ID:

dsi_30491

 Coordinate:

2r:7903550-7903835 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.9 -19.8 -19.8

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CATTTTAGAGAGACTCATTCAGTCCTCCCAAACAGCCAAAGCCGGAGCACGTAAGCACCGGCGATCTAGCGCCAAAATTAGTTAATATTGGAAAGTGTGTGATCTGGGGGGATTAAATATCGTAGTTTATGTGATTTGTTCAATCGTTATTATCTCTGCATGCCGCGTGTCAAACTTGTGTTATAGATAATCAAAATCCATTTTCGAATCCGATTCGTTTGTTTTGCCACGTTGTTTGTTTCTGTGATTTTGTTTGCCCCCTCCAGTAGCATGCTGAAATGCAGAAAGTAGAACCATAAACCGAATACCATGATTTCCTATATACTATCCATTCAGACGCGAACCGCTAAAGGCCAAAGAGCCCACAGAACACAGCCCGTAAATTA
************************************************************************************************************************************************************************..(((((.((((..((((((((((....((.......))....)))).)))))).....))))..)))))(((((((.(((((((.(((...........))).)).)))))))))))).................********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M024
male body		 M025
embryo
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
.................................................................................................TGTGTTCTGGGGGGAGTA............................................................................................................................................................................................................................................................................... 18 2 4 2.25 9 9 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................AAGTAGAACCATAAACCGA.................................................................................. 19 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................GTCAAACTTGTGTTATAGATA..................................................................................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
...............................................................................................TTTGGGATCTGGGGGGAGTA............................................................................................................................................................................................................................................................................... 20 3 6 1.83 11 11 0 0 0 0 0 0 0 0 0
.................................................................................................TGGGTTCTGGGGGGATTA............................................................................................................................................................................................................................................................................... 18 2 5 1.40 7 7 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................CAAAGAGCCCACAGAACACAGCCCGC...... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................ACAGCCAAAGCCGGAGCACGTA............................................................................................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................CCCAAACAGCCAAAGCCGGAGCA................................................................................................................................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................CTATCCATTCAGACGCGAACCGCTAA.................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................GAAAGTAGAACCATAAACC.................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................AGTAGAACCATAAACCGAAT................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................................ACAGAACACAGCCCGTA..... 17 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................CTATCCATTCAGACGCGAACC......................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................GAAAGTAGAACCATGAACCGA.................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................GAGCACGTAAGCACCGGCGA.................................................................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................CCAAAGAGCCCACAGAACACAGCCC........ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................CATGCCGCGTGTCAAACTTGTGTT............................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................CAAACAGCCAAAGCCGGAGC.................................................................................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................................................TTGGGATCTGGGGGGAGTA............................................................................................................................................................................................................................................................................... 19 3 14 0.71 10 10 0 0 0 0 0 0 0 0 0
............................................................................................AAGTGTGTGATCTGGGGGTTTT................................................................................................................................................................................................................................................................................ 22 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0
................................................................................................TTGTGCTCTGGGGGGAGTA............................................................................................................................................................................................................................................................................... 19 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................GTAGCATCCTGCGATGCAGA..................................................................................................... 20 3 7 0.14 1 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................TTATAGATAATCTAAA.............................................................................................................................................................................................. 16 1 10 0.10 1 0 0 0 0 0 0 0 0 1 0
................................................................................................TTGGGATCTGGGGGGATTAT.............................................................................................................................................................................................................................................................................. 20 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................TTATTTCTGTGATTTTGCTTGC................................................................................................................................. 22 2 11 0.09 1 0 0 0 0 0 0 0 0 0 1
...................................................................................AATTTTGGAAAGTGTG............................................................................................................................................................................................................................................................................................... 16 1 16 0.06 1 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................TAGAACCTTAAACCGGA................................................................................. 17 2 17 0.06 1 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................TTTGTTCAAACGTTA............................................................................................................................................................................................................................................. 15 1 19 0.05 1 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

GTAAAATCTCTCTGAGTAAGTCAGGAGGGTTTGTCGGTTTCGGCCTCGTGCATTCGTGGCCGCTAGATCGCGGTTTTAATCAATTATAACCTTTCACACACTAGACCCCCCTAATTTATAGCATCAAATACACTAAACAAGTTAGCAATAATAGAGACGTACGGCGCACAGTTTGAACACAATATCTATTAGTTTTAGGTAAAAGCTTAGGCTAAGCAAACAAAACGGTGCAACAAACAAAGACACTAAAACAAACGGGGGAGGTCATCGTACGACTTTACGTCTTTCATCTTGGTATTTGGCTTATGGTACTAAAGGATATATGATAGGTAAGTCTGCGCTTGGCGATTTCCGGTTTCTCGGGTGTCTTGTGTCGGGCATTTAAT
**********************************************************************************..(((((.((((..((((((((((....((.......))....)))).)))))).....))))..)))))(((((((.(((((((.(((...........))).)).)))))))))))).................************************************************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 O001
Testis
 M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 M025
embryo
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
......................................................................................................................................................................................................................................................................................................GTATTTGGCTTATGGTACTAA....................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................TGGTACCACAGGATCTATGA............................................................ 20 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................GGCTGCGAGATCGCGGT........................................................................................................................................................................................................................................................................................................................ 17 2 5 0.40 2 0 0 1 0 0 0 0 1 0 0 0 0
........................................................TGGCCGCTAGGTCGCG.......................................................................................................................................................................................................................................................................................................................... 16 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................AGGTAATCCTGCGCTTGG......................................... 18 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................TGGTACCATAGGATCTATGA............................................................ 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................CTTATGGTACTAAGGGCT.................................................................. 18 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................AAGTTAGGAATAACAGAGACC................................................................................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................AGTTAGGAATAATACAGA..................................................................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................CGTATTTGGGTTATGGTA........................................................................... 18 2 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................TGAGCAATAATAGGGACGTT................................................................................................................................................................................................................................. 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................AGTTAGGAATAATGCAGAC.................................................................................................................................................................................................................................... 19 3 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0
..........................GGGTTTGTCGGGTTCGG....................................................................................................................................................................................................................................................................................................................................................... 17 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................TTGGGTTATGGTACTA........................................................................ 16 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................GGTTTGTCGGGTTCGG....................................................................................................................................................................................................................................................................................................................................................... 16 1 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................GGGTTTGTCGGGTTCG........................................................................................................................................................................................................................................................................................................................................................ 16 1 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AGCTTAGGCTGAGAAAA...................................................................................................................................................................... 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................GGTTTCTCGGGTCTCCCGT.............. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................................................................................................................................................................................................AAAGACACTAGCACAAA................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................................................................................................................................................CTTGGAGATTGCCGGT.............................. 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:7903500-7903885 - dsi_30491 CATTTTAGAGAG-------ACTC-A-TTCAGTCCTCCCAAACAGCCA-AAGCCGGAGCACGTAAGC--ACCG--GCGATCTAGCG--CCAAA-ATTAGT-----T--AATA--TTGG----------AAA------GTGTG-------TGA--TC-TGGGGGGA--------T--TA-----AATA--------------TC--------GTAG-----------TTT---------ATGTGATTTGTT--------------------------------------------------------------------------------------------------CAATC----GTTATTATCTCTGCATGCCGCGTGTCAAACTTGTGTTATAGATAATCAAA----ATC-------------------------------CAT-TTTCGAATCCGATTCGTTT--GTTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CCC---CTCCA-----GTAGCATGCTGAA---------AT-G-CAGAAAGTAGA-------ACCATAAACC------GAATACCATGATT-----------T-----CCTA----T--A--TACTATCC-ATTCAGACGCG---AACCGCTAAAGGCC----------------------------AAAGAGCCCACAG-AA--CA-CAGC-CCGTA--AATTA
droSec2 scaffold_1:4751629-4752011 - AATTTTAGAGAG-------ACTC-A-TTCAGTCCTCCCAAACAGCCA-AAGCCGGAGCACGTAAGC--ACCG--GCGATCTAGCG--CCAAA-ATTAGT-----T--AATA--TTGG----------AAA------GTGTG-------TGA--TC-TGGGGGA---------T--TA-----AATA--------------TC--------GTAG-----------TTT---------ATGTGATTTGTA--------------------------------------------------------------------------------------------------CAATC----GTTATTATCTCTGCATGCCGCGTGTCAAACTTGTGTTATAGATAATCAAA----ATC-------------------------------CAT-TTTCGAATCCGATTCGTTT--GTTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CCC----CCCA-----GTAGCATGCTGAA---------AT-G-CTGAAAGTAGA-------ACCATAAACC------GAATACCATGATT-----------T-----CCTA----T--A--TACTATCC-ATTCAGACGCG---AACCGCTAA-GGCC----------------------------AAAGAGCCCACAG-AA--CA-CAGC-CCGTA--AATTA
dm3 chr2R:7183341-7183726 - AGTTTTAGAGAG-------ACTC-A-TTCAGTCCTCCCAAACAGCAG-AAGCCGGAGCACGTAAGC--ACCG--GCGATCTAGCG--CCAAA-ATTAGT-----T--AATA--TTGG----------AAA------GTGTG-------CGA--TT-TGGGGGGGA-------T--TA-----AATA--------------TC--------GTAG-----------TTT---------ATGTGATTTGTA--------------------------------------------------------------------------------------------------CAATC----GTTATTATCTCTGCATGCCGCGTGTCAAACTTGTGTTATAGATAATCAAA----ATC-------------------------------CAT-TTTCGAATTCGATTCGTTT--GTTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CCC----CCCA-----ATAGCATGCTGAA---------AT-G-CAGAAAGTAGA-------ACCATAAACC------GAATACCATGATT-----------T-----CCTA----T--A--TACCATCC-ATTCAGACGCG---AACCGCTAAAAGCC----------------------------AAAGAGCCCACAG-AA--CC-CAGC-CCGTA--AATTA
droEre2 scaffold_4845:18605105-18605504 + ACTTTTAGAGAG-------ACTC-A-TTCAGTCCTGCCAAACCTCAG-AAGCCGCAGCACGTAAGC--ACCG--GCGATCTAGCG--CCAAA-AGTAGT-----T--AATA--TTGG----------AAA------GTGTG-------TGA--GC-TGGGGAAA--------------------TATCATATCATA----TC--------ATAG-----------TTT---------ATGTGATTTGTACAATA------------------------------------------------------------------------------GTT-------T----CATTC----GTTATTATCTCTGCATGCCGCGTGTCAAACTTGTGTTAAAGATAATCGAA----ATC-------------------------------CAT-TTTCGAGTACGATTAGTTT--ATTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CCC-----CCA-----GTAGCATGCTGAA---------AT-G-CAGAAACTAGA-------ACCATAAACCAACC--GAATACCATGATT-----------T-----CCTA----T--A--TACCATCC-ATTCAGACGCG---AACCGCTAAAGGCGAGA------------------------------GCCCACAG-AA--CA-CAGC-CCGTA--AATTA
droYak3 2R:1956668-1957066 + AATTTTAGAGAG-------ACTC-A-TTCAGTCCTCCCAAACCGCAG-AAGCCAAAGCACGTAAGC--ACCG--GCGATCTATTA-ACTAAA-ATTAGT-----T--AGCA--TTGG----------AAA------GTGTG-------TGA--TC-TGGGGGAA------------A-----AATA--------------TC--------ATAG-----------TTTAAGTGATTAATGTGATTTGTACAATA------------------------------------------------------------------------------GCT-------T----TAGTC----GGTTTTATCTCTGCATGCCGCGTGTCAAACTTGTGTTAAAGATAATGAAA----ATC-------------------------------CAT-TTTTGAATATGATTAGTTT--GTTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CCC-----CCA-----GTAGCATGCTGAA---------GT-G-CAGAAACTAGA-------ACCATAAACC------GAATACCATGATT-----------T-----CCTA----T--A--TACCATCC-ATTCAGACGCG---AACCGCTAAAGGCGAGA------------------------------GCCCACAG-AA--CA-CAGC-CCGTA--AATTA
droEug1 scf7180000409462:1315357-1315768 + CATTTTAGAGAGT------GTTC-A-TTCAGTCCCACCGAACAGCAG-AAGCCGGAGCACGTAAGC--ACCG--GCGATCTAGCG--CCAAA-ATTAAG-----A--GATA--TTTA----------AAA------GTCTG-------TGT--GC-TGGGGGGAATAA----T--TA-----A------------ATAA------------AAT-----------TTT---------TTTTGATTTGTAAAATATTTTAAATT-------------------------------------------------------------------------------A----AAATC----GTTATTTTCACTGCATGCCGCGTGTCAAGCTTGTGTTACAGATAATCTAA----GACCGT--AGT--------------ACTAAAATCTAT-TCTCGTATCAGATTAGTTTCTTTTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CC------CCA-----GTAGCATGCTAGA-------T-AT-C-CAGAGACT-------AGAACC-----------GT--AAACCATGATT-----------T-----CCTA----T--ATGTACCACCC-ATTCAGACGCG---AACCGCTAAAGGCGAGA------------------------------GCCCATAA-AA--CA-CAGC-CCGTA--AACTA
droBia1 scf7180000301754:1106426-1106816 + AATTTTAGTGAGT------GCTC-G-CTCAGTCCTACCGAGCAGC-G-CACCCGGAGCACGTAAGC--GCCG--GCGATCTAGCG--CCAAA-ATTAAA-----T--AATA--TTCG----------AAA------GTGTG-------CGA--TC-TGGGGTGT---------------------AT-------------CC--------ACAG-----------TCT-----------ATGATTTGTA-AATA------------------------------------------------------------------------------TTT-------C----CAATC----GTTATCATCTCTGCATGCCGCGTGTCAAACTTGTGTTGAAGTCAATCAAA----ATCCGC--AGT--------------CCCAAAATCCAT-ACTCGTATCTGATTAGTTT--GTTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CCC-----CCA-----GTAGCATGCTAGA---------AT-C-CAGAGCAC-------AGAACC-----------GT--AAACCATGATT-----------T-----CCTA----T--A--TACCACCC-ATTCAGACGCG---AACCGCTAA-GGCGACC------------------------------GCCCCCGTAAA--CA-CAGC-CCATT--AACTA
droTak1 scf7180000415138:90102-90466 + AATTTTAGAGAGT------GCTC-A-GTCAGTCCTCCCGAACAGCAG-AACCCGCAGCACGTAAGC--ACCG--GCGATCTAGCG--CCAAA-ATTAAA-----T--AATA--TTCG----------AAA------GTGTG-------TGA--TC-TGGGGGGAATC---------T-----ACTA--------------TATTA-CTAC---------------------------CTTTGATTTGTAAAATA------------------------------------------------------------------------------ATT-------C----CAATT----GTTATTATCTCTGCATGCCGCGTGTCAAACTTGCGTTAAAGTTAATC---------------------------------CCGAAATCCA------------GATTAGTTT--GTTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-CCCC-------------------------------------A-----CCCCCCA-----GTAGCATGCTGAA---------AT-C-CAGAGAG---------------------------------CATAATT-----------T-----CCTA----T--ATATACCATCC-CTTCAGAAGCG---AACCGCTAA-GGCGAGC------------------------------G------A-AA--CACCAAC-TTGTA--ACTTA
droEle1 scf7180000491214:2628942-2629340 - AATTTTAGAGAG-------TCTCCA-CTCAGTCCATCCGAACAGCAG-AAGTCGTAGCACGTAAGC--ACCG--GCGATCTAGCG--CCCAA-ATTAAA-----T--AGTA--TCCG--------CAAAA------GTGTG---TCTGCGA--TC-TGGGGGGAGCAG-----------------------------------TACCTAT---------------------------CCATGATTTGTCA--------------------------------------------------------------TACAAAATTCC----------------TACC----CAATC----GATACTATCAATGCATGCCGCGTGTCAAACTTGTGTTAAAGATAATCAA-----ATCCATAAAGA--------------ACCGAA-------------ATCCGTTTAGTTT-TGTTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTATG-C------------------------------------------CCC----CCCAGAGTAGTAGCATGCTGAG---------AT-C-CA----------------------------------AAACCATGATT-----------C--TATCCCA----TA-ATATACCACCC-ATTCAGACGCG---AACCGCTAAAGGCGAGA-----------------------------AGCCCAAAA-AA--CA-CAGG-CCGTTAAAAGTA
droRho1 scf7180000779263:374837-375253 + CATTTTATAGAG-------ACTC-A-CTCAGTCCTCCTGAACAGCAG-AAGCCGGAGCACGTAAGC--ACCG--GCGATCTAGCG--CCAAA-ATTAAA-----T--AATA--TTCA----------AAA------GTGTG-------CAA--TC-TGGGGGGGGGGGGG------GGGA-----A-----------------TA-CTAT---------------------------CTATGATTTGTTGAATA------------------------------------------------------------------------------AGTTCTATACC----CAATC----GTAATTATCTCTGCATGCCGCGTGTCAAACTTGTGTTAAAGATAATCAA-----ATCCATATAGC--------------CCCAAG-------------ATCCGTTTAGTTT--GTTTGTGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTT-T--TGGCACCCCCTCC-------------------------ACCC-----CCCA-----GTAGCATGCTGAG---------ACCC-CAAAAAGC-------AGATCC-----------GT--AAACCATGATT-----------T-----CCCA----TATATATACCACCC-ATTCAGAAGCG---AACCGCTAAAAGCGAGA------------------------------GCCCACAG-AA--CA-CAGC-CCGTA--AATTA
droFic1 scf7180000453773:125563-125958 - AATTTTAGAGAG-------TGTCTG-ACCAGTCTTCCCGAACAGCAG-AAGCCGGAGCACGTAAGC--ACCG--GCGATTGAGCG--CCAAAAATTAAA-----T-----A--GTTT----------AAA------TTGTG-------TGA--TC-TGGGGATA------------------TG-------------------TA-CTAT--CT-----------TTGAA-------------TTCAT------------------------------------------------------------------------------TAAAACAATTTTTTTTC----CAATCGTGTATTATTATCTCTGCATGCCGCGTGTCAAACTTGTGTTAAAGGCAATCAA-----ATAAGT--AGT--------------CTCGAA-------------ATCAGTTCAGTTT--ATTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CCC-----CCA-----GTAGCATGTT------------AC-C-CAGAAAGC-------TGAACC-----------GT--AAATCATGATA-----------T-----CCTATACATATATATACCATCC-ATTCAGACGCG---AACCGCTAAAGGCGATA------------------------------GCCCACAA-AACACA-CTGC-CTGTA--ACTAA
droKik1 scf7180000302476:22436-22846 - ATTTTTAGAGAG-------T----G-CTCAGTCCTCCCGAGCAGCAGAAGGCCGGAGCACGTAAGC--AACG--GCA----AGCGGCCCAAAAA--AAAAAATAT-----A--ATTTAAATAATT--ACC------GGGTCCGAGCAGCGCTCAC-TGGGGGCA------------------CCTC--------------TC--------GATC-----------TTT---------AAGT-ATTTAAACT-----------------------------------------------------------------------------------------CCCCCTTCGATT----GTCTTAATCTCTGCATGCCGCGTGTCCA----------AAGATAATCAAT----GCC--C--AGT--------------GTCAAAA---AAATCTCGTATCTGTTTAGTTTTCGTTT-TGCCACGTTG-----------------TTTGT-TTTCTGTGATTTAGTTTTGC------------------------------------------CC------CCA--GTAGCAGCATGCTGATCCCCGCTGAAA-C-CAGCAACCAGAACCCAGAACC-----------GT--ATACTATGTTT-----------T-----CAT--------------CCCCA-ATTCAGACGCC---AACCGCTAAAGGCGA--------------------------------GCCCACAG-AC-AGA-CAGCCCCGTA--AATTA
droAna3 scaffold_13266:890801-891238 - AATTTTAGAACACGCTCAGTCTCAGTCTCAGTCCTACCGAGTAGCAG-TAGCCGGAGCACGTAAGCCAACTGGAGCGGTCAAGCG--CCAAA-AA--AT-----TACCATA--TTCG----------AGTGTATTTGTGTG-------TGA--TCCTGGGGGAA-GAG----GGCCA-----GAAA--------------TC--------CTAATCGAAAAAAAA---------AC-ACTAGATTTGCA---------------------------------------------------------------AACAGAACTCACATTGAA---------------------C----CAAATTA--TCTGCATGCCGCGTGTCAAA-----GTCAATGATAATCTA------TCCGG--AGG--------------CACGAATT-CAA-ATCCGTATCTATTCAGTTT--AGCT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CCC--CCTCCA-----GTAGCATGCCAAA-------GAAA-C-CTGAAACCCCCCCCCAGACTC-----------GTATATAGTATGCTT-----------T-----CCTA----T--A------ACCC-ATTCAGACGCG---AACCGTTAAAGGCCA--------------------------------GCCCACAC-AG--TA-CAGCACCGCC--AGTGA
droBip1 scf7180000396730:1898134-1898559 - AATTTTAGAA----------CAC-G-CTCAGTCCTCCCGAGCAGCAG-AAGCCGGAGCACGTAAGCAAACCA--GCGGTCAAGCG--CCAAAAATTA---------CCATA--CTCG----------AGTGTATTTGTGTG-------TGA--TCCTGGGAGGGGTAGGGGAT--TAGGAAAAATA--------------TC--------CTAATCGAAT---AA---------AC-ACTAGATTTGCA---------------------------------------------------------------AACAGAAGTCACATTGAA---------------------C----CAAATTA--TCTGCATGCCGCGTGTCAAA-----GTCAATGATTATCTATCCGAATCCGG--AGG--------------CACGAATTCAAA-ATCCGTATCTGTTCAGTTT--AGCT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CCCCCCCTCCA-----GTAGCATGCCAAA-------GAAA-C-CTGAAACC-------AGACTC-----------GT--ATACTATGCTT-----------T-----CCTA----T--A------ACCC-ATTCAGACGCG---AACCGTTAAAGGCGA--------------------------------GCCCACAG-AA--CA-CCAC--CACC--AGTGA
dp5 3:11071830-11072308 - ATTTTTAGTGA----------TC-G-CTCAGTTCTCCTGAACACCAGGAAGCCGCAGCACGTAAGCA-AGTG--GCGGTCAAGCT--TCAAA-ATTAT------TACCAAAATTTC----------------------GTG-------TTT--AC-TGGGCGGAATAG----GCCA-------------------ATAAATC--------GGAAGGGGA-----------------------------------TTATAAATTAGAGACGCGGGGGATAGCTGAATATAATATTGACCAAATAGGTTTGGATATCCGAATATACGACG--------------------------------------------------------------------------------------------AACCGAACTATCAAGCTCGAAC--TGT-TGTTGAATAC---CCG-TG--GGTT-TGCCACGTTGAACCATCATTCTATTGGTTTGCTGTTGTGTGTTTTTGTTTG-CCCTAACACCTCTCCCAAAGCGTCGTAAATTTGCGCGTTATT-----CCCCCCA-----GTAA---------------------TT-ACACACGAGGAAA--------------------------CACAATTTTTTTAAGACATTGTAACC------------CTTCA-CC-CTTCAGACGCG---AACCGTTAA-GGCAAGCCCCCAGCTCCACCCACAGCCACAGCAAAGAGTGTAGTG-AA--GC-GAGC-CCAT--------
droPer2 scaffold_4:6390780-6391259 - ATTTTTAGTGA----------TC-G-CTCAGTTCTCCTGAACACCAGGAAGCCGCAGCACGTAAGCA-AGTG--GCGGTCAAGCT--TCAAA-ATTAT------TACCAAAATTTC----------------------GTG-------TTT--AC-TGGGCGGAATAG----GCCA-------------------ATAAATC--------GGAAGGGGA-----------------------------------TTATAAATTAGAGACGCGGGGGATAGCTGAATATAATATTGACCAAATAGGTTTGGATATCCGAATATACGACG--------------------------------------------------------------------------------------------AACCGAACTATCAAGCTCGAAC--TGT-TTTTGAATAC---CCG-TG--GGTT-TGCCACGTTGAACCATCATTCTATTGGTTTGCTGTTGTGTGTTTTTGTTTG-CCCTAACACCTCTCCCAAAGCGTCGTAAATTTGCGCGTTATT-----CCCCCCA-----GTAA---------------------TT-ACACACGAGGAAA--------------------------CACAATTTTTTTAAGACATTGTAACC------------CTTCACCC-CTTCAGACGCG---AACCGTTAA-GGCAAGCCCCCAGCTCCACCCACAGCCACAGCAAAGAGTGTAGTG-AA--GC-GAGC-CCAT--------
droWil2 scf2_1100000004513:495734-495739 - AAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_10324:383057-383154 - TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-------GGCTTTGATT------AAATTCTAAGATT-----------T-----TATA----A--T--TTCCACCCAATGCAGACGCAATAAACCGTTAA--GCAAGCC--C-------------------------AGCCCGTC--AA--CA-TA---ACGTT--AGTTA
droMoj3 scaffold_6496:2194919-2194951 - TAAAAGACAAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAAAGCCAAA------------------------------G----------------------CTA--AATCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CATTTTAGAGAG-------ACTC-A-TTCAGTCCTCCCAAACAGCCA-AAGCCGGAGCACGTAAGC--ACCG--GCGATCTAGCG--CCAAA-ATTAGT-----T--AATA--TTGG----------AAA------GTGTG-------TGA--TC-TGGGGGGA--------T--TA-----AATA--------------TC--------GTAG-----------TTT---------ATGTGATTTGTT--------------------------------------------------------------------------------------------------CAATC----GTTATTATCTCTGCATGCCGCGTGTCAAACTTGTGTTATAGATAATCAAA----ATC-------------------------------CAT-TTTCGAATCCGATTCGTTT--GTTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CCC---CTCCA-----GTAGCATGCTGAA---------AT-G-CAGAAAGTAGA-------ACCATAAACC------GAATACCATGATT-----------T-----CCTA----T--A--TACTATCC-ATTCAGACGCG---AACCGCTAAAGGCC----------------------------AAAGAGCCCACAG-AA--CA-CAGC-CCGTA--AATTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTAGA-------ACCATAAACC------GA.................................................................................................................................................1912.00201100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GTCAAACTTGTGTTATAGATA.........................................................................................................................................................................................................................................................................................................................................................................................................2112.00202000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------------------------AAAGAGCCCACAG-AA--CA-CAGC-CCGC........2611.00101000000000000000
........................................ACAGCCA-AAGCCGGAGCACGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
...................................CCCAAACAGCCA-AAGCCGGAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCC-ATTCAGACGCG---AACCGCTAA.......................................................................2611.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGTAGA-------ACCATAAACC------...................................................................................................................................................1911.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAGA-------ACCATAAACC------GAAT...............................................................................................................................................2011.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAG-AA--CA-CAGC-CCGTA--.....1711.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCC-ATTCAGACGCG---AACC............................................................................2111.00100100000000000000
......................................................GAGCACGTAAGC--ACCG--GCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC----------------------------AAAGAGCCCACAG-AA--CA-CAGC-CC..........2511.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................CATGCCGCGTGTCAAACTTGTGTT................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
.....................................CAAACAGCCA-AAGCCGGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
droSec2
AATTTTAGAGAG-------ACTC-A-TTCAGTCCTCCCAAACAGCCA-AAGCCGGAGCACGTAAGC--ACCG--GCGATCTAGCG--CCAAA-ATTAGT-----T--AATA--TTGG----------AAA------GTGTG-------TGA--TC-TGGGGGA---------T--TA-----AATA--------------TC--------GTAG-----------TTT---------ATGTGATTTGTA--------------------------------------------------------------------------------------------------CAATC----GTTATTATCTCTGCATGCCGCGTGTCAAACTTGTGTTATAGATAATCAAA----ATC-------------------------------CAT-TTTCGAATCCGATTCGTTT--GTTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CCC----CCCA-----GTAGCATGCTGAA---------AT-G-CTGAAAGTAGA-------ACCATAAACC------GAATACCATGATT-----------T-----CCTA----T--A--TACTATCC-ATTCAGACGCG---AACCGCTAA-GGCC----------------------------AAAGAGCCCACAG-AA--CA-CAGC-CCGTA--AATTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................CTCCCAAACAGCCA-AAGCCGGAGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTAA-GGCC----------------------------AAAGAGCCCACAG-AA--C...................2711.0010001
.................................................................................................GT-----T--AATA--TTGG----------AAA------GTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACC------GAATACCATGATT-----------T-----CCT..................................................................................................................2111.0011000
.................................................................................................................TTGG----------AAA------GTGTG-------TGA--TC-TGGGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGATTCGTTT--GTTT-TGCCA..........................................................................................................................................................................................................................................................................................................................2111.0010010
.........................................CAGCCA-AAGCCGGAGCACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---AACCGCTAA-GGCC----------------------------AAAGAGCC..............................2211.0010010
...............................................................................................................................................................................................................................................................................................................................................................C----GTTATTATCTCTGCATGC...................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---AACCGCTAA-GGCC----------------------------AAAGAGCCCACAG-A.......................2811.0010010
.....................................................GGAGCACGTAAGC--ACCG--GCGATCTAGCG--..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000
.......................................AACAGCCA-AAGCCGGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010010
dm3
AGTTTTAGAGAG-------ACTC-A-TTCAGTCCTCCCAAACAGCAG-AAGCCGGAGCACGTAAGC--ACCG--GCGATCTAGCG--CCAAA-ATTAGT-----T--AATA--TTGG----------AAA------GTGTG-------CGA--TT-TGGGGGGGA-------T--TA-----AATA--------------TC--------GTAG-----------TTT---------ATGTGATTTGTA--------------------------------------------------------------------------------------------------CAATC----GTTATTATCTCTGCATGCCGCGTGTCAAACTTGTGTTATAGATAATCAAA----ATC-------------------------------CAT-TTTCGAATTCGATTCGTTT--GTTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CCC----CCCA-----ATAGCATGCTGAA---------AT-G-CAGAAAGTAGA-------ACCATAAACC------GAATACCATGATT-----------T-----CCTA----T--A--TACCATCC-ATTCAGACGCG---AACCGCTAAAAGCC----------------------------AAAGAGCCCACAG-AA--CC-CAGC-CCGTA--AATTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................AGCCGGAGCACGTAAGC--A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTAAAAGCC----------------------------AAAGAGCC..............................1917.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTAAAAGCC----------------------------AAAGAGCCCACAG-........................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CTCCCAAACAGCAG-AAGCCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAG-AA--CC-CAGC-CCGTA--.....1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGCC----------------------------AAAGAGCCCACAG-AA--CC-C................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTTAGAGAG-------ACTC-A-TTCAGTCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................ACAGCAG-AAGCCGGAGCACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.....TAGAGAG-------ACTC-A-TTCAGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC----------------------------AAAGAGCCCACAG-AA--CC-CAG..............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTCGTTT--GTTT-TGCCACG........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..............................................................................................TTAGT-----T--AATA--TTGG----------AAA------GTGTG-------CGA--................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................CACGTAAGC--ACCG--GCGATCTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---AACCGCTAAAAGCC----------------------------AAAGAGCCCACA..........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................CCAAACAGCAG-AAGCCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................ACGTAAGC--ACCG--GCGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCCACAG-AA--CC-CAGC-CCG.........2011.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AGT-----T--AATA--TTGG----------AAA------GTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................GGAGCACGTAAGC--ACCG--GCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.......................................AACAGCAG-AAGCCGGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................G-AAGCCGGAGCACGTAAGC--ACCG--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATTCGTTT--GTTT-TGCCACG........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................ATA--TTGG----------AAA------GTGTG-------CGA--TT-TGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGCCCACAG-AA--CC-C................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GCACGTAAGC--ACCG--GCGATCTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGCCCACAG-AA--CC-CAGC-CCGT........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCC----------------------------AAAGAGCCCACA..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCC----------------------------AAAGAGCCCACAG-AA--C...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CAG-AAGCCGGAGCACGTAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCC----------------------------AAAGAGCCCACAG-AA--CC-CA...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT-TGCCACGTTG-----------------TTTGT--TTC..........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AAGC--ACCG--GCGATCTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----T--A--TACCATCC-ATTCAGACGC....................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TCTCTGCATGCCGCGTGTCAAACTTG....................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--A--TACCATCC-ATTCAGACGCG---AACCGC..........................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTT-TGCCACGTTG-----------------TTTGT--TTCTGTGA.....................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................GT-----T--AATA--TTGG----------AAA------GTGTG-------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............................................................................................................................................................................................................................................................................................................................................................................................TCAAACTTGTGTTATAGATAATCAAA----A..............................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AGT-----T--AATA--TTGG----------AAA------GTGTG-------CGA--TT-.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC----------------------------AAAGAGCCCACAG-AA--CC-CAGC-CCG.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-C------------------------------------------CCC----CCCA-----ATAGCATGCTGAA---------AT-.......................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GTCCTCCCAAACAGCAG-AAGCCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TC-A-TTCAGTCCTCCCAAACAGCAG-AA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................ATC----GTTATTATCTCTGCATGCCGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCGATTCGTTT--GTTT-TG.............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................ATTATCTCTGCATGCCGCGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..............................GTCCTCCCAAACAGCAG-A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................G-------CGA--TT-TGGGGGGGA-------T--TA-----A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................CAAACAGCAG-AAGCCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................ATCTAGCG--CCAAA-ATTAGT-----T--..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.................................................................................................................TTGG----------AAA------GTGTG-------CGA--TT-TGGGGGGGA-------T--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCATGCTGAA---------AT-G-CAGAAAGTAGA-------AC.................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGCCCACAG-AA--CC-CAGC-CC..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................A--------------------------------------------------------------------------------------------------CAATC----GTTATTATCTCTGCATGC...................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TTCAGTCCTCCCAAACAGCAG-AAGCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CC..............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TG-------CGA--TT-TGGGGGGGA-------T--GT-----...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
droEre2
ACTTTTAGAGAG-------ACTC-A-TTCAGTCCTGCCAAACCTCAG-AAGCCGCAGCACGTAAGC--ACCG--GCGATCTAGCG--CCAAA-AGTAGT-----T--AATA--TTGG----------AAA------GTGTG-------TGA--GC-TGGGGAAA--------------------TATCATATCATA----TC--------ATAG-----------TTT---------ATGTGATTTGTACAATA------------------------------------------------------------------------------GTT-------T----CATTC----GTTATTATCTCTGCATGCCGCGTGTCAAACTTGTGTTAAAGATAATCGAA----ATC-------------------------------CAT-TTTCGAGTACGATTAGTTT--ATTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CCC-----CCA-----GTAGCATGCTGAA---------AT-G-CAGAAACTAGA-------ACCATAAACCAACC--GAATACCATGATT-----------T-----CCTA----T--A--TACCATCC-ATTCAGACGCG---AACCGCTAAAGGCGAGA------------------------------GCCCACAG-AA--CA-CAGC-CCGTA--AATTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................AAACCTCAG-AAGCCGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020001010
.............................................................................................................................................................................................................................................................................................................................................................................................CAAACTTGTGTTAAAGATAATCGA....................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGA------------------------------GCCCACAG-AA--CA-CAGC-CCG.........2511.0011000000
.....................................CAAACCTCAG-AAGCCGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAGA------------------------------GCCCACAG-AA--CA-CAGC-CCGTA--.....2811.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTAAAGGCGAGA------------------------------GCCCACA..........................2211.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCG---AACCGCTAAAGGC...................................................................1811.0010100000
....................................CCAAACCTCAG-AAGCCGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGCTAAAGGCGAGA------------------------------GCCCACAG-........................2411.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTAAAGGCGAGA------------------------------GCCCACAG-AA--CA-C................2811.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAGA------------------------------GCCCACAG-AA--CA-CAGC-CCGT........2711.0010100000
...................................GCCAAACCTCAG-AAGCCGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAAGGCGAGA------------------------------GCCCACAG-........................2111.0010000010
..................................TGCCAAACCTCAG-AAGCCGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
....................................................CGCAGCACGTAAGC--ACCG--GCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
...............................................................................................TAGT-----T--AATA--TTGG----------AAA------GTGTG-------T....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.........................................CCTCAG-AAGCCGCAGCACAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010100000
droYak3
AATTTTAGAGAG-------ACTC-A-TTCAGTCCTCCCAAACCGCAG-AAGCCAAAGCACGTAAGC--ACCG--GCGATCTATTA-ACTAAA-ATTAGT-----T--AGCA--TTGG----------AAA------GTGTG-------TGA--TC-TGGGGGAA------------A-----AATA--------------TC--------ATAG-----------TTTAAGTGATTAATGTGATTTGTACAATA------------------------------------------------------------------------------GCT-------T----TAGTC----GGTTTTATCTCTGCATGCCGCGTGTCAAACTTGTGTTAAAGATAATGAAA----ATC-------------------------------CAT-TTTTGAATATGATTAGTTT--GTTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CCC-----CCA-----GTAGCATGCTGAA---------GT-G-CAGAAACTAGA-------ACCATAAACC------GAATACCATGATT-----------T-----CCTA----T--A--TACCATCC-ATTCAGACGCG---AACCGCTAAAGGCGAGA------------------------------GCCCACAG-AA--CA-CAGC-CCGTA--AATTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGCTAAAGGCGAGA------------------------------GCCCACAG-........................2412.00200010010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------GCCCACAG-AA--CA-CAGC-CC..........1912.00201100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGATTAGTTT--GTTT-TGCC...........................................................................................................................................................................................................................................................................................................................2111.00100100000000
.................................................................................................................................................................................................................................................GATTTGTACAATA------------------------------------------------------------------------------GCT-------T----TAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAGA------------------------------GCCCACAG-AA--CA-CAGC-CCGT........2711.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................TATCTCTGCATGCCGCGTGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..................................................GCCAAAGCACGTAAGC--ACCG--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---AACCGCTAAAGGCGAGA------------------------------GC...............................2011.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----GTAGCATGCTGAA---------GT-G-CAGA.................................................................................................................................................................................2111.00100000010000
......................................AAACCGCAG-AAGCCAAAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...................................CCCAAACCGCAG-AAGCCAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCACAG-AA--CA-CAGC-CCGT........2011.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA------------------------------GCCCACAG-AA--CA-CAGC-CCGTA--.....2311.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGCTAAAGGCGAGA------------------------------GCCCAC...........................2311.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGCTAAAGGCGAGA------------------------------GCCCACAG-AA--....................2711.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTA----T--A--TACCATCC-ATTCAGACGC....................................................................................2311.00100000010000
..........................................CGCAG-AAGCCAAAGCACACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.07101000000000
droEug1
CATTTTAGAGAGT------GTTC-A-TTCAGTCCCACCGAACAGCAG-AAGCCGGAGCACGTAAGC--ACCG--GCGATCTAGCG--CCAAA-ATTAAG-----A--GATA--TTTA----------AAA------GTCTG-------TGT--GC-TGGGGGGAATAA----T--TA-----A------------ATAA------------AAT-----------TTT---------TTTTGATTTGTAAAATATTTTAAATT-------------------------------------------------------------------------------A----AAATC----GTTATTTTCACTGCATGCCGCGTGTCAAGCTTGTGTTACAGATAATCTAA----GACCGT--AGT--------------ACTAAAATCTAT-TCTCGTATCAGATTAGTTTCTTTTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CC------CCA-----GTAGCATGCTAGA-------T-AT-C-CAGAGACT-------AGAACC-----------GT--AAACCATGATT-----------T-----CCTA----T--ATGTACCACCC-ATTCAGACGCG---AACCGCTAAAGGCGAGA------------------------------GCCCATAA-AA--CA-CAGC-CCGTA--AACTASizeHit CountTotal NormTotal
No Reads
droBia1
AATTTTAGTGAGT------GCTC-G-CTCAGTCCTACCGAGCAGC-G-CACCCGGAGCACGTAAGC--GCCG--GCGATCTAGCG--CCAAA-ATTAAA-----T--AATA--TTCG----------AAA------GTGTG-------CGA--TC-TGGGGTGT---------------------AT-------------CC--------ACAG-----------TCT-----------ATGATTTGTA-AATA------------------------------------------------------------------------------TTT-------C----CAATC----GTTATCATCTCTGCATGCCGCGTGTCAAACTTGTGTTGAAGTCAATCAAA----ATCCGC--AGT--------------CCCAAAATCCAT-ACTCGTATCTGATTAGTTT--GTTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CCC-----CCA-----GTAGCATGCTAGA---------AT-C-CAGAGCAC-------AGAACC-----------GT--AAACCATGATT-----------T-----CCTA----T--A--TACCACCC-ATTCAGACGCG---AACCGCTAA-GGCGACC------------------------------GCCCCCGTAAA--CA-CAGC-CCATT--AACTASizeHit CountTotal NormTotal
No Reads
droTak1
AATTTTAGAGAGT------GCTC-A-GTCAGTCCTCCCGAACAGCAG-AACCCGCAGCACGTAAGC--ACCG--GCGATCTAGCG--CCAAA-ATTAAA-----T--AATA--TTCG----------AAA------GTGTG-------TGA--TC-TGGGGGGAATC---------T-----ACTA--------------TATTA-CTAC---------------------------CTTTGATTTGTAAAATA------------------------------------------------------------------------------ATT-------C----CAATT----GTTATTATCTCTGCATGCCGCGTGTCAAACTTGCGTTAAAGTTAATC---------------------------------CCGAAATCCA------------GATTAGTTT--GTTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-CCCC-------------------------------------A-----CCCCCCA-----GTAGCATGCTGAA---------AT-C-CAGAGAG---------------------------------CATAATT-----------T-----CCTA----T--ATATACCATCC-CTTCAGAAGCG---AACCGCTAA-GGCGAGC------------------------------G------A-AA--CACCAAC-TTGTA--ACTTASizeHit CountTotal NormTotal
No Reads
droEle1
AATTTTAGAGAG-------TCTCCA-CTCAGTCCATCCGAACAGCAG-AAGTCGTAGCACGTAAGC--ACCG--GCGATCTAGCG--CCCAA-ATTAAA-----T--AGTA--TCCG--------CAAAA------GTGTG---TCTGCGA--TC-TGGGGGGAGCAG-----------------------------------TACCTAT---------------------------CCATGATTTGTCA--------------------------------------------------------------TACAAAATTCC----------------TACC----CAATC----GATACTATCAATGCATGCCGCGTGTCAAACTTGTGTTAAAGATAATCAA-----ATCCATAAAGA--------------ACCGAA-------------ATCCGTTTAGTTT-TGTTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTATG-C------------------------------------------CCC----CCCAGAGTAGTAGCATGCTGAG---------AT-C-CA----------------------------------AAACCATGATT-----------C--TATCCCA----TA-ATATACCACCC-ATTCAGACGCG---AACCGCTAAAGGCGAGA-----------------------------AGCCCAAAA-AA--CA-CAGG-CCGTTAAAAGTASizeHit CountTotal NormTotal
No Reads
droRho1
CATTTTATAGAG-------ACTC-A-CTCAGTCCTCCTGAACAGCAG-AAGCCGGAGCACGTAAGC--ACCG--GCGATCTAGCG--CCAAA-ATTAAA-----T--AATA--TTCA----------AAA------GTGTG-------CAA--TC-TGGGGGGGGGGGGG------GGGA-----A-----------------TA-CTAT---------------------------CTATGATTTGTTGAATA------------------------------------------------------------------------------AGTTCTATACC----CAATC----GTAATTATCTCTGCATGCCGCGTGTCAAACTTGTGTTAAAGATAATCAA-----ATCCATATAGC--------------CCCAAG-------------ATCCGTTTAGTTT--GTTTGTGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTT-T--TGGCACCCCCTCC-------------------------ACCC-----CCCA-----GTAGCATGCTGAG---------ACCC-CAAAAAGC-------AGATCC-----------GT--AAACCATGATT-----------T-----CCCA----TATATATACCACCC-ATTCAGAAGCG---AACCGCTAAAAGCGAGA------------------------------GCCCACAG-AA--CA-CAGC-CCGTA--AATTASizeHit CountTotal NormTotal
No Reads
droFic1
AATTTTAGAGAG-------TGTCTG-ACCAGTCTTCCCGAACAGCAG-AAGCCGGAGCACGTAAGC--ACCG--GCGATTGAGCG--CCAAAAATTAAA-----T-----A--GTTT----------AAA------TTGTG-------TGA--TC-TGGGGATA------------------TG-------------------TA-CTAT--CT-----------TTGAA-------------TTCAT------------------------------------------------------------------------------TAAAACAATTTTTTTTC----CAATCGTGTATTATTATCTCTGCATGCCGCGTGTCAAACTTGTGTTAAAGGCAATCAA-----ATAAGT--AGT--------------CTCGAA-------------ATCAGTTCAGTTT--ATTT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CCC-----CCA-----GTAGCATGTT------------AC-C-CAGAAAGC-------TGAACC-----------GT--AAATCATGATA-----------T-----CCTATACATATATATACCATCC-ATTCAGACGCG---AACCGCTAAAGGCGATA------------------------------GCCCACAA-AACACA-CTGC-CTGTA--ACTAASizeHit CountTotal NormTotal
No Reads
droKik1
ATTTTTAGAGAG-------T----G-CTCAGTCCTCCCGAGCAGCAGAAGGCCGGAGCACGTAAGC--AACG--GCA----AGCGGCCCAAAAA--AAAAAATAT-----A--ATTTAAATAATT--ACC------GGGTCCGAGCAGCGCTCAC-TGGGGGCA------------------CCTC--------------TC--------GATC-----------TTT---------AAGT-ATTTAAACT-----------------------------------------------------------------------------------------CCCCCTTCGATT----GTCTTAATCTCTGCATGCCGCGTGTCCA----------AAGATAATCAAT----GCC--C--AGT--------------GTCAAAA---AAATCTCGTATCTGTTTAGTTTTCGTTT-TGCCACGTTG-----------------TTTGT-TTTCTGTGATTTAGTTTTGC------------------------------------------CC------CCA--GTAGCAGCATGCTGATCCCCGCTGAAA-C-CAGCAACCAGAACCCAGAACC-----------GT--ATACTATGTTT-----------T-----CAT--------------CCCCA-ATTCAGACGCC---AACCGCTAAAGGCGA--------------------------------GCCCACAG-AC-AGA-CAGCCCCGTA--AATTASizeHit CountTotal NormTotal
No Reads
droAna3
AATTTTAGAACACGCTCAGTCTCAGTCTCAGTCCTACCGAGTAGCAG-TAGCCGGAGCACGTAAGCCAACTGGAGCGGTCAAGCG--CCAAA-AA--AT-----TACCATA--TTCG----------AGTGTATTTGTGTG-------TGA--TCCTGGGGGAA-GAG----GGCCA-----GAAA--------------TC--------CTAATCGAAAAAAAA---------AC-ACTAGATTTGCA---------------------------------------------------------------AACAGAACTCACATTGAA---------------------C----CAAATTA--TCTGCATGCCGCGTGTCAAA-----GTCAATGATAATCTA------TCCGG--AGG--------------CACGAATT-CAA-ATCCGTATCTATTCAGTTT--AGCT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CCC--CCTCCA-----GTAGCATGCCAAA-------GAAA-C-CTGAAACCCCCCCCCAGACTC-----------GTATATAGTATGCTT-----------T-----CCTA----T--A------ACCC-ATTCAGACGCG---AACCGTTAAAGGCCA--------------------------------GCCCACAC-AG--TA-CAGCACCGCC--AGTGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................AGTCCTACCGAGTAGCAG-T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002002000
..............................................................AAGCCAACTGGAGCGGTCAAGCG--CC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..........................CTCAGTCCTACCGAGTAGCAG-TAGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
............................CAGTCCTACCGAGTAGCAG-TAGCCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
................................CCTACCGAGTAGCAG-TAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.....................................CGAGTAGCAG-TAGCCGGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.................AGTCTCAGTCTCAGTCCTACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.............................AGTCCTACCGAGTAGCAG-TAGCCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.................................CTACCGAGTAGCAG-TAGCCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.................................CTACCGAGTAGCAG-TAGCCGGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACAC-AG--TA-CAGCACCGCC--AGT..2311.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---AACCGTTAAAGGCCA--------------------------------GCCCACAC-AG--T...................2711.001010000
..................GTCTCAGTCTCAGTCCTACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.......................................................................................................................................................................................................................................................................................................................................................................ATTA--TCTGCATGCCGCGTGTCAAC-----...................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100
............................................................GTAAGCCAACTGGAGCGGTCAAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAGGCCA--------------------------------GCCCACAC-AG--TA-.................2311.001100000
..................................TACCGAGTAGCAG-TAGCCGGAGCACAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
............................CAGTCCTACCGAGTAGCAG-T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
droBip1
AATTTTAGAA----------CAC-G-CTCAGTCCTCCCGAGCAGCAG-AAGCCGGAGCACGTAAGCAAACCA--GCGGTCAAGCG--CCAAAAATTA---------CCATA--CTCG----------AGTGTATTTGTGTG-------TGA--TCCTGGGAGGGGTAGGGGAT--TAGGAAAAATA--------------TC--------CTAATCGAAT---AA---------AC-ACTAGATTTGCA---------------------------------------------------------------AACAGAAGTCACATTGAA---------------------C----CAAATTA--TCTGCATGCCGCGTGTCAAA-----GTCAATGATTATCTATCCGAATCCGG--AGG--------------CACGAATTCAAA-ATCCGTATCTGTTCAGTTT--AGCT-TGCCACGTTG-----------------TTTGT--TTCTGTGATTTTGTTTG-C------------------------------------------CCCCCCCTCCA-----GTAGCATGCCAAA-------GAAA-C-CTGAAACC-------AGACTC-----------GT--ATACTATGCTT-----------T-----CCTA----T--A------ACCC-ATTCAGACGCG---AACCGTTAAAGGCGA--------------------------------GCCCACAG-AA--CA-CCAC--CACC--AGTGASizeHit CountTotal NormTotal
No Reads
dp5
ATTTTTAGTGA----------TC-G-CTCAGTTCTCCTGAACACCAGGAAGCCGCAGCACGTAAGCA-AGTG--GCGGTCAAGCT--TCAAA-ATTAT------TACCAAAATTTC----------------------GTG-------TTT--AC-TGGGCGGAATAG----GCCA-------------------ATAAATC--------GGAAGGGGA-----------------------------------TTATAAATTAGAGACGCGGGGGATAGCTGAATATAATATTGACCAAATAGGTTTGGATATCCGAATATACGACG--------------------------------------------------------------------------------------------AACCGAACTATCAAGCTCGAAC--TGT-TGTTGAATAC---CCG-TG--GGTT-TGCCACGTTGAACCATCATTCTATTGGTTTGCTGTTGTGTGTTTTTGTTTG-CCCTAACACCTCTCCCAAAGCGTCGTAAATTTGCGCGTTATT-----CCCCCCA-----GTAA---------------------TT-ACACACGAGGAAA--------------------------CACAATTTTTTTAAGACATTGTAACC------------CTTCA-CC-CTTCAGACGCG---AACCGTTAA-GGCAAGCCCCCAGCTCCACCCACAGCCACAGCAAAGAGTGTAGTG-AA--GC-GAGC-CCAT--------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................GAACACCAGGAAGCCGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020100100000
.............................AGTTCTCCTGAACACCAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
........................................................GCACGTAAGCA-AGTG--GCGGTCAAGCT--TC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAAGCTCGAAC--TGT-TGTTGA...................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..........................................................................................................................................................................................................................................................................GACGCGGGGGATAGCTGAATATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..........................................................ACGTAAGCA-AGTG--GCGGTCAAGCT--T.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGTAGTG-AA--GC-GAGC-CC..........2011.0010100000000
....................................................................................................................................................................ATAG----GCCA-------------------ATAAATC--------GGAAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCGCGTTATT-----CCCCCCA-----................................................................................................................................................................................................................2111.0010100000000
...............................TTCTCCTGAACACCAGGAAGCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
......................................GAACACCAGGAAGCCGCAGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCG---AACCGTTAA-GGCAAGC...............................................................1911.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTGCGCGTTATT-----CCCCCCA-----GTA.............................................................................................................................................................................................................2611.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTGCTGTTGTGTGTT....................................................................................................................................................................................................................................................................................1911.0010100000000
..................................................................................................................................................................................................................................................................................................................................ACGACG--------------------------------------------------------------------------------------------AACCGAACTATCAAGCT....................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACAGCCACAGCAAAGAGTGTAGT..........................2511.0010000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAATAC---CCG-TG--GGTT-TGCC...........................................................................................................................................................................................................................................................................................................................2111.0010001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAC--TGT-TGTTGAATAC---CCG-T.......................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................GAGACGCGGGGGATAGCTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CGAACTATCAAGCTCGAAC--TGT-T........................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
droPer2
ATTTTTAGTGA----------TC-G-CTCAGTTCTCCTGAACACCAGGAAGCCGCAGCACGTAAGCA-AGTG--GCGGTCAAGCT--TCAAA-ATTAT------TACCAAAATTTC----------------------GTG-------TTT--AC-TGGGCGGAATAG----GCCA-------------------ATAAATC--------GGAAGGGGA-----------------------------------TTATAAATTAGAGACGCGGGGGATAGCTGAATATAATATTGACCAAATAGGTTTGGATATCCGAATATACGACG--------------------------------------------------------------------------------------------AACCGAACTATCAAGCTCGAAC--TGT-TTTTGAATAC---CCG-TG--GGTT-TGCCACGTTGAACCATCATTCTATTGGTTTGCTGTTGTGTGTTTTTGTTTG-CCCTAACACCTCTCCCAAAGCGTCGTAAATTTGCGCGTTATT-----CCCCCCA-----GTAA---------------------TT-ACACACGAGGAAA--------------------------CACAATTTTTTTAAGACATTGTAACC------------CTTCACCC-CTTCAGACGCG---AACCGTTAA-GGCAAGCCCCCAGCTCCACCCACAGCCACAGCAAAGAGTGTAGTG-AA--GC-GAGC-CCAT--------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................TGAACACCAGGAAGCCGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.004400000
.....................................TGAACACCAGGAAGCCGCAGCACACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.004400000
....................................CTGAACACCAGGAAGCCGCAGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.003300000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAC--TGT-TTTTGAATAC---C...........................................................................................................................................................................................................................................................................................................................................1913.003300000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAAGCTCGAAC--TGT-TTTTGAATAC---CC..........................................................................................................................................................................................................................................................................................................................................2913.003300000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAC--TGT-TTTTGAATAC---CCG-TG--G...................................................................................................................................................................................................................................................................................................................................2512.002200000
....................................................................................................................................................................ATAG----GCCA-------------------ATAAATC--------GGAAGGGGA-----------------------------------TT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
...............................................................................................................ATTTC----------------------GTG-------TTT--AC-TGGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
..............................................................................................................................................................................................................................................................................................................................ATATACGACG--------------------------------------------------------------------------------------------AACCGAACTATCAAGCTC...................................................................................................................................................................................................................................................................................................................................................................2812.002200000
.....................................TGAACACCAGGAAGCCGCAGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002200000
.....................................TGAACACCAGGAAGCCGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAC--TGT-TTTTGAATAC---CCG-T.......................................................................................................................................................................................................................................................................................................................................2212.002200000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGTAGTG-AA--GC-GAGC-CC..........2011.001100000
.....................................TGAACACCAGGAAGCCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.....................................TGAACACCAGGAAGCCGCAGCACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
............................................................................................................AAAATTTC----------------------GTG-------TTT--AC-TGGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...................................................................................................................................................................AATAG----GCCA-------------------ATAAATC--------GGAAGGGGA-----------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
.............................................................................................................AAATTTC----------------------GTG-------TTT--AC-TGGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CGAACTATCAAGCTCGAAC--TG...........................................................................................................................................................................................................................................................................................................................................................2111.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCAAGCTCGAAC--TGT-TTTTGA...................................................................................................................................................................................................................................................................................................................................................2411.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCA-----GTAA---------------------TT-ACACACGAG...........................................................................................................................................................................2011.001001000
....................................CTGAACACCAGGAAGCCGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAC--TGT-TTTTGAATAC---CCG-C.......................................................................................................................................................................................................................................................................................................................................2211.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAC--TGT-TTTTGAATAC---CCG-TG--G...................................................................................................................................................................................................................................................................................................................................2411.001100000
..............................................................................................................................................................................CA-------------------ATAAATC--------GGAAGGGGA-----------------------------------TTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCAAGCTCGAAC--TGT-TTT......................................................................................................................................................................................................................................................................................................................................................2111.001010000
...................................................................................................................................................................AATAG----GCCA-------------------ATAAATC--------GGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
droWil2
AAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-------GGCTTTGATT------AAATTCTAAGATT-----------T-----TATA----A--T--TTCCACCCAATGCAGACGCAATAAACCGTTAA--GCAAGCC--C-------------------------AGCCCGTC--AA--CA-TA---ACGTT--AGTTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATAAACCGTTAA--GCAAGCC--C-------------------------AGC...............................2611.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCGTTAA--GCAAGCC--C-------------------------AG................................2011.001000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATAAACCGTTAA--GCAAGCC--C-------------------------AGCCC.............................2711.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAA--GCAAGCC--C-------------------------AGCCCGT...........................1911.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCC--C-------------------------AGCCCGTC--AA--CA-TA---A...........2211.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAACCGTTAA--GCAAGCC--C-------------------------AGCCCGTC--........................2811.001000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCCAATGCAGACGCA...................................................................................1830.331000000000000000000000000000000000000000000000000000000000001000
droMoj3
TAAAAGACAAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAAAGCCAAA------------------------------G----------------------CTA--AATCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
TAAAAGACAAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAAAGCCAAA------------------------------G----------------------C.........2611.001100000

Generated: 05/19/2015 at 01:52 AM