dsi_3068

five_prime_UTR [2r_7956499_7956516_-]; CDS [2r_7956453_7956498_-]; exon [2r_7956453_7956516_-]; intron [2r_7955948_7956452_-]

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- GGAAATGGCAGATGAACAACCAAATCTTGTGGCCGGACACCCACCTGCATGTAAGTGCACTTGCATTGGTGTGTGTGGGTGCAGCGAGTTTTCGTTTTTTGGCAGCAATTGAATCTTATAAGAACAAATTGCCTTGCTGGCAATCAACAATGCACGCAATCCAATCAATTGCCAGAATATCTGCGCCCTTATCAGTATCTTAACCTGTTTCGGCCAAAGCTGATAAGTAAACAAACAAGCAAACGCATAG ************************************************...(((((....)))))((((((...(((((((((((....)))..((((((((((((((...(((....)))...)))))).((((..(((........)))..))))..........))))))))...))))))))....)).)))).************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553487 NRT_0-2 hours eggs	SRR553486 Makindu_3 day-old ovaries	SRR902008 ovaries	M024 male body	O002 Head	SRR553485 Chicharo_3 day-old ovaries	M023 head	SRR618934 dsim w501 ovaries
.....TGGCAGATGAACAACCAAATCTTG.............................................................................................................................................................................................................................	24	0	1	2.00	2	2	0	0	0	0	0	0	0
.....TGGCAGATGAACAACCAAATCTTGTGG..........................................................................................................................................................................................................................	27	0	1	2.00	2	1	0	0	0	0	1	0	0
.....TGGCAGATGAACAACCAAATCTTGTGGC.........................................................................................................................................................................................................................	28	0	1	1.00	1	0	1	0	0	0	0	0	0
GAAAATGGCAGATGAACAACCAAA..................................................................................................................................................................................................................................	24	1	1	1.00	1	0	0	1	0	0	0	0	0
...................................................................................................................................................................................................................................TAAACAAACAAGCAAACGC....	19	0	1	1.00	1	0	0	0	0	1	0	0	0
...........................................................................................................................................................................................................CGTGTTTCGGTCAAAGTTGAT..........................	21	3	2	1.00	2	2	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TTAACCTGTTTCGGCCAAAGCTGA...........................	24	0	1	1.00	1	1	0	0	0	0	0	0	0
...........................TGTGGCCGGACACCCACCTGCATTGGA....................................................................................................................................................................................................	27	3	1	1.00	1	0	0	1	0	0	0	0	0
..AAATGGCAGATGAACAACC.....................................................................................................................................................................................................................................	19	0	1	1.00	1	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................CTATCTGAACCTGTTGCGGC....................................	20	3	9	0.67	6	0	6	0	0	0	0	0	0
...................................................................................................................................................................................................TATCTGAACCTGTTGCGGCGA..................................	21	3	2	0.50	1	0	1	0	0	0	0	0	0
.....................................................................................................................................................ATGCACGCGATCCAATCA...................................................................................	18	1	2	0.50	1	0	1	0	0	0	0	0	0
..AAATGGCAGAAGAACAAACAA...................................................................................................................................................................................................................................	21	2	5	0.40	2	0	0	0	0	0	0	2	0
......................................................................................................................................................TGCACGCGATCCAATCA...................................................................................	17	1	4	0.25	1	0	1	0	0	0	0	0	0
.....................GAATCTTGTGGCCGGA.....................................................................................................................................................................................................................	16	1	5	0.20	1	0	0	0	0	0	0	0	1
...................................................................................................................................................................................................TATCTGAACCTGTTGCGGCG...................................	20	3	8	0.13	1	0	1	0	0	0	0	0	0
...................................................................................................................................................................................................TATCTGAACCTGTTGC.......................................	16	2	20	0.10	2	0	2	0	0	0	0	0	0

CCTTTACCGTCTACTTGTTGGTTTAGAACACCGGCCTGTGGGTGGACGTACATTCACGTGAACGTAACCACACACACCCACGTCGCTCAAAAGCAAAAAACCGTCGTTAACTTAGAATATTCTTGTTTAACGGAACGACCGTTAGTTGTTACGTGCGTTAGGTTAGTTAACGGTCTTATAGACGCGGGAATAGTCATAGAATTGGACAAAGCCGGTTTCGACTATTCATTTGTTTGTTCGTTTGCGTATC ************************************************...(((((....)))))((((((...(((((((((((....)))..((((((((((((((...(((....)))...)))))).((((..(((........)))..))))..........))))))))...))))))))....)).)))).************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR902009 testis	SRR618934 dsim w501 ovaries	SRR553488 RT_0-2 hours eggs	SRR553487 NRT_0-2 hours eggs	SRR553485 Chicharo_3 day-old ovaries	M024 male body
...............................................................................................................................................CTTTGTTACGTGGGTTAGGTTAGT...................................................................................	24	3	1	3.00	3	3	0	0	0	0	0
.................................................................................................................................................................................ATAGGCCCGGGAATAGTCA......................................................	19	2	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................AATAGTCATAGAATTG..............................................	16	0	2	0.50	1	0	1	0	0	0	0
........................................................................................................................................................................................CGGGAATAGTCAGAGGAT................................................	18	2	2	0.50	1	0	1	0	0	0	0
...........................ACACCGGCTAGTGGGTG..............................................................................................................................................................................................................	17	2	3	0.33	1	0	0	1	0	0	0
..........................................................................................................................................................................................................TGGGCAAAGCCGGTTT................................	16	1	6	0.17	1	0	0	0	0	1	0
....................................................................................................................................................................................TACGCGGGAATAGTC.......................................................	15	1	6	0.17	1	0	0	0	1	0	0
......................................................................................................................................ACGACCGTGAGTTGTT....................................................................................................	16	1	9	0.11	1	0	1	0	0	0	0
.......................................................................................................GCGGTAACTTAGAATCTTC................................................................................................................................	19	3	19	0.05	1	0	0	0	0	0	1
...........................................................................................................................................................AGTTAGGTTAGTTAAC...............................................................................	16	1	20	0.05	1	0	0	0	1	0	0
........................................................CGTGAACGTACCCAC...................................................................................................................................................................................	15	1	20	0.05	1	0	1	0	0	0	0
............................................................................................................................................GTTAATTGTTACGTG...............................................................................................	15	1	20	0.05	1	0	0	0	1	0	0

Species	Coordinate	ID	Alignment
droSim2	2r:7956253-7956502 -	dsi_3068	GGAAATGGCAGATGAACAACCAAATCTTGTGGCCGGACACCCACCTGCATGTAAGTGCACT---------TGCATTGGTG-----------------TGT-----------------GTGG-----GTGCA------------G-CGAG----T-T-TT-CGT-----T--TTT-------TGGCAGCAATTGAATCTTATAAGAA----------------------------------CAAATTGCCTTGCTGGCAATCAACAATGCACGCAATCC-AATCAA-TTGC-CA-GAATATCTGC---GCCCTTATCAGTATCTTAACCTGTTTCGGCCAA---------AGCTGATAAGTAAACAAACAAG--------------------------------------CAAACGCATAG
droSec2	scaffold_1:4802579-4802842 -		GAAAATGGCAGATGAACAACCAAATCTTGTGGCCGGACACCCACCTGCATGTAAGTGCACT---------TGCATTGGTG-----------------TGT-----------------GTGG-----GTGCA------------G-CGAG----T-T-TT-CGT-----T--TTT-------TGGCAGCAATTGAATCTTATAAGAA----------------------------------CAAATTGCCTTGCTGGCAATCAATAATGCACCCAATCC-AATCAA-TTGC-CA-GAATATCTGC---GCCCTTATCAGTATCTTAACCTGTTTCGGCCAA---------AGCTGATAAGTAAACAAACAAGC-GAACACAC------GCA----AG-------------CAAACGCATAG
dm3	chr2R:7246244-7246512 -		ACAAATGGCAGATGAACAACCAAATCTTGTGGCCGGACACCCACCTGCATGTAAGTGCACT---------TGCATTGGTG-----------------TGT-----------------GTGTG-TCGATGCA------------GACGAG----T-T-TT-CGA-----T--TTT-------TGGCAGCAATTGAATCTTATAAGAA----------------------------------CAAACTGCCTTGTTGGCAATCAATAATGCACCCAATCA-AATCAA-TTGC-CA-GAATATCTGC---GCCCTTATCAGTATCTTAACCTGTTTCGGCCAA---------AGCTGATAAGTAAACAAATAAGC-GAACACAG------GCA----AG-------------CAAACGCATAG
droEre2	scaffold_4845:18549167-18549443 +	der_1186	GAAAATGGCAGATGAACAACCAAATCTTGTGGCCGGACACCCACCTGCATGTAAGTGCACT---------TGCATTGGTG-----------------TGT-----------------GTAG-----GTGCA------------TGCGAT----GTT-TT-C-T-----T--CTT-------TGGCAGCAATAGAATCTTATAAAAA----------------------------------CAAAGTGCCTTGCTGGCAATTCATAATGCACTCAATCC-AATCAA-TTGT-CA-GAATATCTGC---GCCCTTATCAGTATCTTAACCTGTTTCGACCAA---------AGCTGATAAGTAAACAAACAAG---AACACACAC--ACGCACA--C-----CTACGCCGACAAAGGCACAG
droYak3	2R:9715082-9715360 +	dya_519	GAAAATGGCGGATGAACAACCAAATCTTGTAGCCGGACACCCACCTGCATGTAAGTGCACT---------TTCATTGGTG-----------------TGT-----------------GTGTGG---GTGCA------------GGCGAG----C-T-TT-TGT-----TTTTTT-------TGGCAGCAATGTAATCTTATAAGAA----------------------------------AAAAGTGCCTTGTTGGCAATTAATAAGGCACCCAATAC-AATCAA-TTGC-CA-GAATATCTAC---GCCCTTATCAGTATCTGAACCTGTTTCTACCAA---------AGCTGATAAGTAAACAAACAAGC-ACACACAC------GCACG--C-----CTACGCCTACAAAGGCACGG
droEug1	scf7180000409462:1262036-1262318 +		GAAAATGGCAGATGAACAACCCAATCTTGTGGCTGGACACCCACCTGCATGTAAGTGCACT---------TCCATGAGTG-----------------TGT-----------------ATGTG-TGTGTGCA------------GGCATC----T-T-TT--GTC----T--TTTCT--TTTTGACATCAACTAAATCCAATAAGAAATCTAC-----------------------------GAATTGCTTTGTTGGCAATTAATAATACGCCCAATCC-TATCAA-TTGC-CA-CAATATCTAC---GGCCTTATCAGTATCTTAACCTGTTTCGGCCAA---------CGCTGATAAGTAAACAAACAACC-ACACACAC------GCACA--C-----------TCACAAAGTCATTG
droBia1	scf7180000301754:1047262-1047534 +		GAAAATGGCAGATGAACAACCCAATCTTGTGGCTGGACACCCACCTGCATGTAAGTGCACT---------TGCATAGGTG-----------------TGC-----------------GTGT-----GTGCA------------GGCTTG----T-T-CTCCGT-----T--TTTCTCATTTCG---ACA----ATTCCAATAAGAAATCTAG-----------------------------GAGCTGCCCCGCTGGCAATTAACAATGCAACCAATCC-TATCAA-TTGC-CC-CAATATCTAC---GCCCTTATCAGTATC-TAACCTGTTTCGGCCAA---------AGCTGATAAGTAAACAAACAACCAGCACACAC------GCACA--CA-------------CAAAGGCATTG
droTak1	scf7180000415138:26201-26455 +		GAAAATGGCAGATGAACAACCCAATCTTGTGGCTGGACACCCACCTGCATGTAAGTGCAAT---------TGCATTGGTG-----------------TGC-----------------GTGT-----GTGCA------------GGC---------T-TT---T-----T--TTT-------TGGGAACA-----GTTCAATAAGAAATCTAC-----------------------------GAATTGCCCCGCTGGCAATTAATAATGCAGCCAATCC-TATCAA-TTGC-CA-GAATATCTAC---G-CCTTATCAGTATCTTAACCTGTTTCG---------------GCTGATAAGTAAACAAACAAGCCGCACACAC------GCACA--CA-------------CAAAGGCATTG
droEle1	scf7180000491214:2689750-2690015 -		AAAAATGGCTGATGAACAACCCAATCTTGTTGCTGGACACCCACCTGCATGTAAGTGCACT---------TGCATTGGTG-----------------TGC-----------------GTGT-----GTGCA------------GTCATG----T-T-TT-TGT-----T--TTT-------CCACAAAA-----ATTCCATAGGAAATCAAC-----------------------------GAATTGCCCCGCTGGCAATTAATAATACTCCCAATCC-TATCAA-TTGC-CA-CAATATCTAC---TCCCTTATCAGTATCTTAACCTGTTTCGGCCAA---------AGCTGATAAGTAAACAAACAACTTGCACATAC------GCA----CA-------------CGAAGCCATTG
droRho1	scf7180000779263:317884-318155 +		GACAATGGCTGATGAACAACCCAATCTTGTTGCTGGACACCCACCTGCATGTAAGTGCACT---------TGCATTAGTG-----------------TGT-----------------GTGT-----GTGCA------------GGCATG----T-T-TT-TGT-----T--TTT-------CGACAATA-----ATTCCATAAGAAATCTAC-----------------------------GTACTGCCCTGCTGGCAATTAATAATGCTCCCAATCC-TATCAA-TTGC-CA-CAATATCTAC---GGCCTTATCAGTATTTTAACCTGTTTCGTCAAA---------TGCTGATAAGTAAACAAACAACCCGCACACACAA----ACACACATG-------------CAAAGACATTG
droFic1	scf7180000453773:180747-181014 -		GAAAATGGCAGATGAACAACCCAATCTTGTGGCTGGACACCCACCTGCATGTAAGTTATCT---------TGCAGTTGTG-----------------TGT-----------------GTCTGT---GTGCT------------GGCATGTTGTGTTTTTACGC-TTTTT--TTT------TTG--TAG-----AATCCAATAAGAAATCTAC-----------------------------G-ATTGCCCCGTTGGCAATTAATAAAGCACCAAATCC-TATCAA-TTGC-CA-CAATATCTACA--AACCTTATCAGTATCTTAACCTGTTTCGGCCAA---------AGCTGATAAGTAAACAAACAACTCGCACACAT------ACACA--C-------------------------
droKik1	scf7180000302476:75644-75946 -		GAAAATGGCAGATGAGCAACCGAATCTTGTGGCTGGCCACCCACCTGCACGTAAGTGCACT------TATTGCATTGGTA-----------------TGC-----------------GTGTGA---GTTCGTGCTCGGG----GGCATG----T-T-TT-TGT-----T--TT--------TGCC--CAAATAAATCCAATTGTAAGGCTGGGAGGTAC---------------------TTATTTGCCTTGCTGGCAATTAATAATGCAGCAATTCG-TATCAA-TGGC-CA-CAATATCTAC---GGCCTTATCAGTATTTTAACCTGTTTCGTCCAA---------AGCTGATAAGTAAACAAACAACCCGGGCTCGCACACACACA----CGC---ATAGGC--GCACATCTATTG
droAna3	scaffold_13266:944226-944522 -		TAAAATGGCTGATGAGCAACCAAATCTGGTGGCCGGACACCCACCTGCACGTAAGTGCAAT---------TGCATTGGTG-----------------TGCAGCACGCG--TGGGTGTGTGT-----GTGCGTATGAAAA----GGAATG----T-T-TT-TGT-----T--TTC-------TG--AACA-----ATTCAATAAGC--------------------------CGGATGA--TAGAATGCCTTGCTGGCAATTAATTATACACCGATTCG-TATCAA-TAGC-CA-CAATATCTAC---TGCCTTATCAGTATTTTAACCTGTTTCGCCCAA---------TGCTGATAAGTAAACAAACTC-----ACACAC------TCTCA--CA-GCCGCACACCAACACAACAGTTG
droBip1	scf7180000396730:1953145-1953408 -		TAAAATGGCTGATGAGCAACCAAATCTGGTGGCCGGACACCCACCTGCACGTAAGTGCAAT---------TGCATCAGTG-----------------TGCGGCGGACG--TGG----GTGT-----GTGCGTTTGAAAA----GGAATG----T-T-TT-TGT-----T--TTT-------C-TCAAT-----AATCCAATAAGC--------------------------CGGATGA--TAGAATGCCTTGCTGGCAATTAACCATATACCGATTCG-TATGAA-TAGC-CC-CAATATCTAC---TGCCTTATCAGTATTTTAACATGTTTCGGCCAA---------AGCTGATAAGTAAACAAACTC-----ACACAC---------------------------------------
dp5	3:14099709-14099971 -		GAAAATGTCTGATGAACAACCCAATCTCGTGGCTGGACACCCACCTGCTTGTAAGTGTAAT---------TGCATAGGTA-----------------TTCTCCATGCGCTTTGATGTATTTGT---GTG--CTTGTGTGTGAATG--------T-G-----------------------------T------------------------AGGAGGTAAAAAGTATTAAAATGGCT-AT-GGAGGTGCTCCGCTGACAATTGATTGTGCACCCAATTCACAACAA-TAGC-CACCAATATCTAT---TGCCTTATCAGTATCTTAGCCTGCTTCGGCAGA---------TGCTGATAAGCAATAAGAAAAC------------------------------------------------G
droPer2	scaffold_4:1218261-1218523 +		GAAAATGTCTGATGAACAACCCAATCTCGTGGCTGGACACCCACCTGCTTGTAAGTGTAAT---------TGCATAGGTA-----------------TTCTCCATGCGCTTTGATGTATTTGT---GTG--CTTGTGTGTGAATG--------T-G-----------------------------T------------------------AGGAGGTAAAAAGTATTAAAATGGCT-AT-GGAGGTGCTCCGCTGGCAATTGATTGTGCACCCAATTCACAACAA-TAGC-CACCAATATCTAT---TGCCTTATCAGTATCTTAGCCTGCTTCGGCAGA---------TGCTGATAAGCAATAAGAAAAC------------------------------------------------G
droWil2	scf2_1100000004512:2250199-2250453 -		A--TATGGCTGATGAACAACCAAATCTTGTGGCGGGCCACCCACCTGCACGTAAGTGCAAGTCCACATGTTTCAAT---G-------------TGTGTGT-----------------GTGTGT---GTGTA------------TGC---------------------------T-------TGGGAGTAATGAACAATTATTTG-----------------------------GTG-CTCCAAAATGCTTTGTTGGCAATTTTAAATGTACTCAATTT-AATTAAATAGTTCATAAATATCTTGAGGTACCTTATCAATATATTCACCTGCTTCACCCAATTTCATAGAGGCTGATAAGTAAACAAAGCA--------------------------------------------------
droVir3	scaffold_12875:5745918-5745978 -		AAACATGGCTGATGAACAACCAAATTTGGTAGCTGGACATCCACCTGCATGTAAGTGCACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3	scaffold_6496:24318489-24318578 +		AAACATGGCGGACGAACAACCGAATCTAGTAGCTGGACACCCACCTGCATGTAAGTGCATT---------TAGAG----ATTCTCTTCCATTGTG--TGT-----------------GTTG-----G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2	scaffold_15112:680860-680914 -		---AATGGCTGATGAACAACCCAATCTGGTGGCTGGACACCCACCTGCATGTAAGTGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

GGAAATGGCAGATGAACAACCAAATCTTGTGGCCGGACACCCACCTGCATGTAAGTGCACT---------TGCATTGGTG-----------------TGT-----------------GTGG-----GTGCA------------G-CGAG----T-T-TT-CGT-----T--TTT-------TGGCAGCAATTGAATCTTATAAGAA----------------------------------CAAATTGCCTTGCTGGCAATCAACAATGCACGCAATCC-AATCAA-TTGC-CA-GAATATCTGC---GCCCTTATCAGTATCTTAACCTGTTTCGGCCAA---------AGCTGATAAGTAAACAAACAAG--------------------------------------CAAACGCATAG	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.....TGGCAGATGAACAACCAAATCTTG.......................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
.....TGGCAGATGAACAACCAAATCTTGTGG....................................................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0
.....TGGCAGATGAACAACCAAATCTTGTGGC...................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TAAACAAACAAG--------------------------------------CAAACGC....	19	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................TTAACCTGTTTCGGCCAA---------AGCTGA.................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..AAATGGCAGATGAACAACC...............................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

GAAAATGGCAGATGAACAACCAAATCTTGTGGCCGGACACCCACCTGCATGTAAGTGCACT---------TGCATTGGTG-----------------TGT-----------------GTGG-----GTGCA------------G-CGAG----T-T-TT-CGT-----T--TTT-------TGGCAGCAATTGAATCTTATAAGAA----------------------------------CAAATTGCCTTGCTGGCAATCAATAATGCACCCAATCC-AATCAA-TTGC-CA-GAATATCTGC---GCCCTTATCAGTATCTTAACCTGTTTCGGCCAA---------AGCTGATAAGTAAACAAACAAGC-GAACACAC------GCA----AG-------------CAAACGCATAG	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.......................................................................................................................................................................................................................................................................................................AATATCTGC---GCCCTTATCAGT.....................................................................................................	21	1	1.00	1	1	0	0	0
...............ACAACCAAATCTTGTGGCCGGA...............................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................AGTAAACAAACAAGC-GAACACAC------G................................	24	1	1.00	1	0	1	0	0
.....................................................AGTGCACT---------TGCATTGGTG-----------------TGT-----------------...............................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0
...AATGGCAGATGAACAACC...............................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
.........................................................................ATTGGTG-----------------TGT-----------------GTGG-----GTGCA------------G-C..................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1
.....TGGCAGATGAACAACCAAAT...........................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0
.............GAACAACCAAATCTTGTGGCC..................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0

dm3

ACAAATGGCAGATGAACAACCAAATCTTGTGGCCGGACACCCACCTGCATGTAAGTGCACT---------TGCATTGGTG-----------------TGT-----------------GTGTG-TCGATGCA------------GACGAG----T-T-TT-CGA-----T--TTT-------TGGCAGCAATTGAATCTTATAAGAA----------------------------------CAAACTGCCTTGTTGGCAATCAATAATGCACCCAATCA-AATCAA-TTGC-CA-GAATATCTGC---GCCCTTATCAGTATCTTAACCTGTTTCGGCCAA---------AGCTGATAAGTAAACAAATAAGC-GAACACAG------GCA----AG-------------CAAACGCATAG	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.....TGGCAGATGAACAACCAA.............................................................................................................................................................................................................................................................................................................................................................................................................	18	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.CAAATGGCAGATGAACAACCAA.............................................................................................................................................................................................................................................................................................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.CAAATGGCAGATGAACAACC...............................................................................................................................................................................................................................................................................................................................................................................................................	20	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................AACCAAATCTTGTGGCCGGACA.............................................................................................................................................................................................................................................................................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................AACCAAATCTTGTGGCCGGACACCC..........................................................................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................TCTTGTGGCCGGACACCCACCT......................................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
..........................................................................TTGGTG-----------------TGT-----------------GTGTG-TCGATGC..................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........AGATGAACAACCAAATCTTGTGGC...................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ACAAATGGCAGATGAACAACCAAA............................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................CTTGTGGCCGGACACCCACC.......................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................TCTTGTGGCCGGACACCCAC........................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................AACCAAATCTTGTGGCCG.................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................TGTGGCCGGACACCCACCTGCA...................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............AACAACCAAATCTTGTGGCCGGACA.............................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................ACT---------TGCATTGGTG-----------------TGT-----------------GTGTG-.........................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
...................CCAAATCTTGTGGCCGG................................................................................................................................................................................................................................................................................................................................................................................................	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................T--TTT-------TGGCAGCAATTGAATCT..............................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................CAACCAAATCTTGTGGCCG.................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................TGTG-TCGATGCA------------GACGAG----...........................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................ATCTTGTGGCCGGACACCC..........................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................AACCAAATCTTGTGGCCGGACACCCAC........................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
..............AACAACCAAATCTTGTGGCCGGAC..............................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ACCAAATCTTGTGGCCGGA...............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................CAACCAAATCTTGTGGCCGGA...............................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................CT---------TGCATTGGTG-----------------TGT-----------------GTGTG-TC.......................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ACCAAATCTTGTGGCCGGACACCC..........................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................CAAATCTTGTGGCCGGACACC...........................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................GGTG-----------------TGT-----------------GTGTG-TCGATGC..................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................ATCTTGTGGCCGGACACCCACCTG.....................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................GGTG-----------------TGT-----------------GTGTG-TCGATG...................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................CCCACCTGCATGTAAGTG...........................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ACAAATGGCAGATGAACAACCAAAT...........................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................GGCCGGACACCCACCTGCAT..................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................ATTGGTG-----------------TGT-----------------GTGTG-TCGAT....................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................TAACCTGTTTCGGCCAA---------AGCTGA.................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................TCTTGTGGCCGGACACCCACCTGCATT.................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................GGCCGGACACCCACCTGC....................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTAAGTGCACT---------TGCATTGGTG-----------------TGT-----------------GTG............................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................TATCTTAACCTGTTTCGG....................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................TTGTGGCCGGACACCCACCTGC....................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

GAAAATGGCAGATGAACAACCAAATCTTGTGGCCGGACACCCACCTGCATGTAAGTGCACT---------TGCATTGGTG-----------------TGT-----------------GTAG-----GTGCA------------TGCGAT----GTT-TT-C-T-----T--CTT-------TGGCAGCAATAGAATCTTATAAAAA----------------------------------CAAAGTGCCTTGCTGGCAATTCATAATGCACTCAATCC-AATCAA-TTGT-CA-GAATATCTGC---GCCCTTATCAGTATCTTAACCTGTTTCGACCAA---------AGCTGATAAGTAAACAAACAAG---AACACACAC--ACGCACA--C-----CTACGCCGACAAAGGCACAG	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
...........................................................CT---------TGCATTGGTG-----------------TGT-----------------GTA............................................................................................................................................................................................................................................................................................................	18	1	2.00	2	0	0	0	0	0	2	0
..........GATGAACAACCAAATCTTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
.........................................................................ATTGGTG-----------------TGT-----------------GTAG-----GTGCA------------TGCGAT----...........................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1	0
......GGCAGATGAACAACCAAATCTTGTGGCC..................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0
.................AACCAAATCTTGTGGCCGGACACCCA.........................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0
...................CCAAATCTTGTGGCCGGACACCCACC.......................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0

droYak3

GAAAATGGCGGATGAACAACCAAATCTTGTAGCCGGACACCCACCTGCATGTAAGTGCACT---------TTCATTGGTG-----------------TGT-----------------GTGTGG---GTGCA------------GGCGAG----C-T-TT-TGT-----TTTTTT-------TGGCAGCAATGTAATCTTATAAGAA----------------------------------AAAAGTGCCTTGTTGGCAATTAATAAGGCACCCAATAC-AATCAA-TTGC-CA-GAATATCTAC---GCCCTTATCAGTATCTGAACCTGTTTCTACCAA---------AGCTGATAAGTAAACAAACAAGC-ACACACAC------GCACG--C-----CTACGCCTACAAAGGCACGG	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.........................CTTGTAGCCGGACACCCACCTGC....................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	1	0	0	0	1	0	0	0	0
.....................AAATCTTGTAGCCGGACACCCACCTGC....................................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
GAAAATGGCGGATGAACAAC................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
..AAATGGCGGATGAACAACCA..............................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
......................AATCTTGTAGCCGGACACCCACCTGCA...................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................ATCTTGTAGCCGGACACCCACCTGC....................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................AATCTTGTAGCCGGACACCCACC.......................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.AAAATGGCGGATGAACAACCA..............................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......................AATCTTGTAGCCGGACACCCACCTGC....................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................ACCCAATAC-AATCAA-TTGC-CA-GAAT..........................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................ACCAAATCTTGTAGCCGGACACCCACC.......................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................CACCCAATAC-AATCAA-TTGC-CA-GAA...........................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................AACCAAATCTTGTAGCCGGACACCCACC.......................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.AAAATGGCGGATGAACAACC...............................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................CATTGGTG-----------------TGT-----------------GTGTGG---GT....................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......GGCGGATGAACAACCAAATCTTGTAGCC..................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0

droEug1

GAAAATGGCAGATGAACAACCCAATCTTGTGGCTGGACACCCACCTGCATGTAAGTGCACT---------TCCATGAGTG-----------------TGT-----------------ATGTG-TGTGTGCA------------GGCATC----T-T-TT--GTC----T--TTTCT--TTTTGACATCAACTAAATCCAATAAGAAATCTAC-----------------------------GAATTGCTTTGTTGGCAATTAATAATACGCCCAATCC-TATCAA-TTGC-CA-CAATATCTAC---GGCCTTATCAGTATCTTAACCTGTTTCGGCCAA---------CGCTGATAAGTAAACAAACAACC-ACACACAC------GCACA--C-----------TCACAAAGTCATTG	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GAAAATGGCAGATGAACAACCCAATCTTGTGGCTGGACACCCACCTGCATGTAAGTGCACT---------TGCATAGGTG-----------------TGC-----------------GTGT-----GTGCA------------GGCTTG----T-T-CTCCGT-----T--TTTCTCATTTCG---ACA----ATTCCAATAAGAAATCTAG-----------------------------GAGCTGCCCCGCTGGCAATTAACAATGCAACCAATCC-TATCAA-TTGC-CC-CAATATCTAC---GCCCTTATCAGTATC-TAACCTGTTTCGGCCAA---------AGCTGATAAGTAAACAAACAACCAGCACACAC------GCACA--CA-------------CAAAGGCATTG	Size	Hit Count	Total Norm	Total
No Reads

droTak1

GAAAATGGCAGATGAACAACCCAATCTTGTGGCTGGACACCCACCTGCATGTAAGTGCAAT---------TGCATTGGTG-----------------TGC-----------------GTGT-----GTGCA------------GGC---------T-TT---T-----T--TTT-------TGGGAACA-----GTTCAATAAGAAATCTAC-----------------------------GAATTGCCCCGCTGGCAATTAATAATGCAGCCAATCC-TATCAA-TTGC-CA-GAATATCTAC---G-CCTTATCAGTATCTTAACCTGTTTCG---------------GCTGATAAGTAAACAAACAAGCCGCACACAC------GCACA--CA-------------CAAAGGCATTG	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AAAAATGGCTGATGAACAACCCAATCTTGTTGCTGGACACCCACCTGCATGTAAGTGCACT---------TGCATTGGTG-----------------TGC-----------------GTGT-----GTGCA------------GTCATG----T-T-TT-TGT-----T--TTT-------CCACAAAA-----ATTCCATAGGAAATCAAC-----------------------------GAATTGCCCCGCTGGCAATTAATAATACTCCCAATCC-TATCAA-TTGC-CA-CAATATCTAC---TCCCTTATCAGTATCTTAACCTGTTTCGGCCAA---------AGCTGATAAGTAAACAAACAACTTGCACATAC------GCA----CA-------------CGAAGCCATTG	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GACAATGGCTGATGAACAACCCAATCTTGTTGCTGGACACCCACCTGCATGTAAGTGCACT---------TGCATTAGTG-----------------TGT-----------------GTGT-----GTGCA------------GGCATG----T-T-TT-TGT-----T--TTT-------CGACAATA-----ATTCCATAAGAAATCTAC-----------------------------GTACTGCCCTGCTGGCAATTAATAATGCTCCCAATCC-TATCAA-TTGC-CA-CAATATCTAC---GGCCTTATCAGTATTTTAACCTGTTTCGTCAAA---------TGCTGATAAGTAAACAAACAACCCGCACACACAA----ACACACATG-------------CAAAGACATTG	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GAAAATGGCAGATGAACAACCCAATCTTGTGGCTGGACACCCACCTGCATGTAAGTTATCT---------TGCAGTTGTG-----------------TGT-----------------GTCTGT---GTGCT------------GGCATGTTGTGTTTTTACGC-TTTTT--TTT------TTG--TAG-----AATCCAATAAGAAATCTAC-----------------------------G-ATTGCCCCGTTGGCAATTAATAAAGCACCAAATCC-TATCAA-TTGC-CA-CAATATCTACA--AACCTTATCAGTATCTTAACCTGTTTCGGCCAA---------AGCTGATAAGTAAACAAACAACTCGCACACAT------ACACA--C-------------------------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

GAAAATGGCAGATGAGCAACCGAATCTTGTGGCTGGCCACCCACCTGCACGTAAGTGCACT------TATTGCATTGGTA-----------------TGC-----------------GTGTGA---GTTCGTGCTCGGG----GGCATG----T-T-TT-TGT-----T--TT--------TGCC--CAAATAAATCCAATTGTAAGGCTGGGAGGTAC---------------------TTATTTGCCTTGCTGGCAATTAATAATGCAGCAATTCG-TATCAA-TGGC-CA-CAATATCTAC---GGCCTTATCAGTATTTTAACCTGTTTCGTCCAA---------AGCTGATAAGTAAACAAACAACCCGGGCTCGCACACACACA----CGC---ATAGGC--GCACATCTATTG	Size	Hit Count	Total Norm	Total
No Reads

droAna3

TAAAATGGCTGATGAGCAACCAAATCTGGTGGCCGGACACCCACCTGCACGTAAGTGCAAT---------TGCATTGGTG-----------------TGCAGCACGCG--TGGGTGTGTGT-----GTGCGTATGAAAA----GGAATG----T-T-TT-TGT-----T--TTC-------TG--AACA-----ATTCAATAAGC--------------------------CGGATGA--TAGAATGCCTTGCTGGCAATTAATTATACACCGATTCG-TATCAA-TAGC-CA-CAATATCTAC---TGCCTTATCAGTATTTTAACCTGTTTCGCCCAA---------TGCTGATAAGTAAACAAACTC-----ACACAC------TCTCA--CA-GCCGCACACCAACACAACAGTTG	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.................AACCAAATCTGGTGGCCGGACACCCAC........................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................TCAATAAGC--------------------------CGGATGA--TAGAATGC............................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0
.................AACCAAATCTGGTGGCCGGACACC...........................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
............................GTGGCCGGACACCCACCTGC....................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
.................AACCAAATCTGGTGGCCGGACACCCA.........................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
......GGCTGATGAGCAACCAAATCT.........................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................TTTTAACCTGTTTCGCCCAA---------T......................................................................	21	1	1.00	1	1	0	0	0	0	0
................CAACCAAATCTGGTGGCCGGA...............................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
..............................GGCCGGACACCCACCTGCA...................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
.AAAATGGCTGATGAGCAACC...............................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0
.......................ATCTGGTGGCCGGACACCCAC........................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................GTATTTTAACCTGTTTCGCCC..................................................................................	21	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................GGATGA--TAGAATGCCTTGCTG.....................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
..........GATGAGCAACCAAATCTGGT......................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
......................................................................................................................................................................................G--AACA-----ATTCAATAAGC--------------------------CGGAT........................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
.....................AAATCTGGTGGCCGGACACCCA.........................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
................CAACCAAATCTGGTGGCCGGACACCCACC.......................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	1	0	0	0	0
.........................CTGGTGGCCGGACACCCAC........................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0

droBip1

TAAAATGGCTGATGAGCAACCAAATCTGGTGGCCGGACACCCACCTGCACGTAAGTGCAAT---------TGCATCAGTG-----------------TGCGGCGGACG--TGG----GTGT-----GTGCGTTTGAAAA----GGAATG----T-T-TT-TGT-----T--TTT-------C-TCAAT-----AATCCAATAAGC--------------------------CGGATGA--TAGAATGCCTTGCTGGCAATTAACCATATACCGATTCG-TATGAA-TAGC-CC-CAATATCTAC---TGCCTTATCAGTATTTTAACATGTTTCGGCCAA---------AGCTGATAAGTAAACAAACTC-----ACACAC---------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

dp5

GAAAATGTCTGATGAACAACCCAATCTCGTGGCTGGACACCCACCTGCTTGTAAGTGTAAT---------TGCATAGGTA-----------------TTCTCCATGCGCTTTGATGTATTTGT---GTG--CTTGTGTGTGAATG--------T-G-----------------------------T------------------------AGGAGGTAAAAAGTATTAAAATGGCT-AT-GGAGGTGCTCCGCTGACAATTGATTGTGCACCCAATTCACAACAA-TAGC-CACCAATATCTAT---TGCCTTATCAGTATCTTAGCCTGCTTCGGCAGA---------TGCTGATAAGCAATAAGAAAAC------------------------------------------------G	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.............GAACAACCCAATCTCGTGGCT..................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0
................CAACCCAATCTCGTGGCTG.................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...............ACAACCCAATCTCGTGGCTGG................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................CAACCCAATCTCGTGGCTGGACACCCACC.......................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........TGATGAACAACCCAATCTCGTGG....................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................ACCCAATCTCGTGGCTGGA...............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........ATGAACAACCCAATCTCGTGGCTGGA...............................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................AATCTCGTGGCTGGACACCCACCT......................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............TGAACAACCCAATCTCGTG.....................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......GTCTGATGAACAACCCAATCTCGT......................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..........................TCGTGGCTGGACACCCACC.......................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................CAACCCAATCTCGTGGCTGGA...............................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................AACCCAATCTCGTGGCTGGAC..............................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........GATGAACAACCCAATCTCGTGGCT..................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........CTGATGAACAACCCAATCTCGTGG....................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
GAAAATGTCTGATGAACAACCC..............................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........TGATGAACAACCCAATCTCGTGGC...................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................CTCGTGGCTGGACACCCACCTGCTTG.................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................TCGTGGCTGGACACCCACCTGCTT..................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................AACCCAATCTCGTGGCTGGACACCCACCT......................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................TCGTGGCTGGACACCCACCTGCTTTG................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............AACAACCCAATCTCGTGGCTGGA...............................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....TGTCTGATGAACAACCCAATCTCGTGG....................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................TGTGTGAATG--------T-G-----------------------------T------------------------AGGAGGT...........................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	1
........CTGATGAACAACCCAATCTCGTGGCT..................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........TGATGAACAACCCAATCTCGTGGCTGG................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............GAACAACCCAATCTCGTGGCTGGAC..............................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.......TCTGATGAACAACCCAATCT.........................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................TGGCTGGACACCCACCTGCT...................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............TGAACAACCCAATCTCGTGGCTGGAC..............................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....TGTCTGATGAACAACCCA.............................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	1
...........................CGTGGCTGGACACCCACCTGCTTTG................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................CTCGTGGCTGGACACCCACCTGCTT..................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................CGTGGCTGGACACCCACCTGCTTA.................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..AAATGTCTGATGAACAACCC..............................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
GAAAATGTCTGATGAACAACCCAAT...........................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TGTGTGTGAATG--------T-G-----------------------------T------------------------AGGAGTG...........................................................................................................................................................................................................	22	6	0.17	1	0	1	0	0	0	0	0	0	0	0

droPer2

GAAAATGTCTGATGAACAACCCAATCTCGTGGCTGGACACCCACCTGCTTGTAAGTGTAAT---------TGCATAGGTA-----------------TTCTCCATGCGCTTTGATGTATTTGT---GTG--CTTGTGTGTGAATG--------T-G-----------------------------T------------------------AGGAGGTAAAAAGTATTAAAATGGCT-AT-GGAGGTGCTCCGCTGGCAATTGATTGTGCACCCAATTCACAACAA-TAGC-CACCAATATCTAT---TGCCTTATCAGTATCTTAGCCTGCTTCGGCAGA---------TGCTGATAAGCAATAAGAAAAC------------------------------------------------G	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..AAATGTCTGATGAACAAC................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	3.00	3	3	0	0	0	0	0
.....TGTCTGATGAACAACCCAATCTCGTGGCT..................................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	1	0	0	0	0
.....TGTCTGATGAACAACCCAATCTCGTGGC...................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0
..................ACCCAATCTCGTGGCTGGA...............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
.....................CAATCTCGTGGCTGGACACCCACCTGC....................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
......GTCTGATGAACAACCCAATCTCGT......................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
....ATGTCTGATGAACAACCC..............................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
.......TCTGATGAACAACCCAATCTC........................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0

droWil2

A--TATGGCTGATGAACAACCAAATCTTGTGGCGGGCCACCCACCTGCACGTAAGTGCAAGTCCACATGTTTCAAT---G-------------TGTGTGT-----------------GTGTGT---GTGTA------------TGC---------------------------T-------TGGGAGTAATGAACAATTATTTG-----------------------------GTG-CTCCAAAATGCTTTGTTGGCAATTTTAAATGTACTCAATTT-AATTAAATAGTTCATAAATATCTTGAGGTACCTTATCAATATATTCACCTGCTTCACCCAATTTCATAGAGGCTGATAAGTAAACAAAGCA--------------------------------------------------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
....ATGGCTGATGAACAACCA..............................................................................................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	2	0	0	0	0
...TATGGCTGATGAACAACC...............................................................................................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	2	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................CATAGAGGCTGATAAGTAAACAAAG....................................................	25	1	1.00	1	0	1	0	0	0
................................................................................................GTGT-----------------GTGTGT---GTGTA------------TGC---------------------------T-------TGGGAGTAA......................................................................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0
...TATGGCTGATGAACAACCAAATCTTG.......................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................CACCCAATTTCATAGAGGC....................................................................	19	1	1.00	1	1	0	0	0	0
...TATGGCTGATGAACAACCAAA............................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0
.....................................................................................................................GTGTGT---GTGTA------------TGC---------------------------T-------TGGGA..........................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0
...TATGGCTGATGAACAACCA..............................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0
A--TATGGCTGATGAACAACCAAATC..........................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0
..................................................................................................GT-----------------GTGTGT---GTGTA------------TGC---------------------------T-------TGGGAGTAA......................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0
................CAACCAAATCTTGTGGCGG.................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0
A--TATGGCTGATGAACAAC................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0
..............................................................................................GTGTGT-----------------GTGTGT---GTGTA------------TG...................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0

droVir3

AAACATGGCTGATGAACAACCAAATTTGGTAGCTGGACATCCACCTGCATGTAAGTGCACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.....................AAATTTGGTAGCTGGACATCCACC.......................................................................................................................................................................................................................................................................................................................................................................................	24	1	3.00	3	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................TTGGTAGCTGGACATCCACC.......................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................GGTAGCTGGACATCCACCTGC....................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................AACCAAATTTGGTAGCTGGA...............................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................AATTTGGTAGCTGGACATCCACCT......................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
....................CAAATTTGGTAGCTGGACA.............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................CCAAATTTGGTAGCTGGA...............................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............ACAACCAAATTTGGTAGCTGGA...............................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................TTTGGTAGCTGGACATCCG.........................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................TGGTAGCTGGACATCCACC.......................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................AAATTTGGTAGCTGGACATCC..........................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ACCAAATTTGGTAGCTGGA...............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................AACCAAATTTGGTAGCTGGAC..............................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................GGTAGCTGGACATCCACC.......................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..ACATGGCTGATGAACAACCAAA............................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GATGAACAACCAAATTTGGTAGCT..................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....ATGGCTGATGAACAACCAAATTTGGT......................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................AACCAAATTTGGTAGCTGGACATCCACCT......................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................TTGGTAGCTGGACATCCACCTGC....................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AAACATGGCTGATGAACAACCAAATT..........................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................ATTTGGTAGCTGGACATCCACCTG.....................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................TTTGGTAGCTGGACATCCACCTGCA...................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................TTTGGTAGCTGGACATCCACC.......................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............GAACAACCAAATTTGGTAGCTGGACATCC..........................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................CAACCAAATTTGGTAGCTGG................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AAACATGGCTGATGAACAACCAAAT...........................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................TCCACCTGCATGTAAGTGCA.........................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

AAACATGGCGGACGAACAACCGAATCTAGTAGCTGGACACCCACCTGCATGTAAGTGCATT---------TAGAG----ATTCTCTTCCATTGTG--TGT-----------------GTTG-----G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.............GAACAACCGAATCTAGTAGCT..................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	2	0	0	0	0	0
..........GACGAACAACCGAATCTAGTAGCT..................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	2
......................AATCTAGTAGCTGGACACCCACCTG.....................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
...CATGGCGGACGAACAACCGAAT...........................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.......................ATCTAGTAGCTGGACACCCACCTG.....................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
..............................AGCTGGACACCCACCTGCA...................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0
...CATGGCGGACGAACAACCGA.............................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
......GGCGGACGAACAACCGAATCTAGTAGCT..................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
.........GGACGAACAACCGAATCTAGTAGCT..................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0

droGri2

---AATGGCTGATGAACAACCCAATCTGGTGGCTGGACACCCACCTGCATGTAAGTGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
............................GTGGCTGGACACCCACCTG.....................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0
...AATGGCTGATGAACAACCCA.............................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0
...............ACAACCCAATCTGGTGGCTGGAC..............................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0

dsi_3068

2r:7956303-7956452 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads