ID:

dsi_30498

 Coordinate:

2r:683595-683744 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.4 -2.6

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+
mature
  1. dsi_30498  2r:683624-683648 +
  2. dsi_11474  2r:1373081-1373105 +
star
  1. 2l:21822341-21822357 +
  2. 2l:22279212-22279228 -
  3. 2l:22614695-22614711 +
  4. 2l:22735623-22735639 +
  5. 2r:138488-138504 -
  6. dsi_30498  2r:683599-683615 +
  7. 2r:1051195-1051211 -
  8. 2r:1117361-1117377 -
  9. 2r:1212888-1212904 +
  10. dsi_11474  2r:1373056-1373072 +
  11. 2r:1913379-1913395 -
  12. 2r:3206224-3206240 +
  13. 3l:22593348-22593364 +
  14. 3l:22825794-22825810 -
  15. 4:318744-318760 -
  16. 4:802858-802874 -
  17. 4:924524-924540 -
  18. x:20608136-20608152 -

Sense Strand Reads

CACTTTTGAACAATTTTTTTTTCTCATTTTATTCCCCTGTATCTGTTGATATTCCAGAAAAATGATAAAATATTTCGCGTTCGCATTGAGTAACGGGTATCTCATAGTCGGGTACTCTCTTGTTTCAATTTTATTGTTTTTCTTGCCCATTTGTACATAGGCCATCAGTTCTGCACAACTAAAGCTTCTCTTAATTTTAGGTTCACTGGAGCACACAAATAAACGGATTGTTCGTGATGTAATTGTAAAC
******************************************************.......................((((.((.....)))))).........************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR553487
NRT_0-2 hours eggs
 M023
head
 M025
embryo
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 O002
Head
 SRR553488
RT_0-2 hours eggs
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
....................................................................................................................................................................................................................ACACAAATAAACGGATTG.................... 18 0 2 2.00 4 2 0 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ACACAAATAAACGGATTGTTC................. 21 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................TTCGCGTTCGCACTGAGTAACTGGT........................................................................................................................................................ 25 2 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ACACAAATAAACGGATTGTTCGT............... 23 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TCACTGGAGCACACAAATAAACGGAT...................... 26 0 2 1.00 2 0 0 0 0 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CACAAATAAACGGATTGTTC................. 20 0 2 1.00 2 1 0 0 1 0 0 0 0 0 0 0 0
...............................TTCCCCTGTATCTGTTGATATTCCAGA................................................................................................................................................................................................ 27 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................ACTGGAGCACACAAATAAACGGATTGTT.................. 28 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................TTCGCATTGAGTAACGGGTATCTCA.................................................................................................................................................. 25 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................TTCGCGTTCGCACTGAGTAACTGGTATA..................................................................................................................................................... 28 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CACACAAATAAACGGATT..................... 18 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................GTATCTGTTGATATTCCA.................................................................................................................................................................................................. 18 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................AATAAACGGATTGTTCGT............... 18 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................TTTCGCGTTCGCACTGAGTAACTGGT........................................................................................................................................................ 26 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................TGAGTAACGGGTATCTCATAGTCGG........................................................................................................................................... 25 0 6 0.33 2 0 0 0 0 0 1 0 0 0 0 0 1
.........................................TATGTTGATATGCCAGAAAAATGT......................................................................................................................................................................................... 24 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0
.........................................TCTGTTGATCTTTCAGGAAAA............................................................................................................................................................................................ 21 3 9 0.22 2 0 1 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................TTATTGATTGTCTTGCCCATTTGTA............................................................................................... 25 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................GAGTAACGGGTATCTCATAGTCG............................................................................................................................................ 23 0 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................GTAACGGGTATCTCATAGT.............................................................................................................................................. 19 0 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................TATTGATTGTCTTGCCCATTTGTA............................................................................................... 24 2 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................CTGTACCTGTTGATA....................................................................................................................................................................................................... 15 1 9 0.11 1 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................TGAGTAACGGGTATCTCATAGTCGGT.......................................................................................................................................... 26 1 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................TGAGTAACGGGTATCTCATAGTCGGGC......................................................................................................................................... 27 1 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................................TCCGCAACTAAAGCTTCACT........................................................... 20 3 14 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................CAGAAAAATGATAAAAT................................................................................................................................................................................... 17 0 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................TGAGTAACGGGTATCTCATAGTCGCT.......................................................................................................................................... 26 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................ATACTCCAGAATATTGATA....................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................TTTATTCCCTGGTGTCTGT............................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

GTGAAAACTTGTTAAAAAAAAAGAGTAAAATAAGGGGACATAGACAACTATAAGGTCTTTTTACTATTTTATAAAGCGCAAGCGTAACTCATTGCCCATAGAGTATCAGCCCATGAGAGAACAAAGTTAAAATAACAAAAAGAACGGGTAAACATGTATCCGGTAGTCAAGACGTGTTGATTTCGAAGAGAATTAAAATCCAAGTGACCTCGTGTGTTTATTTGCCTAACAAGCACTACATTAACATTTG
**************************************************************************************************************************************************.......................((((.((.....)))))).........****************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR902009
testis
 SRR618934
dsim w501 ovaries
.........................................................................AAGCGCAAGCGTGACTCATTGAC.......................................................................................................................................................... 23 2 2 13.50 27 15 11 1 0 0 0 0
........................................................................AAAGCGCAAGCGTTACTCATTGAC.......................................................................................................................................................... 24 2 2 5.50 11 5 4 1 1 0 0 0
.........................................................................AAGCGCAAGCGTTACTCATTGAC.......................................................................................................................................................... 23 2 2 4.50 9 5 4 0 0 0 0 0
................................AGGGGACATAGACAACTATAAGGT.................................................................................................................................................................................................. 24 0 2 3.00 6 4 1 0 1 0 0 0
.........................................................................AAGCGCAAGCGTGACTCATTGACC......................................................................................................................................................... 24 2 2 1.00 2 2 0 0 0 0 0 0
.........................................................................AAGCGCAAGCGTGACTCATTGACCA........................................................................................................................................................ 25 2 2 1.00 2 2 0 0 0 0 0 0
...............................AAGGGGACATAGACAACTATAAGGT.................................................................................................................................................................................................. 25 0 2 1.00 2 1 1 0 0 0 0 0
.........................................................................AAGCGCAAGCGTTACTCATTGACC......................................................................................................................................................... 24 2 2 1.00 2 1 1 0 0 0 0 0
................................................TATAAGGTCTTTTTACT......................................................................................................................................................................................... 17 0 14 0.64 9 0 0 4 5 0 0 0
..................................GGGACATAGACAACTATAAGGT.................................................................................................................................................................................................. 22 0 2 0.50 1 1 0 0 0 0 0 0
.......................................................................GAAAGCGCAAGCGTGACTCATTGAC.......................................................................................................................................................... 25 3 2 0.50 1 1 0 0 0 0 0 0
.............................................................................................................................................................ATCCGGTAGTCAAGACGTGTTGATTT................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0
..........................................................................AGCGCAAGCGTTACTCATTGACCA........................................................................................................................................................ 24 2 2 0.50 1 1 0 0 0 0 0 0
...............................AGGGGGACATAGACAACTATAAGGT.................................................................................................................................................................................................. 25 1 2 0.50 1 0 1 0 0 0 0 0
...........................................................................GCGCAAGCGTTACTCATTGACCA........................................................................................................................................................ 23 2 2 0.50 1 0 1 0 0 0 0 0
..........................................................................AGCGCAAGCGTGACTCATTGACCATAGA.................................................................................................................................................... 28 2 2 0.50 1 0 0 1 0 0 0 0
.........................................................................AAGCGCAAGCGTTACTCATTGACCA........................................................................................................................................................ 25 2 2 0.50 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................GACCTCCTGTGTTTATTTGCCTAACAA.................. 27 1 2 0.50 1 0 0 1 0 0 0 0
......................................................................AGAAAGCGCAAGCGTGACTCATTGAC.......................................................................................................................................................... 26 3 2 0.50 1 1 0 0 0 0 0 0
.........................................................................AAGCGCAAGCGTGACTCATTGACCATAGACT.................................................................................................................................................. 31 3 2 0.50 1 1 0 0 0 0 0 0
.........................................................................AAGCGCAAGCGTTACTCATTGAG.......................................................................................................................................................... 23 3 3 0.33 1 1 0 0 0 0 0 0
...........................................................................................................................................................TTTTCCGGTAGTCAAGACGT........................................................................... 20 2 3 0.33 1 0 0 0 0 0 1 0
........................................................................CAAGCGCAAGCGTGACTCATTGAC.......................................................................................................................................................... 24 3 3 0.33 1 0 1 0 0 0 0 0
...................................................................................................................................ATAACTAACAGAACGGGTAAACAT............................................................................................... 24 2 7 0.29 2 0 0 0 0 2 0 0
................................................................................................................................AAAATAACTAACAGAACGGGTAAACAT............................................................................................... 27 2 5 0.20 1 0 0 0 0 1 0 0
..................................................................................................................................AATAACTAACAGAACGGGTAAACAT............................................................................................... 25 2 6 0.17 1 0 0 0 0 1 0 0
.....................................................................................................................................AACTAACAGAACGGGTAAACAT............................................................................................... 22 2 7 0.14 1 0 0 0 0 1 0 0
....................................................................................................................................TAACTAACAGAACGGGTAAACAT............................................................................................... 23 2 7 0.14 1 0 0 0 0 1 0 0
......................................................................ATAAAGCGCAAGCGTA.................................................................................................................................................................... 16 0 8 0.13 1 0 0 0 0 0 0 1
................................................................................................CATAGAGTATGAGCCC.......................................................................................................................................... 16 1 11 0.09 1 1 0 0 0 0 0 0
...........TGAAAAAAAAGGAGTAAAAT........................................................................................................................................................................................................................... 20 2 15 0.07 1 0 0 0 0 0 0 1
..............................................................................................................................................................................AGTTGATTTCGAAGA............................................................. 15 1 15 0.07 1 1 0 0 0 0 0 0
........................................................................................................................................................................AAGAGGTGTTGACTTCG................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 1
.............AAAAAAAAAGAGTAAAA............................................................................................................................................................................................................................ 17 0 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:683545-683794 + dsi_30498 CACTTTTGA--ACAA-TTTTTTTTTCTCATTTTATTCCC----CTGTATCTG---------------TTG-------------ATATTCCAGAAAAATGATAAAAT-ATT---TCGCGTT-CGC---------------------------------------------------------------------------------------------------------------------------------------ATTGAGTAACGGGTATCTCATAGTCGGGT-ACTCT-----------------------------------------------------CTTGTTT--------------------------------------------CAATTTTATTGTTTTTCTTGCCCATTTGTACATAGGCCATCAGTTCTGCACAACTAAAGCTTCTCTTAATTTTAG----GTT------CACTGGAGCACACAAATAAACGGATTGTTCGTGATGTAATTGTAA-AC
droSec2 scaffold_377:573-823 + CACTTTTGA--ACAA-T-TTTTTTTCTCATTTTATTCCC----CTGTATCTG---------------TTG-------------ATATTCCAGAAAAATTATAAAAAAATT---TCGCGTT-CGC---------------------------------------------------------------------------------------------------------------------------------------ATTGAGTAACGGGTATCTCATAGTCTGGGTACTCT-----------------------------------------------------CTTGTTT--------------------------------------------CAATTTTATTGTTTTTCTTGCCCATTTGTACATAGGCCATCAGTTCTGCACAACTAAAGCTTCTCTTAATTTTAG----GTT------CACTGGAGCACACAAATAAACGGATCGTTCGTGATGTAATTGTAA-AC
dm3 chr2R:450213-450405 + AAATCGTAT--G-------------------------------------------------------------------------------------------------------GCGTTACGCATCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGTCTGGGAACTCT-----------------------------------------------------CTTGTTT--------------------------------------------TTATTTTATTGTTTTTCTTGTCCATTTGTACATAGTCAATTAGTTCTGCACAACTAAAGCTTCTCTTTATTTTAG----GTTCCCTATCCCTGGAGCACACAAATAAACGAATTGCTCGTGATGTAATTGTAA-AC
droEre2 scaffold_4929:23029273-23029513 - CACTTTTAA--AAAT-GTTTTTTTTCTCATTTTATTT-T----TTATTAGTC---------------TTGCCAGTTTGTATCGATATTCCAATAATATT---------TTGGA-CGCACC-CAC---------------------------------------------------------------------------------------------------------------------------------------AA--------------------------------------------------------------------------------------------------------------TTTTTAATAATGTTTTAATTTTTATTTGTAT---------TTGATTGCGCATTTGCAAATAGTCCTTCAATACTGCGCAACTAAAGCTTCTTTTAATATTAG----GATCTGTATCAATGGATCACACAATTAAAGTAATTGCCCGTGATGTAATTGTTA-GC
droYak3 2L:22035625-22035888 + CACATTTAA--AAAATGTTTTTTTTTTTATTTTAAT------------------------GTAAGTCCCGCCGTATTGTATTGATATGCCAAAAAAAAA---------TTGGCCCACGTC-CAC-----------------------------------AAAACTGTCACA-------------------------------------------------------------------------------------------------------CCCCTTAA-----------------------------------------------------------------------------------------TTTCTAAACATGTTCTTATATTTTT--TTATTTTATTATTTATTTTGCCCATTTGCACTTAGCTCTTCAGTACTGTCCAATTAAATCTTCTATTAATTTTAG----GATCTCTATCAACGGATTACACAATTAAACGAATTGCTCGTGATGTAATTGTAA-AC
droEug1 scf7180000408157:15071-15319 + TACTATTAG--TTGT-------------------------------------------------------------------------------------------------------------------TCAACAAGC-------------------------------TTTCTCTGACATGCTTTGTGAATTCTAGTGGAAATTCAAATATTTATATTTAAATGAATATTTTAC--------------AATTGTGTAAAACAGTAACGGGTATCTTATAGTCACGGCACTCGACTATAGAGTTTCTTC-TTGTTTTATTAGTATCTGTGACTAAATTTTAGCTAATGTTTTT--------------------------------------------TGGTTTTTTTAATGGTGC----------------------------------------------------------------------CACAGGTTGGTCCAAAAAGGGTTATTTTTTATGA-------TTAT-AC
droBia1 scf7180000301576:57908-58161 - CAAACTGTTAAACGC-T-TATTTTTGTCTGCCGGCCACATAGCATCTACCTGAATATCCGGTAGGTGGCGCCTTATAATATCGCTTTGCTGCTT-----------------------------------------------------ATATATCTTCATTTCCCTTTTGCTCCCTT---------------------------------------------------------------------------------AAGCTGAGTAACGGGTATCTGATAGTCGAGGCACTCGACTTTAGCGTTCTTTC-TTGTTTT-----------------------------------------------------------------------------------------------TTTTTAGCAT-TGTGCAATGGCTCTCAGGTGTT-ACTAGTAAAACT-------ATCTTAG----GGG------CCATTGCTCACGC----------------------------GAAA-AA
droTak1 scf7180000412943:15043-15271 - CCATTCGTTAAA-AA-GTTATGC----------------------------------------------------------------------------------------------------------GTGATCAACGTTTTCTATCTCTATCTCCATCTCCCTCGCACTCCCTT---------------------------------------------------------------------------------TACCTGAGTAACGGGTATCTGATAGTCGGGGAATCCGACTATAACGTTCCCTC-TTGTTTT--------------------------------------------------------------------------------------------TTCTCTTGTTTATTTAAACACATGTCACTATGTTCGTACATAAACAACTTT---TAGTTACAC----ACTTT----ATCTGAAAT-AATAACTAAATTTATTGT----------ATAATTA-AC
droEle1 scf7180000491104:1027139-1027260 + AACAATTTT--T---------------------------------------------------------T-------------AAA---------------------------------------TCGAGC---------------------------------------CACCTTA-GCTT-----------------------------------------------GTTTTGTAGGAGAAATATTTAGGTTGGGTGACTGAGTAACGGGTATCTAATAGTCGGGGAACTTGACTATAGCGTTCCTTTTTTGTTTT--------------------------------------------------------------------------------------------TT--------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000777339:29184-29426 + CATTCGTTA--AAAA-GTTATGC----------------------------------------------------------------------------------------------------------GTGATCAAAGTTT-------CTATCTCCATCTCCCTCGCACTCCCTT---------------------------------------------------------------------------------TAGCTGAGTAACGGGTATCTGATAGTCGGGGCACCCGACTATAGCGTTCTCTC-TTGT-------------------------------------TTAAAAATAATTTCTTTGAA-----------------------------------------TTCTGCGTATTTGTTAATATC-TATTAATTT------ACTATTACTTTTCCTTGTTTTAGTTAAGTT------ATCTGGAGAGATAATTTTAACGAATGCTTTTTGTTTCAAATGGAA-A-
droFic1 scf7180000452597:28984-29054 - TTTTTTTAT--T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAG----ACTCTGTTTCATTGGACCGTAAAATACAACTGTGTTCCCGTGATTTATCAATGA-AA
droKik1 scf7180000302682:1553005-1553141 + TTTAAA------TAA-C-TTTTTCTTTGGCTTAGCTTTCTAAGCTGTATTTGAGTCTTTG----------------------------------------------------------------------------------------------TTT---------------------------------------------------------------------AATGTTTTGTAATA--------------GAG-CCTTGAGTGCCGGGTATCTCATATTCGGGGCACTCGACAATGGCGTTCTTTCTTTGTTTT--------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------------------------------------------TT-TC
droAna3 scaffold_13337:10670994-10671068 - CTTTTTTCT--GCTA-TTTTTTTCTTCTATTTTTTCTTC----TCATAATTT---------------TTT-------------GAATTAAGAGAAAAAAATAAACT-AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT
droBip1 scf7180000395446:1996-2098 + AAAAAAGATAAA--------------------------------------------------------------------------------------------AG-TAT---CAAATTT-G---------------------------------------------------------------------------------------------------------------------------------------GAACCGAGTACCGGGTATAACATAGTCGGGAAACTCGACCATAGCCATCGTTTCTTGTTTT-------------------------------------------------------------------------------------TTGTTGCTTTTTTGG------------------------------------------------------------------------------------------------------------------CC
dp5 Unknown_group_432:5652-5684 - CAATTTTGA--ACCA-ATTTTACTTCTAATTTTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_4879:1372-1421 - ACTTTTTAA--TGGT-T-TTTTTTTTTTTTTTTTTTTTT----TTATATATT---------------TTG-------------G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA
droWil2 scf2_1100000004516:2408356-2408490 - TTTCGGAAA--T------------------------------------------------------------------------------------GTGATAAGAT-------GATAGTT-A------------------------------TGTCC---------------------------------------------------------------------AAT------------------------------TCTCACTAGTAAATATCTGAAGGATGATT----AA-----------------------------------------------------CGTGTTT--------------------------------------------CAATTCTCTTGTTTATTTTGCCAGTTTATTTGTTAATTATGCATTT-----------------------------------------------TTACACGC----------------------------TCAAGCT
droVir3 scaffold_13246:1751853-1751942 + TTAATCG-------C-TTTTGTCTTTTTGATTCAATTCT----TTTTATCTG---------------TTA-------------TTTTTTCAGGGAATATTTAACAT-ACT---TAATACA-CAA---------------------------------------------------------------------------------------------------------------------------------------ATTCAGCAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG
droMoj3 scaffold_6540:1381312-1381439 + CACCTTTAA--AGCT-A----------------------------------------------------------------------------------------------------------------GTCATCAAATTTT-------TAATGTAGATTTTCA------------------------TGTAATTT-ATGGAATTTCAATTTTTGTCAG-AA---------TTT------GAAATATT--GGTTGCT-CGAAGGGTTCAGGGGATCTCATAGTCGGGCAGTCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14422:1034-1169 + ATTTATAGT--CGAA-A-ATATATTCTTATATTTAAACT----TTCTAGAGG---------------GAA-------------ATTTTCCAATAAAACTAGAATAT-ATT---TAGC---------------------------------------------------------------------------------------------------------------------------------------------AACTGGTTTCAGGGTATATCGTAGTCGAGCACTCTT-ACTTGTTGTACTTTTTACGT-----------------------------------------------------------------------------------------------TTT-------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CACTTTTGA--ACAA-TTTTTTTTTCTCATTTTATTCCC----CTGTATCTG---------------TTG-------------ATATTCCAGAAAAATGATAAAAT-ATT---TCGCGTT-CGC---------------------------------------------------------------------------------------------------------------------------------------ATTGAGTAACGGGTATCTCATAGTCGGGT-ACTCT-----------------------------------------------------CTTGTTT--------------------------------------------CAATTTTATTGTTTTTCTTGCCCATTTGTACATAGGCCATCAGTTCTGCACAACTAAAGCTTCTCTTAATTTTAG----GTT------CACTGGAGCACACAAATAAACGGATTGTTCGTGATGTAATTGTAA-ACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAAATAAACGGATTG.....................1822.00422000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAAATAAACGGATTGTTC..................2121.00202000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAAATAAACGGATTGTTCGT................2321.00202000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------CACTGGAGCACACAAATAAACGGAT.......................2621.00200000000000002000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAATAAACGGATTGTTC..................2021.00201100000000000000
..................................TTCCC----CTGTATCTG---------------TTG-------------ATATTCCAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000000100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGAGCACACAAATAAACGGATTGTT...................2820.50100000010000000000
......................................................................................................................TT-CGC---------------------------------------------------------------------------------------------------------------------------------------ATTGAGTAACGGGTATCTCA...............................................................................................................................................................................................................................................................2520.50100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACAAATAAACGGATT......................1820.50100100000000000000
.............................................GTATCTG---------------TTG-------------ATATTCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50100000100000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAACGGATTGTTCGT................1820.50101000000000000000
.....................................................................................................................................................................................................................................................................TGAGTAACGGGTATCTCATAGTCGG........................................................................................................................................................................................................................................................2560.33200000000001010000
......................................................................................................................................................................................................................................................................GAGTAACGGGTATCTCATAGTCG.........................................................................................................................................................................................................................................................2360.17100010000000000000
........................................................................................................................................................................................................................................................................GTAACGGGTATCTCATAGT...........................................................................................................................................................................................................................................................1970.14100010000000000000
.....................................................................................................................................................................................................................................................................TGAGTAACGGGTATCTCATAGTCGGT.......................................................................................................................................................................................................................................................26120.08100000000100000000
.....................................................................................................................................................................................................................................................................TGAGTAACGGGTATCTCATAGTCGGGC-.....................................................................................................................................................................................................................................................27130.08100000000000010000
.........................................................................................CAGAAAAATGATAAAAT-...........................................................................................................................................................................................................................................................................................................................................................................................................................................17180.06100000000001000000
.....................................................................................................................................................................................................................................................................TGAGTAACGGGTATCTCATAGTCGCT.......................................................................................................................................................................................................................................................26200.05100000010000000000
droSec2
CACTTTTGA--ACAA-T-TTTTTTTCTCATTTTATTCCC----CTGTATCTG---------------TTG-------------ATATTCCAGAAAAATTATAAAAAAATT---TCGCGTT-CGC---------------------------------------------------------------------------------------------------------------------------------------ATTGAGTAACGGGTATCTCATAGTCTGGGTACTCT-----------------------------------------------------CTTGTTT--------------------------------------------CAATTTTATTGTTTTTCTTGCCCATTTGTACATAGGCCATCAGTTCTGCACAACTAAAGCTTCTCTTAATTTTAG----GTT------CACTGGAGCACACAAATAAACGGATCGTTCGTGATGTAATTGTAA-ACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAACGGATCGTTCGTGAT.............2111.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGGATCGTTCGTGATGTA..........2111.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAAATAAACGGATCGTTCGT................2311.0010100
........................................................................................................AAAATT---TCGCGTT-CGC---------------------------------------------------------------------------------------------------------------------------------------ATT................................................................................................................................................................................................................................................................................19170.0611000
dm3
AAATCGTAT--G-------------------------------------------------------------------------------------------------------GCGTTACGCATCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGTCTGGGAACTCT-----------------------------------------------------CTTGTTT--------------------------------------------TTATTTTATTGTTTTTCTTGTCCATTTGTACATAGTCAATTAGTTCTGCACAACTAAAGCTTCTCTTTATTTTAG----GTTCCCTATCCCTGGAGCACACAAATAAACGAATTGCTCGTGATGTAATTGTAA-ACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGAATTGCTCGTGATGTAATT.......2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTATCCCTGGAGCACACAAATAAAC...........................2816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAATAAACGAATTGCTCGTGATG............2614.0040000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGTCTGG.......................................................................................................................................................................................................................................................2523.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000101000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCTGGAGCACACAAATAAACGAAT.......................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CATCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CATCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGG............................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................CATCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGT...........................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TGGGAACTCT-----------------------------------------------------CTTGTTT--------------------------------------------T.......................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CATCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGTC..........................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGAATTGCTCGTGATGTAATTGT.....2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TTACGCATCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTC..................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................TCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGT...........................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGGAGCACACAAATAAACGAAT.......................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................................................................................................................................................................................................................................................................................TGTCT-TTGGTCTGGGAACTCT-----------------------------------------------------CTTG.......................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCTCGTGATGTAAT........1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCTCGTGATGTAATTGT.....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TAGTGTCT-TTGGTCTGGGAACTCT-----------------------------------------------------C..........................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GTGTCT-TTGGTCTGGGAAC...................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCACACAAATAAACGAATTGC....................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGAATTGCTCGTGATGTAAT........2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCCTGGAGCACACAA.................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................T-TTGGTCTGGGAACTCT-----------------------------------------------------CTTGTT.....................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTATCCCTGGAGCACACAAAT...............................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTGGAGCACACAAATAAACGAAT.......................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGCACACAAATAAACGAATTGCT...................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................TCT-----------------------------------------------------CTTGTTT--------------------------------------------TTATTTTATTGTTTTTCT......................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................ATCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGTC..........................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TAGTGTCT-TTGGTCTGGGAACT..................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TACATAGTCAATTAGTTCTGCACA....................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................ATCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG----GTTCCCTATCCCTGGAGCAC.....................................2211.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................ACGCATCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTG....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......TAT--G-------------------------------------------------------------------------------------------------------GCGTTACGCATCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------C.........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........G-------------------------------------------------------------------------------------------------------GCGTTACGCATCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTA.......................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TGGGAACTCT-----------------------------------------------------CTTGTTT--------------------------------------------TTATTTTA................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................ATCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-T...............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTATCCCTGGAGCACACAAATAAA............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGAATTGCTCGTGATGTAATTG......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCTTCTCTTTATTTTA..............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCCCTGGAGCACACAA.................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTCGTGATGTAATT.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAATTGCTCGTGATGTAATT.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TGGGAACTCT-----------------------------------------------------CTTGTTT--------------------------------------------TTATTTTATT..............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATAAACGAATTGCTCGTGATG............2411.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................ATCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGG............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTATTGTTTTTCTTG....................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TACGCATCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTG....................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTCGTGATGTAATTGT.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCGTGATGTAATTGTA....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TACGCATCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTC..................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TTACGCATCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGT...................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................TCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTG.............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCTATCCCTGGAGCACACAAA................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAG----GTTCCCTATCCCTGGAGCACA....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTCGTGATGTAATTGTAA-AC2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGAGCACACAAATAAACGA.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCTATCCCTGGAGCACACAAATA..............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGAATTGCTCGTGATGTAATTGTA....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................T-TTGGTCTGGGAACTCT-----------------------------------------------------CTTGTTT--------------------------------------------T.......................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGTCCATTTGTACATAGTCAATTAGT............................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTATCCCTGGAGCACACAAATAAACGAA........................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................T---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGTCTGGGAAC...................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCTGGAGCACACAAATA..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCCCTGGAGCACACAAATA..............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................AGTGTCT-TTGGTCTGGGAACT..................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGAATTGCTCGTGATGTAATTGT.....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTATTTTAG----GTTCCCTATCCCTGGA.........................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................T---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGTCTGG.......................................................................................................................................................................................................................................................2330.6720000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................TGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGT...........................................................................................................................................................................................................................................................21200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000020000000000000000000000000000000000000000100100000000000000000000010000000
......TAT--G-------------------------------------------------------------------------------------------------------GCGTTACGCATCGTGT---------------------------------------T...........................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................TGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGTCT.........................................................................................................................................................................................................................................................23200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000010000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATCGTAT--G-------------------------------------------------------------------------------------------------------GCGTTACGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................18200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGTCTG........................................................................................................................................................................................................................................................2470.2920000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGTC..........................................................................................................................................................................................................................................................22200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000002000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................T---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGTC..........................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGTCT.........................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................T---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGTCTG........................................................................................................................................................................................................................................................22120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................CTAGTGTCT-TTGGTCTGGGGG....................................................................................................................................................................................................................................................21180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................T---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGTCT.........................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGG............................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
................................................................................................................................TGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-T...............................................................................................................................................................................................................................................................17200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................GT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTG.............................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TCGTAT--G-------------------------------------------------------------------------------------------------------GCGTTACGCATC.......................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CATCGTGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGT............................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAATCGTAT--G-------------------------------------------------------------------------------------------------------GCGTTACGCAT........................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................T---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGT...........................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.................................................................................................................................GT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTGGTC..........................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................TGT---------------------------------------TATT----------------------------------------------------------------------------------------------CTAGTGTCT-TTG.............................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
droEre2
CACTTTTAA--AAAT-GTTTTTTTTCTCATTTTATTT-T----TTATTAGTC---------------TTGCCAGTTTGTATCGATATTCCAATAATATT---------TTGGA-CGCACC-CAC---------------------------------------------------------------------------------------------------------------------------------------AA--------------------------------------------------------------------------------------------------------------TTTTTAATAATGTTTTAATTTTTATTTGTAT---------TTGATTGCGCATTTGCAAATAGTCCTTCAATACTGCGCAACTAAAGCTTCTTTTAATATTAG----GATCTGTATCAATGGATCACACAATTAAAGTAATTGCCCGTGATGTAATTGTTA-GCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAATAGTCCTTCAATACTGCGCAA...................................................................................2711.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGATGTAATTGTTA-GC1830.3310000010
droYak3
CACATTTAA--AAAATGTTTTTTTTTTTATTTTAAT------------------------GTAAGTCCCGCCGTATTGTATTGATATGCCAAAAAAAAA---------TTGGCCCACGTC-CAC-----------------------------------AAAACTGTCACA-------------------------------------------------------------------------------------------------------CCCCTTAA-----------------------------------------------------------------------------------------TTTCTAAACATGTTCTTATATTTTT--TTATTTTATTATTTATTTTGCCCATTTGCACTTAGCTCTTCAGTACTGTCCAATTAAATCTTCTATTAATTTTAG----GATCTCTATCAACGGATTACACAATTAAACGAATTGCTCGTGATGTAATTGTAA-ACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGATTACACAATTAAAC...........................2011.00110000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAATTGCTCGTGATGTAAT........2211.00110000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAATTGCTCGTGATGTAATT.......2111.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACACAATTAAACGAATTGCTCGTGAT.............2811.00110000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATTAAACGAATTGCTCGT................2111.00100000010000
droEug1
TACTATTAG--TTGT-------------------------------------------------------------------------------------------------------------------TCAACAAGC-------------------------------TTTCTCTGACATGCTTTGTGAATTCTAGTGGAAATTCAAATATTTATATTTAAATGAATATTTTAC--------------AATTGTGTAAAACAGTAACGGGTATCTTATAGTCACGGCACTCGACTATAGAGTTTCTTC-TTGTTTTATTAGTATCTGTGACTAAATTTTAGCTAATGTTTTT--------------------------------------------TGGTTTTTTTAATGGTGC----------------------------------------------------------------------CACAGGTTGGTCCAAAAAGGGTTATTTTTTATGA-------TTAT-ACSizeHit CountTotal NormTotal
No Reads
droBia1
CAAACTGTTAAACGC-T-TATTTTTGTCTGCCGGCCACATAGCATCTACCTGAATATCCGGTAGGTGGCGCCTTATAATATCGCTTTGCTGCTT-----------------------------------------------------ATATATCTTCATTTCCCTTTTGCTCCCTT---------------------------------------------------------------------------------AAGCTGAGTAACGGGTATCTGATAGTCGAGGCACTCGACTTTAGCGTTCTTTC-TTGTTTT-----------------------------------------------------------------------------------------------TTTTTAGCAT-TGTGCAATGGCTCTCAGGTGTT-ACTAGTAAAACT-------ATCTTAG----GGG------CCATTGCTCACGC----------------------------GAAA-AASizeHit CountTotal NormTotal
No Reads
droTak1
CCATTCGTTAAA-AA-GTTATGC----------------------------------------------------------------------------------------------------------GTGATCAACGTTTTCTATCTCTATCTCCATCTCCCTCGCACTCCCTT---------------------------------------------------------------------------------TACCTGAGTAACGGGTATCTGATAGTCGGGGAATCCGACTATAACGTTCCCTC-TTGTTTT--------------------------------------------------------------------------------------------TTCTCTTGTTTATTTAAACACATGTCACTATGTTCGTACATAAACAACTTT---TAGTTACAC----ACTTT----ATCTGAAAT-AATAACTAAATTTATTGT----------ATAATTA-ACSizeHit CountTotal NormTotal
No Reads
droEle1
AACAATTTT--T---------------------------------------------------------T-------------AAA---------------------------------------TCGAGC---------------------------------------CACCTTA-GCTT-----------------------------------------------GTTTTGTAGGAGAAATATTTAGGTTGGGTGACTGAGTAACGGGTATCTAATAGTCGGGGAACTTGACTATAGCGTTCCTTTTTTGTTTT--------------------------------------------------------------------------------------------TT--------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CATTCGTTA--AAAA-GTTATGC----------------------------------------------------------------------------------------------------------GTGATCAAAGTTT-------CTATCTCCATCTCCCTCGCACTCCCTT---------------------------------------------------------------------------------TAGCTGAGTAACGGGTATCTGATAGTCGGGGCACCCGACTATAGCGTTCTCTC-TTGT-------------------------------------TTAAAAATAATTTCTTTGAA-----------------------------------------TTCTGCGTATTTGTTAATATC-TATTAATTT------ACTATTACTTTTCCTTGTTTTAGTTAAGTT------ATCTGGAGAGATAATTTTAACGAATGCTTTTTGTTTCAAATGGAA-A-SizeHit CountTotal NormTotal
No Reads
droFic1
TTTTTTTAT--T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAG----ACTCTGTTTCATTGGACCGTAAAATACAACTGTGTTCCCGTGATTTATCAATGA-AASizeHit CountTotal NormTotal
No Reads
droKik1
TTTAAA------TAA-C-TTTTTCTTTGGCTTAGCTTTCTAAGCTGTATTTGAGTCTTTG----------------------------------------------------------------------------------------------TTT---------------------------------------------------------------------AATGTTTTGTAATA--------------GAG-CCTTGAGTGCCGGGTATCTCATATTCGGGGCACTCGACAATGGCGTTCTTTCTTTGTTTT--------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------------------------------------------TT-TCSizeHit CountTotal NormTotal
No Reads
droAna3
CTTTTTTCT--GCTA-TTTTTTTCTTCTATTTTTTCTTC----TCATAATTT---------------TTT-------------GAATTAAGAGAAAAAAATAAACT-AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AAAAAAGATAAA--------------------------------------------------------------------------------------------AG-TAT---CAAATTT-G---------------------------------------------------------------------------------------------------------------------------------------GAACCGAGTACCGGGTATAACATAGTCGGGAAACTCGACCATAGCCATCGTTTCTTGTTTT-------------------------------------------------------------------------------------TTGTTGCTTTTTTGG------------------------------------------------------------------------------------------------------------------CCSizeHit CountTotal NormTotal
No Reads
dp5
CAATTTTGA--ACCA-ATTTTACTTCTAATTTTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
ACTTTTTAA--TGGT-T-TTTTTTTTTTTTTTTTTTTTT----TTATATATT---------------TTG-------------G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TTTCGGAAA--T------------------------------------------------------------------------------------GTGATAAGAT-------GATAGTT-A------------------------------TGTCC---------------------------------------------------------------------AAT------------------------------TCTCACTAGTAAATATCTGAAGGATGATT----AA-----------------------------------------------------CGTGTTT--------------------------------------------CAATTCTCTTGTTTATTTTGCCAGTTTATTTGTTAATTATGCATTT-----------------------------------------------TTACACGC----------------------------TCAAGCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TTAATCG-------C-TTTTGTCTTTTTGATTCAATTCT----TTTTATCTG---------------TTA-------------TTTTTTCAGGGAATATTTAACAT-ACT---TAATACA-CAA---------------------------------------------------------------------------------------------------------------------------------------ATTCAGCAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
CACCTTTAA--AGCT-A----------------------------------------------------------------------------------------------------------------GTCATCAAATTTT-------TAATGTAGATTTTCA------------------------TGTAATTT-ATGGAATTTCAATTTTTGTCAG-AA---------TTT------GAAATATT--GGTTGCT-CGAAGGGTTCAGGGGATCTCATAGTCGGGCAGTCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
CACCTTTAA--AGCT-A----------------------------------------------------------------------------------------------------------------GTCATCAAA............................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
droGri2
ATTTATAGT--CGAA-A-ATATATTCTTATATTTAAACT----TTCTAGAGG---------------GAA-------------ATTTTCCAATAAAACTAGAATAT-ATT---TAGC---------------------------------------------------------------------------------------------------------------------------------------------AACTGGTTTCAGGGTATATCGTAGTCGAGCACTCTT-ACTTGTTGTACTTTTTACGT-----------------------------------------------------------------------------------------------TTT-------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:04 PM