ID:

dsi_30530

 Coordinate:

3r:11293109-11293258 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

five_prime_UTR [3r_11293007_11293108_-]; exon [3r_11292787_11293108_-]; intron [3r_11293109_11301590_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GACGTTTGATAGAGAGACGAGATGACTTGGCACAATTGCACAAAAATGCTATAGTAATTTCAATTCAAGGTTCAAATTAGGCATATATGTATGAGATTTATAGTCATGTACATCTTTAAATAATCAAAGTAGCTTGCTGAGATTTGTATTTAAATTACCAATTTAAGATATATTTTATTTGGCTTTCTTTTAGATAAAAGATTGATCGCGAAGCTTCTCCATTCGCTTCGATATCTTTTGGGCTGGCGAG
**************************************************...(((((((.(((.((((.((((...(((((....(((((((.((((...)))).)))))))((((........))))..))))).)))).)))).))).)))))))..............((((((((((.......)))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M053
female body
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
..................................................................................................................................................................................................................................TTGGAAATCTTTTGGGCT...... 18 2 6 11.00 66 58 7 0 0 0 0 1 0 0 0
..................................................................................................................................................................................................TAAAAGATTGATCGCGAAGCTTCTTCACT........................... 29 2 1 3.00 3 0 0 0 1 2 0 0 0 0 0
..................................................................................................................................................................................................................................TTCGAAATCTTTTGGGCT...... 18 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GATTGATCGCGAAGCTTCTCCATTCG......................... 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GATTCGAAATCTCTTGGGCT...... 20 3 8 1.75 14 13 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................AAAAGATTGATCGCGAAGC.................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................................TTCGATATCTTTTGGGCT...... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................CATCAAAGTAGCTTGCT................................................................................................................ 17 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................GGAAGATAAAAGATTGATCGC......................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TCGATATCTTTTGGGCTGGC... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TCTCCATTCGCTTCGAGATCTTTTGGGCT...... 29 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................TTTAGTAGCTTGCTGAGATTTGTATT.................................................................................................... 26 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................CTTCTCCATTCGCTTCGAT.................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................GATAAAAGATTGATCGCG........................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TAAAAGATTGATCGCGAAG..................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................................TTGGAAATCTTTTGGGCTG..... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CTTCGATATCTTTTGGGCT...... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTATTTGGCCTTGTTTTAGAT....................................................... 21 2 2 0.50 1 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................................TGCATTCGCGTCGATTTCTTTT........... 22 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................TTTAATTTGTCTTTCTTTTAGATAAA.................................................... 26 2 7 0.14 1 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................TATTTTCTTTGTCTTTCTTTGAGA........................................................ 24 3 7 0.14 1 0 0 0 0 0 0 0 1 0 0
.........TAGAGAGATGAGATGTCGT.............................................................................................................................................................................................................................. 19 3 10 0.10 1 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................................................................................................................ATTGGATATCTTTTGGGC....... 18 2 16 0.06 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GGTTGGAAATCTTTTGGGC....... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GATTAGAAATCTTTTGGGCT...... 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CTGCAAACTATCTCTCTGCTCTACTGAACCGTGTTAACGTGTTTTTACGATATCATTAAAGTTAAGTTCCAAGTTTAATCCGTATATACATACTCTAAATATCAGTACATGTAGAAATTTATTAGTTTCATCGAACGACTCTAAACATAAATTTAATGGTTAAATTCTATATAAAATAAACCGAAAGAAAATCTATTTTCTAACTAGCGCTTCGAAGAGGTAAGCGAAGCTATAGAAAACCCGACCGCTC
**************************************************...(((((((.(((.((((.((((...(((((....(((((((.((((...)))).)))))))((((........))))..))))).)))).)))).))).)))))))..............((((((((((.......)))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 SRR618934
dsim w501 ovaries
 GSM343915
embryo
.......................................................................................................AGTGCATGGAGAAATTTA................................................................................................................................. 18 2 3 4.33 13 2 4 3 4 0 0 0
.......................................................................................................AGTGCATGGAGAAATTT.................................................................................................................................. 17 2 10 1.00 10 6 1 2 1 0 0 0
..........TCTCTCTGCTCTACTGAACC............................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 1 0 0
.......................................................................................................AGTGCATGGAGAAATTTAC................................................................................................................................ 19 3 15 0.80 12 9 1 1 0 0 1 0
.......................................................................................................AGTGCATGGAGAAATTTATC............................................................................................................................... 20 3 3 0.33 1 0 0 1 0 0 0 0
..............................................................TGAGTTCCAAGTATAATC.......................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 1 0 0 0
........................................................................................................GTGCATGGAGAAATTTA................................................................................................................................. 17 2 15 0.20 3 0 0 0 0 0 3 0
.............................................................................................TCTAAATGTCAGAACATG........................................................................................................................................... 18 2 6 0.17 1 0 0 0 0 1 0 0
......................................................................................................GAGTGCATGGAGAAATTTA................................................................................................................................. 19 3 20 0.15 3 0 2 0 0 0 1 0
...........................................................................................ACTCTCTATATAAGTACATGT.......................................................................................................................................... 21 3 8 0.13 1 0 0 1 0 0 0 0
..............TCTGCTCTACTGTAC............................................................................................................................................................................................................................. 15 1 9 0.11 1 0 1 0 0 0 0 0
......................................................................................................................................................................................................TCTAACTAGTGGTCCGAAG................................. 19 3 9 0.11 1 0 0 0 0 0 0 1
........................................................................................................................................................................................AAGAAAATCTATTGTTTAA............................................... 19 2 12 0.08 1 1 0 0 0 0 0 0
...............................................CGATATCGTTAATGGTAAGT....................................................................................................................................................................................... 20 3 12 0.08 1 0 1 0 0 0 0 0
...........................ACCGTGTTAAAGTGGTTT............................................................................................................................................................................................................. 18 2 17 0.06 1 0 0 0 0 0 1 0
..........................................................AAGTTAAGTTCCGAG................................................................................................................................................................................. 15 1 18 0.06 1 0 0 1 0 0 0 0
.................................................................................................................GAAATTTATTAGTTC.......................................................................................................................... 15 1 20 0.05 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:11293059-11293308 - dsi_30530 GACG-TTT-----GATAGAGAGACGA---GATGACTTGGCAC------------------------------AATTGC-ACAAAAA-TGCTATAGTAATTT-CAATTCAAGGTTCAA--ATTAGGCATATATGTAT-----------------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAT-TTATAGTCATGTACATCTTTAAATAATCAAA---------------------------------------------------------------------------------------------------------GTAGCTTGCTGAGATTTGTATTTAAATTACC-----------------------------------------------------------------------------------------------------------------------------------AAT----TT-AAGATATA-------------------------TTT--TATTTGGCTT--TCTTTTAGAT-AA-AAGATTGATCGCGAAGCTTCTCC-ATTCGCTTCGATA--TCTT-TTGGGCTGGC--GAG
droSec2 scaffold_0:12123560-12123830 - GACG-TTT-----GATAGAGAGACGA---GATGACTTGGCAC------------------------------AATTAC-ACAAAAA-TGCTATAGTAATTT-CAATTCAAGGTTCAA--ATTAGGCATATATAAAT-----------------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAT-ATACAGTCATGTACATATTTAAATGATCAAAGTAATT---------------ATA---------------------------------------------------------------------AATTATTCTTTAGTAGCTTGCTGAGATTTGTATTTAAATTACT-----------------------------------------------------------------------------------------------------------------------------------AAT----AT-AAGATATA-------------------------TTT--CATTTGGCTT--TCTTTTAGAT-AA-AAGATTGATCACGAAGCTCCTTC-ATTCGCTTCGATA--TCTT-TTGGGCTGGC--GAG
dm3 chr3R:9892032-9892312 + GACG-ATT-----GATAGAGAGACAA---GATGACTTGACAA------------------------------AATTAC-ACAAAAA-TGCTATAGTAATTT-CAATCCAAGGTTAAA--ATTCGACATATATGTAT-----------------GA-----------------------GTACTCTG------------AACAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------GAT-ATATAGTCATGTACAACTTTAAATGATCAAAGTAATT---------------TTA---------------------------------------------------------------------AATTAATCTTTAGTAGCTTGATTAGATTTGTATTTAAATTATT-----------------------------------------------------------------------------------------------------------------------------------AATATAATT-AAGATATA-------------------------TTT--TAATTGGCTT--TCTTTTA---------GATTGATTGCGAAGCTTTCAC-ATTCGCTTCGATA--TCTT-TTGGGCTGGC--GAG
droEre2 scaffold_4770:9432699-9432971 + GACG-CTT-----GATAGAGAGATGA---GATGACTGGGCAC------------------------------AATTAC-AGAAAAA-TGCTTTAGTAATTT-CAATTCAAGGTTAAA--ATTCGGCATATATCTA-----------------TTG-----------------------CTTCTCTGTA--GCACTGAGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCT-----------------------------------------------------------------A-------TTAAAAAAAATGTTAAAACTAATTGAGCTA-ACTTTAGTAGCCTTGTGACAGCTTTATTTGTGTTATT-----------------------------------------------------------------------------------------------------------------------------------AAT----TT-TAGATATA-------------------------TCC--TAATT------GCTTTTCAGAT-AA-AAGATAGATCGCGAAGCTACC-C-TTTTGCTTCGATA--TT-T-TTGGGCTGGC--GAG
droYak3 3R:16540010-16540288 - GACG-CTT-----GATAGAGAGATGG---GATGACTTGGCAC------------------------------AATTAC-AGCAAAA-TGCTAGAGTGATTT-TAATTCAAGGTTAAA--ATT---CATATATGAATACTATACCATTATCTATTG-----------------------ATTCTCTGTA--GTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCGCTAAATCTTTAAAGTAATTTCGA-----GCAGTTTTGG---------------------------------------------------------------------ATTATTCTTTAGTAGCCTGGTGATAATT---------TTATT-----------------------------------------------------------------------------------------------------------------------------------AAT----TT-AAGATATA-------------------------TCT--TGTTT----T--TTTTTTAGGT-AA-AAGATTGATTGCGAAGCTTCCCC-TTTCGCTTCGATA--TTTT-TTGGGCTGGC--GAG
droEug1 scf7180000409802:50688-51055 - AATG-CTT-----GACAGAGAGATGA---GATGACTTGACAC------------------------------AATTAC-AGGAAAA-AGCTTTAGTAATTT-CGATTGAAGGTTAAT--GTTTGGCATCCGTGCATAT-------------ATCTAT------CTTTCT-ATTT-TGAATTTTCCATA--GAACTGTGAATAA------TA--ATATGGTACATTCCT---TTTAATAATAAATTACAAAAACAATATTAATATATAAACTATATTTTAAGAGTTCTGTAAGC-------------------------------CTCAGAGAAAGTTCTGCTTTCAAAACGTGCTTTACTTATCTTTGAA-TACTATT------------------------------CAAAATATATTGTT------------------------------------------------------------------------------------------------------------------TT-----------------------------------------------------------------------------------------------------------------------------------AAT----ATC-----------------------------TGAAATTATC--TT----T--TTTTTCAGAT-AA--CAATTGATTGCGAATCTTTCGAAATTCGCTTCGATT--ATTT-TTGGGCTGGC--GAG
droBia1 scf7180000302402:2679624-2679728 + AT-GTATATGTAAACTCAATAACT-A---AAAGGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCTATG-----TT-TCCTTAGGT-GA--CAACTGATCACGAGGCTCACCA-CTCGGCTTCGATT--CTTT-TTGGGCTGGC--GAG
droTak1 scf7180000415380:782504-782747 + TTT--------------GAGAGACAA---GATGAGTTGACAA------------------------------AATTGC-AGTAAAA-TACTGTAGTCATTA-AAATTCAAGGTTAAT--CTTTGGAACAAATTACT-----------------------------------------------------TATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGAT-TTATATCTAT-------TTTAAATGA-------AA---------------TACAAAATATTTCTTTAGCTTGTAATATCTTCAAA--TAGTAA------AAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACAATT-------------------------------------------------TG-------TATTT-----TGCATTTCAGGT-AACACAACTGATCGCGAAGCTTACCA-ATTGGCCTCGATA--CTTT-TTGGGCTGGC--GAG
droEle1 scf7180000491047:1268470-1268556 - TT-G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----------------------------------------------------------------------------------------------------------------------------------AAT----TTA-----------------------------TGTATTT--T-TTC-----TG-CTCTCAGAT-TA--CGATTGATCGCCAGGCCTTACA-ATTAGCCTCGATA--CTTT-CTGGGCTGGC--GAG
droRho1 scf7180000762597:13531-13920 + AATG-CTT-----GACAG--AGTTGA---GATGATTTGACAC------------------------------AA----------AG-TACTAAAGTCATTTACAATTCAAGGTTAAT--TTTTGGCTTTTATATCT---------------ATCAATCTTCCTCTTTCT-ATTTTTGA-T--TCAATT--GCACTGAGAACAAATGCCATAATGTATCAAACGTTCCTAAATTTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------------------AA---------------------------------------------------------------------------ATATTA---------TTATTAATTTCAGATTTTACTAAAGTTTTGTATATATGGTAGACTTTGGATGTTCACCCACTTTCGTTCAATATCTATGTTTTGCAAAATACGGTTTTAAGAAAAGATTTTTTTTAGAAAACAATTGTA----GTTAAT----TTA-----------------------------TGTATTTTTCTTTA-----CA-GCTTCAGGT-TG--CGATTGATCGCGAGGCTTTCCA-ATTTGCTTCGATA--CTTT-TTGGGTTGGC--GAG
droFic1 scf7180000453912:397565-397844 + AAAG-CTT-----TAGAGACAGTTTG-ATGATGACTTGGCAT------------------------------AATCAC-AAAA----------AGTCATTTAAAATTCAAGGTTAAT--TTTTGGCTTACATTAT------------------CA-----------------------GCAAAGCA-AACACA-----------TCCG----------------------------------------------CTATGTTTTTAGAACCCGTGTTTTAAGATTTT---------------------------------------------------------------------------------------------------------------------------------------TATGAGATTATTCTTTACCTCATATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA-----------------TATAGAAAATGAATGTAAAATGCTGAT----TT-TAAATATA-------------------------TTTTTCCTTC-----TG-TTCTCAGGT-GT--CTTTTGATCGCGAACCCTTCCA-AC-TACTTCTATT--TTTTTGTGCGCTGGC--GAG
droKik1 scf7180000302475:1247069-1247457 - AATG-CTT-----AGCAGGAAGATGATATGATGACTTGACAC------------------------------ATTCGT-AGAT-AG-CTTTATAGCAATTT-CAATTCAAGGTGAAT--C----------------------------------AAT------CTCTCTTATAA-TGA-T--T---TT--GCACTAAAAAAAGAT------------------------------------------------------------------------------TTATATAAGGTTAATGTTTTTATATATTTCCAAATAAATTACCAAAAAATAGCTGAGGTTTAAAAAAGTAT-ACACATTTTGTTGAAAT-ATTTT------------------------------CCAAATAAATTATTTCAGGGTTAACCTTTAACCTTTA-T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAA-----------------TATAGAAAAAAAATCCTTAAATTAGAT----TG-TATATATTTCCTGATTAATAATTCTTTCCCCAATTCAT------GTCC--TT-TTCAGGATAA-AGAACTAATCGCAATATATCTGC-GACTGCTTCGACA--TTTTCTGAGGCTGGCTGGAG
droAna3 scaffold_13340:20583056-20583246 - AATA-CTT-----GGCAGTGAGATGA---GATGACTTGACAT------------------------------AATT-----------------------------TTCAAGGTGTTAATATTTTCCT--GATTATA-----------------------------------------------------TGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGAC-T-------------------AAA---TTAT----------------------------------------AGTTGTTTCTTCAAAAATTCTCCAACTAATT------ATTTTTATAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--ATTTTCCAGAT-TA------TAATCCCGAAGCTTGAGT-GTGTGCTTCGGTAATTTTT-TTGGGCTGGC--GTG
droBip1 scf7180000396413:1819645-1819857 + AT-A-CTT-----GGCACTTAGATGA---GATGACTTGACAT------------------------------AATTAGAAGTAACATAATTATAGAAAAAT-CCATTCAAGGTGTTTATATTTTCCT---------------------------------------------------------------GTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGC-T-------------------TAA---TGGT----------------------------------------TGTTGTTTCTTAT-AAATTCTAA------TTTAATAAAATTTTAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA--CTTTTTCAGAT-TA-TATTATAATCCCGGAGCTTGAGA-GTGTCCTTCGGTA--ATTTCTTGGCCTGGC--GTG
dp5 2:13501713-13501789 - AATG-ATA-----AAACGATCACT-G---AATGATGTTGCACAAAGATCCGTGTATTACAATGACTAGACACG------------------------------AATTCAAGGTTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
droPer2 scaffold_0:6947194-6947270 + AATG-ATA-----AAACGATCACT-G---AATGATGTTGCACAAAGATACGTGTATTACAATGACTAGACACG------------------------------AATTCAAGGTTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
droMoj3 scaffold_6540:33197177-33197199 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACA--GCTT-TGAGTTGGGC--GAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GACG-TTT-----GATAGAGAGACGA---GATGACTTGGCAC------------------------------AATTGC-ACAAAAA-TGCTATAGTAATTT-CAATTCAAGGTTCAA--ATTAGGCATATATGTAT-----------------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAT-TTATAGTCATGTACATCTTTAAATAATCAAA---------------------------------------------------------------------------------------------------------GTAGCTTGCTGAGATTTGTATTTAAATTACC-----------------------------------------------------------------------------------------------------------------------------------AAT----TT-AAGATATA-------------------------TTT--TATTTGGCTT--TCTTTTAGAT-AA-AAGATTGATCGCGAAGCTTCTCC-ATTCGCTTCGATA--TCTT-TTGGGCTGGC--GAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGATCGCGAAGCTTCTCC-ATTCG..............................2612.00200020000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-AAGATTGATCGCGAAGC..........................................1911.00100000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGATA--TCTT-TTGGGCT........1811.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATA--TCTT-TTGGGCTGGC--...2011.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTCC-ATTCGCTTCGAT.......................1911.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT-AA-AAGATTGATCGCG..............................................1811.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AA-AAGATTGATCGCGAAG...........................................1911.00100000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGATA--TCTT-TTGGGCT........1911.00110000000000000000
droSec2
GACG-TTT-----GATAGAGAGACGA---GATGACTTGGCAC------------------------------AATTAC-ACAAAAA-TGCTATAGTAATTT-CAATTCAAGGTTCAA--ATTAGGCATATATAAAT-----------------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAT-ATACAGTCATGTACATATTTAAATGATCAAAGTAATT---------------ATA---------------------------------------------------------------------AATTATTCTTTAGTAGCTTGCTGAGATTTGTATTTAAATTACT-----------------------------------------------------------------------------------------------------------------------------------AAT----AT-AAGATATA-------------------------TTT--CATTTGGCTT--TCTTTTAGAT-AA-AAGATTGATCACGAAGCTCCTTC-ATTCGCTTCGATA--TCTT-TTGGGCTGGC--GAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTAGCTTGCTGAGATTTGT....................................................................................................................................................................................................................................................................................2111.0010100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTTCGATA--TCTT-TTGGGCTGGC--...2411.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AA-AAGATTGATCACGAA............................................1811.0010010
dm3
GACG-ATT-----GATAGAGAGACAA---GATGACTTGACAA------------------------------AATTAC-ACAAAAA-TGCTATAGTAATTT-CAATCCAAGGTTAAA--ATTCGACATATATGTAT-----------------GA-----------------------GTACTCTG------------AACAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------GAT-ATATAGTCATGTACAACTTTAAATGATCAAAGTAATT---------------TTA---------------------------------------------------------------------AATTAATCTTTAGTAGCTTGATTAGATTTGTATTTAAATTATT-----------------------------------------------------------------------------------------------------------------------------------AATATAATT-AAGATATA-------------------------TTT--TAATTGGCTT--TCTTTTA---------GATTGATTGCGAAGCTTTCAC-ATTCGCTTCGATA--TCTT-TTGGGCTGGC--GAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTA---------GATTGATTGCGAAGCTTT.......................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGATA--TCTT-TTGGGCTGGC--...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCTTTCAC-ATTCGCTTCGAT.......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTTCAC-ATTCGCTTCGATA--TCT.................2511.0010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ATT-----GATAGAGAGACAA---GATGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------GATTGATTGCGAAGCTTT.......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--TCTTTTA---------GATTGATTGCGA.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................AT-ATATAGTCATGTACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATA--TCTT-TTGGGCTGGC--...1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAC-ATTCGCTTCGATA--TCTT-TTGGGC.........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAC-ATTCGCTTCGATA--TCTT-TT.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGATA--TCTT-TTGGGCTGGC--GA.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TCTTTTA---------GATTGATTGCGTG............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATA-------------------------TTT--TAATTGGCTT--TCTTTTA---------G........................................................2511.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCTTCGATA--TCTT-TTGGGCTGG......2511.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAATT---------------TTA---------------------------------------------------------------------AATTAATCTTTAGTAGCT.................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCAC-ATTCGCTTCGATA--TCTT-T..............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAC-ATTCGCTTCGATA--TCTT-TTGGGC.........2711.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTTCGATA--TCTT-TTGGGCTGG......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-AAGATATA-------------------------TTT--TAATTGGCTT--TCTTT....................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATA--TCTT-TTGGGCTGGC--...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGAAGCTTTCAC-ATTCGCTTCGA........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGATA--TCTT-TTGGGCTGGC--G..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGATA--TCTT-TTGGGCTGG......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCTTCGATA--TCTT-TTGGGCTGGC--...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTTCAC-ATTCGCTTCGATA--T...................2311.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GACG-CTT-----GATAGAGAGATGA---GATGACTGGGCAC------------------------------AATTAC-AGAAAAA-TGCTTTAGTAATTT-CAATTCAAGGTTAAA--ATTCGGCATATATCTA-----------------TTG-----------------------CTTCTCTGTA--GCACTGAGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCT-----------------------------------------------------------------A-------TTAAAAAAAATGTTAAAACTAATTGAGCTA-ACTTTAGTAGCCTTGTGACAGCTTTATTTGTGTTATT-----------------------------------------------------------------------------------------------------------------------------------AAT----TT-TAGATATA-------------------------TCC--TAATT------GCTTTTCAGAT-AA-AAGATAGATCGCGAAGCTACC-C-TTTTGCTTCGATA--TT-T-TTGGGCTGGC--GAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGATA--TT-T-TTGGGCT........1811.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCTTCGATA--TT-T-TTGGG..........2111.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAGATCGCGAAGCTACC-C-TTTTGC.............................2611.0011000000
droYak3
GACG-CTT-----GATAGAGAGATGG---GATGACTTGGCAC------------------------------AATTAC-AGCAAAA-TGCTAGAGTGATTT-TAATTCAAGGTTAAA--ATT---CATATATGAATACTATACCATTATCTATTG-----------------------ATTCTCTGTA--GTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCGCTAAATCTTTAAAGTAATTTCGA-----GCAGTTTTGG---------------------------------------------------------------------ATTATTCTTTAGTAGCCTGGTGATAATT---------TTATT-----------------------------------------------------------------------------------------------------------------------------------AAT----TT-AAGATATA-------------------------TCT--TGTTT----T--TTTTTTAGGT-AA-AAGATTGATTGCGAAGCTTCCCC-TTTCGCTTCGATA--TTTT-TTGGGCTGGC--GAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTCCCC-TTTCGCTTCGAT.......................2111.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TTTTTTAGGT-AA-AAGATTGATTGCGA.............................................2711.00100000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGATTGCGAAGCTTCCCC-TTTC...............................2511.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGAAGCTTCCCC-TTTCGCTTC..........................2511.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-AAGATTGATTGCGAAGCTTCCCC-T..................................2611.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AA-AAGATTGATTGCGAAGC..........................................2011.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-AA-AAGATTGATTGCGAAGCTTCCC.....................................2611.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AA-AAGATTGATTGCGAAGCTTCCCC-T..................................2711.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGATTGCGAAGCTTCCCC-TTT................................2411.00100000010000
.........................G---GATGACTTGGCAC------------------------------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15150.07100000000001
droEug1
AATG-CTT-----GACAGAGAGATGA---GATGACTTGACAC------------------------------AATTAC-AGGAAAA-AGCTTTAGTAATTT-CGATTGAAGGTTAAT--GTTTGGCATCCGTGCATAT-------------ATCTAT------CTTTCT-ATTT-TGAATTTTCCATA--GAACTGTGAATAA------TA--ATATGGTACATTCCT---TTTAATAATAAATTACAAAAACAATATTAATATATAAACTATATTTTAAGAGTTCTGTAAGC-------------------------------CTCAGAGAAAGTTCTGCTTTCAAAACGTGCTTTACTTATCTTTGAA-TACTATT------------------------------CAAAATATATTGTT------------------------------------------------------------------------------------------------------------------TT-----------------------------------------------------------------------------------------------------------------------------------AAT----ATC-----------------------------TGAAATTATC--TT----T--TTTTTCAGAT-AA--CAATTGATTGCGAATCTTTCGAAATTCGCTTCGATT--ATTT-TTGGGCTGGC--GAGSizeHit CountTotal NormTotal
No Reads
droBia1
AT-GTATATGTAAACTCAATAACT-A---AAAGGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCTATG-----TT-TCCTTAGGT-GA--CAACTGATCACGAGGCTCACCA-CTCGGCTTCGATT--CTTT-TTGGGCTGGC--GAGSizeHit CountTotal NormTotal
No Reads
droTak1
TTT--------------GAGAGACAA---GATGAGTTGACAA------------------------------AATTGC-AGTAAAA-TACTGTAGTCATTA-AAATTCAAGGTTAAT--CTTTGGAACAAATTACT-----------------------------------------------------TATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGAT-TTATATCTAT-------TTTAAATGA-------AA---------------TACAAAATATTTCTTTAGCTTGTAATATCTTCAAA--TAGTAA------AAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACAATT-------------------------------------------------TG-------TATTT-----TGCATTTCAGGT-AACACAACTGATCGCGAAGCTTACCA-ATTGGCCTCGATA--CTTT-TTGGGCTGGC--GAGSizeHit CountTotal NormTotal
No Reads
droEle1
TT-G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----------------------------------------------------------------------------------------------------------------------------------AAT----TTA-----------------------------TGTATTT--T-TTC-----TG-CTCTCAGAT-TA--CGATTGATCGCCAGGCCTTACA-ATTAGCCTCGATA--CTTT-CTGGGCTGGC--GAGSizeHit CountTotal NormTotal
No Reads
droRho1
AATG-CTT-----GACAG--AGTTGA---GATGATTTGACAC------------------------------AA----------AG-TACTAAAGTCATTTACAATTCAAGGTTAAT--TTTTGGCTTTTATATCT---------------ATCAATCTTCCTCTTTCT-ATTTTTGA-T--TCAATT--GCACTGAGAACAAATGCCATAATGTATCAAACGTTCCTAAATTTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------------------AA---------------------------------------------------------------------------ATATTA---------TTATTAATTTCAGATTTTACTAAAGTTTTGTATATATGGTAGACTTTGGATGTTCACCCACTTTCGTTCAATATCTATGTTTTGCAAAATACGGTTTTAAGAAAAGATTTTTTTTAGAAAACAATTGTA----GTTAAT----TTA-----------------------------TGTATTTTTCTTTA-----CA-GCTTCAGGT-TG--CGATTGATCGCGAGGCTTTCCA-ATTTGCTTCGATA--CTTT-TTGGGTTGGC--GAGSizeHit CountTotal NormTotal
No Reads
droFic1
AAAG-CTT-----TAGAGACAGTTTG-ATGATGACTTGGCAT------------------------------AATCAC-AAAA----------AGTCATTTAAAATTCAAGGTTAAT--TTTTGGCTTACATTAT------------------CA-----------------------GCAAAGCA-AACACA-----------TCCG----------------------------------------------CTATGTTTTTAGAACCCGTGTTTTAAGATTTT---------------------------------------------------------------------------------------------------------------------------------------TATGAGATTATTCTTTACCTCATATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA-----------------TATAGAAAATGAATGTAAAATGCTGAT----TT-TAAATATA-------------------------TTTTTCCTTC-----TG-TTCTCAGGT-GT--CTTTTGATCGCGAACCCTTCCA-AC-TACTTCTATT--TTTTTGTGCGCTGGC--GAGSizeHit CountTotal NormTotal
No Reads
droKik1
AATG-CTT-----AGCAGGAAGATGATATGATGACTTGACAC------------------------------ATTCGT-AGAT-AG-CTTTATAGCAATTT-CAATTCAAGGTGAAT--C----------------------------------AAT------CTCTCTTATAA-TGA-T--T---TT--GCACTAAAAAAAGAT------------------------------------------------------------------------------TTATATAAGGTTAATGTTTTTATATATTTCCAAATAAATTACCAAAAAATAGCTGAGGTTTAAAAAAGTAT-ACACATTTTGTTGAAAT-ATTTT------------------------------CCAAATAAATTATTTCAGGGTTAACCTTTAACCTTTA-T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAA-----------------TATAGAAAAAAAATCCTTAAATTAGAT----TG-TATATATTTCCTGATTAATAATTCTTTCCCCAATTCAT------GTCC--TT-TTCAGGATAA-AGAACTAATCGCAATATATCTGC-GACTGCTTCGACA--TTTTCTGAGGCTGGCTGGAGSizeHit CountTotal NormTotal
No Reads
droAna3
AATA-CTT-----GGCAGTGAGATGA---GATGACTTGACAT------------------------------AATT-----------------------------TTCAAGGTGTTAATATTTTCCT--GATTATA-----------------------------------------------------TGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGAC-T-------------------AAA---TTAT----------------------------------------AGTTGTTTCTTCAAAAATTCTCCAACTAATT------ATTTTTATAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--ATTTTCCAGAT-TA------TAATCCCGAAGCTTGAGT-GTGTGCTTCGGTAATTTTT-TTGGGCTGGC--GTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAAGCTTGAGT-GTGTGCTT...........................2111.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGAGT-GTGTGCTTCGGTA......................2111.001100000
droBip1
AT-A-CTT-----GGCACTTAGATGA---GATGACTTGACAT------------------------------AATTAGAAGTAACATAATTATAGAAAAAT-CCATTCAAGGTGTTTATATTTTCCT---------------------------------------------------------------GTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGC-T-------------------TAA---TGGT----------------------------------------TGTTGTTTCTTAT-AAATTCTAA------TTTAATAAAATTTTAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA--CTTTTTCAGAT-TA-TATTATAATCCCGGAGCTTGAGA-GTGTCCTTCGGTA--ATTTCTTGGCCTGGC--GTGSizeHit CountTotal NormTotal
No Reads
dp5
AATG-ATA-----AAACGATCACT-G---AATGATGTTGCACAAAGATCCGTGTATTACAATGACTAGACACG------------------------------AATTCAAGGTTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......TA-----AAACGATCACT-G---AATGATGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020200000000
..............................ATGATGTTGCACAAAGATCCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
droPer2
AATG-ATA-----AAACGATCACT-G---AATGATGTTGCACAAAGATACGTGTATTACAATGACTAGACACG------------------------------AATTCAAGGTTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droMoj3
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACA--GCTT-TGAGTTGGGC--GAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads

Generated: 05/18/2015 at 09:30 AM