ID:

dsi_30693

 Coordinate:

3r:11323509-11323709 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.4 -26.2 -25.9

Flybase annnotation

exon [3r_11323710_11323771_+]; CDS [3r_11323710_11323771_+]; CDS [3r_11323403_11323508_+]; exon [3r_11323216_11323508_+]; intron [3r_11323509_11323709_+]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCAAAAGCAAAAGAAATCCGACGTGAAACGACATGACGACGGCGCCGCAGGTAAATATTCCACATGCCCCCCTTCCTCATCCCATCAATCCATCATTCCACTAAAAATTGCACAAAAAAGTGGCATCTATGAAATATCATGTACTGGCGCTTAAAACTGGGAAGGAGTACATAGAAGTTTTGTACACCAATCCCATCTTAAAGTTCGAATAATATAGAGTATTAATACTAAAACTTCCATCTTGCTTTTAGATTTGGAACGTGTGACGGATTACGCCGAGGAAAAAGAGATCTCTGCGGAC
**************************************************...(((((((.....(((.............................(((((................)))))....(((((....)))))....)))((((.((..(((((.((.(((((.........))))).))..)))))..)).))))............)))))))............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 M023
head
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 M024
male body		 O001
Testis
 GSM343915
embryo
............................................................................................................................................................................................................................................................TCTGGAACGTGTGACGGATTACGCC........................ 25 1 1 3.00 3 2 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................................................................................................TCTGGAACGTGTGACGGATTACGCCGA...................... 27 1 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................TCTGGAACGTGTGACGGATTACGC......................... 24 1 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0
..........................AACGACATGACGACGGCGCCGCAGAT......................................................................................................................................................................................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................GACGGATTACGCCGAGGG................... 18 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
..........................AACGACATGACGACGGCGCCGCAGATC........................................................................................................................................................................................................................................................ 27 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................TGACGGATTACGCCGAGGAAAAGGA............. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................CGTGAAACGACATTGCGAC..................................................................................................................................................................................................................................................................... 19 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................TTACGCCGAGGAAAAAGAGATCTC....... 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................................................GATCTGGAACGTGTGACGGATT............................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................GGGAAGGAGTACATAGAA............................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
........................GAAACGACATGACGACGGCGC................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................................ATTACGCCGAGGAAAAAGAGATCTCTGC.... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................TTTGGAACGTGTGACGGATTACGCA........................ 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................TGTGACGGATTACGCCGAGGAAAAGGA............. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................AAACGACATGACGACGGCG................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................TTTGGAACGTGTGACGGATTACGCC........................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................TGACGGATTACGCCGAGGAAAAGGAGA........... 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...TCAGCAAAAGAAATCCGACGTGA................................................................................................................................................................................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................GCAGATCTGGAACGTGTGACGGATTA............................ 26 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................GACATGACGACGGCGCCG.............................................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.............AAATCCGACGTGAAACGACA............................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................................................................TACGCCGAGGAAAAGGAGATCTCTG..... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................GAAAAGGAGATCTCTGCGGAC 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................GAAAAAGAGATCTCTGC.... 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................TACGCCGAGGAAAAGGAGATCTCTGC.... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................AAAACGACGGGACGACGGCGC................................................................................................................................................................................................................................................................ 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................AGGGGTACGTAGAAGTTTT........................................................................................................................ 19 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1
.........................AAACGACGGGACGACGGCGCG............................................................................................................................................................................................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................AGTACCCCGAGGAAAA................ 16 2 20 0.20 4 0 0 1 1 0 0 0 2 0 0 0
............GAACTCGGACGTGAAAC................................................................................................................................................................................................................................................................................ 17 2 10 0.20 2 0 0 0 2 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................AGCGTGTGACGGATT............................. 15 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................TGTGATTTGGGACGTGTGA................................... 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................ACCGTGTGCCGGATTA............................ 16 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AGTTTTCGTTTTCTTTAGGCTGCACTTTGCTGTACTGCTGCCGCGGCGTCCATTTATAAGGTGTACGGGGGGAAGGAGTAGGGTAGTTAGGTAGTAAGGTGATTTTTAACGTGTTTTTTCACCGTAGATACTTTATAGTACATGACCGCGAATTTTGACCCTTCCTCATGTATCTTCAAAACATGTGGTTAGGGTAGAATTTCAAGCTTATTATATCTCATAATTATGATTTTGAAGGTAGAACGAAAATCTAAACCTTGCACACTGCCTAATGCGGCTCCTTTTTCTCTAGAGACGCCTG
**************************************************...(((((((.....(((.............................(((((................)))))....(((((....)))))....)))((((.((..(((((.((.(((((.........))))).))..)))))..)).))))............)))))))............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 M023
head
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 SRR902009
testis
 GSM343915
embryo
 SRR902008
ovaries
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
............CTTTAGGCTGCACTTTGCTGT............................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................GTAGGGTAGTTAGGTAGTAA............................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............TGGGCTGCACTTTGCT.............................................................................................................................................................................................................................................................................. 16 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............TGGGCTGCACTTTGC............................................................................................................................................................................................................................................................................... 15 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................CTAATGCGGCTCCTTTTTCTC............ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................GCCTAATGCGGCTCCTTTTTC.............. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.............CTTGGGCTGCACTTTGCT.............................................................................................................................................................................................................................................................................. 18 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................TGCACTTTGCTGTACTG........................................................................................................................................................................................................................................................................ 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................TGGTTAGGGTAGAATTTCAAGCTTATT......................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
................GGGCTGCACTTTGCT.............................................................................................................................................................................................................................................................................. 15 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................CGGGGGGAAGGAGTAGGGTAGTTAG................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................CATAATTGTGATTTTGATGGTG............................................................. 22 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.............CTTGGGCTGCACTTTGC............................................................................................................................................................................................................................................................................... 17 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0
..............TTGGGCTGCACTTTG................................................................................................................................................................................................................................................................................ 15 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
..............TTGGGCTGCACTTTGCTT............................................................................................................................................................................................................................................................................. 18 2 4 0.50 2 1 0 1 0 0 0 0 0 0 0 0
.................GGCTGCACTTTGCTT............................................................................................................................................................................................................................................................................. 15 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..............TTGGGCTGCACTTTGCTTG............................................................................................................................................................................................................................................................................ 19 3 9 0.22 2 0 1 0 0 0 0 0 0 0 1 0
..............................................................ATACGGGGGGTAGGAGTAGGGG......................................................................................................................................................................................................................... 22 3 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0
............ACTTGGGCTGCACTTTGC............................................................................................................................................................................................................................................................................... 18 3 20 0.15 3 2 0 0 0 0 0 0 0 1 0 0
...........................................................................................TCGTAAGGTGATTTT................................................................................................................................................................................................... 15 1 18 0.11 2 0 2 0 0 0 0 0 0 0 0 0
.............CTTGGGCTGCACTTTGCTT............................................................................................................................................................................................................................................................................. 19 3 18 0.11 2 1 0 0 0 0 0 0 0 0 0 1
...............TGGGCTGCACTTTGCTTG............................................................................................................................................................................................................................................................................ 18 3 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0
.................GGCTGCACTTTGCTTG............................................................................................................................................................................................................................................................................ 16 2 20 0.10 2 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................TCGTAAGGTGATTTTGAA................................................................................................................................................................................................ 18 2 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0
............ACTTGGGCTGCACTTTGCT.............................................................................................................................................................................................................................................................................. 19 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................AAGGTGTAGGCTAGTTAGTT................................................................................................................................................................................................................. 20 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................AGTAAGGTGATTTTG.................................................................................................................................................................................................. 15 1 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0
...............TGGGCTGCACTTTGCTT............................................................................................................................................................................................................................................................................. 17 2 15 0.07 1 0 0 0 0 1 0 0 0 0 0 0
..................................CTGCTGACGCGGCGTCCG......................................................................................................................................................................................................................................................... 18 2 18 0.06 1 0 0 0 1 0 0 0 0 0 0 0
..............TTGGGCTGCACTTTTCT.............................................................................................................................................................................................................................................................................. 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................GGGAAGGTGTAGGCTAG....................................................................................................................................................................................................................... 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:11323459-11323759 + dsi_30693 TCAAAAGCAAAAGAAATCCGACGTGAAACGACATGACGACGGCGCCGCAGGTAA----AT-----ATTCCACATGCCCCCCT-TCCTC---------ATCCCATCAA----TCCATCATTCCAC-TAAAA--ATTGC----A-----C----AAA-AAAG----TGGCATCTAT----GAAATATCATGTAC----------------------TGGCGCTTAAAACT-GGGAA-GGAGTACATAGAAGTTTT---------------------------------------------GTACACCAATCCCATCTTAAAGTTCGAATAAT----AT-------------------------------------------------------------------------------------------------------------AGAGTATTAATACTAAAACTTCCATCTTGCTTTTAGATTTGGAACGTGTGACGGATTACGCCGAGGAAAAAGAGATCTCTGCGGAC
droSec2 scaffold_0:12153382-12153687 + TCAAAAGCAAAAGAAATCCGACGTGAAACGACATGACGACGGCGCCGCAGGTAA----AT-----ATTCCACATGCGCCCCC-CTTCCCC-AAC---A----ATCAA----CCCATCGTTCCACTAAAAA--ATTAC----ACAAAAAAAAAAAA-AAAA----TGGCATCTAT----GAAATATCATGTATTGAAGTG--CACACAAAAT-TTTGGCGCTTAAAAGT-GGGAA-TGAGTA-----------------------------------------------------------ACACCAATCC---------------TAAATAAATTAG-------------------------------------------------------------------------------------------------------------GAGCATTTATACTGAAACTTCCATCTTGCTTTTAGATCTGGAACGTGTGACGGATTACGCCGAGGAAAAGGAGATCTCTGCGGAC
dm3 chr3R:9861355-9861595 - TAAAAAGCAAAAGAAATCCGATGTGAAACGACATGACGACGGCGCCGCAGGTAAATAAAT-----ATTTCACATGCCGCAAC---------------------------------TCATTCCACTGAAAA--ATTGC----A-----A-----AAAA--ATGACTGGCATCTAT----GAAATATCATGTATTG---------------------------------------------------------------------------------------------------------TGCACCAATCC---------------TTAATAAATAT-------------------------------------------------------------------------------------------------------------GGAGTATTAATACTAAAAC-TTCATCTTGCTTTTAGATTTGGAACGTGTGACGGATTATGCCGAGGAAAAGGAGATCTCTGCGGAC
droEre2 scaffold_4770:9402552-9402855 - TCAAAAGCAAAAGAAATCCGACGTGAAACGACATGACGACGGCGCCGCAGGTAA----AT-----ACTCCACATGCCCCCTC-CCTCCCTCTACCTCTTC--CTCTC----TCCATCATTCCACTAAAAA--ATTGC----A-----AATATAAA-AAAG----TGGCATCTAT----GCCATAGCATGAATTGAAGTG--TCCACACATT-TTAGTCGCTTCA-ACT-GGCAA-TAAGTTCAATTTCCTTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGAAGTATAGTAAGAAAACTAA-ACTTTCATCTTGCTTTTAGACCTGGAACGTGTTACGGATTATGCCGAGGAAAAGGAGATATCTGCGGCC
droYak3 3R:16571656-16571969 + TCAAAAGCAAAAGAAATCCGACGTGAAACGACATGACGACGGCGCCGCAGGTAA----AT-----ACTCCACATGCCCCCTC-CCTCCC-------------ATCCA-----CCTTCCTTCCACTACAAA--ATTGC----A-----AAAAAAAA-AAAG----TGGCTTCTAT----GCAATATCATGAATTAAAGTG--TCCGTACATT-TTCGTCGCTTAA-GCT-GGAAA-TAAGTTCATATTCCTTTT-------------------------------------------------AA---------------GTGCCAATAATAAATA--------------------------------------------------------------------------------------------------ATATACCAGAGTGTAGTGATAATACTGA-ACTTTCATTTTGATTTTAGACTTGGAACGTGTTACGGATTATGCCGAGGAAAAGGAGATATCTGCGGCC
droEug1 scf7180000409802:84642-84811 + TCAAAAACAAAAGAAGTCCGATGTGAAACGGCATGATGACGGCGCCGCAGGTAA----AT-----ATTTGACAC--CCCCCT-CCAGC---------A----ACCAACCAACCTA----CCCA-TAAGAA--ATTT-----A-----A-----A---AAA----AATCATTTAT----GGAATATCATGAATTAAGGTG--CCTACACACTATTTGGCGCTCAAAACT-GG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302402:2644368-2644690 - TCAAAAACAAAAGAAATCCGATGTGAAACGGCATGACGACGGCGCCGCAGGTAA----AT-----ATTTGAGTTACCTCCAC-CCTACCCCCC--------------------------------AAAAA--AATGC----A-----A-----AA-AAAT----AGTCATCTATGGGGGAATGGTCATGACTTAAAG-G--CCCACACACT-TTTGGCGCTTAAAACACT-A-----------------------------------------------------------------------TATAGT--------------GAATA-------TCCAGTGGATCTATGGATTTTGAGAACTTTCCCAGCTTGGATTTATT-----------------TGCTGTTATTATAATCTCCAGAAATATAACTTAA---AACT--------------------------C--TATTATCCCCAGATTTGGAACGTGTTACGGATTATGCCGAGGAAAAAGAGATCTCCGCGGCC
droTak1 scf7180000415380:747380-747714 - TCAAACGCAAAAGAAATCCGACGTGAAAAGGCATGACGACGGCGCCGCAGGTAA----AT-----ATTTAACATGACCCCCTTCCCACCCGGAA-------------------------------AAAAAGAATTGC----A-----A-----A---AAT----AGTCATTTATAGGCGAAATGTAATGAATGAA------TCCACACATT-TTTGGCGCTTAAAACATT-A-----------------------------------------------------------------------TTAATCC---------------TAAGT---TTTGCA--CCATCTG-----TTTGGGATCTTTCATTGTTTGGAATAATTTCTCAAAGTAGACTTTCTGTTTTTATTGTAGACTCCAGAAATAATTCTCAT---AATT--------------------------A--TTATATCCGCAGATTTGGAACGTGTTACGGATTATGCCGAGGAAAAAGAGATCTCCGCGGCT
droEle1 scf7180000491047:1302324-1302588 + TCAAAAACAAAAGAAATCCGACGTGAAACGACATGACGACGGCGCCGCAGGTAA----AT-----GTTTAACAAATCCCCCA-CCCACCCCTAA-------------------------------AAAAA--GTTGC----A-----------AA-AAAG----AGTCATCTAGCTACGAAATATGAGGAACTAGAGTG--C-CATTTATT-TTTGGCGGCTTAAACTTTGTAATTTTGTG-----------------------------------------------------------TCATGAGCCA---------------TTTATAAATTTG-------------------------------------------------------------------------------------------------------------TAATAT----------------ATATTGTCGCCAGATTTGGAACGTGTTACGGACTACGCCGAGGAGAAAGAGATTTCCGCGGCC
droRho1 scf7180000779165:43828-43959 - TCAGAAACAGAAGAAATCCGATGTAAAACGGCATGACGACGGCGCCGCAGGTAA----AT-----ATTTAACATACCCCCCA-CCCACCTCTAA-------------------------------AAAAA--ATTGC----A-----------AA-AAAG----AGTCATCTATCAACGAATTATTATGAATTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453912:367761-368085 - TCAAAAACAAAAGAAACCGGACGTCAAACGGCATGATGACGGCGCCGCAGGTAA----AT-----ATTTCAGTCGCCCCCAC-TCTCCCCTTAC-------------------------------AAAAA--AGGGC----A-----------AA-AAAG----AGTCACCTAAT-GTGAATTATAT---------TTGCTTGTACTATAT-TTTGGCGGTCAAAACT-TCTTG-TTCTTTAATATTCCTTTTTGAATGGTTAGAAAGCTAGTTTTTATGATAAGGGCCTAAAGCATTGCTCATAAAACA---------------TC----------------------------------------------------------------------------------------------------------AAAAACAAA---GATTTATTGG-----A-ACTCAAATTATATTTCCAGATTTGGAACGTGTTACGGATTATGCTGAGGAAAAAGAGATCTCCGCGGCC
droKik1 scf7180000302475:1282398-1282615 + CTCCAAACAAAAGAAGTCCGATGCCAAGCGACACGACGATGGAGCCGCAGGTAA----AATGTTCATTCAACAA--CCCC--------------------------------------------CGCAAA--ACCGCTAGCA-----A-----AAAA--ATTATT-------TT----ACGATTTCCTGCATAA-------------------------------------------------------------------------------------------------------------------------------TTAAATAAT----A------------------------------------------------------------------------------TTTTAAGAAATAATACTTT-AAAAATA----------------------------AAATTATTCACAGATTTGGAGCGGGTTACTGATTATGCCGAGGAAAAGGAAATCTCTGCGGCC
droAna3 scaffold_13340:20613318-20613371 + CAACAGTCAAAAGAAGTCTGATGTGAAAAGACACGACGGCGGTGCGGCAGGTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396413:1789521-1789574 - TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCTGGAAAGGGTTACGGACTATGCCGAAGAAAAAGAAATATCCGCTGCC
dp5 2:13535521-13535571 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTGGAACGTGTTACGGACTATGCGGAGGAAAAGGAGATCTCTGCAGCA
droPer2 scaffold_0:6914201-6914251 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTGGAACGTGTTACTGACTATGCGGAGGAAAAGGAGATCTCTGCAGCA
droWil2 scf2_1100000004921:2009049-2009099 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTTGGAGCGTGTGACAGACTACGCGGAGGAGAAGGAAATTTCGGCGGCG
droVir3 scaffold_12822:554974-555024 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACCTGGAACGTGTGACAGACTACGCGGAGGAGAAGGAAATCTCGGCTGCA
droMoj3 scaffold_6540:33226873-33226923 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACCTGGAACGTGTGACAGACTATGCCGAAGAGAAGGAAATCTCAGCCGCG
droGri2 scaffold_15074:3220962-3221012 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTTGGAACGTGTCACCGACTATGCCGAGGAAAAGGAAATCTCTGCCGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCAAAAGCAAAAGAAATCCGACGTGAAACGACATGACGACGGCGCCGCAGGTAA----AT-----ATTCCACATGCCCCCCT-TCCTC---------ATCCCATCAA----TCCATCATTCCAC-TAAAA--ATTGC----A-----C----AAA-AAAG----TGGCATCTAT----GAAATATCATGTAC----------------------TGGCGCTTAAAACT-GGGAA-GGAGTACATAGAAGTTTT---------------------------------------------GTACACCAATCCCATCTTAAAGTTCGAATAAT----AT-------------------------------------------------------------------------------------------------------------AGAGTATTAATACTAAAACTTCCATCTTGCTTTTAGATTTGGAACGTGTGACGGATTACGCCGAGGAAAAAGAGATCTCTGCGGACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGGATTACGCCGAGGG...................1811.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGCCGAGGAAAAAGAGATCTC.......2411.00100100000000000000
.....................................................................................................................................................................................................................................GGGAA-GGAGTACATAGAA...........................................................................................................................................................................................................................................................................................1811.00100001000000000000
........................GAAACGACATGACGACGGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACGCCGAGGAAAAAGAGATCTCTGC....2811.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAACGTGTGACGGATTACGCA........................2511.00100000000100000000
.........................AAACGACATGACGACGGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAACGTGTGACGGATTACGCC........................2511.00100000000001000000
.............................GACATGACGACGGCGCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.............AAATCCGACGTGAAACGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAAGAGATCTCTGC....1711.00100000000001000000
droSec2
TCAAAAGCAAAAGAAATCCGACGTGAAACGACATGACGACGGCGCCGCAGGTAA----AT-----ATTCCACATGCGCCCCC-CTTCCCC-AAC---A----ATCAA----CCCATCGTTCCACTAAAAA--ATTAC----ACAAAAAAAAAAAA-AAAA----TGGCATCTAT----GAAATATCATGTATTGAAGTG--CACACAAAAT-TTTGGCGCTTAAAAGT-GGGAA-TGAGTA-----------------------------------------------------------ACACCAATCC---------------TAAATAAATTAG-------------------------------------------------------------------------------------------------------------GAGCATTTATACTGAAACTTCCATCTTGCTTTTAGATCTGGAACGTGTGACGGATTACGCCGAGGAAAAGGAGATCTCTGCGGACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTACGCCGAGGAAAAG...............1811.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTACGCCGAGGAAAAGGA.............2011.0010010
............................CGACATGACGACGGCGCCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
........................GAAACGACATGACGACGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
dm3
TAAAAAGCAAAAGAAATCCGATGTGAAACGACATGACGACGGCGCCGCAGGTAAATAAAT-----ATTTCACATGCCGCAAC---------------------------------TCATTCCACTGAAAA--ATTGC----A-----A-----AAAA--ATGACTGGCATCTAT----GAAATATCATGTATTG---------------------------------------------------------------------------------------------------------TGCACCAATCC---------------TTAATAAATAT-------------------------------------------------------------------------------------------------------------GGAGTATTAATACTAAAAC-TTCATCTTGCTTTTAGATTTGGAACGTGTGACGGATTATGCCGAGGAAAAGGAGATCTCTGCGGACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAAAAGGAGATCTCTGCG...2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AAAAGAAATCCGATGTGAAACGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TCCGATGTGAAACGACATGACGACGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000002000000000000000000000100000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTTGGAACGTGTGACGGATT.............................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAAGGAGATCTCTGCGGA.2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGCCGAGGAAAAGGAGATCTCT......2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGTGACGGATTATGCCGA......................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGTGTGACGGATTATGCCGAGGAAAA................2914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGTGAAACGACATGACGACGGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAAAAGGAGATCTCT......1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGAGGAAAAGGAGATCTCTGC....2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACGGATTATGCCGAGGA...................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGAACGTGTGACGGATT.............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGTGACGGATTATGCCGAGG....................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........................................................................................................................................................................CTAT----GAAATATCATGTATTG---------------------------------------------------------------------------------------------------------T.......................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGTGACGGATTATGCCGA......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AAGAAATCCGATGTGAAACGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGGAGATCTCTGCGGA.2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACGGATTATGCCGAGGAA..................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGGAGATCTCTGCGGAC2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............GAAATCCGATGTGAAACGACATGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACGTGTGACGGATTATGCC........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGAACGTGTGACGGATT.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTAGATTTGGAACGTGTG....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGCCGAGGAAAAGGAGA...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AATCCGATGTGAAACGACATGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................T-----ATTTCACATGCCGCAAC---------------------------------TCATT...........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAAGGAGATCTCTGCGG..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGGAAAAGGAGATCTCTGCGGAC2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCGAGGAAAAGGAG............1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TCCGATGTGAAACGACATGACGACGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AAACGACATGACGACGGCGCCGCAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTTGGAACGTGTGACGGATTATGC.........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGCCGAGGAAAAGGAGATCTC.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGAAAAGGAGATCTCTGC....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................CGGCGCCGCAGGTAAATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CCGATGTGAAACGACATGACGACGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGTGAAACGACATGACGACGGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GATGTGAAACGACATGACGACGGCGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGACGGATTATGCC........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACGGATTATGCCGAGGAAAAGGA.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GAAACGACATGACGACGGCGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ACATGACGACGGCGCCGCAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGACGGATTATGCCGAGGAAA.................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ACGACATGACGACGGCGCCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AAAGAAATCCGATGTGAAACGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGTGACGGATTATGCCG.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......CAAAAGAAATCCGATGTGAAACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAACGTGTGACGGATTATG..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AATCCGATGTGAAACGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGGAAAAGGAGATCTCTGCGGA.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAAAAGGAGATCTCTGCGGT.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGAAAAGGAGATCTCTGCGGA.2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCCGAGGAAAAGGAGATC.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CCGATGTGAAACGACATGACGACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAACGTGTGACGGATTATGC.........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
TAAAAAGCAAAAGAAATCCGATGTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AGCAAAAGAAATCCGATGTGAAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AAAGAAATCCGATGTGAAACGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGGATTATGCCGAGGAAAAGGA.............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCGAGGAAAAGGAGATCTCTGCGG..2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATTATGCCGAGGAAAAGGA.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTTGGAACGTGTGACG.................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGACGGATTATGCCGAGG....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................TGAAACGACATGACGACGGCGCCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCCGAGGAAAAGGAGATCTCT......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................TGTGAAACGACATGACGACGGCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGAGGAAAAGGAGAT..........1811.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATGACGACGGCGCCGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATGACGACGGCGCCGCAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TCCGATGTGAAACGACATGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATGCCGAGGAAAAG...............1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ATCCGATGTGAAACGACATGACGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGAACGTGTGACGGATTATGC.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AAGAAATCCGATGTGAAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAACGTGTGACGGATTAT...........................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CGATGTGAAACGACATGACGACGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAAAAGGAGATCTCTGCGG..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGTGACGGATTATGCCGAA.....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGTGTGACGGATTATGC.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................GATGTGAAACGACATGACGACGGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..................CGATGTGAAACGACATGAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGAAAAGGAGATCAT.......18100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGACGGATTATGATC.......................19140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TCAAAAGCAAAAGAAATCCGACGTGAAACGACATGACGACGGCGCCGCAGGTAA----AT-----ACTCCACATGCCCCCTC-CCTCCCTCTACCTCTTC--CTCTC----TCCATCATTCCACTAAAAA--ATTGC----A-----AATATAAA-AAAG----TGGCATCTAT----GCCATAGCATGAATTGAAGTG--TCCACACATT-TTAGTCGCTTCA-ACT-GGCAA-TAAGTTCAATTTCCTTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGAAGTATAGTAAGAAAACTAA-ACTTTCATCTTGCTTTTAGACCTGGAACGTGTTACGGATTATGCCGAGGAAAAGGAGATATCTGCGGCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................TGAAACGACATGACGACGGCGCCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000003
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTACGGATTATGCCGAGGAAA.................2411.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCCGAGGAAAAGGAGATATCTGCGGC.2911.0010100000
...................GACGTGAAACGACATGACGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
droYak3
TCAAAAGCAAAAGAAATCCGACGTGAAACGACATGACGACGGCGCCGCAGGTAA----AT-----ACTCCACATGCCCCCTC-CCTCCC-------------ATCCA-----CCTTCCTTCCACTACAAA--ATTGC----A-----AAAAAAAA-AAAG----TGGCTTCTAT----GCAATATCATGAATTAAAGTG--TCCGTACATT-TTCGTCGCTTAA-GCT-GGAAA-TAAGTTCATATTCCTTTT-------------------------------------------------AA---------------GTGCCAATAATAAATA--------------------------------------------------------------------------------------------------ATATACCAGAGTGTAGTGATAATACTGA-ACTTTCATTTTGATTTTAGACTTGGAACGTGTTACGGATTATGCCGAGGAAAAGGAGATATCTGCGGCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTACGGATTATGCCGAGGAAA.................2411.00100000010000
.........AAAGAAATCCGACGTGAAACGACAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCCGAGGAAAAGGAGATATCTGC....2611.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACGTGTTACGGATTATGC.........................2211.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATGCCGAGGAAAAGGA.............1911.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGCCGAGGAAAAGGAGAT..........2111.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACGGATTATGCCGAGGA...................2011.00100010000000
droEug1
TCAAAAACAAAAGAAGTCCGATGTGAAACGGCATGATGACGGCGCCGCAGGTAA----AT-----ATTTGACAC--CCCCCT-CCAGC---------A----ACCAACCAACCTA----CCCA-TAAGAA--ATTT-----A-----A-----A---AAA----AATCATTTAT----GGAATATCATGAATTAAGGTG--CCTACACACTATTTGGCGCTCAAAACT-GG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TCAAAAACAAAAGAAATCCGATGTGAAACGGCATGACGACGGCGCCGCAGGTAA----AT-----ATTTGAGTTACCTCCAC-CCTACCCCCC--------------------------------AAAAA--AATGC----A-----A-----AA-AAAT----AGTCATCTATGGGGGAATGGTCATGACTTAAAG-G--CCCACACACT-TTTGGCGCTTAAAACACT-A-----------------------------------------------------------------------TATAGT--------------GAATA-------TCCAGTGGATCTATGGATTTTGAGAACTTTCCCAGCTTGGATTTATT-----------------TGCTGTTATTATAATCTCCAGAAATATAACTTAA---AACT--------------------------C--TATTATCCCCAGATTTGGAACGTGTTACGGATTATGCCGAGGAAAAAGAGATCTCCGCGGCCSizeHit CountTotal NormTotal
No Reads
droTak1
TCAAACGCAAAAGAAATCCGACGTGAAAAGGCATGACGACGGCGCCGCAGGTAA----AT-----ATTTAACATGACCCCCTTCCCACCCGGAA-------------------------------AAAAAGAATTGC----A-----A-----A---AAT----AGTCATTTATAGGCGAAATGTAATGAATGAA------TCCACACATT-TTTGGCGCTTAAAACATT-A-----------------------------------------------------------------------TTAATCC---------------TAAGT---TTTGCA--CCATCTG-----TTTGGGATCTTTCATTGTTTGGAATAATTTCTCAAAGTAGACTTTCTGTTTTTATTGTAGACTCCAGAAATAATTCTCAT---AATT--------------------------A--TTATATCCGCAGATTTGGAACGTGTTACGGATTATGCCGAGGAAAAAGAGATCTCCGCGGCTSizeHit CountTotal NormTotal
No Reads
droEle1
TCAAAAACAAAAGAAATCCGACGTGAAACGACATGACGACGGCGCCGCAGGTAA----AT-----GTTTAACAAATCCCCCA-CCCACCCCTAA-------------------------------AAAAA--GTTGC----A-----------AA-AAAG----AGTCATCTAGCTACGAAATATGAGGAACTAGAGTG--C-CATTTATT-TTTGGCGGCTTAAACTTTGTAATTTTGTG-----------------------------------------------------------TCATGAGCCA---------------TTTATAAATTTG-------------------------------------------------------------------------------------------------------------TAATAT----------------ATATTGTCGCCAGATTTGGAACGTGTTACGGACTACGCCGAGGAGAAAGAGATTTCCGCGGCCSizeHit CountTotal NormTotal
No Reads
droRho1
TCAGAAACAGAAGAAATCCGATGTAAAACGGCATGACGACGGCGCCGCAGGTAA----AT-----ATTTAACATACCCCCCA-CCCACCTCTAA-------------------------------AAAAA--ATTGC----A-----------AA-AAAG----AGTCATCTATCAACGAATTATTATGAATTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TCAAAAACAAAAGAAACCGGACGTCAAACGGCATGATGACGGCGCCGCAGGTAA----AT-----ATTTCAGTCGCCCCCAC-TCTCCCCTTAC-------------------------------AAAAA--AGGGC----A-----------AA-AAAG----AGTCACCTAAT-GTGAATTATAT---------TTGCTTGTACTATAT-TTTGGCGGTCAAAACT-TCTTG-TTCTTTAATATTCCTTTTTGAATGGTTAGAAAGCTAGTTTTTATGATAAGGGCCTAAAGCATTGCTCATAAAACA---------------TC----------------------------------------------------------------------------------------------------------AAAAACAAA---GATTTATTGG-----A-ACTCAAATTATATTTCCAGATTTGGAACGTGTTACGGATTATGCTGAGGAAAAAGAGATCTCCGCGGCCSizeHit CountTotal NormTotal
No Reads
droKik1
CTCCAAACAAAAGAAGTCCGATGCCAAGCGACACGACGATGGAGCCGCAGGTAA----AATGTTCATTCAACAA--CCCC--------------------------------------------CGCAAA--ACCGCTAGCA-----A-----AAAA--ATTATT-------TT----ACGATTTCCTGCATAA-------------------------------------------------------------------------------------------------------------------------------TTAAATAAT----A------------------------------------------------------------------------------TTTTAAGAAATAATACTTT-AAAAATA----------------------------AAATTATTCACAGATTTGGAGCGGGTTACTGATTATGCCGAGGAAAAGGAAATCTCTGCGGCCSizeHit CountTotal NormTotal
No Reads
droAna3
CAACAGTCAAAAGAAGTCTGATGTGAAAAGACACGACGGCGGTGCGGCAGGTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................CTGATGTGAAAAGACACGACGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
droBip1
TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCTGGAAAGGGTTACGGACTATGCCGAAGAAAAAGAAATATCCGCTGCCSizeHit CountTotal NormTotal
No Reads
dp5
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTGGAACGTGTTACGGACTATGCGGAGGAAAAGGAGATCTCTGCAGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGACTATGCGGAGGAAAAGGAGAA..........2712.0020000000020
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTACGGACTATGCGGAGGAAAAG...............2511.0010000000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGGACTATGCGGAGG....................1811.0010000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACGTGTTACGGACTATGCGGAGG....................2611.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGACTATGCGGAGGAAAAGGA.............2411.0010000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTACGGACTATGCGGA......................1911.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGACTATGCGGAGGAAAA................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGGAGGAAAAGGAGATC.........2011.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAAAAGGAGATCTCTGCAG..2311.0010100000000
droPer2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTGGAACGTGTTACTGACTATGCGGAGGAAAAGGAGATCTCTGCAGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTACTGACTATGCGGAGGA...................2111.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTATGCGGAGGAAAAGA..............2011.001001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGGAGATCTCTGCA...1811.001100000
droWil2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTTGGAGCGTGTGACAGACTACGCGGAGGAGAAGGAAATTTCGGCGGCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTACGCGGAGGAGAAG...............1911.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACAGACTACGCGGAG.....................1811.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGGAGCGTGTGACAGACTACGCG........................2711.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGACTACGCGGAGGA...................1811.00100010
droVir3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACCTGGAACGTGTGACAGACTACGCGGAGGAGAAGGAAATCTCGGCTGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAGACTACGCGGAGGAGA.................2111.001000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAAGGAAATCTCGGCTGC.2111.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACGCGGAGGAGAAGGAAATCTC.......2511.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACAGACTACGCGGAGGA...................2011.001000000000000010000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTGGAACGTGTGACAGA...............................2011.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTACGCGGAGGAGAAGGAA............2211.001000000000000000000000000000000000000010000000000000000000000000
droMoj3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACCTGGAACGTGTGACAGACTATGCCGAAGAGAAGGAAATCTCAGCCGCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAACGTGTGACAGACTATGCC........................2411.001000001
droGri2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTTGGAACGTGTCACCGACTATGCCGAGGAAAAGGAAATCTCTGCCGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 09:37 AM