ID:

dsi_30605

 Coordinate:

3r:11301930-11302079 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.5 -7.3 -7.2 -6.9

Flybase annnotation

five_prime_UTR [3r_11301591_11301929_-]; exon [3r_11301591_11301929_-]; intron [3r_11301930_11302621_-]

No Repeatable elements found

mature
  1. 2l:16035909-16035926 -
  2. dsi_30605  3r:11302027-11302044 -
  3. node_3857:143-160 -
  4. node_189:70-87 +
star

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATTCCAATTAAGTGTTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCTCTCTCCCTCTCTTTCCTCGGCACACACACATACACACTGCGCTCTTTAATCGCGCCGCTCTCTTCGCGCTCTTTTTATTTGTTTATTTTGATTGTTGTTATATATATTCTAATTTACCGTTTTTACAATCGTCTTTAGCTTAAGCAAAACCGCCGCCCAGCAACAACAAGAAATCCACTTAATGAGTG
*************************************************************************************.......((..............(((((((((..........))))....................)))))...............))***************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 O001
Testis
 O002
Head
 M024
male body		 M025
embryo
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
.....................................................................................ACACACATACACACTGCG................................................................................................................................................... 18 0 4 3.50 14 0 14 0 0 0 0 0 0 0
...................................................................................................................................................................................CGTTTTTACAATCGTCTTTAGCT................................................ 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0
............................................................................CCTCGGCACACACACATACACACTG..................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................CTCTCTCCCTCTCTTTCCTCGGC....................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................TTTTTACAATCGTCTTTAGCG................................................ 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................TAAGCAAAACCGCCGCCCAGCAAC........................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................TTGTTGTTATATATATTCTA............................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................TTAAGCAAAACCGCCGCCCAGC........................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0
....................................................................................CACACACATACACACTGCGC.................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
........................GTGCAATTGGCATGATTTGTTG............................................................................................................................................................................................................ 22 3 3 0.33 1 0 0 0 0 0 0 1 0 0
................................................................................TGCACACACACATACACACTG..................................................................................................................................................... 21 1 10 0.30 3 3 0 0 0 0 0 0 0 0
..................................................................................CACACACACATACACACTG..................................................................................................................................................... 19 0 9 0.22 2 2 0 0 0 0 0 0 0 0
..................................................................................TACACACACATACACACTG..................................................................................................................................................... 19 1 20 0.15 3 0 0 0 3 0 0 0 0 0
...................................................................................ACACACACATACACACTG..................................................................................................................................................... 18 0 9 0.11 1 1 0 0 0 0 0 0 0 0
.......................................................................TCTTTCCTCGGCACC.................................................................................................................................................................... 15 1 10 0.10 1 0 0 0 0 0 0 0 1 0
...............................................CCTGACGTGATGGCTCTAT........................................................................................................................................................................................ 19 3 13 0.08 1 0 0 0 0 0 0 0 0 1
......................................................................................................................................TTTTATTTGTTTCTTGTGA................................................................................................. 19 2 20 0.05 1 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

TAAGGTTAATTCACAACACACACGCAGGTTAACCGTACTTAACTACTGCACTGCACTAGCGAGAGAGGGAGAGAAAGGAGCCGTGTGTGTGTATGTGTGACGCGAGAAATTAGCGCGGCGAGAGAAGCGCGAGAAAAATAAACAAATAAAACTAACAACAATATATATAAGATTAAATGGCAAAAATGTTAGCAGAAATCGAATTCGTTTTGGCGGCGGGTCGTTGTTGTTCTTTAGGTGAATTACTCAC
*****************************************************************************.......((..............(((((((((..........))))....................)))))...............))************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR618934
dsim w501 ovaries
 O002
Head
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
.....................................................................................TGTGTGTATGTGTGACGC................................................................................................................................................... 18 0 4 3.75 15 14 1 0 0 0 0
...................................................................................TGTGTGTGTATGTGTGACG.................................................................................................................................................... 19 0 5 3.20 16 15 1 0 0 0 0
....................................................................................GTGTGTGTATGTGTGACG.................................................................................................................................................... 18 0 5 3.00 15 15 0 0 0 0 0
...................................................................................TGTGTGTGTATGTGTGAC..................................................................................................................................................... 18 0 9 2.11 19 19 0 0 0 0 0
.................................................................................CGTGTGTGTGTATGTGTGACGC................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
...................................................................................TGTGTGTGTATGTGTGACGCG.................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0
............................................................................................................................................................................................................TCGTTTTGGGGGTGGGCCGTT......................... 21 3 1 1.00 1 0 0 0 1 0 0
..................................................................................GTGTGTGTGTATGTGTGACGC................................................................................................................................................... 21 0 4 0.50 2 0 2 0 0 0 0
...............................................GTACTGCACTAGCGA............................................................................................................................................................................................ 15 1 4 0.25 1 0 0 0 0 1 0
..................................................................................GTGTGTGTGTATGTGTGA...................................................................................................................................................... 18 0 20 0.10 2 0 2 0 0 0 0
..................................................................................TTGTGTGTGTATGTGTGAC..................................................................................................................................................... 19 1 20 0.10 2 0 2 0 0 0 0
............................................................................................................................................................................................................................TCGTTGTTGTACATTAGG............ 18 2 11 0.09 1 0 0 0 0 0 1
...................................................................................................ACACGAGAAATAAGCGCG..................................................................................................................................... 18 2 11 0.09 1 0 1 0 0 0 0
................................................................................................................GCGCGGAGAGAGAAG........................................................................................................................... 15 1 14 0.07 1 0 1 0 0 0 0
....................................................................................GTGTGTGTATGTGTGA...................................................................................................................................................... 16 0 20 0.05 1 0 1 0 0 0 0
.................................................ACTGCACTACCGAGATGG....................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 1 0
....................................................................................................................................................................................................................GCGGCGGGACGTTGT....................... 15 1 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:11301880-11302129 - dsi_30605 ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCT-CT-------------------CTCC--CT--------------------------------------CTCTTT-C------CTCGGCACACACACATA-------CAC----------------------------------AC-----------------TGCGCTC------------TTTAATCGCGCCG-----------------------CTCTCTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTGATTGTTG--TTATAT------------------ATA-----TT--CTAATTTACCGT-TTT-TACAAT---------------CGTCTTTAGCTTAAGCAAAA----------CCGCCGCCCAGCAA------CAACAA---------------------------GAA--------A-T----CCA-CTT-AA-----TGA--------------------------------------------------------------------G--TG
droSec2 scaffold_0:12132221-12132437 - ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCT-CT----------------CTTCGCTC----------------------------------TCTCCCTCTCTTT-C------TTCGACACACACACATA-------CAC----------------------------------AC-----------------TGCGCTC------------TTTAATCGCGCCG-----------------------CTCTCTTCACGCTATTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTGATTGTTG--TAATAT------------------ATA-----TT--GTAATTTACCGT-TTT-TACAAT---------------CGTCTTTAGCTTAAGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3R:9883250-9883514 + ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCT-CT----------------CTTCGCTC----------------------------------TCTCCCTCTCTTT-C------TTCGGCACACACACATA-----CACAC----------------------------------AC-----------------TACGCTC------------TTTAATCGCGCCG-----------------------CTCTCTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTGATTGTTG--TTATAT---A-------------TATA-----TT--CTAATTTACCGT-TTT-TACAAT---------------CGTCTTTAGCTTAAGCAAAA----------CCGCCGCCCAGCAA------CAACAA---------------------------GAA--------A-C----CCA-TTT-AA-----TGAG----------------------------------------------------------------T--G--TG
droEre2 scaffold_4770:9424044-9424294 + ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCT-CT-----------------------------------------CT-----TCG---------------------------------CACACATAC---ACA--CACACA---GCACACAT----------------------AC-----------------TACGCTC------------TTTAATCGCGCCG-----------------------CTCTCTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTGATTGTTG--TTATAT---AC-----------GTATA-----TT--CTAATTTACCGT-TTT-TACAAT---------------CGTCTTTAGCTTAAGCAAAA----------CCGCCGCCCAGCAA------CAACAAC------------------------AA-------------C----CCA-CTT-AA-----TGA--------------------------------------------------------------------G--TG
droYak3 3R:16548984-16549246 - ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTG--------ACGTGATCGCT-CT----------------CTGCGCTC----------------------------------TCTCTCTCTCTCT-CTCCTTATTCGGCACACACAC---ACAAACACAC----------------------------------AC-----------------TACGCTC------------TTTAATCGCGCCG-----------------------CTCTCTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTGATTGTTG--TTATAT------------------ATA-----TT--CTAATTTACCGT-TTT-TACAAT---------------CGTCTTTAGCTTAAGCAAAA----------CCGCCGCCCAGCAA------CAACAAC---------------------AACAAC------------C----CC--TTT-AT-----TAA--------------------------------------------------------------------G--TG
droEug1 scf7180000409802:60579-60867 - ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCG----------CGG-T-----TTCGCT--CT--------------CT-----TCTCAC----TCACTCTCTCTTTGCTGCTTATTCGGCACACACAT---ACCA------------ATGCATAT---------------------G-----------------TACACTC------------TTTAATCGACTTG-T--------------------GCTCTGTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTTATTGTTG--TTATAT------------------ATA-----TT--CTAATTTACCGT-TTT-TACAAT---------------CATCTTTAGCTTAAGCAAAA---------ACCGCCGCCCAACAA------TAACAAC---------------------AAC---------------------CA-ATT-CT--A--CGAG--------------------------------------------------------------TGTGTG--TG
droBia1 scf7180000302402:2669624-2669917 + ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGCACAATTGGCATGAATTGATGACGTGACGTGATCGCG----------CGGCCCGCTCTCCGCTC--T----C-CGCTGTCCACTCTCTT--------------------------------CGGCACACACACCTA--------------------GCGGGC------------------GG-----------------CCCTCTC------------TTCGACCGTGTCC-----------------------CTCTCTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TCATTTGTT-TATTTTCATTGTTG--CTATAT---A-------------CATA-----TT--CTAATTTAACGT-CTT-TGCCAT---------------CATCTCCAGCTTAAGCAAAAAGCTAGC-AACCGCCGCCCA-CAA------CAACAAC------------------------ATCGCACCTTGCAATCCT-CCCA-GCC-TA-----C----------------------------------------------------------------------G--AG
droTak1 scf7180000415380:773506-773773 + ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCG----------CGG-T-----TTCGCT--CTC-----------------TCTT--------------------------------TGGCACACACAC---ACATAC--------------ATAGAT------------------AG-----------------CACTCTC----------TCTTTAATCGCGCCG-----------------------CTCTCTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTTATTGTTG--TTATAT------------------ATA-----TT--CTAATTTACCAT-TTTCTACAAT---------------CATCA-----TTAAGCAAAA---------ACCGCCGCCCAACAA------TAACAG---------------------------CAGATTTTGTAATCCCTCCCA-GTT-GA-----TCA--------------------------------------------------------------------G--TG
droEle1 scf7180000491047:1277711-1277950 - ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCG----------CGG-T-----TTCGCCCTCTC------------TCTTCTCTT--------------------------------TGGCA---------------------------------------------------------------------------CTCTC------------TTTAATCGCTTCGCT--------------------CCACTCTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATATTTATTGTT-----ATAT---A-------------TATG-----TTTACTAATTTGACGT-TTT-TACAATAT-------------AATCTTTAGCTTAAGCAAAA---------ACCGCCGCCCAATAG------TAACAAC---------------------GACAAC------------C----CCA-A--------------------------------------------------------------------------------------
droRho1 scf7180000771048:1376-1616 - ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCG----------CG--T-----TTCGCCCTCTC------------GCTTCTCTT--------------------------------AAGCA---------------------------------------------------------------------------CTCTC------------TTTAATAGCTTGGCT--------------------CCTCTCTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTTATTGTTG--TCATAT---A-------------TATA-----TTAACTAATTAAACGT-TTT-TACAATAT-------------AATCTTTAGCTTAAGCAAAA----------CCGCCGCCCAATAA------CAACAA---------------------------C------------C----CCA-ATT-TA-------------------------------------------------------------------------------TG
droFic1 scf7180000453912:389626-389880 + ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCG----------CGGCT-----TTCGCT--CT--------------CTTCTCTT--------------------------------CGGCACACACAC---ACA--C--------------ATAGAC------------------AG-----------------TACTCTC------------TTTAATCGCGTGG-----------------------CTCT-TTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTTATTGTTG--TTATAT------------------ATA-----TC--CTAATTTAACGT-TTT-TACCATAT-------------AATCTTTAGCTTAAGCAAAA---------TCCACCGCCCAATAA---------CAA---------------------------GAA--------A-C----CCA-GTT-TA-----T----------------------------------------------------------------------G--TG
droKik1 scf7180000302475:1256820-1257108 - ATTCCAATTAAGTG-----------------------------TAGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGAT-----CGGT-GT----GTTTGGTTC-----TCTTT--CT--------------CT-----TCG----CAC------------GC-ACACT-------------------------------ATT------------------GCG--CCATCGC-CGCTCTCTTT--G------------GTGT------TCCGGCCG-------CGTGTTCGC----------CGCTCTCT---ATCTCTCTTTTGT---------TGTGCTTTTTTATTG-TGT---------------------------------------------------------------------------------------TT-TATTGTTATTCTTG--TCGTAATTTACACCCAT-----TTATA-----AT--ATATATTATT---TTT-TATACA---------------TATACGCAGCTTAAGCAAAACGCCGCAA-AAAATTGTT---------------CA------------------------------------GTAATC----CCA-AA-A--------GT--------------------------------------------------------------------G--TT
droAna3 scaffold_13340:20591080-20591449 - ATTCCAATTAAGT----------------------------------GTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCGT--------T-----T-------ACT--CT--------------CT-----TCGTGCCCAC-----------------------------A--CAC---A----CACACAC----ATACATACATACATAATCGAAAATAAGCCCCC----ACTTTT--GCTCTCTCTC------------TTCGACCG-------CGTGTGTGAA-----------CTCT---------CTTATTTGT---------TGTGCTTTTTTATTG-TGTTTGCT---------------------------------------------------TT--GG-----------------------TGTT-TATTATTATTGTTG--TTATAT-----------------TATAT-GAGTT--CTAATTAGCCTGCTTT--TTTTT--TTTTTATAAAATTTGTCTATAGCTTAAGCAAAA--------AACCGCCGCCCAT-AATAAAGA----AAAAAGAAAAGAAAGAAAAACACCAACAA-ATATCTTGTAATCCC-CCCA-GTT-GG--AAGTGAG----------------------------------------------------------------T--GTTTG
droBip1 scf7180000396413:1810327-1810664 + ATTCCAATTAAGT----------------------------------GTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCGT--------T-----T-------ACT--CT--------------CT-----TCGTGCCCAC-----------------------------A--CAG---A----CACACACCATTAAACATA------------------GGCCCCC----ACTTTT--TCGCTCTCTC------------TTCGACCG-------CGTGTGTGTG-C---------TTCT---------CTTATTTGT---------TGTGCTTTTTTATTG-TGTTTGCT---------------------------------------------------TT--GG-----------------------TGTT-TATTATTATTGTTG--TTATAT-----------------TATAT-GAGTT--CTAATTTGCCTGCTCT--TTTAT--------TAAAATTTGTCTATAGCTTAAGCAAAA---------ACCGCCGCCCAT-AATAAAAA----AAAA--TAAAG--AGAAAAACAACAACAA-AAATCTTGTAATCC---CCA-GCT-GA--AAGT----------------------------------------------------------------------G--AG
dp5 2:13510725-13511029 - ATTCCAATTAAACGGTTGTATGTGTGCGTGTGTGTGTGTGTGTGTGTATGTGCGTCCAATTGGCATGAATTGATGACGTGACGCGATCATGA-TCCAAACA-----C-------ACT--CT--------------------------------------------------------------------------C--------------TTTGAG------------------TGC--TTCTCTTTCAGCC--TCTCTC------------TCTTATCGTTTCG--CGTGTGTGTG----------------------------------------------------------------------------------CCTTTGTGTGTGCTTTTCTCTTCTTTGT-TGTGCTTT--GCTGCTCTCTAGTATTGTTTTTAATTATT-TCTCTTGAATTTGA--TTATA-------------------ATT-----TT--CAAA-----TAT-TTT-TGTAA-------------------ATACAGCTTAAGCAAAA----------CCGCCGCCCAACAAAATACC----------------------------------------------------CA-AA-A--------C--------------------------------------------------------------------------
droPer2 scaffold_0:6938105-6938401 + ATTCCAATTAAACTGTTGTATGTGTGCGAGTGTGTGT------GTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGCGATCATGA-TCCAAACG-----C-------ACT--CT--------------------------------------------------------------------------C--------------TTTGAG------------------TGC--TTCTCTTTCAGC----CTCTC------------TCTTATCGTTTCG--CGTGTGTGTT----------------------------------------------------------------------------------CCTTTGTGTGTGCTTTTCTCTTCTTTGT-TGTACTTT--GCTGCTCTCTAGTATTGTTTTTATTTATT-TCTCTTGAATTTGA--TTGTA-------------------ATT-----TT--CAAG-----TAT-TTT-TGTAA-------------------ATACAGCTTAAGCAAAA----------CCGCCGCCCAACAAAATACC----------------------------------------------------CA-AA-A--------C--------------------------------------------------------------------------
droWil2 scf2_1100000004921:2037767-2037903 + ATTCCAATTAAGTTTTTTTG-----------------------GTGTGTGCGCCTCCAATTGGCATGAATTGATGACGTGACGTGATCGCG----------AAGCTC-----TCTCT--CT--------------------------------------------------------------------------------------------------------------------------------------CTCTCTATCAATGTGTCTTCAAGCTCTTC----------------------CTCTCT---CTCCCTCTCA-----------------------------------------------------------------------------------------------------------------CTATCTGTT-TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12822:535177-535542 - ATTCCAATTAATTT-------------------------------CTGTATGCGTCCAATTGGCATGAATTGGTGACGTGACGCGATCTCG-CG-----CT-----C-------ACT--CTC------------TCTTTT----GTTTCCAC------------TC-CCGCTATTTGGCACCAAT-------------------------------------------------------------------------------------------------------GCGCGCGC-TCTTCATAA-----------AGCTTTTAAACATATTAACATTTATAC---------ATAACTTGCTCTTA---------------------------GA-TT---------------------------------------TTTTTTGTTGTATTTTTATTATTA--TTAT---TCCTTA----AGTAA----ATACAGTT--TTAATTTGTA----------------------------TGCTTATAGCTCAAGCAACA----GC--AGTAGCCGCCCAC-AAAAAACC----AAC---------------------AACAAGTG----------T----ATAAAA-A-CATAAGTGTGTGTTTGTACATAATATACATATGTACATTCTTATCTGTATGCGGAATCGATACACGTAACTGTGTGTG--CG
droMoj3 scaffold_6540:33206546-33206966 - ATTCCAATTAATTT-------------------------------CTGTATGCGTCCAATTGGCATGAATTGGTGACGTGACGCGATCTCGTGT----GCT------------CAC---CTCTCTTTAG------A---------TGCCCAC------------TC-TTCCT-------------------------------ATC------------------GCA--CTGGCTCCCGTTCTCTTT--GCCT--GTCTC------------TCTTTTCGCAA----CGTGCGCGC-TCT-CA--------T---------TTTATACGTATTTACATTTGTAC---------ATAATTTGCTCTTGTTATTGCTCTTGTTTTTGTATGTGTTTGACTTTTTTTTGTTTGTGTTTTCTTCTGCTCC--TGCTTCGTT------------------------TCTTTAT---TCGTTA----AGTAA----A---------------TATCGT-TTT-TAATTTGT------------ATGTTTATAGCTCAAGCAACA----GC--AACAGCCGCCCAC-AAAATACC-AACAAC---------------------AACAAGTG----------C----TTA-ACTTATGCAAGTGTGAGC----AGCTAA-ATACACACATACATACACAT----ATGCT-TATCGATACAT----------GAG--CA
droGri2 scaffold_15074:3245207-3245466 + ATTCCAATTAATTT-------------------------------CTGTATGCGTCCAATTGGCATGAATTGGTGACGTGACGCGATCTCT-CG-----CC-----C-------GCTCTCTC-----------------TCTC--------------------------------TCGCT-------------------------------------------------------C----TCTCTTTT--GCTCTATCTC------------TCTTA--GCAA----AAGGCGTAC-TCTTTAAAA-----------AGCTTTTT----------------------------A-TATTTGCTCT------------------------------------------------------------------------------TGTTGTTTTTTTGTTGTTA--CTAT---TCCCAA----AGTAA----ATACA-GT--TTAATTTGTA----------------------------TGTTTTTAGCTCAAGCAACA----GCAA-AAAGCCGCCCACTAA------AAACAAC------------------AACAA---C------------------AA-AA-A--------CA--------------------------------------------------------------------G--TG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCT-CT-------------------CTCC--CT--------------------------------------CTCTTT-C------CTCGGCACACACACATA-------CAC----------------------------------AC-----------------TGCGCTC------------TTTAATCGCGCCG-----------------------CTCTCTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTGATTGTTG--TTATAT------------------ATA-----TT--CTAATTTACCGT-TTT-TACAAT---------------CGTCTTTAGCTTAAGCAAAA----------CCGCCGCCCAGCAA------CAACAA---------------------------GAA--------A-T----CCA-CTT-AA-----TGA--------------------------------------------------------------------G--TGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................ACACACATA-------CAC----------------------------------AC-----------------TGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1843.5014000014000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGT-TTT-TACAAT---------------CGTCTTTAGCT.....................................................................................................................................................................................2312.00220000000000000000
......................................................................................................................................................................C------CTCGGCACACACACATA-------CAC----------------------------------AC-----------------TG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000000000000000
.........................................................................................CT-CT-------------------CTCC--CT--------------------------------------CTCTTT-C------CTCGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TTT-TACAAT---------------CGTCTTTAGCG.....................................................................................................................................................................................2111.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGCAAAA----------CCGCCGCCCAGCAA------C.............................................................................................................................................2411.00100000100000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTG--TTATAT------------------ATA-----TT--CTA...................................................................................................................................................................................................................................2011.00100000100000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAGCAAAA----------CCGCCGCCCAGC......................................................................................................................................................2211.00100010000000000000
....................................................................................................................................................................................CACACACATA-------CAC----------------------------------AC-----------------TGCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
..................................................................................................................................................................................CACACACACATA-------CAC----------------------------------AC-----------------TG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.22220000000000000000
...................................................................................................................................................................................ACACACACATA-------CAC----------------------------------AC-----------------TG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.11110000000000000000
................................................................................................................................................................TCTTT-C------CTCGGCACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15100.10100000000010000000
droSec2
ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCT-CT----------------CTTCGCTC----------------------------------TCTCCCTCTCTTT-C------TTCGACACACACACATA-------CAC----------------------------------AC-----------------TGCGCTC------------TTTAATCGCGCCG-----------------------CTCTCTTCACGCTATTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTGATTGTTG--TAATAT------------------ATA-----TT--GTAATTTACCGT-TTT-TACAAT---------------CGTCTTTAGCTTAAGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................ATGAATTGATGACGTGACGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
....................................................................ATTGATGACGTGACGTGATCGCT-CT----------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
dm3
ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCT-CT----------------CTTCGCTC----------------------------------TCTCCCTCTCTTT-C------TTCGGCACACACACATA-----CACAC----------------------------------AC-----------------TACGCTC------------TTTAATCGCGCCG-----------------------CTCTCTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTGATTGTTG--TTATAT---A-------------TATA-----TT--CTAATTTACCGT-TTT-TACAAT---------------CGTCTTTAGCTTAAGCAAAA----------CCGCCGCCCAGCAA------CAACAA---------------------------GAA--------A-C----CCA-TTT-AA-----TGAG----------------------------------------------------------------T--G--TGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............TG-----------------------------TTGTGTGTGCGTCCAATTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000002000000000000000000000000000000000000000000000090000000001000000
.........AAGTG-----------------------------TTGTGTGTGCGTCCAATTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000
.....AATTAAGTG-----------------------------TTGTGTGTGCGTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TCCCTCTCTTT-C------TTCGGCACACAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TG-----------------------------TTGTGTGTGCGTCCAATTGGCATGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000010000000000000000
..........................................................................................................................................................................................................................................AC-----------------TACGCTC------------TTTAATCGCGCCG-----------------------CT....................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GCATGAATTGATGACGTGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000
........TAAGTG-----------------------------TTGTGTGTGCGTCCAATTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000
.............G-----------------------------TTGTGTGTGCGTCCAATTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.....AATTAAGTG-----------------------------TTGTGTGTGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000
...............................................................CATGAATTGATGACGTGACGTGATCGCT-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
.......TTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------CAACAA---------------------------GAA--------A-C----CCA-TTT-AA-----TGAG----------------------------------------------------------------T--G--T.2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CAATTAAGTG-----------------------------TTGTGTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.............................................GTGTGTGCGTCCAATTGGCATGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................ATGACGTGACGTGATCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.....................................................................TTGATGACGTGACGTGATCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TC----------------------------------TCTCCCTCTCTTT-C------TTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AAGTG-----------------------------TTGTGTGTGCGTCCAATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TG-----------------------------TTGTGTGTGCGTCCAATTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
....................................................................ATTGATGACGTGACGTGATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
...CCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............................................................................................................................................................TCTCTTT-C------TTCGGCACACACACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............G-----------------------------TTGTGTGTGCGTCCAATTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................C------TTCGGCACACACACATA-----.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GTGTGCGTCCAATTGGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................GATGACGTGACGTGATCGCT-CT----------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............G-----------------------------TTGTGTGTGCGTCCAATTGGCATGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
............................................TGTGTGTGCGTCCAATTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------CCGCCGCCCAGCAA------CAACAA---------------------------GAA--------..................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TTTAATCGCGCCG-----------------------CTCTCTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....CAATTAAGTG-----------------------------TTGTGTGTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
................................................................ATGAATTGATGACGTGACGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-TTT-TACAAT---------------CGTCTTTAGCTT....................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................................................ATTGATGACGTGACGTGATCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......ATTAAGTG-----------------------------TTGTGTGTGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..........................................................ATTGGCATGAATTGATGACGTGACGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
........................................................................................................................................................................................................................................................................................................................CTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTG.............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTAAGCAAAA----------CCGCCGCCCA........................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............G-----------------------------TTGTGTGTGCGTCCAATTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TAAGTG-----------------------------TTGTGTGTGCGTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........................................................................................................................................................TCCCTCTCTTT-C------TTCGGCACACACACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA----------CCGCCGCCCAGCAA------CAAC..........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TGAATTGATGACGTGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
...........................................................TTGGCATGAATTGATGACGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..TCCAATTAAGTG-----------------------------TTGTGTGTGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............TG-----------------------------TTGTGTGTGCGTCCAATTGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..................................................TGCGTCCAATTGGCATGAATTGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................................................................GATGACGTGACGTGATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATA-----TT--CTAATTTACCGT-TTT-.....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---A-------------TATA-----TT--CTAATTTACCGT-TTT-TACAAT---------------................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CAATTAAGTG-----------------------------TTGTGTGTGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
....................................................................ATTGATGACGTGACGTGATCGCT-CT----------------CT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATTTACCGT-TTT-TACAAT---------------C...............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GTGTGCGTCCAATTGGCATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................TGGCATGAATTGATGACGTGACGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCCAATTAAGTG-----------------------------TTGTGTGTGCGTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................C------------TTTAATCGCGCCG-----------------------CTCTCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GCATGAATTGATGACGTGACGTGATCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTCCAATTAAGTG-----------------------------TTGTGTGTGCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................ATGAATTGATGACGTGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................................................................................................................................................................................................................................................TACGCTC------------TTTAATCGCGCCG-----------------------CTCTC.................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GTG-----------------------------TTGTGTGTGCGTCCAATTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...............................................................................................................................................................................................................................................................CGCTC------------TTTAATCGCGCCG-----------------------CTCTCTTCGCGCTC........................................................................................................................................................................................................................................................................................................................................................................................................................3211.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTAAGTG-----------------------------TTGTGTGTGCGTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.................................................................TGAATTGATGACGTGACGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-TTT-TACAAT---------------CGTCTTTAG.......................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................AATTGATGACGTGACGTGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------------GAA--------A-C----CCA-TTT-AA-----TGA.........................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................CCCTCTCTTT-C------TTCGGCACACACACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA---------------------------GAA--------A-C----CCA-TTT-AA-----TGAG----------------------------------------------------------------T--G--T.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCCAATTAAGTG-----------------------------TTGTGTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..........AGTG-----------------------------TTGTGTGTGCGTCCAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........AAGTG-----------------------------TTGTGTGTGCGTCCAATTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
......................................................................................................................................................................................CACACATA-----CACAC----------------------------------AC-----------------TACGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................ACACATA-----CACAC----------------------------------AC-----------------TACGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................ATGAATTGATGACGTGACGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................................................CATGAATTGATGACGTGACGTGATCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......................................................................TGATGACGTGACGTGATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................................................CCAATTGGCATGAATTGATGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................C------TTCGGCACACACACATA-----CAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-TATTTTGATTGTTG--TTATAT---A-------------TATA-----T.........................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................T-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTGATTGTT.............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........AGTG-----------------------------TTGTGTGTGCGTCCAATTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......................................................................................................................................................................................................................................................................................................................CTCTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TT..................................................................................................................................................................................................................................................................................................1730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCT-CT-----------------------------------------CT-----TCG---------------------------------CACACATAC---ACA--CACACA---GCACACAT----------------------AC-----------------TACGCTC------------TTTAATCGCGCCG-----------------------CTCTCTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTGATTGTTG--TTATAT---AC-----------GTATA-----TT--CTAATTTACCGT-TTT-TACAAT---------------CGTCTTTAGCTTAAGCAAAA----------CCGCCGCCCAGCAA------CAACAAC------------------------AA-------------C----CCA-CTT-AA-----TGA--------------------------------------------------------------------G--TGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................AATTGGCATGAATTGATGACGTGACGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
............................................................................................CT-----------------------------------------CT-----TCG---------------------------------CACACATAC---ACA--CACACA---GCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-TTT-TACAAT---------------CGTCTTTAGCT.....................................................................................................................................................................................2211.0011000000
...........................................................................................................................................................................................................................................C-----------------TACGCTC------------TTTAATCGCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTT-TATTTTGATTGTTG--TTAT......................................................................................................................................................................................................................................................................2511.0010000010
droYak3
ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTG--------ACGTGATCGCT-CT----------------CTGCGCTC----------------------------------TCTCTCTCTCTCT-CTCCTTATTCGGCACACACAC---ACAAACACAC----------------------------------AC-----------------TACGCTC------------TTTAATCGCGCCG-----------------------CTCTCTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTGATTGTTG--TTATAT------------------ATA-----TT--CTAATTTACCGT-TTT-TACAAT---------------CGTCTTTAGCTTAAGCAAAA----------CCGCCGCCCAGCAA------CAACAAC---------------------AACAAC------------C----CC--TTT-AT-----TAA--------------------------------------------------------------------G--TGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................TTG--------ACGTGATCGCT-CT----------------CTGCGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
..................................................................GAATTG--------ACGTGATCGCT-CT----------------CTGCGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.....................................................GTCCAATTGGCATGAATTG--------AC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
....................................................................................GATCGCT-CT----------------CTGCGCTC----------------------------------TCTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-TTT-TACAAT---------------CGTCTTTAG.......................................................................................................................................................................................2011.00101000000000
................................................................ATGAATTG--------ACGTGATCGCT-CT----------------CTGCGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
ATTCCAATTAAGTG-----------------------------TTGTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.............G-----------------------------TTGTGTGTGCGTCCAATTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.....AATTAAGTG-----------------------------TTGTGTGTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTAAGCAAAA----------CCGCCGCCCAGC......................................................................................................................................................2411.00101000000000
................................................................................................................................................................................................................................................................GCTC------------TTTAATCGCGCCG-----------------------CT....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
...CCAATTAAGTG-----------------------------TTGTGTGTGCGTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
........................................................................................................................................................TCTCTCTCTCTCT-CTCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18120.08101000000000
droEug1
ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCG----------CGG-T-----TTCGCT--CT--------------CT-----TCTCAC----TCACTCTCTCTTTGCTGCTTATTCGGCACACACAT---ACCA------------ATGCATAT---------------------G-----------------TACACTC------------TTTAATCGACTTG-T--------------------GCTCTGTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTTATTGTTG--TTATAT------------------ATA-----TT--CTAATTTACCGT-TTT-TACAAT---------------CATCTTTAGCTTAAGCAAAA---------ACCGCCGCCCAACAA------TAACAAC---------------------AAC---------------------CA-ATT-CT--A--CGAG--------------------------------------------------------------TGTGTG--TGSizeHit CountTotal NormTotal
No Reads
droBia1
ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGCACAATTGGCATGAATTGATGACGTGACGTGATCGCG----------CGGCCCGCTCTCCGCTC--T----C-CGCTGTCCACTCTCTT--------------------------------CGGCACACACACCTA--------------------GCGGGC------------------GG-----------------CCCTCTC------------TTCGACCGTGTCC-----------------------CTCTCTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TCATTTGTT-TATTTTCATTGTTG--CTATAT---A-------------CATA-----TT--CTAATTTAACGT-CTT-TGCCAT---------------CATCTCCAGCTTAAGCAAAAAGCTAGC-AACCGCCGCCCA-CAA------CAACAAC------------------------ATCGCACCTTGCAATCCT-CCCA-GCC-TA-----C----------------------------------------------------------------------G--AGSizeHit CountTotal NormTotal
No Reads
droTak1
ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCG----------CGG-T-----TTCGCT--CTC-----------------TCTT--------------------------------TGGCACACACAC---ACATAC--------------ATAGAT------------------AG-----------------CACTCTC----------TCTTTAATCGCGCCG-----------------------CTCTCTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTTATTGTTG--TTATAT------------------ATA-----TT--CTAATTTACCAT-TTTCTACAAT---------------CATCA-----TTAAGCAAAA---------ACCGCCGCCCAACAA------TAACAG---------------------------CAGATTTTGTAATCCCTCCCA-GTT-GA-----TCA--------------------------------------------------------------------G--TGSizeHit CountTotal NormTotal
No Reads
droEle1
ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCG----------CGG-T-----TTCGCCCTCTC------------TCTTCTCTT--------------------------------TGGCA---------------------------------------------------------------------------CTCTC------------TTTAATCGCTTCGCT--------------------CCACTCTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATATTTATTGTT-----ATAT---A-------------TATG-----TTTACTAATTTGACGT-TTT-TACAATAT-------------AATCTTTAGCTTAAGCAAAA---------ACCGCCGCCCAATAG------TAACAAC---------------------GACAAC------------C----CCA-A--------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCG----------CG--T-----TTCGCCCTCTC------------GCTTCTCTT--------------------------------AAGCA---------------------------------------------------------------------------CTCTC------------TTTAATAGCTTGGCT--------------------CCTCTCTTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTTATTGTTG--TCATAT---A-------------TATA-----TTAACTAATTAAACGT-TTT-TACAATAT-------------AATCTTTAGCTTAAGCAAAA----------CCGCCGCCCAATAA------CAACAA---------------------------C------------C----CCA-ATT-TA-------------------------------------------------------------------------------TGSizeHit CountTotal NormTotal
No Reads
droFic1
ATTCCAATTAAGTG-----------------------------TTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCG----------CGGCT-----TTCGCT--CT--------------CTTCTCTT--------------------------------CGGCACACACAC---ACA--C--------------ATAGAC------------------AG-----------------TACTCTC------------TTTAATCGCGTGG-----------------------CTCT-TTCGCGCTCTTT-----------------------------------------------------------------------------------------------------------------TTATTTGTT-TATTTTTATTGTTG--TTATAT------------------ATA-----TC--CTAATTTAACGT-TTT-TACCATAT-------------AATCTTTAGCTTAAGCAAAA---------TCCACCGCCCAATAA---------CAA---------------------------GAA--------A-C----CCA-GTT-TA-----T----------------------------------------------------------------------G--TGSizeHit CountTotal NormTotal
No Reads
droKik1
ATTCCAATTAAGTG-----------------------------TAGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGAT-----CGGT-GT----GTTTGGTTC-----TCTTT--CT--------------CT-----TCG----CAC------------GC-ACACT-------------------------------ATT------------------GCG--CCATCGC-CGCTCTCTTT--G------------GTGT------TCCGGCCG-------CGTGTTCGC----------CGCTCTCT---ATCTCTCTTTTGT---------TGTGCTTTTTTATTG-TGT---------------------------------------------------------------------------------------TT-TATTGTTATTCTTG--TCGTAATTTACACCCAT-----TTATA-----AT--ATATATTATT---TTT-TATACA---------------TATACGCAGCTTAAGCAAAACGCCGCAA-AAAATTGTT---------------CA------------------------------------GTAATC----CCA-AA-A--------GT--------------------------------------------------------------------G--TTSizeHit CountTotal NormTotal
No Reads
droAna3
ATTCCAATTAAGT----------------------------------GTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCGT--------T-----T-------ACT--CT--------------CT-----TCGTGCCCAC-----------------------------A--CAC---A----CACACAC----ATACATACATACATAATCGAAAATAAGCCCCC----ACTTTT--GCTCTCTCTC------------TTCGACCG-------CGTGTGTGAA-----------CTCT---------CTTATTTGT---------TGTGCTTTTTTATTG-TGTTTGCT---------------------------------------------------TT--GG-----------------------TGTT-TATTATTATTGTTG--TTATAT-----------------TATAT-GAGTT--CTAATTAGCCTGCTTT--TTTTT--TTTTTATAAAATTTGTCTATAGCTTAAGCAAAA--------AACCGCCGCCCAT-AATAAAGA----AAAAAGAAAAGAAAGAAAAACACCAACAA-ATATCTTGTAATCCC-CCCA-GTT-GG--AAGTGAG----------------------------------------------------------------T--GTTTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................................................................TTATTG-TGTTTGCT---------------------------------------------------TT--GG-----------------------TGT............................................................................................................................................................................................................................................................................................2111.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAAAGAAAGAAAAAC.....................................................................................................................1821.002002000
..................................................TGCGTCCAATTGGCATGAATTGATGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA----AAAAAGAAAAGAAAGA..........................................................................................................................1811.001010000
.................................................GTGCGTCCAATTGGCATGAATTGATGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.......................................................................GATGACGTGACGTGATCGCGT--------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
............................................................................................................................................................................................................................................................TCTCTCTC------------TTCGACCG-------CGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAAAACACCAACAA-ATATCTT.....................................................................................................2411.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGA----AAAAAGAAAAGAAAGA..........................................................................................................................2011.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAAA--------AACCGCCGCCCAT-......................................................................................................................................................2011.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAGA----AAAAAGAAAAGA..............................................................................................................................1920.501010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGAAAAGAAAGAAAAA......................................................................................................................2040.251010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGA----AAAAAGAAAAGAA.............................................................................................................................1870.141000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAAAAGAAAGAAAAA......................................................................................................................1980.131010000
droBip1
ATTCCAATTAAGT----------------------------------GTGTGCGTCCAATTGGCATGAATTGATGACGTGACGTGATCGCGT--------T-----T-------ACT--CT--------------CT-----TCGTGCCCAC-----------------------------A--CAG---A----CACACACCATTAAACATA------------------GGCCCCC----ACTTTT--TCGCTCTCTC------------TTCGACCG-------CGTGTGTGTG-C---------TTCT---------CTTATTTGT---------TGTGCTTTTTTATTG-TGTTTGCT---------------------------------------------------TT--GG-----------------------TGTT-TATTATTATTGTTG--TTATAT-----------------TATAT-GAGTT--CTAATTTGCCTGCTCT--TTTAT--------TAAAATTTGTCTATAGCTTAAGCAAAA---------ACCGCCGCCCAT-AATAAAAA----AAAA--TAAAG--AGAAAAACAACAACAA-AAATCTTGTAATCC---CCA-GCT-GA--AAGT----------------------------------------------------------------------G--AGSizeHit CountTotal NormTotal
No Reads
dp5
ATTCCAATTAAACGGTTGTATGTGTGCGTGTGTGTGTGTGTGTGTGTATGTGCGTCCAATTGGCATGAATTGATGACGTGACGCGATCATGA-TCCAAACA-----C-------ACT--CT--------------------------------------------------------------------------C--------------TTTGAG------------------TGC--TTCTCTTTCAGCC--TCTCTC------------TCTTATCGTTTCG--CGTGTGTGTG----------------------------------------------------------------------------------CCTTTGTGTGTGCTTTTCTCTTCTTTGT-TGTGCTTT--GCTGCTCTCTAGTATTGTTTTTAATTATT-TCTCTTGAATTTGA--TTATA-------------------ATT-----TT--CAAA-----TAT-TTT-TGTAA-------------------ATACAGCTTAAGCAAAA----------CCGCCGCCCAACAAAATACC----------------------------------------------------CA-AA-A--------C--------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-TTT-TGTAA-------------------ATACAGCTTAAG.................................................................................................................................................................................2211.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAAGCAAAA----------CCGCCGCCCA........................................................................................................................................................2111.0010001000000
....................TGTGTGCGTGTGTGTGTGTGTGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000010000
droPer2
ATTCCAATTAAACTGTTGTATGTGTGCGAGTGTGTGT------GTGTGTGTGCGTCCAATTGGCATGAATTGATGACGTGACGCGATCATGA-TCCAAACG-----C-------ACT--CT--------------------------------------------------------------------------C--------------TTTGAG------------------TGC--TTCTCTTTCAGC----CTCTC------------TCTTATCGTTTCG--CGTGTGTGTT----------------------------------------------------------------------------------CCTTTGTGTGTGCTTTTCTCTTCTTTGT-TGTACTTT--GCTGCTCTCTAGTATTGTTTTTATTTATT-TCTCTTGAATTTGA--TTGTA-------------------ATT-----TT--CAAG-----TAT-TTT-TGTAA-------------------ATACAGCTTAAGCAAAA----------CCGCCGCCCAACAAAATACC----------------------------------------------------CA-AA-A--------C--------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................................................................................CG--CGTGTGTGTT----------------------------------------------------------------------------------CCTTTGTGT......................................................................................................................................................................................................................................................................................................................................................2111.001000001
.............................................................................GTGACGCGATCATGA-TCCAAACG-----C-------ACT--...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
....................................................................ATTGATGACGTGACGCGATCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droWil2
ATTCCAATTAAGTTTTTTTG-----------------------GTGTGTGCGCCTCCAATTGGCATGAATTGATGACGTGACGTGATCGCG----------AAGCTC-----TCTCT--CT--------------------------------------------------------------------------------------------------------------------------------------CTCTCTATCAATGTGTCTTCAAGCTCTTC----------------------CTCTCT---CTCCCTCTCA-----------------------------------------------------------------------------------------------------------------CTATCTGTT-TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................CAATTGGCATGAATTGATGACGTGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
droVir3
ATTCCAATTAATTT-------------------------------CTGTATGCGTCCAATTGGCATGAATTGGTGACGTGACGCGATCTCG-CG-----CT-----C-------ACT--CTC------------TCTTTT----GTTTCCAC------------TC-CCGCTATTTGGCACCAAT-------------------------------------------------------------------------------------------------------GCGCGCGC-TCTTCATAA-----------AGCTTTTAAACATATTAACATTTATAC---------ATAACTTGCTCTTA---------------------------GA-TT---------------------------------------TTTTTTGTTGTATTTTTATTATTA--TTAT---TCCTTA----AGTAA----ATACAGTT--TTAATTTGTA----------------------------TGCTTATAGCTCAAGCAACA----GC--AGTAGCCGCCCAC-AAAAAACC----AAC---------------------AACAAGTG----------T----ATAAAA-A-CATAAGTGTGTGTTTGTACATAATATACATATGTACATTCTTATCTGTATGCGGAATCGATACACGTAACTGTGTGTG--CGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT---TCCTTA----AGTAA----ATACAGTT--TT....................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
.............................................................GGCATGAATTGGTGACGTGACGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000100000000000000000000000000000000000000000000
..................................................................GAATTGGTGACGTGACGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-AAAAAACC----AAC---------------------AACAAGTG----------T----...........................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGCAACA----GC--AGTAGCCGCC..........................................................................................................................................................2211.001000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------------------AACAAGTG----------T----ATAAAA-....................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------AACAAGTG----------T----ATAAAA-A-CATAAGTGTGT.......................................................................2811.001000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAA-A-CATAAGTGTGTGTTT...................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
....................................................................................GATCTCG-CG-----CT-----C-------ACT--CTC------------T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAGCCGCCCAC-AAAAAACC----..........................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-AAAAAACC----AAC---------------------AACAAGTG----------T----...........................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................TAA-----------AGCTTTTAAACATATTAAC..........................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACATAATATACATATGT................................................1920.501001000000000000000000000000000000000000000000000000000000000000
droMoj3
ATTCCAATTAATTT-------------------------------CTGTATGCGTCCAATTGGCATGAATTGGTGACGTGACGCGATCTCGTGT----GCT------------CAC---CTCTCTTTAG------A---------TGCCCAC------------TC-TTCCT-------------------------------ATC------------------GCA--CTGGCTCCCGTTCTCTTT--GCCT--GTCTC------------TCTTTTCGCAA----CGTGCGCGC-TCT-CA--------T---------TTTATACGTATTTACATTTGTAC---------ATAATTTGCTCTTGTTATTGCTCTTGTTTTTGTATGTGTTTGACTTTTTTTTGTTTGTGTTTTCTTCTGCTCC--TGCTTCGTT------------------------TCTTTAT---TCGTTA----AGTAA----A---------------TATCGT-TTT-TAATTTGT------------ATGTTTATAGCTCAAGCAACA----GC--AACAGCCGCCCAC-AAAATACC-AACAAC---------------------AACAAGTG----------C----TTA-ACTTATGCAAGTGTGAGC----AGCTAA-ATACACACATACATACACAT----ATGCT-TATCGATACAT----------GAG--CASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACC-AACAAC---------------------AACAAGTG----------C----T..........................................................................................2011.001000100
...............................................................CATGAATTGGTGACGTGACGCGATCTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................GTTTGACTTTTTTTTGTTTGTGT.............................................................................................................................................................................................................................................................................................................................2311.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACACATACATACACAT----ATGC..............................2311.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCAAGCAACA----GC--AACAGCCGCCCAC-A.....................................................................................................................................................2911.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------------------AACAAGTG----------C----TTA-ACTTATGCAAGTGT.........................................................................2911.001000001
droGri2
ATTCCAATTAATTT-------------------------------CTGTATGCGTCCAATTGGCATGAATTGGTGACGTGACGCGATCTCT-CG-----CC-----C-------GCTCTCTC-----------------TCTC--------------------------------TCGCT-------------------------------------------------------C----TCTCTTTT--GCTCTATCTC------------TCTTA--GCAA----AAGGCGTAC-TCTTTAAAA-----------AGCTTTTT----------------------------A-TATTTGCTCT------------------------------------------------------------------------------TGTTGTTTTTTTGTTGTTA--CTAT---TCCCAA----AGTAA----ATACA-GT--TTAATTTGTA----------------------------TGTTTTTAGCTCAAGCAACA----GCAA-AAAGCCGCCCACTAA------AAACAAC------------------AACAA---C------------------AA-AA-A--------CA--------------------------------------------------------------------G--TGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 09:35 AM