGCG----AATGTATGTGTGTGCGTGCA--AGTGT-----------------------------------G--------------------------------------------------------TGTG-GTG-----------TTGGTATATATGAAGAGCTAG--------GAGAGCGAGTGAGAGGGCGATAGGAGGCCGAGGAA---AAGAAGAA--------------------------------------------------------------------------------------------------------------------------------------------------A---AGGCAGCGGTGCAAAAGAGAACGAAG-AAAAGTGGGGAAAGACGAAAAAGGC------------------------AAAA-----------------------------------CG----------------ACAAACGCACACGAA-ATTGAAAATTGTTGTACGAAA---ATCAGGAGAAAG---------------------CCCACGATCTT-------------TTTT----------TTCTTGAATTT---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................C--------------ACCGAC-CGACGAAATTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
..................................................................................................................................................................................................................ATTTTCGCGAATTAATAC----------TCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..................................................................................................................................................................................................................................................A-------GTGCGTGCGAGCGAGAGCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...............................................................................................................................................................................................................................AATAC----------TCGCA-------GTGCGTGCGAGCGAGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010001000
...............................................................................................................................................................................................................................................................................................................................................................................................GTGCG----AATGTATGTGTGTGCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGAGCTAG--------GAGAGCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
...............................................................................................................................................................................................................................................CGCA-------GTGCGTGCGAGCGAGAGCGATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
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.................................................................................................................................................................................................................................................CA-------GTGCGTGCGAGCGAGAGCGATAATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.............................................................................................................................................................................................................................TTAATAC----------TCGCA-------GTGCGTGCGAGCGAGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000100
droYak3
GA-TGGCTCGATGTTTTT-TCGATGTTTTTCC--------------ACCGAC-CGACGAAATTATGCGTACGCTCCGCTTATTTTTTTATTTATT--TTTTCGTAATCCGAACCGAAC---GCTC-GCCGCC--------------------------CATTAGAATGGAATGAAAAATCGCACAAAGCCGGGAAAAGTG-----AAGTTATTTTCGCGAATTAATAC----------TCGCA-------GTGCGTGCGAGCGAGAGCGATAATTA--AGATGAAATTGCAGGCGACGCCG-----------------A--------------AATA-AAAAACAAAAA-AA-AAACGTTGCA------GCAACAACGTGCGTGTGCG----AATGTATGTGTGTGCGTGCA--A-------------------------------------------------------------------------------------------------GTGTGTG-----------TTGGTATATGTGAAGAGCAAG--------GAGGGCGAGTGAGAGGGTGATAGGAGACCGAGGAAGA---GAAGAA--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGCAGCGGTGGAAAAGAGAACGAAAAAAAAGTGGGGAAAGACGAAAAAGGC------------------------AAAA-----------------------------------CG----------------ACAAACGCACACGAT-ATTGAAAAT---TGTACGGAA---ATCAGGAGAAAG---------------------CCAACGATCTT---------CTT-TTTT----------TTCTTGAATTT---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGTGCA--A-------------------------------------------------------------------------------------------------GTGTGTG-----------TTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................TATGTGTGTGCGTGCA--A-------------------------------------------------------------------------------------------------GTGTGTG-----------TTGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
...............................C--------------ACCGAC-CGACGAAATTATGCGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGGTGGAAAAGAGAACGAAAA.......................................................................................................................................................................................................................................2511.00100000010000
droEug1
------------------------------------------------CGAC-CGACGAAATTATGCGTACGCTCCGCTT--TTTTTTATTTATT--TTTTCGTAATC-----CAAAC---GCCCTGCCGCC--------------------------TATTGAAATAAAATGAAAAATCGCACAAAGCCGG-AAAAGAA-----TAGTTAA------------TTAT----------TTGT-GTATATTGTGCGTGCAAACGAAAGCGAAAATTA--AAATGAAATTACAGGCGACGCCG-----------------A--------------AATA-AAAAACAA--A-AA-AAACGTTGCA------GCAACAACGTGCGTGCG------AGTGTTAGTG-------------------------------------------------------------------------------------------------------------TGTGTGTG-----------TTGGTATATGTAAAGAGCAAA--------GAGAGCGAGTGAGAGGCAGATAGAAGGCA--------AAAGAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGCAGCACCAGAAAAGAGAACTAAG-AAAGGTGGGGGAAAACGAAAAAGGC------------------------AAA------------------------------------CG----------------AAAAACGCATACGAA-AATGAAAATTGTTGTATGAAA---AACCAGGGAAAG---------------------TCAACGATCTT-------------TTTT-T------TTT-----AATTT---SizeHit CountTotal NormTotal
No Reads
droBia1
GC-AGCATCGATGTTCCCATCGACGATCTCCCACCTCTAGTCTGCGACCGACCCGACAAAATTATGCGTACGCTCCGCTTT-TTTTTTATTTATT--TTTTCGTAATC-----CGAAC---GCCCTGCCGCC--------------------------CATGGAAATGAAATGAAAAATCGCACAAGACCGG-AAAAGTGC--C-AAGTTAA------------ATGT----------TCGCAGTGTGCTGTGCGTGCGAGTGGTGGCGATAATTAAAAAATGAAATCTCAGGCGACGCCG-----------------A--------------AATA-AA-AACAA----AA-AAACGTTGCA------GCAACAACGTGCGTGCG----------------------------------------------------TGTGT-GCG--ACTGTG--------------------------------------------------------TGTGTGTG-----------TTGGTATATGTGAAGAGCCAG--------GCGAGCGAGTGAGAGGGCAATAGGAGGCAGAAGA--------AGAG--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGAAGCGGCGGAAAAGAGAACGAAG-AAAGGTGGGGAAAAGCGAAAAAGGC------------------------GAA------------------------------------CG----------------A-AAACGCACTCGAA-AATGAAAACTGCTGTATGAAA---AGCCAGGGAAAG---------------------CCAACGATCTATTAGGC--------CCC----------ATCTT-ACTCT---SizeHit CountTotal NormTotal
No Reads
droTak1
-------------------------------------------------------ACGAAATTATGCGTACGCTCCGCTT--TTTTTTATTTATT--TTTTCGTAATC-----CGAAC---GCCC-GCCGCC--------------------------CTGTGGGCCGAGA-GGAAAATCGCACAAGACCGG-AAAAGTGC--C-CAGTTAA------------ATGT----------TCGCAGTGCGC--------CGTGCGGGAAAGAAAATTA--ACATGGAATTGCAGGCGACGCCG-----------------A--------------AATA-AA-AACAA-----A-AAACGTTTCA------GCAACAACGTGCGTGCG------AGTGTGTGTGCCTG-----------------------------------------------------------------------------------------------------------TGTGTGGTGTGTGTGTGC-----------------------------------------------------GGCA-----------GAAGAA--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGCAGC---GGAAAAGAGAACGAAG-AAAGGTGGGGAAACACGAAAAAGGC------------------------GAA------------------------------------TG----------------AAA-------------AATGAAAATTGTTGTATGAAA---AACCAGGGAAAG---------------------TCAACGATCTT-------------TTTT-TGCTAGATTT-----TATTT---SizeHit CountTotal NormTotal
No Reads
droEle1
TAGCGGC-CACTGCTA---TCGAAAT----CG-------------AACCGAC-CGACGAAATTATGCGTACGCTCCGCTT---TTTTTATTTATT--TTTTCGTAATC-----CACAC---GCCCTGCCGCC--------------------------CAT-AAAAT--AATGAAAAATCGCACAAAACCGG-AAAAGTGC--C-TAGTTAA------------ATGT----------TCGCCGATTGCTGTGTGTGCGAACGAGAGCAAGTAATA--AAACGAAATTGCAGGCGACGCCG-----------------A--------------AATA-AAAAACAA--A-AA-AAACGTTGCA------GCAACAACGTGCGTGCG----------------------------------------------------TGAGTCGAGTGAGTGTG--------------------------------------------------------TGTGTTTG-----------TTGGTATATGTGAAGAGCAAA--------GAGAGCGAGTGAGAGGGCGATAGAAGGCA--------------GAA--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGCAGCAGCGGAAAAGAGAACGAAG-AAAGGTGGGGAAAACCGAAAAAGGC------------------------GAA------------------------------------CA----------------AAAAACGCACACGAA-AATGAAAATTGTTGTATGAAAAAAAACAGGGGAAAG---------------------TCAACGATCTAT---GT---ATTA-----TATT-----TTC----GTTG---SizeHit CountTotal NormTotal
No Reads
droRho1
TG-----------------------CTATCGT--------------ACCGACCCGACGAAATTATGCGTACGCTCCGCTTT-TTTTTTATTTATT--TTTTCGTAATC-----CAAAC---GCCCTGCCGCC--------------------------CAT-AAAAT--AATGAAAAATCGCACAAACCCGG-AAAAGTGC--C-AAGTTAA------------ATGT----------TCGCTGTGTATTGTGAGTGCGAACGAAAGCGAGAATTA--AAATGAAATTGCAGGCGACGCCG-----------------A--------------AATA-AAAAACAA--A-AAAAAACGTTGCA------GCAACAACGTGCGTGCG----------------------------------------------------TGTGTCGAG------TG--------------------------------------------------------TGTGTGTG-----------TTGGTATATGCTAAGAGCAAA--------GAGAGCGAGTGAGAGGGCGATAGAAGGCA--------------GAA--------------------------------------------------------------------------------------------------------------------------------------------------G---AAGCATCAGCGGAAAAGAGAACGAAG-AAAGGTGGGGAAAAACGAAAAAGGC------------------------GAA------------------------------------CG----------------AAAAACGCACACGAA-AATGAAAATTGTTGTATGAAA-AAAACAGGGGAAAG---------------------TCAACGATCTAG---GTATTACT-------------TTT------ATTG--CSizeHit CountTotal NormTotal
No Reads
droFic1
T--------------------------CTGCT--------------ACCGACCCGACGAAATTATGCGTACGCTCCGCTT--TTTTTTATTTATT--TTTTCGTAATC-----CGAAC---GCCCTGCCGCC--------------------------GATTAAAAT--AATGAAAAATCGCACAAAACCGG-AAAAGTGC--C-AAGTTAT------------ATGT----------CCACAGTGTGCCGTGTGTGCGAGTGAGAGTGAGAATAA-AAAATGAAATTGCAGGCGACGCCG-----------------A--------------AATA-AAAAACAA--A-AA-AAACGTTGCA------GCAACAACGTGCGTGCG----------------------------------------------------TGTGT-GTG----TGAG--------------------------------------------------------TGTGTGTG-----------TTGGTATATGTGAAAAGCAAA--------GAGAGCGAGTGAGAGGGCGATAGAAGGCAGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGAAGCAGC---GGAAAAGAGAACGAAG-AAAGGTGGGGAAAAACGAAAAAGCC------------------------TAA------------------------------------CG----------------AAAAACGCACATGAA-AATGAAAAT---TGTATGAAA---AACAGGGGAATG---------------------TTAACGATCTT-------------TTTT-T-----------------TTGGGSizeHit CountTotal NormTotal
No Reads
droKik1
----------------------------------------------------------AAATTATGCGTACGCTCGCGTT--TTTTTTATATATTTTTTTTCGTAATC-----CGCCCAACG-------GCGGAATTCAAAATCACGCGAAATATTGT--------T--G--AGAGTGTG-T-----------GTCTGTGTGTGTTATTAAA------------ATCG--TTAACTATTCGCA-------A-GGAAGCGAGCAAGAGGGGAAA--A--GTGTAAAATTGCAGGCGACGCCG-----------------C------ACAAAAAAGATACAAAAACAA--A-AA-AAAAGTTGCA------GCAACAACGTGCGAGTGCG----TGTG-------------------------------------------------------------------------------------------------------------------------TA-----------TTGGTGTAC-----AAGCC-----------------------------------------------------------------------------------------------------------------------------------------------------------GTTATAGGAGCGACTGAGAGAGAAACATTGTAGAAGAACAAGCAGACGAA--GGAAGCGACGAAAGAGAGGCC---G-CAAGGTGGGGAAAG-CGAAAAACGA------------------------AAAC-----------------------------------CG-------------CTGGAAAACGCACACGAA-A-----AC---TTGTGTGAAA---T-GTAGGGAAAG---------------------TCAAC-----------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
TG-T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGT----GTGTGTG----TGTGTG-----------------------------------------------------------------------------------------------------------TGTGTGCG-----------TGTGTTTATGTGGACGCC--A--------TTTGGCTGACACGTGGCCGACATGGAGCCCAGGAAGA---GAAGCAAGCACGCTTTCCCTGCACAGAATGCAGTGGCGAAAACAAATCTGACCAAAAAGGAGAGCCAGCAGAGCA-----------------------------------------------------------------------------A---AAGCCATGGCAAAAAGGAGAAGCGAG-TGAAGTGGACTGGAGTGGAAATGCC------------------------AAAGCAAGGCAACAAACAAACAACAACAGAATAAGCGCACG----------------AAC-------------AACGAAAT----------------------------TCGCACAGATCCAGAGGCAGAACAAACCGG------------------TT-------TGC-----CACTC---SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TG-TGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTGCGC----GTGTGTG----TGTGTGTGTGTGCG----------------------------------------------------------------------------------------------------------------------TGTGTTTGTGTGGACGCC--A--------TTTGGCTGACACGTGGCCGACATGGAGCCCAGGAAGA---GAAGCAAGCGCGCTTTCCCTGCACAGAATGCAGTGGCGAAAACAAATCTGACCAAAAAGGAGAGCCAGCAGAGCA-----------------------------------------------------------------------------A---AAGCCATGGCAAAAAGGAGACGCGAG-TGGAGTGGAGTGGAGTGGAAATGCC------------------------AAAGCAAGGCAACAAACAAACAACAACAGAATAAGCGAACG----------------AAC-------------AACGAAAT----------------------------TCGCACAGATCCAGAGGCAGAACAAACCGG------------------TT-------TGC-----CACTC---SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGATCCAGAGGCAGAA...................................................1911.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................TG----TGTGTGTGTGTGCG----------------------------------------------------------------------------------------------------------------------TGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
droWil2
T----------------------------------------------------------------------------------TTTTTATTTGTTT-TTTTCGTAATC-----TATAC---AACCCAAAATA-------------TGCAT--AAT-----------T--GTTGTAATGTAGTGCAAAT--G--GAAAGTGTATTTTATTGAA------------ATGT----------GCGCATTTG---GCGATTGAGAAAAA--------AAGA--AAAAAAAGTT-GAGGCGACGCCGCCGCCGAAAGAATAGCAAAATATAGCA-AAAAAATA-AGAAAGAAAAA-AA-AAACGTTGCAGG--CAGCAACAACGTGCGTGCG----------------------------------------------------TGTGT-ATA--G---AAAACGAAACGGAACGAACGTGGGGAGCAAGAAGCGAAAAAGCAGCGTAAACGGACTG--AAC------------------------------GCGGA--------GAGAGCGTGTGTGCGAGAGAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAAGGAAAAGAG------------------------AAA------------------------------------TA----------------AAGAAGGC--TGGAAAAAT-AAAA---TTGTATGAAA---AA-TAGGGAAAGTCGCACAGACACAAACA------------------------------------------------CACAC---SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------TA----------------AAGAAGGC--TGGAAAAAT-AAAA---TTT...............................................................................................2711.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGGC--TGGAAAAAT-AAAA---TTC...............................................................................................2411.00100010
.............................................................................................................................................................................................................TATTGAA------------ATGT----------GCGCATTTG---GCGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAAAAGAG------------------------AAA------------------------------------TA----------------AAGAAGGC--T..................................................................................................................2511.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAAAAGAG------------------------AAA------------------------------------TA----------------AAGAA........................................................................................................................2111.00100100
...........................................................................................................................................................................................................................................................................................................................................................................GG--CAGCAACAACGTGCGTGCG----------------------------------------------------TGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACGTGCGTGCG----------------------------------------------------TGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------TA----------------AAGAAGGC--TGGAAAAAT-AAAA---TTTGT.............................................................................................2911.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------GCGGA--------GAGAGCGTGTGTGCGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................G----------------------------------------------------TGTGT-ATA--G---AAAACGAAACGGAACG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
..............................................................................................................................................................................AATGTAGTGCAAAT--G--GAAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAAGGAAAAGAG------------------------AA....................................................................................................................................................................................1911.00101000
.................................................................................................................................................................................GTAGTGCAAAT--G--GAAAGTGTAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCGTGTGTGCGAGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100
droVir3
TG-C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATCAAAGTCAGCGAAAATTG--TTCCAAAATCT------CCGCAG-----------------C--------------AATA-AAAAAAAA--------AACGCAAGG------CAAGCGAAGTGCGTGAGTG----TGTGTGTGTGTATGTTTGTATGCGCGTGTAAGTGCTTGTGCATGTGTATGGCGAG----------------------------------------------------------------------------------------------------CG-T--------TTGTGTGTGTGTGTGTGCGCAAAGTGTATGCAAAAAAGAAGAAGAC--------------------------------------------------------------------------------------------------------------------------------------------------A---AAACAGAAGAGCATTAAAAAACGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................GTATGCGCGTGTAAGTGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AATTG--TTCCAAAATCT------CCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTAAGTGCTTGTGCATGTGTATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................ATCAAAGTCAGCGAAAATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CGCGTGTAAGTGCTTGTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000010000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTTTGTATGCGCGTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................AAGCGAAGTGCGTGAGTG----TGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTGCATGTGTATGGCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAGTGCTTGTGCATGTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAGTGCTTGTGCATGTGTATGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000100000000000000000000000
.........................................................................................................................................................................................................................................................................................CAAAATCT------CCGCAG-----------------C--------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.001000000000000000000000000000000000000000000000000000000000000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAG----------------------------------------------------------------------------------------------------CG-T--------TTGTGTGTGTGTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000001
...............................................................................................................................................................................................................................................................................................CT------CCGCAG-----------------C--------------AATA-AAAAAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................CGCAAGG------CAAGCGAAGTGCGTGAGTG----.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GCGCGTGTAAGTGCTTGTGCATGTGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAGAAGAGCATTAAAAA..............................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGTGTGTGTGTGTGCGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.331000000010000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTGTGTATGTTTGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.251000000001000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AG----------------------------------------------------------------------------------------------------CG-T--------TTGTGTGTGTGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.202000000002000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................G----TGTGTGTGTGTATGTTTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000001000000000000000000000000000000000
droMoj3
CG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCGTGAGAGAGAAAGAGAGAG--A--AGAGAAGCGGACAAACGGCAAGG-----------------A--------------A-TA---TCGCAA--AAAA-AAAAGTTGCAGCAAAAGCAACAACGTGCGTGCG----------------------------------------------------TGTGT--------------------------------------------------------------------------------------------GTGTGTAGAAAGAAAAGCATTAAAAAGCCAGAATAAGAGGAACCACATTGGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGAAAAAACGAAAC--GAAAGAGC---G-CAAGGTGGGAACTA-AGAACAACGAACGACAGCTAAACGGGTGACAGGCGCGA-----------------------------------CAAGAAAGACAAGAA---AAAC-------------AGGAGTACAAATATACTAA------AAGGGCGAAG---------------------ACAGCA----------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAAAAACGAAAC--GAAAGAGC---G-CA.....................................................................................................................................................................................................................................2611.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAAACGAAAC--GAAAGAGC---G-CAAG...................................................................................................................................................................................................................................2611.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGGCGCGA-----------------------------------CAAGAAAGACAAGA.................................................................................................................................2511.001000001
droGri2
GT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT---------------------------------------------------------------------------------------------------------------------------GTGTGC----GTGAGTG----TGTGTGTGTGTGCGTGAGTGT----------------------GT-----GTGTGCG--------------------------------------------------------TGCGTGCG-----------TGAGTGTGTGTGGGGACCCTA--------AAGA--------------AACGAGAAAACAAATAAGAAAAAAAAGT------------------------------------------------------GTCGCAGATATGGAATGGGAATTTTGTTGAATGAATGCAAATGTCGC-------------------------------------------------------------------------------AATTGGCAAGAATGAGACTGAC------------------------AAAC-----------------------------------GG----------------AAAA------------------AT----------------------------TTGAGCAGAATTCGAGGAAACGCAGAGAGC-------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................TGT----------------------GT-----GTGTGCG--------------------------------------------------------TGCGTGCG-----------T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.13202
................................................................................................................................................................................................................................................................................................................................................................................................................................TGT----------------------GT-----GTGTGCG--------------------------------------------------------TGCGTGCG-----------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20170.06101
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTGT----------------------GT-----GTGTGCG--------------------------------------------------------TGCGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20190.05101
...........................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTGT----------------------GT-----GTGTGCG--------------------------------------------------------TG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101

Generated: 05/18/2015 at 11:20 PM