ID:

dsi_30497

 Coordinate:

3r:11292348-11292497 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.2 -18.8 -18.8

Flybase annnotation

CDS [3r_11292498_11292712_-]; exon [3r_11292498_11292712_-]; intron [3r_11280844_11292497_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGCCATATTTCAAGGACAAGGGCGATTCGAATAGCAGTGCTGGATGGAAGGTGAGTTATTCATTGATTCATTCAGTTTAAATGGGTTATTCATATTTCCCAGCTCGATACTTTCACTTTCTAAACTTACTTAGCTTAAGCTTAATCTCTATAAACAAAGCCCCAAAAATGCACTAAGTTTTCTTGTTGTTAATGTTTATTTCGACCTTTTTTTGCACCATGCTGCTCGCTGGTCTCGAAAAATAGCCATT
**************************************************((((((((.....))))))))..(((((((.((((..((....))..))))..................((((......)))).)))))))........(((((((.(((..(((.((.((.....)).)).)))..)))..))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M053
female body
 M023
head
 M025
embryo
 SRR902009
testis
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
.........TCAAGGACAAGGGCGATTCGAAT.......................................................................................................................................................................................................................... 23 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.................................GCAGTGCTGGATGGAAGG....................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
........TTCAAGGACAAGGGCGATTCGAATAGCA...................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................AAGGGCGATTCGAATAGC....................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................GTTATTCATTGATTCATTCA................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........TCAAGGACAAGGGCGATTCGG............................................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................CGAATAGCAGTGCTGGATGGAAG........................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...CATATTTCAAGGACAAGGGC................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........CAAGGACAAGGGCGATTC.............................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......ATTTCAAGGACAAGGGCGATTCGAAT.......................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......TTTCAAGGACAAGGGCGATTC.............................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
........TTCAAGGACAAGGGCGATTC.............................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................GATTCGAATAGCAGTGCTG................................................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........ATCAAGGACAAGGGCGATTT.............................................................................................................................................................................................................................. 20 2 3 0.67 2 0 0 0 0 2 0 0 0 0 0
.................................................................................................CCCAGCTCGATATTTTCTC...................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0
...................................AGTGATGGGTGGAAGGTGTGT.................................................................................................................................................................................................. 21 3 6 0.33 2 0 0 0 0 2 0 0 0 0 0
..................................................................................................................................................................................TTTCTTGTAGTTGATGGTTATT.................................................. 22 3 4 0.25 1 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................CTATATAAACAAAGC.......................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................................................................................................................TGACTGGTCTCGAAAAA........ 17 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

ACGGTATAAAGTTCCTGTTCCCGCTAAGCTTATCGTCACGACCTACCTTCCACTCAATAAGTAACTAAGTAAGTCAAATTTACCCAATAAGTATAAAGGGTCGAGCTATGAAAGTGAAAGATTTGAATGAATCGAATTCGAATTAGAGATATTTGTTTCGGGGTTTTTACGTGATTCAAAAGAACAACAATTACAAATAAAGCTGGAAAAAAACGTGGTACGACGAGCGACCAGAGCTTTTTATCGGTAA
**************************************************((((((((.....))))))))..(((((((.((((..((....))..))))..................((((......)))).)))))))........(((((((.(((..(((.((.((.....)).)).)))..)))..))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
............................................................................................................................................AAGTAGAGATTTTTGTTTCGGCGT...................................................................................... 24 3 1 1.00 1 1 0 0 0
..............GGGTTCCCGCTAAGCTT........................................................................................................................................................................................................................... 17 2 13 0.15 2 0 2 0 0
...............................................................................................................................................................................................................AAAAAACGTGGTATGAAG......................... 18 2 12 0.08 1 0 0 1 0
................................................................................................TGGGTCGAGTTATGAA.......................................................................................................................................... 16 2 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:11292298-11292547 - dsi_30497 TGCCATATTTCAAGGACAAGGGCGATTCGAATAGCAGTGCTGGATGGAAGGTGAGTTAT----TCATT----------------------------------------------------------------------------------------------------------------------GATTCATTCAG--TTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGGGTTATTC---------------------A-TATTTCCCAGCTCGAT--------ACTTTCACTTTCTAAACTTACTTAGCTTAAGCTTAATCTCTATAAACAAAG------------------------------------------------------------------CCCCAAAAATGCA--CTAAG--------TTTT----------CTTGTTGTTAATGTTT-ATT--------------------------TCGAC------CT-T----TT-TTTGCACCATGCTGCTCGCTGGTCTCGAAAAATAGCCA-----TT
droSec2 scaffold_0:12122799-12123048 - TGCCATATTTCAAGGACAAGGGCGATTCGAATAGCAGTGCTGGATGGAAGGTGAGTTAT----TCATT----------------------------------------------------------------------------------------------------------------------GATTCATTCAG--TTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGGGTTATTC---------------------A-TATTTCCCAGCTCGTT--------ACTTTAACTTTTTATAATTACTAAGCTTAAACTTAATCTTCATAATGAAAG------------------------------------------------------------------CCCCAAAAATGCA--CTATG--------TTTT----------CTTATTGTTAATGTTT-ATT--------------------------TCGAC------CT-T----TT-TTTGCACCATGCTTCTCGCTGGTCTCGAAAAATAGCCA-----TT
dm3 chr3R:9892825-9893101 + TGCCATATTTCAAGGACAAGGGCGATTCGAATAGCAGTGCCGGATGGAAGGTGAGTTAT----TCAT---------------------------------------------------------------------AAA------TAGGCTT----TTTGTTTTATATG-------AACCTTCGGGGATTCATGCAT--TTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGGGTTATTC---------------------A-TATTTCCCAGCTCGAT--------ACTTTCACTTTTTATACTTACTAAGCTTAAGTTTAATCTTCATA-------------------------------------------------------------------ATCAAAGCCACAAATTGCA--CTACG--------TTTT----------CTTGTTGTTAATGTTT-GTT--------------------------TCGAC------CT-T----T--TTTCCACCATGCT---CGCTGGTCTCGAAAAATAGCCA-----TT
droEre2 scaffold_4770:9433486-9433762 + TGCCATACTTCAAGGACAAGGGCGATTCGAATAGCAGTGCTGGATGGAAGGTGAGTTC--AGC---------------------------------------------------TCC-AGCTCAAACTTTCTCGCTAAG------T---------------------------------------------------------------------------------------------------------------------------------------ATATAATTAA----------------------------AAATTGTAGTAATAGTACCAAAGTG----------------------------------------------------------AAAGGAGTCCCATTT----------------------------------CAT--------AGTTTCACTTGTTGTATTTCCCA------------------------------------------------------------------AGCC--------TAATCCTCCTTTTCAAGCCCAAAACTCCA--CTACTTTCTTACTTTTT----------CCTGTTGTTAAGGTTT-ATT--------------------------TCGAC------CT-T----TTTTGTGCACAACGCT---CGCTGCTCTTGA--AATAGCCA-----AT
droYak3 3R:16539139-16539480 - TGCCATACTTCAAGGACAAGGGCGACTCGAATAGCAGTGCTGGATGGAAGGTGAGTGG------------------------------------------------------------AGTGCAAAGGTTCTCGATAAG------TAGGCTAGGAAATTG------ATG-------AAACTCTTGGGATTCTTT-AT------------------------------ATAT---TATC--AAT--------------------------------------------TCAA----------------------------AAATAGTAATCATATGACCAATATT----------------------------------------------------------AAACTGGTCCCACTTAATAGAACCATCTGGCTTTG-TATTTACCAGTTCGACATTAGTAGATTTTCACTTGTTATATTTACTA------------------------------------------------------------------AGCC--------TTATCAATCTTTTAAACCCCTAAACTGTG--CTAAT--------AATT----------CTT---------GATT-ATT--------------------------TCGAC------CT-T----TTCTGTCCACAATGCT---CGCTGGTCTTGA--AATAGCCAGTTCATT
droEug1 scf7180000409802:49339-49491 - TACTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTT----TACCAATTT------------------------------------------------------------------AGCT--------AAATCTTCTTT-----TCCCCAAACTCCACA-----------------ATGTTTTTTGCCCTTTGTTTATGTTTG----TATTTCTTTCTTTTTGAGAG--CTTTCAACTTTGCCTCTTTT--T--TTGCAACAATACT---GTTTTGCTTTCA--GCTAACAA-----TT
droBia1 scf7180000302402:2680926-2681044 + TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCT--------TAATCGCATTGTCCGATCCCCAAACTCCA--CAATC--------TTTT----------CGTGTTGTTTATGTTT-ATAT-----------TTTTGAGAA--CTCTCAACT------T------T--TTCCCACATTGCT---TGCTGGCTTTCA--AATAACAA-----TT
droTak1 scf7180000415380:783733-783877 + TTATT-----------------------------------------------------------CTTT----------------------------------------------------------------------------------------------------------------------GCACTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC------------------------------------------------------------------AGTT--------TAATCGTCTTCTCCATACCTCTAACTCCA--TAATG--------TTTT----------TGAGTTGTTTATGTTTA----TATTTTTT---TTTTTAGAG--CTTTCAACT------T-T----TT-TTCCCACAATGCTTGTTGTTGGCTTTCA--AGTAAAAA-----TT
droEle1 scf7180000491047:1267413-1267758 - TGCCATACTTTAAGGACAAGGGCGATTCGAATAGCAGTGCCGGCTGGAAGGTAAATCAG----TTA------------------------ATTTTATGTTAATATCTTACAAATTTT-AATACAAATTTCCTTGATAAAATTCAATAGGA----CA-------------------------------GTTCAAGTATATTTCA-------------------AAGGTGTCTTTAATTCGTTAGTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGGTTATTC-----------------TATTGAATTTTCCAAGAACGATATAAGCGTAAATTTACTCTTGTAACTTACTT------------------------------------------------------------------AGCT--------TAATCAGTG--TCTAAACCTTAAACTCCA--CTATGTTT-------TT----------AGTTTTGTTTATGTTT----------------TGTTGAGAG--CTTTCAACTTTGTCGG------T--TTCCTACAATGCT---TGTTGGCTTTCA--AATAACCA-----TT
droRho1 scf7180000771044:836-893 + TGCCATACTTCAAGGACAAGGGCGATTCGAATAGCAGTGCCGGTTGGAAGGTAAGTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453912:398701-398870 + AT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAAGCTTGTCCTCCGTGCACTTTCACATCTTTCACTCACTT------------------------------------------------------------------AGTA--------AAATCTTCTTCTCGAAACTCCAAACTCCA--CTGGG--------TTTT----------TGTGTTGTTTATGTTT-ATTT-----------TTTTGAGAG--CTTTTAGCTTCGTCTT-T----T--TACCCACAATGTT---TGTTGGCTTTCA--AATAACAA-----TT
droKik1 scf7180000302475:1245970-1246117 - CCTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAAC--------A------CTCTCTTTATCAACTT------------------------------------------------------------------ACTT--------CAGTAAATC----TTTTCCCCAAACTCTA--CAGTTTAC-------TT----------TGTCTTGTTTATATTG----------TCT---TT---------CTTTCAACTTTGTATCTTTTTTTTATTCCCACAACGCT---CTTTGGCTTTCA--AATGGCAA-----AT
droAna3 scaffold_13340:20582483-20582539 - TGCCATACTTTAAGGACAAGGGCGATTCGAACAGCAGTGCTGGATGGAAGGTAGGTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396413:1820375-1820678 + TGCCATACTTTAAGGACAAGGGCGATTCGAACAGCAGTGCTGGCTGGAAGGTAGGTTCCTAGC---------------------------------------------------TCCTAGGTTATAATTTCG-------------------------------------------------------------------------------------------------------------AGTTAAAATATTAAAAGTGAATAAAATATAGACTCTTAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------CCACAACCATTAAGCTTGAG-----------------AAGCCCCAACATTACAAAGTTTTTACTTTCGTTACTTGCTTCTCTGGTTACTTCACTTAATACCCCCGTACA-----TGCAA--CAG-----------TAT----------GGTGTGGTTTATAGTG----------------TTTTGAGAGTGTTTTCAACTTGATATT------T--TTCCCACAATGCT---CTTTGGCTTTGA--AATAGCCA-----TT
dp5 2:13501039-13501093 - TGCCATACTTTAAGGATAAAGGCGATTCGAATAGCAGTGCCGGATGGAAGGTAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_0:6948604-6948614 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--AATAACAA-----TT
droWil2 scf2_1100000004921:2049307-2049526 + TGCCATATTTTAAGGATAAAGGTGATTCGAATAGCAGTGCCGGCTGGAAGGTGAGTAAC--------------------------------------------------------------------------------------C---------------------------------------------------------------------------------------------------------------------------------------ATATAATTTAGTTTTCCAAATTGCTCTAAACTTGAAGAACCTTGAAGTAAAAGCACAAGAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--TTCT---------TTTC----------TATATAGTTGAC--C------CATTTCAAATGGTATAAGTC--CCTTGGTTTTTGTCTG------T--TCTCTAAAAAGAA---TATCAGATGTCAACAGGAGCAA-----TG
droVir3 scaffold_12822:519136-519453 - dvi_2309 TGTCCTACTTTAAGGATAAAGGCGACTCGAATAGCAGTGCTGGCTGGAAGGTAAGCCT--AAGTTCTTGTTCTTCGCTGTAAATCAGTCTCTTTTA-GCCAAT----------------------------------CAATTCCATCGGA--AGCAATTG------TTGTTAATTTCCTTTAAGGGAACATATTCTC--CTTAAATGGACATTTTCTCTTTAAGGGAAAAT---CTTCATTAGCAACAAAATTAAAAAAAAAAAAA-------CACTTGCA-------------------------------------------------ACTATGCTAGTGCGCTCACTTGATCTTTGTCTGTTCACAAGTTCACAATATTTGTGAGCTATTGCATAATGCTAACTGGTTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCG--ACTAG--------TT
droMoj3 scaffold_6540:33196588-33196643 - TTTCATACTTTAAGGACAAAGGCGACTCGAATAGCAGCGCTGGCTGGAAGGTGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15074:3256032-3256220 + TGGCATACTTTAAGGATAAGGGCGACTCGAATAGCAGCGCTGGCTGGAAGGTGAGTCC--ATT---------------------------------------------------CGC-AG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTTTG----------ACCTCCATT----------------------------------------TCAGCGATTACATAATGCAAACCGGTTTCTT---------------------C-TTTTTACCAACTTGTT----------------------------------------------------------------------------------------------------G--------CA----------------------------------------------AAAATACGCATCATTTAGCAACATTTG----TATTTTTGTTTTGTT------------GTT------TT-T----TT-GTTGCA---------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGCCATATTTCAAGGACAAGGGCGATTCGAATAGCAGTGCTGGATGGAAGGTGAGTTAT----TCATT----------------------------------------------------------------------------------------------------------------------GATTCATTCAG--TTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGGGTTATTC---------------------A-TATTTCCCAGCTCGAT--------ACTTTCACTTTCTAAACTTACTTAGCTTAAGCTTAATCTCTATAAACAAAG------------------------------------------------------------------CCCCAAAAATGCA--CTAAG--------TTTT----------CTTGTTGTTAATGTTT-ATT--------------------------TCGAC------CT-T----TT-TTTGCACCATGCTGCTCGCTGGTCTCGAAAAATAGCCA-----TTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........TCAAGGACAAGGGCGATTCGAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00220000000000000000
.................................GCAGTGCTGGATGGAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000000100000
........TTCAAGGACAAGGGCGATTCGAATAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
.................AAGGGCGATTCGAATAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
......................................................GTTAT----TCATT----------------------------------------------------------------------------------------------------------------------GATTCATTCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.........TCAAGGACAAGGGCGATTCGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...........................CGAATAGCAGTGCTGGATGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
...CATATTTCAAGGACAAGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
..........CAAGGACAAGGGCGATTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
......ATTTCAAGGACAAGGGCGATTCGAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
.......TTTCAAGGACAAGGGCGATTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
........TTCAAGGACAAGGGCGATTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.......................GATTCGAATAGCAGTGCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
droSec2
TGCCATATTTCAAGGACAAGGGCGATTCGAATAGCAGTGCTGGATGGAAGGTGAGTTAT----TCATT----------------------------------------------------------------------------------------------------------------------GATTCATTCAG--TTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGGGTTATTC---------------------A-TATTTCCCAGCTCGTT--------ACTTTAACTTTTTATAATTACTAAGCTTAAACTTAATCTTCATAATGAAAG------------------------------------------------------------------CCCCAAAAATGCA--CTATG--------TTTT----------CTTATTGTTAATGTTT-ATT--------------------------TCGAC------CT-T----TT-TTTGCACCATGCTTCTCGCTGGTCTCGAAAAATAGCCA-----TTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................ATAGCAGTGCTGGATGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
dm3
TGCCATATTTCAAGGACAAGGGCGATTCGAATAGCAGTGCCGGATGGAAGGTGAGTTAT----TCAT---------------------------------------------------------------------AAA------TAGGCTT----TTTGTTTTATATG-------AACCTTCGGGGATTCATGCAT--TTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGGGTTATTC---------------------A-TATTTCCCAGCTCGAT--------ACTTTCACTTTTTATACTTACTAAGCTTAAGTTTAATCTTCATA-------------------------------------------------------------------ATCAAAGCCACAAATTGCA--CTACG--------TTTT----------CTTGTTGTTAATGTTT-GTT--------------------------TCGAC------CT-T----T--TTTCCACCATGCT---CGCTGGTCTCGAAAAATAGCCA-----TTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................TCGAATAGCAGTGCCGGATGGAAGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTCGAATAGCAGTGCCGGATGGAAGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AGCAGTGCCGGATGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000001001000000000000
..........................TCGAATAGCAGTGCCGGATGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AGCAGTGCCGGATGGAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000
............................GAATAGCAGTGCCGGATGGAAGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AGCAGTGCCGGATGGAAGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.......................GATTCGAATAGCAGTGCCGGATGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000000000000000
...CATATTTCAAGGACAAGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TCGAATAGCAGTGCCGGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACG--------TTTT----------CTTGTTGTTAATGTTT-G...............................................................................................2411.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCAAGGACAAGGGCGATTCGAATAGCAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGCTCGAT--------ACTTTCACTT......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AAGGGCGATTCGAATAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TATTTCAAGGACAAGGGCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..........................TCGAATAGCAGTGCCGGATGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATTCGAATAGCAGTGCCGGATGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................CGAATAGCAGTGCCGGATGGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ACAAGGGCGATTCGAATAGCAGTGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTCAAGGACAAGGGCGATTCGAATAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AAGGACAAGGGCGATTCGAATAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AATAGCAGTGCCGGATGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ATATTTCAAGGACAAGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................TAGCAGTGCCGGATGGAAGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCCATATTTCAAGGACAAGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TATTTCAAGGACAAGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTTCAAGGACAAGGGCGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATTCGAATAGCAGTGCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCA--CTACG--------TTTT----------CTTGTTGT.........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TATTC---------------------A-TATTTCCCAGCTCGA.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------TCGAC------CT-T----T--TTTCCACCATGC.................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CAAGGGCGATTCGAATAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...........................CGAATAGCAGTGCCGGATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................AATAGCAGTGCCGGATGGAAGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TAGCAGTGCCGGATGGAAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AGCAGTGCCGGATGGAAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
....................GGCGATTCGAATAGCAGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........CAAGGACAAGGGCGATTCGAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AGTGCCGGATGGAAGGTGAGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
.........................TTCGAATAGCAGTGCCGGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GCAGTGCCGGATGGAAGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TGCCATACTTCAAGGACAAGGGCGATTCGAATAGCAGTGCTGGATGGAAGGTGAGTTC--AGC---------------------------------------------------TCC-AGCTCAAACTTTCTCGCTAAG------T---------------------------------------------------------------------------------------------------------------------------------------ATATAATTAA----------------------------AAATTGTAGTAATAGTACCAAAGTG----------------------------------------------------------AAAGGAGTCCCATTT----------------------------------CAT--------AGTTTCACTTGTTGTATTTCCCA------------------------------------------------------------------AGCC--------TAATCCTCCTTTTCAAGCCCAAAACTCCA--CTACTTTCTTACTTTTT----------CCTGTTGTTAAGGTTT-ATT--------------------------TCGAC------CT-T----TTTTGTGCACAACGCT---CGCTGCTCTTGA--AATAGCCA-----ATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................GCTCAAACTTTCTCGCTAAG------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.................AAGGGCGATTCGAATAGCAGTGCTGGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
........................................................................................................................CTCAAACTTTCTCGCTAAG------T---------------------------------------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
....ATACTTCAAGGACAAGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.......................GATTCGAATAGCAGTGCTGGATGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
............................GAATAGCAGTGCTGGATGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
............................GAATAGCAGTGCTGGATGGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
................................AGCAGTGCTGGATGGAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
droYak3
TGCCATACTTCAAGGACAAGGGCGACTCGAATAGCAGTGCTGGATGGAAGGTGAGTGG------------------------------------------------------------AGTGCAAAGGTTCTCGATAAG------TAGGCTAGGAAATTG------ATG-------AAACTCTTGGGATTCTTT-AT------------------------------ATAT---TATC--AAT--------------------------------------------TCAA----------------------------AAATAGTAATCATATGACCAATATT----------------------------------------------------------AAACTGGTCCCACTTAATAGAACCATCTGGCTTTG-TATTTACCAGTTCGACATTAGTAGATTTTCACTTGTTATATTTACTA------------------------------------------------------------------AGCC--------TTATCAATCTTTTAAACCCCTAAACTGTG--CTAAT--------AATT----------CTT---------GATT-ATT--------------------------TCGAC------CT-T----TTCTGTCCACAATGCT---CGCTGGTCTTGA--AATAGCCAGTTCATTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................CTCGAATAGCAGTGCTGGATGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200000020000
...........................CGAATAGCAGTGCTGGATGGAAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.............................AATAGCAGTGCTGGATGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
................CAAGGGCGACTCGAATAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
..............................ATAGCAGTGCTGGATGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
.......................GACTCGAATAGCAGTGCTGGATGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
...................GGGCGACTCGAATAGCAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.......................GACTCGAATAGCAGTGCTGGATGGAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACAATGCT---CGCTGGTCTTGA--AATAGCC........2911.00110000000000
....................GGCGACTCGAATAGCAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000010000
........TTCAAGGACAAGGGCGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.................................GCAGTGCTGGATGGAAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.............................AATAGCAGTGCTGGATGGAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.......................GACTCGAATAGCAGTGCTGGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
......................................................................................................................................................................................................................................................................................................................................................TT----------------------------------------------------------AAACTGGTCCCACTTAATAG........................................................................................................................................................................................................................................................................................................................2211.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTACCAGTTCGACATTAGTA.................................................................................................................................................................................................................................................................................2211.00110000000000
.................................................................................................................................TCTCGATAAG------TAGGCTAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..........CAAGGACAAGGGCGACTCGAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------TCGAC------CT-T----TTCTGTCCACAATGCT---CGC..........................2811.00101000000000
.........TCAAGGACAAGGGCGACTCGAATAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
droEug1
TACTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTT----TACCAATTT------------------------------------------------------------------AGCT--------AAATCTTCTTT-----TCCCCAAACTCCACA-----------------ATGTTTTTTGCCCTTTGTTTATGTTTG----TATTTCTTTCTTTTTGAGAG--CTTTCAACTTTGCCTCTTTT--T--TTGCAACAATACT---GTTTTGCTTTCA--GCTAACAA-----TTSizeHit CountTotal NormTotal
No Reads
droBia1
TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCT--------TAATCGCATTGTCCGATCCCCAAACTCCA--CAATC--------TTTT----------CGTGTTGTTTATGTTT-ATAT-----------TTTTGAGAA--CTCTCAACT------T------T--TTCCCACATTGCT---TGCTGGCTTTCA--AATAACAA-----TTSizeHit CountTotal NormTotal
No Reads
droTak1
TTATT-----------------------------------------------------------CTTT----------------------------------------------------------------------------------------------------------------------GCACTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC------------------------------------------------------------------AGTT--------TAATCGTCTTCTCCATACCTCTAACTCCA--TAATG--------TTTT----------TGAGTTGTTTATGTTTA----TATTTTTT---TTTTTAGAG--CTTTCAACT------T-T----TT-TTCCCACAATGCTTGTTGTTGGCTTTCA--AGTAAAAA-----TTSizeHit CountTotal NormTotal
No Reads
droEle1
TGCCATACTTTAAGGACAAGGGCGATTCGAATAGCAGTGCCGGCTGGAAGGTAAATCAG----TTA------------------------ATTTTATGTTAATATCTTACAAATTTT-AATACAAATTTCCTTGATAAAATTCAATAGGA----CA-------------------------------GTTCAAGTATATTTCA-------------------AAGGTGTCTTTAATTCGTTAGTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGGTTATTC-----------------TATTGAATTTTCCAAGAACGATATAAGCGTAAATTTACTCTTGTAACTTACTT------------------------------------------------------------------AGCT--------TAATCAGTG--TCTAAACCTTAAACTCCA--CTATGTTT-------TT----------AGTTTTGTTTATGTTT----------------TGTTGAGAG--CTTTCAACTTTGTCGG------T--TTCCTACAATGCT---TGTTGGCTTTCA--AATAACCA-----TTSizeHit CountTotal NormTotal
No Reads
droRho1
TGCCATACTTCAAGGACAAGGGCGATTCGAATAGCAGTGCCGGTTGGAAGGTAAGTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAAGCTTGTCCTCCGTGCACTTTCACATCTTTCACTCACTT------------------------------------------------------------------AGTA--------AAATCTTCTTCTCGAAACTCCAAACTCCA--CTGGG--------TTTT----------TGTGTTGTTTATGTTT-ATTT-----------TTTTGAGAG--CTTTTAGCTTCGTCTT-T----T--TACCCACAATGTT---TGTTGGCTTTCA--AATAACAA-----TTSizeHit CountTotal NormTotal
No Reads
droKik1
CCTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAAC--------A------CTCTCTTTATCAACTT------------------------------------------------------------------ACTT--------CAGTAAATC----TTTTCCCCAAACTCTA--CAGTTTAC-------TT----------TGTCTTGTTTATATTG----------TCT---TT---------CTTTCAACTTTGTATCTTTTTTTTATTCCCACAACGCT---CTTTGGCTTTCA--AATGGCAA-----ATSizeHit CountTotal NormTotal
No Reads
droAna3
TGCCATACTTTAAGGACAAGGGCGATTCGAACAGCAGTGCTGGATGGAAGGTAGGTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................GAACAGCAGTGCTGGATGGAAGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
..................AGGGCGATTCGAACAGCAGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.......................GATTCGAACAGCAGTGCTGGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
..............GACAAGGGCGATTCGAACAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...CATACTTTAAGGACAAGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.............................AACAGCAGTGCTGGATGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
................................AGCAGTGCTGGATGGAAGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.331000001
droBip1
TGCCATACTTTAAGGACAAGGGCGATTCGAACAGCAGTGCTGGCTGGAAGGTAGGTTCCTAGC---------------------------------------------------TCCTAGGTTATAATTTCG-------------------------------------------------------------------------------------------------------------AGTTAAAATATTAAAAGTGAATAAAATATAGACTCTTAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------CCACAACCATTAAGCTTGAG-----------------AAGCCCCAACATTACAAAGTTTTTACTTTCGTTACTTGCTTCTCTGGTTACTTCACTTAATACCCCCGTACA-----TGCAA--CAG-----------TAT----------GGTGTGGTTTATAGTG----------------TTTTGAGAGTGTTTTCAACTTGATATT------T--TTCCCACAATGCT---CTTTGGCTTTGA--AATAGCCA-----TTSizeHit CountTotal NormTotal
No Reads
dp5
TGCCATACTTTAAGGATAAAGGCGATTCGAATAGCAGTGCCGGATGGAAGGTAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................GATTCGAATAGCAGTGCCGGATGGAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000001000
........................ATTCGAATAGCAGTGCCGGATGGAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
...............................TAGCAGTGCCGGATGGAAGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
..............................ATAGCAGTGCCGGATGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
.................AAAGGCGATTCGAATAGCAGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
...........................CGAATAGCAGTGCCGGATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...........................CGAATAGCAGTGCCGGATGGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
........................ATTCGAATAGCAGTGCCGGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--AATAACAA-----TTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TGCCATATTTTAAGGATAAAGGTGATTCGAATAGCAGTGCCGGCTGGAAGGTGAGTAAC--------------------------------------------------------------------------------------C---------------------------------------------------------------------------------------------------------------------------------------ATATAATTTAGTTTTCCAAATTGCTCTAAACTTGAAGAACCTTGAAGTAAAAGCACAAGAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--TTCT---------TTTC----------TATATAGTTGAC--C------CATTTCAAATGGTATAAGTC--CCTTGGTTTTTGTCTG------T--TCTCTAAAAAGAA---TATCAGATGTCAACAGGAGCAA-----TGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................TAAAGGTGATTCGAATAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200
.................AAAGGTGATTCGAATAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200
.......................GATTCGAATAGCAGTGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
............................GAATAGCAGTGCCGGCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
...................AGGTGATTCGAATAGCAGTGCCGGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100001
.......................................................TAAC--------------------------------------------------------------------------------------C---------------------------------------------------------------------------------------------------------------------------------------ATATAATTTAGTTTTCCAAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.........TTAAGGATAAAGGTGATTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
........TTTAAGGATAAAGGTGATTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.........TTAAGGATAAAGGTGATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
................TAAAGGTGATTCGAATAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
................TAAAGGTGATTCGAATAGCAGTGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.................AAAGGTGATTCGAATAGCAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
................TAAAGGTGATTCGAATAGCAGTGCCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
droVir3
TGTCCTACTTTAAGGATAAAGGCGACTCGAATAGCAGTGCTGGCTGGAAGGTAAGCCT--AAGTTCTTGTTCTTCGCTGTAAATCAGTCTCTTTTA-GCCAAT----------------------------------CAATTCCATCGGA--AGCAATTG------TTGTTAATTTCCTTTAAGGGAACATATTCTC--CTTAAATGGACATTTTCTCTTTAAGGGAAAAT---CTTCATTAGCAACAAAATTAAAAAAAAAAAAA-------CACTTGCA-------------------------------------------------ACTATGCTAGTGCGCTCACTTGATCTTTGTCTGTTCACAAGTTCACAATATTTGTGAGCTATTGCATAATGCTAACTGGTTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCG--ACTAG--------TTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................TGGCTGGAAGGTAAGCCT--AAGTTCTTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
....CTACTTTAAGGATAAAGGCGACTCGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
.................................GCAGTGCTGGCTGGAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
...........AAGGATAAAGGCGACTCGAATAGCAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000010000
...........AAGGATAAAGGCGACTCGAATAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000001000000000000000000000000000000000000000000000000000
........TTTAAGGATAAAGGCGACTCGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000100000000000000000000000000
droMoj3
TTTCATACTTTAAGGACAAAGGCGACTCGAATAGCAGCGCTGGCTGGAAGGTGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................GCGACTCGAATAGCAGCGCTGGCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
droGri2
TGGCATACTTTAAGGATAAGGGCGACTCGAATAGCAGCGCTGGCTGGAAGGTGAGTCC--ATT---------------------------------------------------CGC-AG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTTTG----------ACCTCCATT----------------------------------------TCAGCGATTACATAATGCAAACCGGTTTCTT---------------------C-TTTTTACCAACTTGTT----------------------------------------------------------------------------------------------------G--------CA----------------------------------------------AAAATACGCATCATTTAGCAACATTTG----TATTTTTGTTTTGTT------------GTT------TT-T----TT-GTTGCA---------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........AAGGATAAGGGCGACTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
...........AAGGATAAGGGCGACTCGAATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
.................AAGGGCGACTCGAATAGCAGCGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101

Generated: 05/18/2015 at 09:30 AM