ID:

dsi_30662

 Coordinate:

2l:14913027-14913246 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-45.8 -45.8 -45.8

Flybase annnotation

exon [2l_14913247_14913476_-]; CDS [2l_14913247_14913476_-]; CDS [2l_14912905_14913026_-]; exon [2l_14912872_14913026_-]; intron [2l_14913027_14913246_-]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTTGAAGGATCTCAACGATTTCGGGGCCGTCAATGAGGTCTACAAGCGGGGTGAGTACTAGGCATATGGTATATTATTTATAAGCGTCGTTTATAATGCAATACCTACTGTATACACCGGCCTTTTGATCGCAATCGCCTGATAAGGCAATCGGCATCGTTAGCGCCTTATCGCCCATTTATTGTTTGCTGTAAACACTTTATGACAGCTATACTATATTAGCAAAAACAACTATGTTTATGCTTTATGTGTTCTTATCTGCCGTTTCAGTGTTCAATAAGGATTTCCCGGCCCGCAGCTGTTTCCAGGTGGCCAAGCTG
**************************************************.((((.....(((((((((((((....(((((((.((.(((((((..((((.......((........(((((..((((.((.((.((((....)))).))..))))))..)).)))........))........))))))))))))))))))))....)))))))))..((((.(((((....))))).))))...............))))..)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M023
head
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
...........................CGTCAATGAGGTCTACAAGCGGGT............................................................................................................................................................................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........TCAACGATTTCGGGGCCGTCAA............................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................CGTCAATGAGGTCTACAAGCGGGTGT........................................................................................................................................................................................................................................................................... 26 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........CTCAACGATTTCGGGGCC.................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.................ATTTCGGGGCAGTCAATGAGGT......................................................................................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................GTTTCAGTGTTCAATAAGG...................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
....AAGGATCTCAACGATTTCGGGGC..................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......GATCTCAACGATTTCGGGGC..................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............TGATTTCGGGGCCGTCAATGAGGT......................................................................................................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................GTAAACACTTTATGACAGCT.............................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............CAACGATTTCGGGGCCGTCATT.............................................................................................................................................................................................................................................................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CTATACTAGCAACAACAACT....................................................................................... 20 2 4 1.00 4 0 0 0 0 3 1 0 0 0 0 0
.........................................................................................................TATTGCACACACCGGCCTTT................................................................................................................................................................................................... 20 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................TGACAGCTATAGTGTATTAGCTA............................................................................................... 23 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................CCTGATAGGGTAATCGGCC.................................................................................................................................................................... 19 3 5 0.40 2 0 2 0 0 0 0 0 0 0 0 0
.....................................................................................................TACCTACTGAATACATCGGA....................................................................................................................................................................................................... 20 3 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................................TATATTAGCAAAAAAGACT....................................................................................... 19 2 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0
.ATGAAGGATCACAACGGTTT........................................................................................................................................................................................................................................................................................................... 20 3 11 0.18 2 0 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................ATAAGGCAACCAGCATCG................................................................................................................................................................. 18 2 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0
..................................................................TGGTATATTAACTCTAAGCG.......................................................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................CCTGAGAGGGCAATCGGCC.................................................................................................................................................................... 19 3 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0
..TGAAGGCTCTCAACG............................................................................................................................................................................................................................................................................................................... 15 1 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................CACCCTTTTATTGTTCGCTGT................................................................................................................................ 21 3 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................................................................................................CGCAGCTGTTTCCTGGGGGG....... 20 3 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0
.............................................GCGTGGTTAGTACTAG................................................................................................................................................................................................................................................................... 16 2 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................ACCTGATAAGGCAAT......................................................................................................................................................................... 15 1 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................CCGCAGCTGTCTCCA............. 15 1 15 0.07 1 0 0 0 0 0 0 0 0 0 0 1
....................................................................................................................................................................................................................ACTATACTAGCAACAACA.......................................................................................... 18 2 15 0.07 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................CTATACTAGCAACAACAAC........................................................................................ 19 2 16 0.06 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................ACATCGACCTTTTGAACGC............................................................................................................................................................................................ 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CTATACTAGCAACAACAA......................................................................................... 18 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................TCTGCATCGTTAGCGA.......................................................................................................................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
.TTGAAGGCTCTCAAGGA.............................................................................................................................................................................................................................................................................................................. 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

GAACTTCCTAGAGTTGCTAAAGCCCCGGCAGTTACTCCAGATGTTCGCCCCACTCATGATCCGTATACCATATAATAAATATTCGCAGCAAATATTACGTTATGGATGACATATGTGGCCGGAAAACTAGCGTTAGCGGACTATTCCGTTAGCCGTAGCAATCGCGGAATAGCGGGTAAATAACAAACGACATTTGTGAAATACTGTCGATATGATATAATCGTTTTTGTTGATACAAATACGAAATACACAAGAATAGACGGCAAAGTCACAAGTTATTCCTAAAGGGCCGGGCGTCGACAAAGGTCCACCGGTTCGAC
**************************************************.((((.....(((((((((((((....(((((((.((.(((((((..((((.......((........(((((..((((.((.((.((((....)))).))..))))))..)).)))........))........))))))))))))))))))))....)))))))))..((((.(((((....))))).))))...............))))..)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
.........................CGGCAGTTACTCCAGATGTT................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................ACGGCAAAGTCACAAGTTATTCCT..................................... 24 0 1 1.00 1 0 1 0 0 0 0
..........................GGCAGTTACTCCAGATGTT................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................ATATGCTATAATCGTTT.............................................................................................. 17 1 3 0.33 1 0 0 1 0 0 0
...........................................................................................................................................................................................CGACATTTGTGAGATTCT................................................................................................................... 18 2 5 0.20 1 0 0 0 0 1 0
.....TCCTAGCGTTGCTAACGC......................................................................................................................................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 1 0 0
..............................................................................................................................................................................................................................................................................................................AAGGTTCACCCGTTCGAC 18 2 11 0.09 1 0 0 0 1 0 0
................................................................................................ACGTTATGGATGGAATA............................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:14912977-14913296 - dsi_30662 CTTGAAGGATCTCAACGATTTCGGGGCCGTCAATGAGGTCTACAAGCGGGGTGAGT-ACTA--GG-------------------------------------------------------------CA-------------------------------------TATGGT--------------------------------------------------------------------------------------------------------------AT---------------------------------------------------------------------------ATTAT------TTATAAGCGTCGTTTATAATGCAATACCTACTGTA---TACA-CC------GGCCTTTTGATCGCAATCG----CCTGATAAGGCAATCGGCATCG---TTAGCGCC------------TTATCGCC----------C-ATTTATTGTTTGC----TGTAAA-------------------------------------------CACTTTATGACA--GCT--ATACT------AT---------ATTA--------GC-AAAAACA-AC----TATGTTTATGCTTTA-TG--TGTT-CTTATCTGCC--GTTTCAGTGTTCAATAAGGATTTCCCGGCCCGCAGCTGTTTCCAGGTGGCCAAGCTG
droSec2 scaffold_3:1536000-1536326 - CTTGAAGGATCTCAACGATTTCGGGGCCGTCAATGAGGTCTACAAACGGGGTGAGT-ACTA--GG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGTGA-ATACTAAG-------------------------------------------------------------CACTAT------TTATAAGCGTCGTTTATAATGCAATACCTACTGTA---TACA-CC------GGCCTTTTGATCGCAATCG----CCTGATAAGGCAATCGGCATCG---TTAGCGCC------------TTATCGCC----------C-ATTTATTGTTTGC----TGTAAA-------------------------------------------CACTTTATGACA--GCT--ATACT------AT---------ATTT--------CC-AAAAACA-AC----TATGTATATGCTTTA-TG--TTTC-CTTATCTGCC--GTTTCAGTGTTCAATAAGGATTTCCCGGCCCGCAGCTGTTTCCAGGTGGCCAAGCTG
dm3 chr2L:15274341-15274669 - CTTGAAGGATCTCAACGATTTCGGGGCAGTCAATGAGGTCTACAAGCGGGGTAAGT-ACTA--GG-------------------------------------------------------------CA-------------------------------------TATGGC--------------------------------------------------------------------------------------------------------------TTGTGA-ATACTAAG-------------------------------------------------------------CACTAT------TTATAAGGGTCGTTTATAATGCAATACCTACTGTA---TACA-CC------GGCCTTTTGATCGCAATCG----CCTGATAAGGCAATCGGCATCG---TTAGCGCC------------TTATCGCC----------C-ATTTATTGTTAAC----TGTAAA-------------------------------------------CACTTTATGGCA--GCT--ATGCT------AT---------ATTT--------CC-AAAAACA-AC----T----ATATGCTTTA-TG--TCTC-CTTATCTGCC--GTTTCAGTGTTCAATAAGGATTTCCCGGCCCGCAGCTGTTTCCAGGTGGCCAAGCTG
droEre2 scaffold_4929:7019097-7019471 - der_1275 CTTGAAGGATCTCAACGATTTCGGGGCCGTCAATGAGGTCTACAAGCGTGGTAAGTTACTTAGTACT--T--------------------------------------------------A------------------------------------------------GTTTAGTTACTTAGTTTCTTA-----GTTGCAA------------ATAGAC----------------------------------TAGAATAGAA-----------------------CA-----------------TT-------------------------------------CATAATATTTAGCC-CATGTTACTATATAAAGTTCGTTTATAGAGCAATACCTACTGTA---T--A-CC------GGCCTTTTGATCGCAATCG----CCTGATAAGGCAATCGGCATCA---TTAGCGTC------------TTATCGCC------------ATTTATTGTTTAC----TGTAAA-------------------------------------------CACTTTATGACA--GCT--ATACT------AT---------ATTA--------CC-AAAAACA-AC----C----GTATGCTTTA-TG--TTT--CTTATCTGCC--GTTCCAGTGTTTAACAAGGATTTCCCGGCCCGCAGCTGTTTCCAGGTGGCCAAGCTG
droYak3 2L:20056404-20056772 + CCTGAAGGATCTCAACGACTTCGGGGCCGTCAACGAGGTCTACAAGCGTGGTAAGT-ACTAAGTAC---------------------------------------------------------------------------------------------------------------------------------GTTGCAA------------ATAGTCAC------------------------------ATAACATA----TACTTTTGGTTAGCTTTTTCTAA-ATACTTAG-------------------------------------------------------------CCGCAT------TTATAAAATTCGTTTATATGGCAATACCTACTGTA---T--A-CC------AGCCTTTTGATCGCAATCG----CCTGATAAGGCAATCGGCATCG---TTAGCGCC------------TTATCACC----------C-ATTTATTGTTTAC----TGTAAA-------------------------------------------AACTTTATGACA--GCT--ATACT------AT---------ATTA--------AC-AAAAAGA-ACCCCATATGTATATGGTTTA-TG--TTT--CTTATCTGCC--GTTCCAGTGTTTAACAAGGATTTCCCGGCCCGCAGCTGTTTCCAGGTGGCCAAGCTG
droEug1 scf7180000409231:179506-179849 - TCTGAAGGATCTCAACGATTTCGGAGCCGTTAATGAGGTCTACAAGAAGGGTGAGT-AAA--ATATC--------------------------------------------------------------------------------------------------------------------------------------------------------T----------------------------------AAAAAAAAGA-----------------------AATGCATAA-------------------------------------------------------------AACTAT------ATATAAATATAGTTCATATGGCAATACCTACTGTA---T--A-CC------GGCCTTTTGATCGAAGTCG----CCTGATAAGGCAATCGGCATCG---TTAGCGCC------------TTATCACC----------CTGTTTATTGTTTAC----AGTAAA-------------------------------------------CATTTTATGACA--GCT--ATTCTCATAATATTTTTGTTGTTATTC-------CTCAAAA-AA-AC----T----ATATGCTTTA-TG--TTTG-CTTATCTGCT--GTTCCAGTGTTCAATAAGGATTTCCCGGCTCGCAGTTGTTTCCAGGTGGCCAAGTTG
droBia1 scf7180000302261:1301866-1302297 + CTTGAAGGATCTCAACGATTTCGGGGCCGTCAATGAGGTGTACAAGAAGGGTGAGT-ACT--GTTCTATTAAATTTATACTTTCATATTTTT---------TTTAATTAGTCAAATGCTTGTTAGGCACCT-----------------CCCTACCTTTAAATACACATTGTT------------------GGTATATTGTAAAATCTATTTTTAATAGTGCC------------------------------TTACCAT-----T-------------------------------------------------------------------------------------------------------------AATTTTGGTTATATGGCAATACCTACTGTA---G--A-CT------TGCCTTTTGATCGTTGTCG----CCTGATAAGGCAATCGGCATCG---TTAGCTTC------------TTATCGCC----------CTATTTATTGGTCAC----TATAAA-------------------------------------------CATTTTATGAGA--GCG--TTTCTCGTATTATTCTTGTTGTATTT--------CC-AAAAACAAAC----C----GTATGCTTTA-TG--TTTG-CTTATCTGCC--GTTTCAGTGTTCAATAAGGATTTCCCGGCCCGCAGCTGTTTCCAGGTGGCCAAGTTG
droTak1 scf7180000415438:123181-123405 - C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATACCTACTGTA---T--A-CC------GGCCTTTTGATCGATGTCG----CCTGATAAGGCAATCGGCATCG---TTAGCGTC------------TTATCGCC----------CTATTTATTGTTTACCTATTATAAA-------------------------------------------CATTTTATGACA--------------TATTATTCTTGTTGTATTT--------CC-AAAAAA--AA----T----GTATGCTTTA-TG--TTTG-CTTATCTGCC--GTTTCAGTGTTCAATAAGGATTTCCCGGCTCGCAGTTGTTTCCAGGTGGCCAAGCTA
droEle1 scf7180000491028:760135-760519 + CCTAAAGGATCTCAACGATTTCGGGGCCGTCAATGAGGTCTACAAAAAAGGTGAAT-ACA--GTACT--T--------------------------------------------------A------------------------------------------------TT--------------------------------------------------------------------------------------------------------------TTGTAA-AAATAAAA--------TATTTTTTGTAAGTAATTTTTTATACTAATTGAAACTTTGTCTTAATATTT------ATATTTTAATG----TAAAGTTTATATAGGAATACCCACTGTA---T--A-CC------GGCCTTTTGATCGGTGTCG----CCTGATAAGGCAATCGGCATCG---TTAGCGCC------------TTATCACCTT--------C-ATTTATTGTTTAC----TGTAAA-------------------------------------------CATTTTATGACT--GCT--ATTTTCATGTTGTTTTTATTGCAATT--------TC-AAAA----------T----ATGTGCT-TA-TG--TTTG-CTTATCTGCC--GTTTCAGTGTTCAATAAGGATTTCCCGGCTCGCAGTTGTTTCCAGGTGGCCAAGTTG
droRho1 scf7180000780250:15283-15529 - ATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT------TTTTTAATTAAGCTTATATAGCAATACCTACTGTA---T--A-CC------AGCCTTTTGATCGGTGTCG----CCAGATAAGGCAATCGGCATCG---TTAGCGCC------------TTATCGCT----------CTATTTATTGTTTAC----AGTAAA-------------------------------------------CATTTTATGATA--GCT--ATTT-----------TTGTTGTGTTT--------TC-AAAAAAA-AC----T----ATATGCTTTA-TG--TTTG-CTTATCTGCC--GTTTCAGTGTTCAATAAGGAATTCCCGGCCCGCAGTTGTTTCCAGGTGGCCAAATTA
droFic1 scf7180000454087:285377-285723 + CTTGAAGGATCTTAACGATTTTGGAGCTGTCAATGAGGTCTACAAGAAGGGTAAGT-ACTA--TATC--------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------------AAAAAA----GACTTTTG-------T-TTTTAAAGTATTTAT-------------------------------------------------------------AGCAAT------TTATAA-TAAACCTTATATAGCAATACCTACTGTA---T--A-CC------GCCCTTTTGATCGCCGTCA----CTTGATAAGCCAATCGGCATCG---TTAGCGCC------------TTATCACT----------CCATTTATTGTTTAC----TGTAAA-------------------------------------------CATTTTATGACAGAGCC--ATACT------GTAGTTGTTGT-TTT--------CC-AAAAA-A-AT----T----ATATGCTTTA-TG--TTTG-CTTATCTGCC--GTTCCAGTGTTCAATAAGGACTTCCCGGCCCGCAGTTGTTTCCAAGTGGCCAAGTTA
droKik1 scf7180000300796:344840-345301 - CCTGAAGGATCTCAATGATTTTGGGGCCGTCAATGAGGTCTACAAGAAGGGTGAGC-ATA--ATCT---TAGATTTAAA-------------ATAAAAACACCTAAGAACTTAAATATTTTTTAAACATTTTAAACATTGTGTAATGATTTTACCCTCAAATATAA----------------------------------------------------AGCCTAAATTATTTACTATAATACCTTAATAATATTAACAT-----TAA-TTTGG------TTTTATTA-A------------------------------------------------------------------------------------AATTGTAGTCTATATACCATTACCCACTGTAG--TATA-CC------GGCCTTTTGGCCATTGCCG----CCTGATAAGGCAATCGGCATCG---TTGGCACC---------CTCTTATCGAC----------GTCTTTATTGTTTAC----TGTAAA-------------------------------------------CATTTTATGACA--GCT--ATTCTGGTGTTATTT---------TTCCATTATTTC-ATAAA-T-AC----T----ATATGCCTTATTG--TTTGACTTATCATCATTTTTTCAGTGTTCAATAAGGATTTCCCGGCCCGCAGTTGTTTCCAGGTGGCCAAGTTA
droAna3 scaffold_12916:7575868-7576210 - CCTGAAGGATCTTAACGACTTTGGAGCTGTCAACGAGGTTTACAAAAAGGGTGAGC-AATA--CGT------------------------------------------------------ACTAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCT-TCAATAAAC--TT-----------------CATAAATATATTAATATCATCATAATA-------------------ATAATGGTTATTTTTA-ACCAATACCTACTGTA---T--A-CC------AGCCTTTGTGGTGTTGCCGTTGATTTGATAAGGCAATCGGCATCG---TT-GCACC------------TTATCGCC----------CAGTTTATTGTTTAC----TGTAAA-------------------------------------------CATTTTATGACA--TTT--T---------------------TTTT--------AC-GAAAAA--A----------ATATGCTTTA-TGTGGTGG-CTTATCTCTA--ATTTCAGTGTTCAATAAGGACTTTCCGGCTCGAAGCTGTTTCCAAGTGGCCAAACTG
droBip1 scf7180000396554:191730-192060 - TCTCAAGGATCTTAACGACTTTGGAGCTGTCAACGAAGTTTACAAAAAGGGTGAGT-AAA--GTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTA-ATACTA-CCGATAAAT--TT-----------------TATAATTATAGTAACATCATCATAATA-------------------ATAATTGTTATTTTTA-ACCAATACCTACTGTA---T--A-CC------GGCCTTTGTGGCG-TGCCG-----TTGATAAGTCAATCGGCATCG---TT-GCACC------------TTATCGCC----------CTGTTTATTGTTTAC----TGTAAA-------------------------------------------CATTTTATGACA--TTT-------------------------TTT--------AC-GAAAAA--A----------ATATGCTTTA-TG--TC-G-CTTATCTTTA--CTTTCAGTGTTCAATAAGGACTTCCCGGCTCGTAGCTGTTTCCAAGTGGCCAAATTG
dp5 4_group4:2523844-2524106 + CCTGAAAGATCTGAACGACTTTGGTGCTGTCAATGAGGTGTACAAGCGGGGTGAGT-GTA--GTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---T--T-GCGGGGTCTGGCTTTGGGTCGATGCCG----CTTGATAAGGCAATCGG-ACCG---G-AGCGCC------------TTATCAGCGTCTATATGTGTGTTTATTCTCTGC----TGTAAA-------------------------------------------C-CTTTACGACT--ACT-------CGTATTATTCT---------------------------------------------CATTA-TG--TTTG-CTTATCTATC--TCCGTAGTGTTCAATAAGGACTTTCCGGCCCGCAGCTGTTTCCAGGTGGCCAAGCTG
droPer2 scaffold_10:1533303-1533565 + CCTGAAAGATCTGAACGACTTTGGTGCTGTCAATGAGGTGTACAAGCGGGGTGAGT-GTA--GTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---T--T-GCGGGGTCTGGCTTTGGGTCGATGCCG----CTTGATAAGGCAATCGG-ACCG---G-AGCGCC------------TTATCGGCGTCTATATGTGTGTTTATTCTCTGC----TGTAAA-------------------------------------------C-CTTTACGACT--ACT-------CGTATTATTCT---------------------------------------------CATTA-TG--CTTG-CTTATCTATC--TCCGTAGTGTTCAATAAGGACTTTCCGGCCCGCAGCTGTTTCCAGGTGGCCAAGCTG
droWil2 scf2_1100000004577:1890458-1890715 + CCTTAAGGATCTTAATGATTTTGGAGCCGTCAATGAGGTGTACAAGCAAGGTGGGT-AGA--ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC-ATTTCATTAG--CGCG------GGCCCCTTGACTG-----------ATGATAAGGGAATCGGCATCGGTTTTTGGACC------------TTATCACA----------A-----------CAC----AATAAACATTATACTTTTATTATTAGAGC-TC--------AATTATAAAA--T-----------TAATTT-GTT----------------------------------------------------TTGCTC---TG--TTTG-TT-------T--TTTGCAGTGTTTAATAAGGATTTTCCAGCACGCAGCTGTTTCCAAGTGGCCAAATTA
droVir3 scaffold_12963:11925464-11925680 - CTTGAAAGATCTGAACGACTTTGGTGCGGTCAACGAGGTGTACAAGCGGGGTGAGC-ATT----C----------------------------------------------CAATAGCTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATACAAGTGCCA-----ACGATAAGGCAG-CGGCATCTG--CT---GGCTTATCAGGCG----------------------------------T----------------------ACTAAGCAC--------------------AAC-ATTTACGATT---CAACTT-ATC-T--------------------------------------------------G--------TG------------CTC-T--TTTTCAGTGTTCAATAAGGACTTTCCGGCACGCAGCTGCTTCCAGGTGGCCAAGCTG
droMoj3 scaffold_6500:20629712-20629935 - TCTTAAAGATCTGAATGACTTTGGTGCGGTCAACGATGTGTACAAACGAGGTGAGC-AGT----C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--A-AT------TGGTTTTATATTGTTTTTG-----CCGATAAGCCA-GCGGCATCT-----GTCGTC------------TTATCAAA----------TTTCCAATTGACGAC---------------------------GAGAGCAATAAAAACATAATCGATAACAT------------------------------------------------------------------------------------------------TTTGCG--GTTACAGTGTTCAACAAGGACTTTCCAGCACGCAGCTGCTTCCAGGTGGCCAAGCTG
droGri2 scaffold_15126:5469954-5470207 - dgr_396 CTTGAAAGATCTCAACGACTTTGGTGCGGTCAACGAAGTGTACAAACGAGGTAAAC-AGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAATTTACAATTGCCG-----CCGATAAGGCA-TCGGCATCTG--CT---GGCTTATCAGCCG--TCATGGCA----------A-----------CAC----TTCTAATATAAGAACTTTACTACGCAAACAAC--------AATCGTAAACA-TTTACGATG---CG--ATTGCGACG-----------------------------A-----------------------AC---TG------------CTCTC--TTTGCAGTGTTCAATAAGGATTTCCCTGCCCGTAGCTGCTTCCAGGTGGCCAAACTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CTTGAAGGATCTCAACGATTTCGGGGCCGTCAATGAGGTCTACAAGCGGGGTGAGT-ACTA--GG-------------------------------------------------------------CA-------------------------------------TATGGT--------------------------------------------------------------------------------------------------------------AT---------------------------------------------------------------------------ATTAT------TTATAAGCGTCGTTTATAATGCAATACCTACTGTA---TACA-CC------GGCCTTTTGATCGCAATCG----CCTGATAAGGCAATCGGCATCG---TTAGCGCC------------TTATCGCC----------C-ATTTATTGTTTGC----TGTAAA-------------------------------------------CACTTTATGACA--GCT--ATACT------AT---------ATTA--------GC-AAAAACA-AC----TATGTTTATGCTTTA-TG--TGTT-CTTATCTGCC--GTTTCAGTGTTCAATAAGGATTTCCCGGCCCGCAGCTGTTTCCAGGTGGCCAAGCTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................CGTCAATGAGGTCTACAAGCGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
...........TCAACGATTTCGGGGCCGTCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
...........................CGTCAATGAGGTCTACAAGCGGGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
..........CTCAACGATTTCGGGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCAGTGTTCAATAAGG......................................1911.00100001000000000000
....AAGGATCTCAACGATTTCGGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.......GATCTCAACGATTTCGGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAA-------------------------------------------CACTTTATGACA--GCT--.................................................................................................................................................2011.00100100000000000000
droSec2
CTTGAAGGATCTCAACGATTTCGGGGCCGTCAATGAGGTCTACAAACGGGGTGAGT-ACTA--GG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGTGA-ATACTAAG-------------------------------------------------------------CACTAT------TTATAAGCGTCGTTTATAATGCAATACCTACTGTA---TACA-CC------GGCCTTTTGATCGCAATCG----CCTGATAAGGCAATCGGCATCG---TTAGCGCC------------TTATCGCC----------C-ATTTATTGTTTGC----TGTAAA-------------------------------------------CACTTTATGACA--GCT--ATACT------AT---------ATTT--------CC-AAAAACA-AC----TATGTATATGCTTTA-TG--TTTC-CTTATCTGCC--GTTTCAGTGTTCAATAAGGATTTCCCGGCCCGCAGCTGTTTCCAGGTGGCCAAGCTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................ATTTCGGGGCCGTCAATGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020101
...............................AATGAGGTCTACAAACGGGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
.............AACGATTTCGGGGCCGTCAATGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
................................ATGAGGTCTACAAACGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAATAAGGATTTCCCGGCCCGCA.......................2611.0010010
..............................CAATGAGGTCTACAAACGGGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
................GATTTCGGGGCCGTCAATGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
......................................................GT-ACTA--GG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGTGA-ATACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
dm3
CTTGAAGGATCTCAACGATTTCGGGGCAGTCAATGAGGTCTACAAGCGGGGTAAGT-ACTA--GG-------------------------------------------------------------CA-------------------------------------TATGGC--------------------------------------------------------------------------------------------------------------TTGTGA-ATACTAAG-------------------------------------------------------------CACTAT------TTATAAGGGTCGTTTATAATGCAATACCTACTGTA---TACA-CC------GGCCTTTTGATCGCAATCG----CCTGATAAGGCAATCGGCATCG---TTAGCGCC------------TTATCGCC----------C-ATTTATTGTTAAC----TGTAAA-------------------------------------------CACTTTATGGCA--GCT--ATGCT------AT---------ATTT--------CC-AAAAACA-AC----T----ATATGCTTTA-TG--TCTC-CTTATCTGCC--GTTTCAGTGTTCAATAAGGATTTCCCGGCCCGCAGCTGTTTCCAGGTGGCCAAGCTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................GTCAATGAGGTCTACAAGCGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................................ATGAGGTCTACAAGCGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000
...............................AATGAGGTCTACAAGCGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000010000000
.................................TGAGGTCTACAAGCGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTTCGGGGCAGTCAATGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
................................ATGAGGTCTACAAGCGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.............................TCAATGAGGTCTACAAGCGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................CAATGAGGTCTACAAGCGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................TCAATGAGGTCTACAAGCGGGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGGATTTCCCGGCCCGCAGCTGT..................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................TCAATGAGGTCTACAAGCGGGGTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TCAACGATTTCGGGGCAGTCAATGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGTTCAATAAGGAT....................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGTTTCCAGGTGGCCAAGC..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AATGAGGTCTACAAGCGGGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............AACGATTTCGGGGCAGTCAATGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................GGCAGTCAATGAGGTCTACAAGCGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.........................GCAGTCAATGAGGTCTACAAGCGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........................AGTCAATGAGGTCTACAAGCGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GGCAGTCAATGAGGTCTACAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TCAACGATTTCGGGGCAGTCAATGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TGAAGGATCTCAACGATTTCGGGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAATAAGGATTTCCCGG.............................2011.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAAGGATTTCCCGGCC...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTATCTGCC--GTTTCAGTGTTCAA...........................................2411.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TCAATGAGGTCTACAAGCGGGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTTCCAGGTGGCCAA....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................A-ATACTAAG-------------------------------------------------------------CACTAT------TTATAAGGGTCG.....................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTCGGGGCAGTCAATGAGGTCTACAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATCTCAACGATTTCGGGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GTCAATGAGGTCTACAAGCGGGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............ACGATTTCGGGGCAGTCAATGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................GATTTCGGGGCAGTCAATGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGATTTCCCGGCCCGCAGCT....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAACGATTTCGGGGCAGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCCCGGCCCGCAGCTGTTTC...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCAGTCAATGAGGTCTACAAGCGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GAAGGATCTCAACGATTTCGGGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GATCTCAACGATTTCGGGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCAGTCAATGAGGTCTACAAGCGGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTTCGGGGCAGTCAATGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAGGTGGCCAAGC..1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................GATTTCGGGGCAGTCAATGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CTTGAAGGATCTCAACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CGGGGCAGTCAATGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGTTTCCAGGTGGCCAAG...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GAAGGATCTCAACGATTTCGGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTTCGGGGCAGTCAATGAGGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............CGATTTCGGGGCAGTCAATGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..TGAAGGATCTCAACGATTTCGGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GAAGGATCTCAACGATTTCGGGGCAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TCAATGAGGTCTACAAGCGGGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ACGATTTCGGGGCAGTCAATGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................AGTCAATGAGGTCTACAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TCAATGAGGTCTACAAGCGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTCCCGGCCCGCAGCT....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CAATGAGGTCTACAAGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATAAGGATTTCCCGAT............................1830.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................ATGCAATACCTACTGTG---A..........................................................................................................................................................................................................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CTTGAAGGATCTCAACGATTTCGGGGCCGTCAATGAGGTCTACAAGCGTGGTAAGTTACTTAGTACT--T--------------------------------------------------A------------------------------------------------GTTTAGTTACTTAGTTTCTTA-----GTTGCAA------------ATAGAC----------------------------------TAGAATAGAA-----------------------CA-----------------TT-------------------------------------CATAATATTTAGCC-CATGTTACTATATAAAGTTCGTTTATAGAGCAATACCTACTGTA---T--A-CC------GGCCTTTTGATCGCAATCG----CCTGATAAGGCAATCGGCATCA---TTAGCGTC------------TTATCGCC------------ATTTATTGTTTAC----TGTAAA-------------------------------------------CACTTTATGACA--GCT--ATACT------AT---------ATTA--------CC-AAAAACA-AC----C----GTATGCTTTA-TG--TTT--CTTATCTGCC--GTTCCAGTGTTTAACAAGGATTTCCCGGCCCGCAGCTGTTTCCAGGTGGCCAAGCTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........TCAACGATTTCGGGGCCGTCAATGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
CTTGAAGGATCTCAACGATTTCGGGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
..........CTCAACGATTTCGGGGCCGTCAATGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
...........TCAACGATTTCGGGGCCGTCAATGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.........................GCCGTCAATGAGGTCTACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
..............ACGATTTCGGGGCCGTCAATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
..................................................................T--T--------------------------------------------------A------------------------------------------------GTTTAGTTACTTAGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19150.1321100000
droYak3
CCTGAAGGATCTCAACGACTTCGGGGCCGTCAACGAGGTCTACAAGCGTGGTAAGT-ACTAAGTAC---------------------------------------------------------------------------------------------------------------------------------GTTGCAA------------ATAGTCAC------------------------------ATAACATA----TACTTTTGGTTAGCTTTTTCTAA-ATACTTAG-------------------------------------------------------------CCGCAT------TTATAAAATTCGTTTATATGGCAATACCTACTGTA---T--A-CC------AGCCTTTTGATCGCAATCG----CCTGATAAGGCAATCGGCATCG---TTAGCGCC------------TTATCACC----------C-ATTTATTGTTTAC----TGTAAA-------------------------------------------AACTTTATGACA--GCT--ATACT------AT---------ATTA--------AC-AAAAAGA-ACCCCATATGTATATGGTTTA-TG--TTT--CTTATCTGCC--GTTCCAGTGTTTAACAAGGATTTCCCGGCCCGCAGCTGTTTCCAGGTGGCCAAGCTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............CAACGACTTCGGGGCCGTCAACGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300000030000
............................GTCAACGAGGTCTACAAGCGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200000020000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG---TTAGCGCC------------TTATCACC----------C-ATT...................................................................................................................................................................................................................................2211.00100000010000
.............AACGACTTCGGGGCCGTCAACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
..............ACGACTTCGGGGCCGTCAACGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
....AAGGATCTCAACGACTTCGGGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
............................GTCAACGAGGTCTACAAGCGTGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..............................CAACGAGGTCTACAAGCGTGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2321.00200000020000
...........................CGTCAACGAGGTCTACAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.............................................................................................................................................................................................................................................................................TTGGTTAGCTTTTTCTAA-ATACTTAG-------------------------------------------------------------C............................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
.......GATCTCAACGACTTCGGGGCCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.....AGGATCTCAACGACTTCGGGGCCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
..........CTCAACGACTTCGGGGCCGTCAACGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100000000
..................CTTCGGGGCCGTCAACGAGGTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
................GACTTCGGGGCCGTCAACGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...........................CGTCAACGAGGTCTACAAGCGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.......GATCTCAACGACTTCGGGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
droEug1
TCTGAAGGATCTCAACGATTTCGGAGCCGTTAATGAGGTCTACAAGAAGGGTGAGT-AAA--ATATC--------------------------------------------------------------------------------------------------------------------------------------------------------T----------------------------------AAAAAAAAGA-----------------------AATGCATAA-------------------------------------------------------------AACTAT------ATATAAATATAGTTCATATGGCAATACCTACTGTA---T--A-CC------GGCCTTTTGATCGAAGTCG----CCTGATAAGGCAATCGGCATCG---TTAGCGCC------------TTATCACC----------CTGTTTATTGTTTAC----AGTAAA-------------------------------------------CATTTTATGACA--GCT--ATTCTCATAATATTTTTGTTGTTATTC-------CTCAAAA-AA-AC----T----ATATGCTTTA-TG--TTTG-CTTATCTGCT--GTTCCAGTGTTCAATAAGGATTTCCCGGCTCGCAGTTGTTTCCAGGTGGCCAAGTTGSizeHit CountTotal NormTotal
No Reads
droBia1
CTTGAAGGATCTCAACGATTTCGGGGCCGTCAATGAGGTGTACAAGAAGGGTGAGT-ACT--GTTCTATTAAATTTATACTTTCATATTTTT---------TTTAATTAGTCAAATGCTTGTTAGGCACCT-----------------CCCTACCTTTAAATACACATTGTT------------------GGTATATTGTAAAATCTATTTTTAATAGTGCC------------------------------TTACCAT-----T-------------------------------------------------------------------------------------------------------------AATTTTGGTTATATGGCAATACCTACTGTA---G--A-CT------TGCCTTTTGATCGTTGTCG----CCTGATAAGGCAATCGGCATCG---TTAGCTTC------------TTATCGCC----------CTATTTATTGGTCAC----TATAAA-------------------------------------------CATTTTATGAGA--GCG--TTTCTCGTATTATTCTTGTTGTATTT--------CC-AAAAACAAAC----C----GTATGCTTTA-TG--TTTG-CTTATCTGCC--GTTTCAGTGTTCAATAAGGATTTCCCGGCCCGCAGCTGTTTCCAGGTGGCCAAGTTGSizeHit CountTotal NormTotal
No Reads
droTak1
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATACCTACTGTA---T--A-CC------GGCCTTTTGATCGATGTCG----CCTGATAAGGCAATCGGCATCG---TTAGCGTC------------TTATCGCC----------CTATTTATTGTTTACCTATTATAAA-------------------------------------------CATTTTATGACA--------------TATTATTCTTGTTGTATTT--------CC-AAAAAA--AA----T----GTATGCTTTA-TG--TTTG-CTTATCTGCC--GTTTCAGTGTTCAATAAGGATTTCCCGGCTCGCAGTTGTTTCCAGGTGGCCAAGCTASizeHit CountTotal NormTotal
No Reads
droEle1
CCTAAAGGATCTCAACGATTTCGGGGCCGTCAATGAGGTCTACAAAAAAGGTGAAT-ACA--GTACT--T--------------------------------------------------A------------------------------------------------TT--------------------------------------------------------------------------------------------------------------TTGTAA-AAATAAAA--------TATTTTTTGTAAGTAATTTTTTATACTAATTGAAACTTTGTCTTAATATTT------ATATTTTAATG----TAAAGTTTATATAGGAATACCCACTGTA---T--A-CC------GGCCTTTTGATCGGTGTCG----CCTGATAAGGCAATCGGCATCG---TTAGCGCC------------TTATCACCTT--------C-ATTTATTGTTTAC----TGTAAA-------------------------------------------CATTTTATGACT--GCT--ATTTTCATGTTGTTTTTATTGCAATT--------TC-AAAA----------T----ATGTGCT-TA-TG--TTTG-CTTATCTGCC--GTTTCAGTGTTCAATAAGGATTTCCCGGCTCGCAGTTGTTTCCAGGTGGCCAAGTTGSizeHit CountTotal NormTotal
No Reads
droRho1
ATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT------TTTTTAATTAAGCTTATATAGCAATACCTACTGTA---T--A-CC------AGCCTTTTGATCGGTGTCG----CCAGATAAGGCAATCGGCATCG---TTAGCGCC------------TTATCGCT----------CTATTTATTGTTTAC----AGTAAA-------------------------------------------CATTTTATGATA--GCT--ATTT-----------TTGTTGTGTTT--------TC-AAAAAAA-AC----T----ATATGCTTTA-TG--TTTG-CTTATCTGCC--GTTTCAGTGTTCAATAAGGAATTCCCGGCCCGCAGTTGTTTCCAGGTGGCCAAATTASizeHit CountTotal NormTotal
No Reads
droFic1
CTTGAAGGATCTTAACGATTTTGGAGCTGTCAATGAGGTCTACAAGAAGGGTAAGT-ACTA--TATC--------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------------AAAAAA----GACTTTTG-------T-TTTTAAAGTATTTAT-------------------------------------------------------------AGCAAT------TTATAA-TAAACCTTATATAGCAATACCTACTGTA---T--A-CC------GCCCTTTTGATCGCCGTCA----CTTGATAAGCCAATCGGCATCG---TTAGCGCC------------TTATCACT----------CCATTTATTGTTTAC----TGTAAA-------------------------------------------CATTTTATGACAGAGCC--ATACT------GTAGTTGTTGT-TTT--------CC-AAAAA-A-AT----T----ATATGCTTTA-TG--TTTG-CTTATCTGCC--GTTCCAGTGTTCAATAAGGACTTCCCGGCCCGCAGTTGTTTCCAAGTGGCCAAGTTASizeHit CountTotal NormTotal
No Reads
droKik1
CCTGAAGGATCTCAATGATTTTGGGGCCGTCAATGAGGTCTACAAGAAGGGTGAGC-ATA--ATCT---TAGATTTAAA-------------ATAAAAACACCTAAGAACTTAAATATTTTTTAAACATTTTAAACATTGTGTAATGATTTTACCCTCAAATATAA----------------------------------------------------AGCCTAAATTATTTACTATAATACCTTAATAATATTAACAT-----TAA-TTTGG------TTTTATTA-A------------------------------------------------------------------------------------AATTGTAGTCTATATACCATTACCCACTGTAG--TATA-CC------GGCCTTTTGGCCATTGCCG----CCTGATAAGGCAATCGGCATCG---TTGGCACC---------CTCTTATCGAC----------GTCTTTATTGTTTAC----TGTAAA-------------------------------------------CATTTTATGACA--GCT--ATTCTGGTGTTATTT---------TTCCATTATTTC-ATAAA-T-AC----T----ATATGCCTTATTG--TTTGACTTATCATCATTTTTTCAGTGTTCAATAAGGATTTCCCGGCCCGCAGTTGTTTCCAGGTGGCCAAGTTASizeHit CountTotal NormTotal
No Reads
droAna3
CCTGAAGGATCTTAACGACTTTGGAGCTGTCAACGAGGTTTACAAAAAGGGTGAGC-AATA--CGT------------------------------------------------------ACTAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCT-TCAATAAAC--TT-----------------CATAAATATATTAATATCATCATAATA-------------------ATAATGGTTATTTTTA-ACCAATACCTACTGTA---T--A-CC------AGCCTTTGTGGTGTTGCCGTTGATTTGATAAGGCAATCGGCATCG---TT-GCACC------------TTATCGCC----------CAGTTTATTGTTTAC----TGTAAA-------------------------------------------CATTTTATGACA--TTT--T---------------------TTTT--------AC-GAAAAA--A----------ATATGCTTTA-TGTGGTGG-CTTATCTCTA--ATTTCAGTGTTCAATAAGGACTTTCCGGCTCGAAGCTGTTTCCAAGTGGCCAAACTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCGAAGCTGTTTCCAAGTGGC.......2411.001010000
..........................CTGTCAACGAGGTTTACAAAAAGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCTCGAAGCTGTTTCCAAGTGGC.......2511.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGGACTTTCCGGCTCGAAGC.....................2211.001100000
............TAACGACTTTGGAGCTGTCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.....AGGATCTTAACGACTTTGGAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.......GATCTTAACGACTTTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.........................GCTGTCAACGAGGTTTACAAAAAGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.CTGAAGGATCTTAACGACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCTGTTTCCAAGTGGC.......1911.001010000
.............AACGACTTTGGAGCTGTCAACGAGGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAATAAGGACTTTCCGGCTCGA........................2411.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTCCGGCTCGAAGC.....................1811.001010000
...................TTTGGAGCTGTCAACGAGGTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..........CTTAACGACTTTGGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCGAAGCTGTTTCCAAGTGGCC......2511.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTCCGGCTCGAAGCTGTTTC...............2411.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-TGTGGTGG-CTTATCTCTA--ATTTCAG..................................................2611.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAATAAGGACTTTCCGGCTCGAAGC.....................2811.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCGGCTCGAAGCTGTTTCCAAGT..........2711.001100000
....................TTGGAGCTGTCAACGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTCCGGCTCGAAGCTGTTTCC..............2411.001000010
..............................CAACGAGGTTTACAAAAAGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..................CTTTGGAGCTGTCAACGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....AGGATCTTAACGACTTTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGACTTTCCGGCTCGAA.......................1911.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCGAAGCTGTTTCCAAGT..........2111.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGCTCGAAGCTGTTTCC..............2011.001010000
........ATCTTAACGACTTTGGAGCTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.................................CGAGGTTTACAAAAAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18130.081001000
droBip1
TCTCAAGGATCTTAACGACTTTGGAGCTGTCAACGAAGTTTACAAAAAGGGTGAGT-AAA--GTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTA-ATACTA-CCGATAAAT--TT-----------------TATAATTATAGTAACATCATCATAATA-------------------ATAATTGTTATTTTTA-ACCAATACCTACTGTA---T--A-CC------GGCCTTTGTGGCG-TGCCG-----TTGATAAGTCAATCGGCATCG---TT-GCACC------------TTATCGCC----------CTGTTTATTGTTTAC----TGTAAA-------------------------------------------CATTTTATGACA--TTT-------------------------TTT--------AC-GAAAAA--A----------ATATGCTTTA-TG--TC-G-CTTATCTTTA--CTTTCAGTGTTCAATAAGGACTTCCCGGCTCGTAGCTGTTTCCAAGTGGCCAAATTGSizeHit CountTotal NormTotal
No Reads
dp5
CCTGAAAGATCTGAACGACTTTGGTGCTGTCAATGAGGTGTACAAGCGGGGTGAGT-GTA--GTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---T--T-GCGGGGTCTGGCTTTGGGTCGATGCCG----CTTGATAAGGCAATCGG-ACCG---G-AGCGCC------------TTATCAGCGTCTATATGTGTGTTTATTCTCTGC----TGTAAA-------------------------------------------C-CTTTACGACT--ACT-------CGTATTATTCT---------------------------------------------CATTA-TG--TTTG-CTTATCTATC--TCCGTAGTGTTCAATAAGGACTTTCCGGCCCGCAGCTGTTTCCAGGTGGCCAAGCTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........CTGAACGACTTTGGTGCTGTCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..................................................GTGAGT-GTA--GTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---T--T-GC....................................................................................................................................................................................................................................................................................................................................1811.0010000010000
..................CTTTGGTGCTGTCAATGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAATAAGGACTTTCCGGCC...........................2211.0010100000000
...............CGACTTTGGTGCTGTCAATGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTTCCAGGTGGCCAAG...2011.0010100000000
droPer2
CCTGAAAGATCTGAACGACTTTGGTGCTGTCAATGAGGTGTACAAGCGGGGTGAGT-GTA--GTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---T--T-GCGGGGTCTGGCTTTGGGTCGATGCCG----CTTGATAAGGCAATCGG-ACCG---G-AGCGCC------------TTATCGGCGTCTATATGTGTGTTTATTCTCTGC----TGTAAA-------------------------------------------C-CTTTACGACT--ACT-------CGTATTATTCT---------------------------------------------CATTA-TG--CTTG-CTTATCTATC--TCCGTAGTGTTCAATAAGGACTTTCCGGCCCGCAGCTGTTTCCAGGTGGCCAAGCTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........CTGAACGACTTTGGTGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003300000
..............ACGACTTTGGTGCTGTCAATGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000002
........ATCTGAACGACTTTGGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
...GAAAGATCTGAACGACTTTGGTGCTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
...GAAAGATCTGAACGACTTTGGTGCTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...................TTTGGTGCTGTCAATGAGGTGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
....AAAGATCTGAACGACTTTGGTGCTGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.CTGAAAGATCTGAACGACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
.........................GCTGTCAATGAGGTGTACAAGCGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
droWil2
CCTTAAGGATCTTAATGATTTTGGAGCCGTCAATGAGGTGTACAAGCAAGGTGGGT-AGA--ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC-ATTTCATTAG--CGCG------GGCCCCTTGACTG-----------ATGATAAGGGAATCGGCATCGGTTTTTGGACC------------TTATCACA----------A-----------CAC----AATAAACATTATACTTTTATTATTAGAGC-TC--------AATTATAAAA--T-----------TAATTT-GTT----------------------------------------------------TTGCTC---TG--TTTG-TT-------T--TTTGCAGTGTTTAATAAGGATTTTCCAGCACGCAGCTGTTTCCAAGTGGCCAAATTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........TCTTAATGATTTTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.00420020
..........CTTAATGATTTTGGAGCCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200110
..........CTTAATGATTTTGGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..................TTTTGGAGCCGTCAATGAGGTGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
....................TTGGAGCCGTCAATGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
..............ATGATTTTGGAGCCGTCAATGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
................GATTTTGGAGCCGTCAATGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..............................CAATGAGGTGTACAAGCAAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.............AATGATTTTGGAGCCGTCAATGAGGTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAGGATTTTCCAGCACGC........................2111.00100010
.................................TGAGGTGTACAAGCAAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..........CTTAATGATTTTGGAGCCGTCAATGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TG-----------ATGATAAGGGAATCGGCATCGG................................................................................................................................................................................................................................................................................2411.00101000
.........TCTTAATGATTTTGGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...................TTTGGAGCCGTCAATGAGGTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...............................AATGAGGTGTACAAGCAAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.CTTAAGGATCTTAATGATTTTGGAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
............................GTCAATGAGGTGTACAAGCAAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAGCTGTTTCCAAGTGGC.......2111.00100010
................GATTTTGGAGCCGTCAATGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
..................TTTTGGAGCCGTCAATGAGGTGTACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
..TTAAGGATCTTAATGATTTTGGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
droVir3
CTTGAAAGATCTGAACGACTTTGGTGCGGTCAACGAGGTGTACAAGCGGGGTGAGC-ATT----C----------------------------------------------CAATAGCTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATACAAGTGCCA-----ACGATAAGGCAG-CGGCATCTG--CT---GGCTTATCAGGCG----------------------------------T----------------------ACTAAGCAC--------------------AAC-ATTTACGATT---CAACTT-ATC-T--------------------------------------------------G--------TG------------CTC-T--TTTTCAGTGTTCAATAAGGACTTTCCGGCACGCAGCTGCTTCCAGGTGGCCAAGCTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................CAACGAGGTGTACAAGCGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.004000200000100000000000000000000010000000000000000000000000000000
...................TTTGGTGCGGTCAACGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTTCCAGGTGGCCAAGCT.2111.001000000000000000000000000000001000000000000000000000000000000000
...................TTTGGTGCGGTCAACGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000100000000000000000000000000000000000000
..........................CGGTCAACGAGGTGTACAAGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAGGACTTTCCGGCACGC........................2111.001000000000000000000001000000000000000000000000000000000000000000
................GACTTTGGTGCGGTCAACGAGGTGTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000100000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCGGCACGCAGCTGCTTCCAGGT..........2711.001001000000000000000000000000000000000000000000000000000000000000
................GACTTTGGTGCGGTCAACGAGGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000001000000000000000000000000000000000000000000000000000000
.....................................GTGTACAAGCGGGGTGAGC-ATT----C----------------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGGTGGCCAAGC..1711.001000000000000000000000000000000000000000000000000000000000000100
.......GATCTGAACGACTTTGGTGCGGTCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGCAGCTGCTTCCAGGT..........2011.001000000000000000000000000000000010000000000000000000000000000000
droMoj3
TCTTAAAGATCTGAATGACTTTGGTGCGGTCAACGATGTGTACAAACGAGGTGAGC-AGT----C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--A-AT------TGGTTTTATATTGTTTTTG-----CCGATAAGCCA-GCGGCATCT-----GTCGTC------------TTATCAAA----------TTTCCAATTGACGAC---------------------------GAGAGCAATAAAAACATAATCGATAACAT------------------------------------------------------------------------------------------------TTTGCG--GTTACAGTGTTCAACAAGGACTTTCCAGCACGCAGCTGCTTCCAGGTGGCCAAGCTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................GGTCAACGATGTGTACAAACGAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGGACTTTCCAGCACGCAGCT....................2511.001100000
.....................TGGTGCGGTCAACGATGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100
..........CTGAATGACTTTGGTGCGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............GAATGACTTTGGTGCGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
droGri2
CTTGAAAGATCTCAACGACTTTGGTGCGGTCAACGAAGTGTACAAACGAGGTAAAC-AGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAATTTACAATTGCCG-----CCGATAAGGCA-TCGGCATCTG--CT---GGCTTATCAGCCG--TCATGGCA----------A-----------CAC----TTCTAATATAAGAACTTTACTACGCAAACAAC--------AATCGTAAACA-TTTACGATG---CG--ATTGCGACG-----------------------------A-----------------------AC---TG------------CTCTC--TTTGCAGTGTTCAATAAGGATTTCCCTGCCCGTAGCTGCTTCCAGGTGGCCAAACTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAGGCA-TCGGCATCC.................................................................................................................................................................................................................................................................................18310.3331238
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATTTCCCTGCCCGTAGCT....................2112.00211
...................TTTGGTGCGGTCAACGAAGTGTACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGGTGGCCAAACTG1911.00110
....AAAGATCTCAACGACTTTGGTGCGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATAAGGATTTCCCTGCCC..........................2011.00110
............................GTCAACGAAGTGTACAAACGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
....AAAGATCTCAACGACTTTGGTGCGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTGCCCGTAGCTGCTTCC..............2111.00101
.......................GTGCGGTCAACGAAGTGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101
..............ACGACTTTGGTGCGGTCAACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACA-TTTACGATG---CG--ATTGCGACG-----------------------------A-----------------------T..................................................................................2711.00110
................GACTTTGGTGCGGTCAACGAAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCCGTAGCTGCTTCCAGGTGGCC......2611.00110
............CAACGACTTTGGTGCGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
..............................CAACGAAGTGTACAAACGAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101
..............ACGACTTTGGTGCGGTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
...........................GGTCAACGAAGTGTACAAACGAGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101
.....................TGGTGCGGTCAACGAAGTGTACAAACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101
....................TTGGTGCGGTCAACGAAGTGTACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101

Generated: 05/18/2015 at 10:43 PM