ID:dsi_30600 |
Coordinate:3r:10858978-10859127 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -37.3 | -36.9 | -36.7 |
 |
 |
 |
exon [3r_10858713_10858977_+]; CDS [3r_10858713_10858977_+]; intron [3r_10858978_10860487_+]
No Repeatable elements found
| mature | star |
| ##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CACCAACAAGTATCTGGTTGCCAAGCTATTCGATGTCACTCAAAAGACAGGTGAGTCTGCAAAACAAATGCAAAATGACCTTTGACAATTCCCTAGCTCTTCTTGCTTGGTATGTGCAGTAGGTGTTGTTGTTTGTGGCGGGTAATCCCGCTTTAATTAAGCTGAACAATGCAGAAAAATGAACTGCATCTGCACAATGGCTGAAGAAGGCTAAAATGAAAATGAAAAATGGGCTGCATAAGCCGAGTCA **************************************************....(((((((.......))))....)))............((.(((.......))).))..(((((((...((...(((..(((.((((((....)))))).)))...)))...)).((((((.........)))))))))))))....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902009 testis |
SRR553487 NRT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................TTGGTATGTGTAGTAGGTGTTT.......................................................................................................................... | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 |
| ....................................................................................................................................................................................GAACTGCATCTGCAC....................................................... | 15 | 0 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 |
| ................................................................................................................TGTGTAGTAGGTGATGATGTTT.................................................................................................................... | 22 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 |
| ....................................................................................................................................................................AACCGTGCAGAAAATTGAACT................................................................. | 21 | 3 | 6 | 0.17 | 1 | 0 | 0 | 1 | 0 |
| ..............................................................................................................TACGTACAGTAGGTGTTGA......................................................................................................................... | 19 | 3 | 9 | 0.11 | 1 | 0 | 0 | 1 | 0 |
| ...................................................................................................TTCTAGCTTGGTATGCGTA.................................................................................................................................... | 19 | 3 | 12 | 0.08 | 1 | 0 | 0 | 0 | 1 |
| ....................................................................................................................CAGTAGGTACTGTTGT...................................................................................................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 |
|
GTGGTTGTTCATAGACCAACGGTTCGATAAGCTACAGTGAGTTTTCTGTCCACTCAGACGTTTTGTTTACGTTTTACTGGAAACTGTTAAGGGATCGAGAAGAACGAACCATACACGTCATCCACAACAACAAACACCGCCCATTAGGGCGAAATTAATTCGACTTGTTACGTCTTTTTACTTGACGTAGACGTGTTACCGACTTCTTCCGATTTTACTTTTACTTTTTACCCGACGTATTCGGCTCAGT
**************************************************....(((((((.......))))....)))............((.(((.......))).))..(((((((...((...(((..(((.((((((....)))))).)))...)))...)).((((((.........)))))))))))))....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902008 ovaries |
SRR553486 Makindu_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
GSM343915 embryo |
|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................CATACACGTCATCCACTACT......................................................................................................................... | 20 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................................................................AAACACGTCATCCACTCCAAC....................................................................................................................... | 21 | 3 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 |
| ...............................................................................................CGAGAAGATCGGACCAT.......................................................................................................................................... | 17 | 2 | 6 | 0.17 | 1 | 0 | 0 | 1 | 0 |
| .............................................................................TGGAACTTGTTAAGGCATC.......................................................................................................................................................... | 19 | 3 | 14 | 0.07 | 1 | 0 | 0 | 0 | 1 |
| ........................................................................................................................................TCGCCCATTAGATCGAAAT............................................................................................... | 19 | 3 | 17 | 0.06 | 1 | 0 | 0 | 1 | 0 |
Generated: 04/24/2015 at 10:53 AM