ID:

dsi_30500

 Coordinate:

2l:13483750-13483899 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

five_prime_UTR [2l_13483900_13483920_+]; CDS [2l_13483921_13484506_+]; exon [2l_13483900_13484506_+]; intron [2l_13483060_13483899_+]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATCACTTGAGATACATACTGATATATAGTATAAAGCGTTTCGATCTGACCCCAGAGTCATCCGAAAATGCGACACTTTAATCAATTACGCGAGAGCGTTCTCCTCATCAGATACGTCATCGAGTTGACATAACAATATAAAACAGAACTGGATCGTGTGTAATCGAAATTCAAATTCAAAATGCTTACTATAATTTCCAGGCGAGAAAGTAGTTGATCAACATGAGACTGTTCCTGCTAGCCCTGCTGGC
**************************************************........................((..((((.((((((((.((..(((((.............((((......))))...............)))))....)).)))))))).))............................))..))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M053
female body
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
..................................................................................................................................................................................................................AGTTGATCAACATGAGACT..................... 19 0 1 4.00 4 4 0 0 0 0
.............................................................................................................................................................................................................................ATGAGACTGTTCCTGCTAGCC........ 21 0 1 3.00 3 3 0 0 0 0
..............................................................................................................................................................................................................AAGTAGTTGATCAACATGAGACT..................... 23 0 1 2.00 2 2 0 0 0 0
...........................................................................................................................................................................................................................ACATGAGACTGTTCCTGCT............ 19 0 1 2.00 2 1 0 0 1 0
............................................................................................................................................................................................................................CATGAGACTGTTCCTGCT............ 18 0 1 2.00 2 2 0 0 0 0
..........................................................................................................................................................................................................GAGAAAGTAGTTGATCAACATGA......................... 23 0 1 1.00 1 0 1 0 0 0
...................................................................................................................................................................................................................GTTGATCAACATGAGACT..................... 18 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................ATCAACATGAGACTGTTCCTGCTA........... 24 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................................GTTCCTGCTAGCCCTGCTG.. 19 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................TAGTTGATCAACATGAGACTGT................... 22 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................GAGAAAGTAGTTGATCAACATGAGACT..................... 27 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................AACATGAGACTGTTCCTGCTAGCC........ 24 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................................ACATGAGACTGTTCCTGCTAG.......... 21 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................AACATGAGACTGTTCCTGCT............ 20 0 1 1.00 1 0 0 1 0 0
..................................................................................................................................................................................................................AGTTGATCAACATGAGACTGT................... 21 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................................TGAGACTGTTCCTGCTAGCCCTGCTGGC 28 0 1 1.00 1 0 1 0 0 0
...................................................................................................................................................................................................................GTTGATCAACATGAGACTGG................... 20 1 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................AGTTGATCAACATGAGAC...................... 18 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................ATCAACATGAGACTGTTCCTGCTAGC......... 26 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................GTACTTGATCAACATGAGACT..................... 21 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................ATGAGACTGTTCCTGCTAGCCCTGCT... 26 0 1 1.00 1 0 0 1 0 0
...........................................................................................................................................................................................................................ACATGAGACTGTTCCTGCTAGCC........ 23 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................AACATGAGACTGTTCCTGCTAGCCC....... 25 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................CAACATGAGACTGTTCCTGCTAGC......... 24 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................GTAGTTGATCAACATGAGACT..................... 21 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................AGTTGATCAACATGAGAAT..................... 19 1 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................GAGAAAGTAGTTGATCAACATGAGA....................... 25 0 1 1.00 1 0 1 0 0 0
.......................................................................................................................................................................................................................ATCAACATGAGACTGTTCCT............... 20 0 1 1.00 1 1 0 0 0 0
...................................................................................................CTCCTCAACAGATACGAC..................................................................................................................................... 18 2 4 0.25 1 1 0 0 0 0
........................................................................................................CATCAGATAAGTCATCA................................................................................................................................. 17 2 12 0.08 1 0 0 0 0 1
...............................................................................................................................................................................................................................GAGGCTGTTCCTGCT............ 15 1 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

TAGTGAACTCTATGTATGACTATATATCATATTTCGCAAAGCTAGACTGGGGTCTCAGTAGGCTTTTACGCTGTGAAATTAGTTAATGCGCTCTCGCAAGAGGAGTAGTCTATGCAGTAGCTCAACTGTATTGTTATATTTTGTCTTGACCTAGCACACATTAGCTTTAAGTTTAAGTTTTACGAATGATATTAAAGGTCCGCTCTTTCATCAACTAGTTGTACTCTGACAAGGACGATCGGGACGACCG
**************************************************........................((..((((.((((((((.((..(((((.............((((......))))...............)))))....)).)))))))).))............................))..))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 M023
head
 SRR618934
dsim w501 ovaries
.................................................................................................AAGGGGAGTAGACTATGGAGT.................................................................................................................................... 21 3 1 1.00 1 1 0 0 0 0
............................................................................AATTAGTTAGTGCGCT.............................................................................................................................................................. 16 1 2 0.50 1 0 1 0 0 0
..................................................................................................................................................................................................AGGGTCCGCTCTTTCAACAAA................................... 21 3 5 0.20 1 0 0 1 0 0
................................................GGGGTCTCAGGCGGCTTT........................................................................................................................................................................................ 18 2 7 0.14 1 0 0 0 1 0
...................................................................................TAATGCGCACTCCCAA....................................................................................................................................................... 16 2 18 0.11 2 2 0 0 0 0
................................................................................................................................................................................................................CATCAACTAGTTGTAGTAAG...................... 20 3 9 0.11 1 0 0 1 0 0
...................................................................................................................AGTAGTTCATCTGTATT...................................................................................................................... 17 2 17 0.06 1 1 0 0 0 0
...........................................................................................................................................................................................................................TGGACTCTGACAGGGA............... 16 2 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:13483700-13483949 + dsi_30500 ATC-------------------ACTTGAGATACA---TA----CTGATA-----TATAGTATA----AAGCGTTTCGA--TCTGACCCC-AGAGTCATCCGAAA-ATGCGACAC----TTTAATCAATTACGCG-AGAGC-G--TTCTCCTCATCA-------------------------GATACGTCATC----------G-AGTTGACATAACAATAT--AAAACA---GAAC-TGGATCGTGTGTAATCGAAATT-CAAATTCA---A-------------------------AA--TGCTTA-CTA-TAATT--TCCAGGCGAGAAAGTAGTTGATCAACATGAGACTGTTCCT---GCTAGCCCTGCTGGC
droSec2 scaffold_3:163485-163734 + ATC-------------------ACTTGAGATACA---TA----CTGATA-----TATAGTATA----AAGCGTTTCGA--TCTGACCCC-AGAGTCATCCGAAA-ATGCGACAC----TTTAATCAATTACGCG-AGAGC-G--TTCTCCTCATCA-------------------------GATACGTCATC----------G-AGTTGACATAACAATAT--AAAACA---GAAC-TGGATCGTGTGTAATCGAAATT-CAAATTCA---A-------------------------AA--TGCTTA-CTA-TAATT--TCCAGGCGAGAAAGTAGTTGATCAACATGAGACTGTTCCT---GCTAGCCCTGCTAGC
dm3 chr2L:13906346-13906615 + ATC-------------------ACTTGAGATACA---TA----CTGATATATAGTATAGTATA----AAGCGTTTCGA--TCTGACCCC-AGAGTCATCCGAAA-ATGCGACAT----TTTAATCAATTACGCG-AGAGC-G--TTCTCCTCATCA-------------------------GATACGTCATC----------G-AGTTGACATAACAACAT--AAAGCA---GAAC-TGGATCGTGTGTAATCGAAATT-CAAAAAAAAAA-------------AAAAAAAAAACAAAA--TGCTTA-CTA-TATTT--TCCAGGCGCGAAAGTAGTTGATCAACATGAGACTGTTTCT---GCTAGCCCTGCTGGC
droEre2 scaffold_4929:11566084-11566318 - ATC-------------------ACTTAAGATACG---TATATGTAGATA-----TATAGTATA----AAGCCTTTCGA--TCTGACCCC-AGAGTCATCCCCAA-ATGAGAC------TTTAATCATTTGTGCG-AGAGCAGAAGAACGC---TCA-------------------------GATACGTCATC----------G-AATTGACATAACGAC------------------TGGAACGAGTGTAATTGAAATT-CAA--------A-------------------------AA--TGCTTA-ATC-AAATT--TCCAGGCGAGAAAGTTGTTGCTCACTATGAGACTGTTTTT---GCTAGCCCTGTTGGC
droYak3 2L:10313033-10313265 + ATC-------------------ACTTGAGATACA---TA----CAGATA-----TATAGTATA----GGGCGTTTCGA--TCAGACCCC-AGAGTCATCCGAAA-ATGAGACAT----TTTAATCTATTGCGCG-AGAGC-G--TTCTACTCATCA-------------------------GATACATCATC----------G-AATTGACATAACAAC------------------TGGAATGAATGTAATCGAAATT-CAA--------A-------------------------AA--TGCTTA-CTT-TAATT--TCCAGGCGAGAAAGTTGCTTCTCAACATGAGACTGTTTTT---GCTAGCCCTGCTGGC
droEug1 scf7180000409452:468068-468326 + ATC-------------------ACTTGAGACACA---TA----TTGACT-----TATAGTATA----AAGCGTGTCGA--TCTGACCCC-AGAGTCATCTGAAA-ATGAGACAT----TTTAATCAATTACGCG-AGAGA-C--TTCGTCTCGGCACACTGAAATATC----------A--GCTACGTCATC----------G-AATTGGCATAACAACAT--GTCGTA---GAAA-TGGAACGAGTCTAATCAAAATT-CAA--------A-------------------------AA--TGTTCTACTA-TAATT--TCTAGGCGAGAAAGTTGGAGATCAATATGAAACTAACGCT---AGTATTTCTGCTGGC
droBia1 scf7180000302408:2421166-2421403 - ATT-------------------AATTGGGATGCA---T----------A-----TATAGTATA----AAGCGTGTCGA--TCTGACCCC-AGAGTCATTTGAAA-ATGAAACAT----TTTTATTAATTACGCG-AGAGA-C--T-CGCGTTGACACACTGAAATATCA-TATCAGATA--TATACGTCATC----------AGAATTAGCAT------------------------TGAACCGAGTCTAATCAAAATT-CAG--------A-------------------------AA--TGCTCA-CTA-TAATT--TCCAGG-----AAGTTGTAACTCAATATGAGACTGTTTCT---GGTGGTGCTGCTGGC
droTak1 scf7180000415399:1423062-1423306 - ATC-------------------AATTGATATAAAGAGTA----CATATA-----TATAGTATA----AAGCGTGTCGA--TCTGACCCC-AGAGTCATACGAAAAATGAGACAT----TTTAATCAATTACGCG-AGAGA-C--TTCGTCTCGACA-------------------------GATACGTCATC----------GAAATTGGCATAACAAGAT--GTCGTA---GAA----------TTCTGATAGAAATTTGAA--------A-------------------------AA--TGCTTA-CTA-TAATT--TCCAGGCGAGAAAGTTCGAGCTGAAAATGAGACTGTTTCTTCTGGCTGCCCTGCTGGC
droEle1 scf7180000491338:1518953-1519199 + TTC-------------------ACTGCAG-TATA---TA----TA-GTA-----TATAGTATA----TGGCGTGTCGA--TCTGACCCC-AAAGTCATCCGAAA-ATGAGACAT----TTTAATCAATTACGCG-GGAGA-C--CTCATCTCGGCACAC------------------------TACGTCATC----------G-AATTGGCATAACAACAT--GTCGAATAGGAAT-AGGAACGAGTCTAATCAAAATT-CAA--------A-------------------------AA--TGCTTA-CTA-TAATT--TCCAGGCGAGAAAGTTGGATCTCAATATGAGACTGTTTCT---GCTAGCCCTGCTGGC
droRho1 scf7180000780107:168837-169086 - TTC-------------------ACAGCAG-----------------TTC-----TATAGTATA----CAGCGTGTCGA--TCTGACCCC-AGAGTCATCCGAAA-ATGAGACAT----TTTAATCAATTACGCG-AGTGA-C--TTGATCTCGACACACTGAAAGATC----------G--GCGACGTCATC----------G-AATTGGCATAACAACATGTGTCGTA---GAAT-TGGATCGTGTCTAATCAAAATT-CAA--------A-------------------------AA--TGCTTA-CTA-TAATT--TCCAGGCGAGAAAGTCGGAGCTCAATATGAGACTGTTTCT---GATAGTACTGCTGGC
droFic1 scf7180000454082:156768-157013 - CTT-------------------ACTTGAGG-----------------TA-----TATAGTATA----TATCGTGCCGA--TCTGACCCC-AGAGTCATCCGAAA-ATGAGACAT----ATTAATCAATTGCGCG-AGAGA-C--TTCGCTGCGACAAACTGATAAATC----------A--GATACGTCATC----------G-AATTGGCGTAACAAACT--GTCGTA---GAAT-TGGAACGATTCTAATAAAAATT-CAA----------------------------------AA--TGCTTT-CTA-TAATT--CCCAGGCGAGAAAGTTG-ATCACAAAATGAGACTGTTACT---GGTAGCCCTGCTGGC
droKik1 scf7180000302236:49635-49883 - -TC-------------------ACTTGAGAATC---------------------TTTGGCAGT----ATGTGTGCCGA--TCTGACCCC-AGAGTCATCAGAAC-ATGAGACAT----TTTAATCAATTAAGGGGAGAGA-C--TGACTCTCAGCAGAATGAA--------ATTAGATCTATGTACGTCATC----------G-AATTGCCATTATAACGT--GTCATA---GAATTGTGATAGAT-----TCTAAATT-CAA--------A-------------------------AA--TGCTAA-CTA-AACTT--TCCAGGCAACAAATTTGGCGCATAAAATGAGGCTGTTCCT---CGTAGCACTCCTTGC
droAna3 scaffold_12916:11872561-11872834 - GGT-------GCTTCACT-TTCACTTGAGACAAA---TA----TG-G-------TATAGTATATATCAAGTGT-TTGA--TCTGACCCCGAAAGTCAACCCAAG-CCGGGGCACATGTATTAATCAATTATCTG-AGAGC-G--CCTTTCTCGGCTCCCCATAGCATTAAAATTAGTCA--GAGACGTCATC----------G-GGCTCGCATCACAGAAT--GTCGTA---AAA------------CTTATCAAAATT-CAA--------A-------------------------AA--TGTTCA-ACATCAATT--TCTAGGCGAGAAAGTCGGAGCACAAAATGAAGCTGTTACT---GGTAGCCTTTCTGGC
droBip1 scf7180000396769:224191-224427 - TTC-------------------ACTTGAGACAAA---TA----TG-GTAT----AATAGTATACATCAAGTGT-TTGATGTCTGACCCCGAAAGTCAGTCCAAA-GCGAGGCATATGTATTAATCAATTATCTG-AGAGC-G--T----CTCC-----------------------------CCACGTCATC----------G-GGTTGGCATCACACAAT--GTCGTA---AAA------------CTTATCAAAATT-CAA--------A-------------------------AA--TGTTTA-ATATTAATT--TCTAGGCGAGAAAGTCGGAGCACAAAATGAAACTGTTTGT---GATAGCCTTTCTGGC
dp5 4_group4:5793035-5793276 - ATCTGTTGTTGCTGCAAAATCCACTC-AG-TAAA---TA----TT-ATA-----GAGAGCATA----TAGAGA-GCGA--GATGACCCC-AGA----------------GACAC----TTTAATTAATTACGAGGAAAGA-CAGTGCCTC---TCA-------------------------GACAC-TCTCT----------G-A-ATGGCACAACATCCC--AT--CA---AAAT-GGAATCGATTATAATCTAAACT-AAA--------A-------------------------AA--AGTTGA-CT--TAATTTCTGTAGGCGAGCGCTTTGGAGAACAATATGAGAGTGTTTCT---CGTAGCCCTGCTGGC
droPer2 scaffold_16:1117573-1117798 + AAA----------------TCCACTC-AG-TAAA---TA----TT-ATA-----GAGAGAATA----TAGAGA-GCGA--GATGACCCC-AGA----------------GACAC----TTTAATTAATTACGAGGAAAGA-CAGTGCCTC---TCA-------------------------GACAC-TCTCT----------G-A-ATGGCACAACATCCC--AT--CA---AAAT-GGAATCGATTATAATCTAAACT-AAA--------A-------------------------AA--TGTTGA-CT--TAATTTCTGTAGGCGAGCGCTTTGGAGAACAATATGAGAGTGTTTCT---CGTAGCCCTGCTGGC
droWil2 scf2_1100000004521:1680744-1680932 - ---------------------------------------------------------------------------------CTGACCCC-GGGATCGGGCGAAATGTATAACAT----TTAAATTAATTACGGA----GA-C--TTTTC----------------------------------GACGTCATCTTTCAGATTCT-A-----------------------------------AT---------CTTAAATT-CAA--------AATTTCAAACAAAAAATAAATAACAAAATGTTTTCA-----C-ATTTCAGTTGACT-GTGAGCTTTAGATGAAAATGAAGCTGTTTCTGTTGCTAGTCCTAGCGAC
droVir3 scaffold_12723:873216-873307 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATCTAAATT-CGAAAAAAAAA--------------------------AATAATTTTG-CTTTCTACT--TGCAGCGAAGAATTTTGGA----AATATGAAGCTGCTGTT---GGTAGCCCTGTTGGC
droGri2 scaffold_15252:4387187-4387272 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATCTAAATT-CGAAT--A---A-------------------------TA--TGTTTG-TTTTCTACT--TTTAGCTGAGAATTTTGGA----AATATGAAGCTACTATT---GGTAGCCCTATTGGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATC-------------------ACTTGAGATACA---TA----CTGATA-----TATAGTATA----AAGCGTTTCGA--TCTGACCCC-AGAGTCATCCGAAA-ATGCGACAC----TTTAATCAATTACGCG-AGAGC-G--TTCTCCTCATCA-------------------------GATACGTCATC----------G-AGTTGACATAACAATAT--AAAACA---GAAC-TGGATCGTGTGTAATCGAAATT-CAAATTCA---A-------------------------AA--TGCTTA-CTA-TAATT--TCCAGGCGAGAAAGTAGTTGATCAACATGAGACTGTTCCT---GCTAGCCCTGCTGGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................AGTTGATCAACATGAGACT........................1914.00404000000000000000
.........................................................................................................................................................................................................................................................................................................................................................ATGAGACTGTTCCT---GCTAGCC........2113.00303000000000000000
..........................................................................................................................................................................................................................................................................................................................................AAGTAGTTGATCAACATGAGACT........................2312.00202000000000000000
.......................................................................................................................................................................................................................................................................................................................................................ACATGAGACTGTTCCT---GCT............1912.00201000001000000000
........................................................................................................................................................................................................................................................................................................................................................CATGAGACTGTTCCT---GCT............1812.00202000000000000000
......................................................................................................................................................................................................................................................................................................................................GAGAAAGTAGTTGATCAACATGA............................2311.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................GTTGATCAACATGAGACT........................1811.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................ATCAACATGAGACTGTTCCT---GCTA...........2411.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................GTTCCT---GCTAGCCCTGCTG..1911.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................TAGTTGATCAACATGAGACTGT......................2211.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................GAGAAAGTAGTTGATCAACATGAGACT........................2711.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................AACATGAGACTGTTCCT---GCTAGCC........2411.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................ACATGAGACTGTTCCT---GCTAG..........2111.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................AACATGAGACTGTTCCT---GCT............2011.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................AGTTGATCAACATGAGACTGT......................2111.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TGAGACTGTTCCT---GCTAGCCCTGCTGGC2811.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................GTTGATCAACATGAGACTGG......................2011.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................AGTTGATCAACATGAGAC.........................1811.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................ATCAACATGAGACTGTTCCT---GCTAGC.........2611.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................ATGAGACTGTTCCT---GCTAGCCCTGCT...2611.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................ACATGAGACTGTTCCT---GCTAGCC........2311.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................AACATGAGACTGTTCCT---GCTAGCCC.......2511.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................................CAACATGAGACTGTTCCT---GCTAGC.........2411.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................GTAGTTGATCAACATGAGACT........................2111.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................GAGAAAGTAGTTGATCAACATGAGA..........................2511.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................ATCAACATGAGACTGTTCCT---...............2011.00101000000000000000
droSec2
ATC-------------------ACTTGAGATACA---TA----CTGATA-----TATAGTATA----AAGCGTTTCGA--TCTGACCCC-AGAGTCATCCGAAA-ATGCGACAC----TTTAATCAATTACGCG-AGAGC-G--TTCTCCTCATCA-------------------------GATACGTCATC----------G-AGTTGACATAACAATAT--AAAACA---GAAC-TGGATCGTGTGTAATCGAAATT-CAAATTCA---A-------------------------AA--TGCTTA-CTA-TAATT--TCCAGGCGAGAAAGTAGTTGATCAACATGAGACTGTTCCT---GCTAGCCCTGCTAGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................GTAGTTGATCAACATGAGACT........................2113.0031200
...........................................................................................................................................................................................................................................................................................................................................AGTAGTTGATCAACATGAGACT........................2213.0030210
.............................................................................................................................................................................................................................................................................................................................................TAGTTGATCAACATGAGACT........................2012.0021010
..........................................................................................................................................................................................................................................................................................................................................AAGTAGTTGATCAACATGAGACT........................2312.0021010
......................................................................................................................................................................................................................................................................................................................................GAGAAAGTAGTTGATCAACATGAG...........................2411.0010100
......................................................................................................................................................................................................................................................................................................................................GAGAAAGTAGTTGATCAACATGAGACT........................2711.0010010
.........................................................................................................................................................................................................................................................................................................................................................ATGAGACTGTTCCT---GCTAGC.........2011.0010100
....................................................................................................................................................................................................................................................................................................................................GCGAGAAAGTAGTTGATCAACATGAGACT........................2911.0010100
.....................................................................................................................................................................................................................................................................................................................................................CAACATGAGACTGTTCCT---GCTA...........2211.0011000
.........................................................................................................................................................................................................................................................................................................................................AAAGTAGTTGATCAACATGAGACT........................2411.0011000
.........................................................................................................................................................................................................................................................................................................................................................ATGAGACTGTTCCT---GCTAGCCCTT.....2411.0011000
............................................................................................................................................................................................................................................................................................................................................................AGACTGTTCCT---GCTAGCCCTGCTAG.2511.0010100
dm3
ATC-------------------ACTTGAGATACA---TA----CTGATATATAGTATAGTATA----AAGCGTTTCGA--TCTGACCCC-AGAGTCATCCGAAA-ATGCGACAT----TTTAATCAATTACGCG-AGAGC-G--TTCTCCTCATCA-------------------------GATACGTCATC----------G-AGTTGACATAACAACAT--AAAGCA---GAAC-TGGATCGTGTGTAATCGAAATT-CAAAAAAAAAA-------------AAAAAAAAAACAAAA--TGCTTA-CTA-TATTT--TCCAGGCGCGAAAGTAGTTGATCAACATGAGACTGTTTCT---GCTAGCCCTGCTGGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................AAGCA---GAAC-TGGATC......................................................................................................................................15186.0086000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001670000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................GTTGATCAACATGAGACTGT......................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................AGTAGTTGATCAACATGAGACT........................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................................................................................AAAAAAAAAA-------------AAAAAAAAAACAAAA--............................................................................25201.302600000000000000000000000000000000000210000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001000000000010000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AAAAA-------------AAAAAAAAAACAAAA--TGCT........................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................AGTTGATCAACATGAGACTGTTTCT---...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................AAAA--TGCTTA-CTA-TATTT--T.........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TTCGA--TCTGACCCC-AGAGT..........................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................AGACTGTTTCT---GCTAGCCCTGCT...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................GTTGATCAACATGAGACTGTTTCT---...............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................AGTAGTTGATCAACATGAG...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................T--AAAGCA---GAAC-TGGATCGTGT..................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AACAACAT--AAAGCA---GAAT-............................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................CAACATGAGACTGTTTCT---GC.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................CA---GAAC-TGGATCGTGTGTAATCGAA.........................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................AAGTAGTTGATCAACATGAGACTGTTTC...................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................CATAACAACAT--AAAGCA---GAAC-TGG.........................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TGATATATAGTATAGTATA----AAGCGTTTC.............................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................AAGCGTTTCGA--TCTGACCCC-A..............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................ATCAACATGAGACTGTTTCT---GCTAGC.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................GTTGATCAACATGAGACTGTTT....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................................................................................AACATGAGACTGTTTCT---GCTAG..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TACGTCATC----------G-AGTTGACAT....................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGAGATACA---TA----CTGATATATAGT..................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................AAAAAAAAA-------------AAAAAAAAAACAAAA--............................................................................24200.4590000000000000000000000000000000000020000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000000000000000000000010201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................AAAAAA-------------AAAAAAAAAACAAA...............................................................................20200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000010000000000000000000000000000020000000000000000000000000000000000000000000000000000030000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................AAAAAAA-------------AAAAAAAAAACAAAA--............................................................................22200.3570000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000030000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................AAAAAAAAA-------------AAAAAAAAAACAAA...............................................................................23200.3570000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................AAAAAAAAAA-------------AAAAAAAAAACAAAA--T...........................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................AAAAAAAAAA-------------AAAAAAAAAACAAA...............................................................................24200.3060000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................AAAAAAA-------------AAAAAAAAAACA.................................................................................19200.2550000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................AAAA-------------AAAAAAAAAACAAAA--TG..........................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................AAAAAAA-------------AAAAAAAAAACAAA...............................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................AAAAAAAA-------------AAAAAAAAAACAAAA--............................................................................23200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................CAAAAAAAAAA-------------AAAAAAAAAA...................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................CAAAAAAAAAA-------------AAAAAAAAAAC..................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................AAAAAAAAAA-------------AAAAAAAAAACA.................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................AAAAAAAA-------------AAAAAAAAAACAA................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................AAAAAAAAA-------------AAAAAAAAAACA.................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................AAAAAAAAA-------------AAAAAAAAAACAA................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GAAATT-CAAAAAAAAAA-------------AA...........................................................................................1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................AATT-CAAAAAAAAAA-------------AAAAAAAAA....................................................................................2480.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................AAAAAA-------------AAAAAAAAAACAAAA--............................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TT-CAAAAAAAAAA-------------AAAAAAAAA....................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TT-CAAAAAAAAAA-------------AAAAAAAAAA...................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................T-CAAAAAAAAAA-------------AAAAAAAAA....................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................CAAAAAAAAAA-------------AAAAAAAA.....................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................T-CAAAAAAAAAA-------------AAAAAAAAAA...................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................CAAAAAAAAAA-------------AAAAAAAAA....................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AAAAA-------------AAAAAAAAAACAAAA--............................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATC-------------------ACTTAAGATACG---TATATGTAGATA-----TATAGTATA----AAGCCTTTCGA--TCTGACCCC-AGAGTCATCCCCAA-ATGAGAC------TTTAATCATTTGTGCG-AGAGCAGAAGAACGC---TCA-------------------------GATACGTCATC----------G-AATTGACATAACGAC------------------TGGAACGAGTGTAATTGAAATT-CAA--------A-------------------------AA--TGCTTA-ATC-AAATT--TCCAGGCGAGAAAGTTGTTGCTCACTATGAGACTGTTTTT---GCTAGCCCTGTTGGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................CACTATGAGACTGTTTTT---GCTA...........2212.0021000010
.............................................................................................................................................................................................................................................................................................................................................................GACTGTTTTT---GCTAGCCCTGTTG..2312.0022000000
..............................................................................................................................................................................................................................................................................................................................................................ACTGTTTTT---GCTAGCCCTGT....2012.0020000200
.........................................................................................................................................................................................................................................................................................................................................................ATGAGACTGTTTTT---GCTAGCCC.......2211.0010000100
..............................................................................................................................TTTGTGCG-AGAGCAGAAGAACGC---TCA-------------------------A...................................................................................................................................................................................................2711.0010000100
..........................................................................................................................................................................................................................................................................................................................................AAGTTGTTGCTCACTATGAGA..........................2111.0010000010
............................................................................................................................................................................................................................................................................................................................................GTTGTTGCTCACTATGAGACTGT......................2311.0011000000
..........................................................................................................................ATCATTTGTGCG-AGAGCAGA..........................................................................................................................................................................................................................................2011.0010000100
.......................................................................................................................................................................................................................................................................................................................................................CTATGAGACTGTTTTT---GCT............1911.0011000000
........................................ATGTAGATA-----TATAGTATA----AAGCCTTTCG............................................................................................................................................................................................................................................................................................................2811.0010000100
.....................................................................................................................................................................................................................................................................................................................................CGAGAAAGTTGTTGCTCACTATGAGA..........................2611.0011000000
.........................................................................................................................................................................................................................................................................................................................................................ATGAGACTGTTTTT---GCTAGCCCTGTTGG.2811.0010000100
...............................................................................................................................................................................................................................................................................................................................................................CTGTTTTT---GCTAGCCCTGTTGGC2311.0011000000
......................................................................................................................................................................................................................................................................................................................................................ACTATGAGACTGTTTTT---G..............1811.0010100000
.............................................................................................................................................................................................................ATTGACATAACGAC------------------TGGAACGAGTGTA...............................................................................................................................2711.0011000000
...........................................................................................................................................................................................................................................................................................................................TT--TCCAGGCGAGAAAGTTGTTG......................................2211.0010000100
.....................................................................................................................................................................................................................................................................................................................................................CACTATGAGACTGTTTTT---GCTAG..........2311.0010000010
................................................................................................................................................................................................................GACATAACGAC------------------TGGAACGAGTGTAAT.............................................................................................................................2611.0010000100
droYak3
ATC-------------------ACTTGAGATACA---TA----CAGATA-----TATAGTATA----GGGCGTTTCGA--TCAGACCCC-AGAGTCATCCGAAA-ATGAGACAT----TTTAATCTATTGCGCG-AGAGC-G--TTCTACTCATCA-------------------------GATACATCATC----------G-AATTGACATAACAAC------------------TGGAATGAATGTAATCGAAATT-CAA--------A-------------------------AA--TGCTTA-CTT-TAATT--TCCAGGCGAGAAAGTTGCTTCTCAACATGAGACTGTTTTT---GCTAGCCCTGCTGGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................CAACATGAGACTGTTTTT---GCTAGCCCT......2712.00211000000000
................................................................................................................................................................................................................................................................................................................TTA-CTT-TAATT--TCCAGGCGAG................................................2111.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................GACTGTTTTT---GCTAGCCCTGCTGGC2511.00100100000000
......................................................................................................................TTTAATCTATTGCGCG-AGAGC-G--TTCTACT..................................................................................................................................................................................................................................2911.00100000010000
...................................................................................................................................................................................................................................................................................................................................................CTCAACATGAGACTGTTTTT---GCT............2311.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................CAACATGAGACTGTTTTT---GCTAGCCCTGCT...3011.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................CAACATGAGACTGTTTTT---GCTAGCCCTG.....2811.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................CAACATGAGACTGTTTTT---GCT............2111.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................ATGAGACTGTTTTT---GCTAGCCC.......2211.00100100000000
........................................................................................................................................................................................................................................................................................................................................................CATGAGACTGTTTTT---GCTAGCCCTGCT...2711.00100100000000
......................................................................................................................................................................................................................................................................................................................................................AACATGAGACTGTTTTT---GCT............2011.00110000000000
......................................................................................................................................................................................................................................................................................................................................................AACATGAGACTGTTTTT---G..............1811.00101000000000
........................................................................................................................................................................................................................................................................................................................................................CATGAGACTGTTTTT---GCTAGC.........2111.00100000010000
................................................A-----TATAGTATA----GGGCGTTTC.............................................................................................................................................................................................................................................................................................................1911.00100000010000
droEug1
ATC-------------------ACTTGAGACACA---TA----TTGACT-----TATAGTATA----AAGCGTGTCGA--TCTGACCCC-AGAGTCATCTGAAA-ATGAGACAT----TTTAATCAATTACGCG-AGAGA-C--TTCGTCTCGGCACACTGAAATATC----------A--GCTACGTCATC----------G-AATTGGCATAACAACAT--GTCGTA---GAAA-TGGAACGAGTCTAATCAAAATT-CAA--------A-------------------------AA--TGTTCTACTA-TAATT--TCTAGGCGAGAAAGTTGGAGATCAATATGAAACTAACGCT---AGTATTTCTGCTGGCSizeHit CountTotal NormTotal
No Reads
droBia1
ATT-------------------AATTGGGATGCA---T----------A-----TATAGTATA----AAGCGTGTCGA--TCTGACCCC-AGAGTCATTTGAAA-ATGAAACAT----TTTTATTAATTACGCG-AGAGA-C--T-CGCGTTGACACACTGAAATATCA-TATCAGATA--TATACGTCATC----------AGAATTAGCAT------------------------TGAACCGAGTCTAATCAAAATT-CAG--------A-------------------------AA--TGCTCA-CTA-TAATT--TCCAGG-----AAGTTGTAACTCAATATGAGACTGTTTCT---GGTGGTGCTGCTGGCSizeHit CountTotal NormTotal
No Reads
droTak1
ATC-------------------AATTGATATAAAGAGTA----CATATA-----TATAGTATA----AAGCGTGTCGA--TCTGACCCC-AGAGTCATACGAAAAATGAGACAT----TTTAATCAATTACGCG-AGAGA-C--TTCGTCTCGACA-------------------------GATACGTCATC----------GAAATTGGCATAACAAGAT--GTCGTA---GAA----------TTCTGATAGAAATTTGAA--------A-------------------------AA--TGCTTA-CTA-TAATT--TCCAGGCGAGAAAGTTCGAGCTGAAAATGAGACTGTTTCTTCTGGCTGCCCTGCTGGCSizeHit CountTotal NormTotal
No Reads
droEle1
TTC-------------------ACTGCAG-TATA---TA----TA-GTA-----TATAGTATA----TGGCGTGTCGA--TCTGACCCC-AAAGTCATCCGAAA-ATGAGACAT----TTTAATCAATTACGCG-GGAGA-C--CTCATCTCGGCACAC------------------------TACGTCATC----------G-AATTGGCATAACAACAT--GTCGAATAGGAAT-AGGAACGAGTCTAATCAAAATT-CAA--------A-------------------------AA--TGCTTA-CTA-TAATT--TCCAGGCGAGAAAGTTGGATCTCAATATGAGACTGTTTCT---GCTAGCCCTGCTGGCSizeHit CountTotal NormTotal
No Reads
droRho1
TTC-------------------ACAGCAG-----------------TTC-----TATAGTATA----CAGCGTGTCGA--TCTGACCCC-AGAGTCATCCGAAA-ATGAGACAT----TTTAATCAATTACGCG-AGTGA-C--TTGATCTCGACACACTGAAAGATC----------G--GCGACGTCATC----------G-AATTGGCATAACAACATGTGTCGTA---GAAT-TGGATCGTGTCTAATCAAAATT-CAA--------A-------------------------AA--TGCTTA-CTA-TAATT--TCCAGGCGAGAAAGTCGGAGCTCAATATGAGACTGTTTCT---GATAGTACTGCTGGCSizeHit CountTotal NormTotal
No Reads
droFic1
CTT-------------------ACTTGAGG-----------------TA-----TATAGTATA----TATCGTGCCGA--TCTGACCCC-AGAGTCATCCGAAA-ATGAGACAT----ATTAATCAATTGCGCG-AGAGA-C--TTCGCTGCGACAAACTGATAAATC----------A--GATACGTCATC----------G-AATTGGCGTAACAAACT--GTCGTA---GAAT-TGGAACGATTCTAATAAAAATT-CAA----------------------------------AA--TGCTTT-CTA-TAATT--CCCAGGCGAGAAAGTTG-ATCACAAAATGAGACTGTTACT---GGTAGCCCTGCTGGCSizeHit CountTotal NormTotal
No Reads
droKik1
-TC-------------------ACTTGAGAATC---------------------TTTGGCAGT----ATGTGTGCCGA--TCTGACCCC-AGAGTCATCAGAAC-ATGAGACAT----TTTAATCAATTAAGGGGAGAGA-C--TGACTCTCAGCAGAATGAA--------ATTAGATCTATGTACGTCATC----------G-AATTGCCATTATAACGT--GTCATA---GAATTGTGATAGAT-----TCTAAATT-CAA--------A-------------------------AA--TGCTAA-CTA-AACTT--TCCAGGCAACAAATTTGGCGCATAAAATGAGGCTGTTCCT---CGTAGCACTCCTTGCSizeHit CountTotal NormTotal
No Reads
droAna3
GGT-------GCTTCACT-TTCACTTGAGACAAA---TA----TG-G-------TATAGTATATATCAAGTGT-TTGA--TCTGACCCCGAAAGTCAACCCAAG-CCGGGGCACATGTATTAATCAATTATCTG-AGAGC-G--CCTTTCTCGGCTCCCCATAGCATTAAAATTAGTCA--GAGACGTCATC----------G-GGCTCGCATCACAGAAT--GTCGTA---AAA------------CTTATCAAAATT-CAA--------A-------------------------AA--TGTTCA-ACATCAATT--TCTAGGCGAGAAAGTCGGAGCACAAAATGAAGCTGTTACT---GGTAGCCTTTCTGGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................GAGAAAGTCGGAGCACAAAATGAAGCT........................2714.004000040
......................................................................................................................................................................................................................................................................................................................................GAGAAAGTCGGAGCACAAAATGAAGC.........................2613.003000120
..................................................................................................................................................................................................................................................................................................................................................GCACAAAATGAAGCTGTTACT---GGTAGC.........2712.002000020
............................................................................................................................................................................................................................................................................................................................................GTCGGAGCACAAAATGAAGCT........................2112.002100010
.....................................................................................................................................................................................................................................................................................................................................................CAAAATGAAGCTGTTACT---GGTAGC.........2412.002000020
...........................................................................................................................................................................................................................................................................................................................................AGTCGGAGCACAAAATGAA...........................1912.002100010
......................................................................................................................................................................................................................................................................................................................................................AAAATGAAGCTGTTACT---GGTAGC.........2312.002100010
.....................................................................................................................................................................................................................................................................................................................................................CAAAATGAAGCTGTTACT---GGC............2111.001010000
........................................................................................................................................................................................................................................................................................................................................GAAAGTCGGAGCACAAAATGAAGCT........................2511.001000010
.................................................................................................................................................................................................................................................................................................................................................................GTTACT---GGTAGCCTTTCTGGC2111.001100000
......................................................................................................................................................................................................................................................................................................................................................AAAATGAAGCTGTTACT---GGTAGCC........2411.001100000
.............................................................................................................................................................................................................................................................................................................................................TCGGAGCACAAAATGAAGCT........................2011.001100000
..........................................................................................................................................................................................................................................................................................................................................................TGAAGCTGTTACT---GGTAGCCTTTCTG..2611.001100000
............................................................................................................................................................................................................................................................................................................................................GTCGGAGCACAAAATGAAGCTGTTA....................2511.001100000
..................................................................................................................................................................................................................................................................................................................................................GCACAAAATGAAGCTGTTACT---GGT............2411.001010000
........................................................................................................................................................................................................................................................................................................................................................AATGAAGCTGTTACT---GGTAGC.........2111.001000100
...........................................................................................................................................................................................................................................................................................................................................AGTCGGAGCACAAAATGAAGC.........................2111.001000010
.............................................................................................................................................................................................................................................................................................................................................................AGCTGTTACT---GGTAGCCTTTCTGG.2411.001100000
...................................................................................................................................................................................................................................................................................................................................................CACAAAATGAAGCTGTTACT---G..............2111.001000010
.....................................................................................................................................................................................................................................................................................................................................................CAAAATGAAGCTGTTACT---GGTA...........2211.001010000
.......................................................................................................................................................................................................................................................................................................................................................AAATGAAGCTGTTACT---GGT............1911.001000010
..............................................................................................................................................................................................................................................................................................................................................CGGAGCACAAAATGAAGCTGTTACT---G..............2611.001000010
........................................................................................................................................................................................................................................................................................................................................................AATGAAGCTGTTACT---GGT............1811.001010000
......................................................................................................................................................................................................................................................................................................................................................AAAATGAAGCTGTTACT---GGT............2011.001000001
..............................................................................................................................................................................................................................................................................................................................................CGGAGCACAAAATGAAGCTGTTACT---...............2511.001100000
......................................................................................................................................................................................................................................................................................................................................GAGAAAGTCGGAGCACAAA................................1911.001000001
.......................................................................................................................................................................................................................................................................................................................................................AAATGAAGCTGTTACT---GGTA...........2011.001000001
droBip1
TTC-------------------ACTTGAGACAAA---TA----TG-GTAT----AATAGTATACATCAAGTGT-TTGATGTCTGACCCCGAAAGTCAGTCCAAA-GCGAGGCATATGTATTAATCAATTATCTG-AGAGC-G--T----CTCC-----------------------------CCACGTCATC----------G-GGTTGGCATCACACAAT--GTCGTA---AAA------------CTTATCAAAATT-CAA--------A-------------------------AA--TGTTTA-ATATTAATT--TCTAGGCGAGAAAGTCGGAGCACAAAATGAAACTGTTTGT---GATAGCCTTTCTGGCSizeHit CountTotal NormTotal
No Reads
dp5
ATCTGTTGTTGCTGCAAAATCCACTC-AG-TAAA---TA----TT-ATA-----GAGAGCATA----TAGAGA-GCGA--GATGACCCC-AGA----------------GACAC----TTTAATTAATTACGAGGAAAGA-CAGTGCCTC---TCA-------------------------GACAC-TCTCT----------G-A-ATGGCACAACATCCC--AT--CA---AAAT-GGAATCGATTATAATCTAAACT-AAA--------A-------------------------AA--AGTTGA-CT--TAATTTCTGTAGGCGAGCGCTTTGGAGAACAATATGAGAGTGTTTCT---CGTAGCCCTGCTGGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................GAACAATATGAGAGTGTTTCT---CGT............2411.0010100000000
..........................................................................................................................................................................................................................................................................................................................................GCTTTGGAGAACAATATGA............................1911.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................CAATATGAGAGTGTTTCT---C..............1911.0010100000000
................................................................................................................................................................................................................................T--CA---AAAT-GGAATCGATTATAAT.............................................................................................................................2211.0010100000000
...................................................................................................................................................................................................................................................................................................................................................AACAATATGAGAGTGTTTCT---CGTA...........2411.0010000100000
..........................................................................................................................................................................................................................................................................................................................ATTTCTGTAGGCGAGCGCTTTGGAG......................................2511.0010100000000
........................................................................................................................................................................................................................................................................................................................TAATTTCTGTAGGCGAGCGT.............................................2011.0010000000010
droPer2
AAA----------------TCCACTC-AG-TAAA---TA----TT-ATA-----GAGAGAATA----TAGAGA-GCGA--GATGACCCC-AGA----------------GACAC----TTTAATTAATTACGAGGAAAGA-CAGTGCCTC---TCA-------------------------GACAC-TCTCT----------G-A-ATGGCACAACATCCC--AT--CA---AAAT-GGAATCGATTATAATCTAAACT-AAA--------A-------------------------AA--TGTTGA-CT--TAATTTCTGTAGGCGAGCGCTTTGGAGAACAATATGAGAGTGTTTCT---CGTAGCCCTGCTGGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................................CGCTTTGGAGAACAATATGAGA..........................2211.001010000
........................................................................................................................................................................................................................................................................................................................................GCGCTTTGGAGAACAATATGAG...........................2211.001000001
..........................................................................................................................................................................................................................................................................................................................................GCTTTGGAGAACAATATGAGA..........................2111.001010000
.......................................................................................................................................................................................................................................................................................................................................AGCGCTTTGGAGAACAATATGAG...........................2311.001001000
droWil2
---------------------------------------------------------------------------------CTGACCCC-GGGATCGGGCGAAATGTATAACAT----TTAAATTAATTACGGA----GA-C--TTTTC----------------------------------GACGTCATCTTTCAGATTCT-A-----------------------------------AT---------CTTAAATT-CAA--------AATTTCAAACAAAAAATAAATAACAAAATGTTTTCA-----C-ATTTCAGTTGACT-GTGAGCTTTAGATGAAAATGAAGCTGTTTCTGTTGCTAGTCCTAGCGACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................TTTAGATGAAAATGAAGCT........................1916.00602310
...............................................................................................................................................................................................................................................................................................................................................TTAGATGAAAATGAAGCTGTTTCT..................2413.00300300
...................................................................................................................................................................................................................................................................................................................................GACT-GTGAGCTTTAGATGAAAAT..............................2313.00302010
..............................................................................................................................................................................................................................................................................................................................................TTTAGATGAAAATGAAGCTGTTTCT..................2513.00301110
..............................................................................................................................................................................................................................................................................................................................................TTTAGATGAAAATGAAGCTGTTTCTGT................2713.00300210
...................................................................................................................................................................................................................................................................................................................................................................TTCTGTTGCTAGTCCTAGC...1912.00202000
................................................................................................................................................................................................................................................................................................................................................TAGATGAAAATGAAGCTGTTTCTGT................2512.00200200
................................................................................................................................................................................................................................................................................................................................................................TGTTTCTGTTGCTAGTCCTAGC...2212.00202000
..................................................................................................................................................................................................................................................................................................................................................GATGAAAATGAAGCTGTTTCTGT................2312.00200200
..................................................................................................................................................................................................................................................................................................................................................GATGAAAATGAAGCTGTTTCTGTTGCT............2712.00201100
......................................................................................................................................................................................................................................................................................................................................T-GTGAGCTTTAGATGAAAATGAAG..........................2412.00201100
.....................................................................................................................................................................................................................................................................................................................................CT-GTGAGCTTTAGATGAAAATGA............................2311.00100100
..................................................................................................................................................................................................................................................................................................................................................GATGAAAATGAAGCTGTTT....................1911.00100100
...................................................................................................................................................................................................................................................................................................................................................ATGAAAATGAAGCTGTTTCTGTTGCT............2611.00100010
...............................................................................................................................................................................................................................................................................................................................................TTAGATGAAAATGAAGCTGTTT....................2211.00100100
....................................................................................................................................................................................................................................................................................................................................................TGAAAATGAAGCTGTTTCTGTTGCT............2511.00110000
....................................................................................................................................................................................................................................................................................................................................................................TCTGTTGCTAGTCCTAGC...1811.00110000
.................................................................................................................................................................................................................................................................................................................................................................GTTTCTGTTGCTAGTCCTA.....1911.00101000
...................................................................................................................................................................................................................................................................................................................................................ATGAAAATGAAGCTGTTTCTGTTGC.............2511.00101000
...............................................................................................................................................................................................................................................................................................................................................TTAGATGAAAATGAAGCTGTTTCTG.................2511.00101000
................................................................................................................................................................................................................................................................................................................................................TAGATGAAAATGAAGCTGTTTCT..................2311.00100100
......................................................................................................................................................................................................................................................................................................................................T-GTGAGCTTTAGATGAAAAT..............................2011.00100100
.................................................................................................................................................................................................................................................................................................................................................................GTTTCTGTTGCTAGTCCTAGCGA.2311.00100010
.................................................................................................................................................................................................................................................................................................................................................AGATGAAAATGAAGCTGTTTCTGTTG..............2611.00100100
..............................................................................................................................................................................................................................................................................................................................................TTTAGATGAAAATGAAGCTGTTTCTG.................2611.00100100
..................................................................................................................................................................................................................................................................................................................................................GATGAAAATGAAGCTGTTTCTGTTG..............2511.00100100
..............................................................................................................................................................................................................................................................................................................................................TTTAGATGAAAATGAAGC.........................1811.00100010
......................................................................................................................................................................................................................................................................................................................................................AAAATGAAGCTGTTTCTGTTGCT............2311.00100100
...................................................................................................................................................................................................................................................................................................................................GACT-GTGAGCTTTAGATGAAAATGAAG..........................2711.00101000
........................................................................................................................................................................................................................................................................................................................................GTGAGCTTTAGATGAAAAT..............................1911.00100010
..............................................................................................................................................................................................................................................................................................................................................TTTAGATGAAAATGAAGCTGTTT....................2311.00100010
...............................................................................................................................................................................................................................................................................................................................................TTAGATGAAAATGAAGCT........................1811.00100010
...........................................................................................................................................................................................................................................................................................................................................................GAAGCTGTTTCTGTTGCTAGTCCTA.....2511.00101000
..................................................................................................................................................................................................................................................................................................................................................GATGAAAATGAAGCTGTTTCT..................2111.00100100
...............................................................................................................................................................................................................................................................................................................................................TTAGATGAAAATGAAGCTGTTTCTGTTGC.............2911.00101000
.......................................................................................................................................................................................................................................................................................................................................................AAATGAAGCTGTTTCTGTTGCTA...........2311.00100100
.................................................................................................................................................................................................................................................................................................................................TTGACT-GTGAGCTTTAGAT....................................1920.50100100
droVir3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATCTAAATT-CGAAAAAAAAA--------------------------AATAATTTTG-CTTTCTACT--TGCAGCGAAGAATTTTGGA----AATATGAAGCTGCTGTT---GGTAGCCCTGTTGGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................TTTGGA----AATATGAAGCTGCTGTT---GGT............2615.005002000000000000000001000000000000000000000000000000000000000020
......................................................................................................................................................................................................................................................................................................................................................AATATGAAGCTGCTGTT---GGTA...........2115.005001000000000000000000000000000000000000000000000000000000000040
......................................................................................................................................................................................................................................................................................................................................................AATATGAAGCTGCTGTT---GGT............2014.004001000000000000000000000000000000000000000000000000000000000030
............................................................................................................................................................................................................................................................................................................................................TTTGGA----AATATGAAGCTGCTGTT---...............2313.003000200000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................ATATGAAGCTGCTGTT---GGTAG..........2112.002001000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................TTTGGA----AATATGAAGCTG.......................1812.002000000000000000002000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................ATATGAAGCTGCTGTT---GGTA...........2012.002001000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................AATATGAAGCTGCTGTT---GGTAG..........2212.002000000000000000000000000000000000000000000000000000000000000020
..........................................................................................................................................................................................................................................................................................................................................ATTTTGGA----AATATGAAGCTGCTGTT---...............2511.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................TTGGA----AATATGAAGCTGCTGTT---...............2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TTGGA----AATATGAAGCTGCTGTT---GGTAGC.........2811.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................ATTTTGGA----AATATGAAGCTGCTGTT---GGT............2811.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................GA----AATATGAAGCTGCTGTT---GGTAG..........2411.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................GGA----AATATGAAGCTGCTGTT---...............2011.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................ATATGAAGCTGCTGTT---GGTAGC.........2211.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TTTGGA----AATATGAAGCTGCTGTT---GGTA...........2711.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................ATATGAAGCTGCTGTT---GGT............1911.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................TGCTGTT---GGTAGCCCTGTT...1911.001000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TTTGGA----AATATGAAGCTGCTGTT---GG.............2511.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................AATATGAAGCTGCTGTT---GG.............1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................ATGAAGCTGCTGTT---GGTA...........1811.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................AATATGAAGCTGCTGTT---GGTAGC.........2311.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................ATGAAGCTGCTGTT---GGTAGCCCTGTTG..2711.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................AGAATTTTGGA----AATATGAAGCTGCT.....................2511.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AGAATTTTGGA----AATATGAAG..........................2011.001000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TTTTGGA----AATATGAAGCTGCTGTT---GGT............2711.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................................ATGAAGCTGCTGTT---GGTAGCCCT......2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AGAATTTTGGA----AATATGAAGCC........................2220.501000100000000000000000000000000000000000000000000000000000000000
droGri2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATCTAAATT-CGAAT--A---A-------------------------TA--TGTTTG-TTTTCTACT--TTTAGCTGAGAATTTTGGA----AATATGAAGCTACTATT---GGTAGCCCTATTGGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................................................................................................................................................................................................................................................ATTTTGGA----AATATGAAGCTA.......................2011.00101

Generated: 05/18/2015 at 12:04 PM