ID:

dsi_3045

 Coordinate:

3l:3248434-3248704 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-46.0 -45.8 -45.7

Flybase annnotation

exon [3l_3248705_3248872_+]; CDS [3l_3248705_3248872_+]; exon [3l_3248243_3248433_+]; CDS [3l_3248243_3248433_+]; intron [3l_3248434_3248704_+]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACATTCAGAAGAAGACATTCACAAAATGGATGAACTCCTTTCTGATCAAGGTGGGTAAACTACTTGGGTCACTTCCAATACTTGTAATTCAATTACTATTAAGTAGAAATGAAAGAAATGCTTTGTTTTGCTAAGCCCATAAAGTTTTCATTGTTTTAAAACTATAATTTCTCGATCAAAGTGATGTATTCAAATGAAAGCGCCATATGTATATGACATTCGAAATTATACATTCACTTGAAATTTTGATTGGAAGAAACTTTTATGGCACCACCAATTTATGAATGCAACTCACATTTGGGCTTATCGTCTTCTTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
**************************************************((((.....))))(((((.....)))))((((((((((...)))))....)))))..(((((((.....(((((((...((...))..)))))))))))))).........((((((.....(((((((((((((((((((((((......((((((.((......((.((((((((...((......)).)))))))).))......))...)))))).......)))..))))))))..)))).)))).....))))......))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 M053
female body
 M023
head
 O001
Testis
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
...............................GAACTCCTTTCTGATCAAGGC............................................................................................................................................................................................................................................................................................................................... 21 1 1 25.00 25 13 12 0 0 0 0 0 0 0
...............................GAACTCCTTTCTGATCAAGGCC.............................................................................................................................................................................................................................................................................................................................. 22 2 1 21.00 21 14 6 1 0 0 0 0 0 0
................ATTCACAAAATGGATGAACTCCTTTCT........................................................................................................................................................................................................................................................................................................................................ 27 0 1 5.00 5 3 0 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................GTCGAAGACCTATTCACAGACCTGGC............ 26 0 1 3.00 3 0 3 0 0 0 0 0 0 0
............................GATGAACTCCTTTCTGATCAAGGCC.............................................................................................................................................................................................................................................................................................................................. 25 2 1 2.00 2 2 0 0 0 0 0 0 0 0
.........................ATGGATGAACTCCTTTCTGATCAAGGC............................................................................................................................................................................................................................................................................................................................... 27 1 1 2.00 2 0 1 1 0 0 0 0 0 0
............................GATGAACTCCTTTCTGATCAAGGC............................................................................................................................................................................................................................................................................................................................... 24 1 1 2.00 2 0 2 0 0 0 0 0 0 0
................ATTCACAAAATGGATGAACTCCTTTC......................................................................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................AAAATGGAGGTCGAAGACCT........................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................AGGCCAAAATGGAGGTCGAAGACCT........................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................CTATTCACAGACCTGGCCGATGGC..... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0
...............................GAACTCCTTTCTGATCAAGGCA.............................................................................................................................................................................................................................................................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0
................ATTCACAAAATGGATGAACTCCTTTCTG....................................................................................................................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................ATAATTTCTCGATCAAAGTGAT.......................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...TTCAGAAGAAGACATTCACAAAATGGAT.................................................................................................................................................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................TTCACAAAATGGATGAACTCCTTTCT........................................................................................................................................................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................ATGGATGAACTCCTTTCTGATCAAGGCC.............................................................................................................................................................................................................................................................................................................................. 28 2 1 1.00 1 0 1 0 0 0 0 0 0 0
................................AACTCCTTTCTGATCAAGGCC.............................................................................................................................................................................................................................................................................................................................. 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................CACAGACCTGGCCGATGGC..... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................GATCAAAGAGATGTATTC.................................................................................................................................................................................... 18 1 1 1.00 1 0 0 0 0 1 0 0 0 0
..................................CTCCTTTCTGATCAAGGCC.............................................................................................................................................................................................................................................................................................................................. 19 2 1 1.00 1 0 0 0 1 0 0 0 0 0
...........................GGATGAACTCCTTTCTGATCAAGGC............................................................................................................................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................TGGATCACCTCCTTTCT........................................................................................................................................................................................................................................................................................................................................ 17 2 20 0.60 12 0 0 0 0 0 0 11 1 0
...............................GAACTCCTTTCTGATCAAAGC............................................................................................................................................................................................................................................................................................................................... 21 2 2 0.50 1 0 1 0 0 0 0 0 0 0
.......................................TTTTGATCAAGGTTGGTAAA........................................................................................................................................................................................................................................................................................................................ 20 2 4 0.25 1 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................................................................................................................................................................TGTTGTCCAAAATGGAGGTCT.................................. 21 3 4 0.25 1 0 0 0 0 0 0 0 0 1
..CTTCAGAAGAAGACAT................................................................................................................................................................................................................................................................................................................................................................. 16 1 7 0.14 1 0 0 0 0 0 0 0 1 0
...................................TCCTTTCTGATCAAGGCC.............................................................................................................................................................................................................................................................................................................................. 18 2 9 0.11 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................CTTTGAAGGCCGAAGTGGAG...................................... 20 3 15 0.07 1 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................................................................................................ACTTGAGATTTTGAT......................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 1 0 0
..............................TGAAATCCTTTCTGA...................................................................................................................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 1 0 0
..........................TGGATTACCTCCTTTCT........................................................................................................................................................................................................................................................................................................................................ 17 2 20 0.05 1 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

TGTAAGTCTTCTTCTGTAAGTGTTTTACCTACTTGAGGAAAGACTAGTTCCACCCATTTGATGAACCCAGTGAAGGTTATGAACATTAAGTTAATGATAATTCATCTTTACTTTCTTTACGAAACAAAACGATTCGGGTATTTCAAAAGTAACAAAATTTTGATATTAAAGAGCTAGTTTCACTACATAAGTTTACTTTCGCGGTATACATATACTGTAAGCTTTAATATGTAAGTGAACTTTAAAACTAACCTTCTTTGAAAATACCGTGGTGGTTAAATACTTACGTTGAGTGTAAACCCGAATAGCAGAAGAAACATCCGGTTTTACCTCCAGCTTCTGGATAAGTGTCTGGACCGGCTACCGTAGTT
**************************************************((((.....))))(((((.....)))))((((((((((...)))))....)))))..(((((((.....(((((((...((...))..)))))))))))))).........((((((.....(((((((((((((((((((((((......((((((.((......((.((((((((...((......)).)))))))).))......))...)))))).......)))..))))))))..)))).)))).....))))......))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
...................................................................................................................................................................................................................................................................................................................................GTCTTACCTTCAGCTTCTGCAT.......................... 22 3 2 0.50 1 0 1 0 0 0 0
...AAGTCTTCTTCTGTA................................................................................................................................................................................................................................................................................................................................................................. 15 0 2 0.50 1 1 0 0 0 0 0
................................TTGAGGACAGACGAGTACCA............................................................................................................................................................................................................................................................................................................................... 20 3 8 0.25 2 0 0 2 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................AAGTGTCTGGACCGA........... 15 1 7 0.14 1 0 0 0 1 0 0
.....................................................................................................................................................................................................................................................................AAATACCGTAGTGGTT.............................................................................................. 16 1 11 0.09 1 1 0 0 0 0 0
...................................AGGAAACACTAGTTC................................................................................................................................................................................................................................................................................................................................. 15 1 11 0.09 1 0 1 0 0 0 0
................................TTGAGGAAGCACTAGTACCA............................................................................................................................................................................................................................................................................................................................... 20 3 12 0.08 1 0 0 0 0 1 0
.....................................................................................TCAAGTTAATGATAATGC............................................................................................................................................................................................................................................................................ 18 2 14 0.07 1 0 0 0 0 0 1
.............................................................................................................................................................................................................................................................................................ACGTAGAGTGTAAACC...................................................................... 16 1 14 0.07 1 1 0 0 0 0 0
.......................................................................................................................................................ACAAAATTTTGCTAGTAAG......................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0
.....................................................................................TCAAGTTAATGATAA............................................................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 1
..................................GCGGAAAAACTAGTGCCAC.............................................................................................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:3248384-3248754 + dsi_3045 ACATTCAGAAGAAGACATTCACAAAATGGATGAACTCCTTTCTGATCAAGGTGGGTA------------------------------------------AACTACTTGGGTCACT-------TCCAATACTTG-----------------------TAATTCAAT--------TACTATTAAGT---AGAA-----------ATGAAAGAAATGCTTTGTTTTGC--TAAGCCCATAAAGTTTTCATTGTTTTAAAACTATA---------------ATTT---------------------------------------------------------------------------------------------------------------------------------------------------------CTCGATCAAAGTGATGTATT-CAAATGAAAGCGCCATATG---------TATATGACATTCGAAATTATACATTCACTTGAAATTTT-GATTGGAAGAAA---CTTTTATGGCACC----ACCAA----TTT--ATGAATGCAACTCACAT-----TTGGGCTTATCGTCTTC---TTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droSec2 scaffold_2:3343124-3343464 + ACATTCAGAAAAAGACATTCACAAAATGGATGAACTCCTTTCTGATCAAGGTGGGTA------------------------------------------AACTACTTGAGTCACTCATCACTCTGAGTACTTT-----------------------TAATTTAAT--------TACTATTAAGT---ACAA-----------ATGAAAGAAATGCTTTGTT---------------------TTCATTGTTTAAAAACTATA---------------ATTT---------------------------------------------------------------------------------------------------------------------------------------------------------CTCGATCAAAGTGATGTATT-CAAATGAAAGCGCCATATG---------TATATGAC------------------ACTTGAAATTTT-GATTGGAAGAAA---CTTTTATGGCACC----ACCAA----TTT--ATGAATGCAACTCACAT-----TTGGGCTTATCGTCTTC---TTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
dm3 chr3L:3351637-3352014 + ACATCCAGAAGAAGACATTCACAAAATGGATGAACTCGTTTCTGATCAAGGTGTGTA------------------------------------------AACTACTTGAGTCACTCATCACTCCCAATACTTG-----------------------TAATTTAAT--------TACTATAAAGT---ACAA-----------ATGAAAGAAATGCTTTGTTTTGC--TAAGCACATAAAGTTTTCATTGTTTAAATACTATA---------------ATTT---------------------------------------------------------------------------------------------------------------------------------------------------------CTCGATCAAAGTGATGTATT-CAAATGAAAGCGCCATATG---------TATATGACATTCGAAATTATACATTCACTTGAAATTTT-GATTGGAAGAAA---CTTTTATGGCCCC----ACCAA----TTT--ATGAATGCAACTCACAT-----TTGGGCTTATCGTCTTC---TTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droEre2 scaffold_4784:6041636-6042022 + ACATTCAGAAGAAGACGTTCACAAAATGGATGAACTCCTTCCTGATCAAGGTGGGTA------------------------------------------A---------CTCGCTCATCACACCTACTACACCTATTGCACCTATTACCTATTACCTATTCTAAT--------AGCTACCAGCT---ATTA-----------ATGAATGAAACGCTTTGTTTTGC--TAAGAAACTAAAGTTTG--------------TATA---------------ATTT---------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTCAAGAGGAAGTATT-CAAATGAAAGCGACTTATACTCGTTCGTTATGCGACATTTGAAATTATGCATTCACCTGAAATTTT-GATTGGATGAAA---GCTTTATAGCCCC----ACCAA----TTT--ATGAATGCAACTCACAT-----TTGGGCCTATCGTCTTC---TTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droYak3 3L:3898683-3899046 + ACATTCAGAAGAAGACATTCACAAAATGGATGAACTCCTTTCTGATCAAGGTGGGTC------------------------------------------AATTAGCTAGGTCACTCAT----TCTATTACTTA-----------------------TATTTT--------------TATTAACT---ATTA-----------ATGAAAGAAATGCTTTGTTT-GCGATAAGAAACTAAAGATTTTATTGTTT-AAAGTCATA---------------ATTT---------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATCAAACTAAAGTATT-CAAATGAAAGCGACACCT-------------GTGACATTTGAAATTATACATTCACATAAAATTTT-GATTGGAAGAAA---GCTTTATGGCCCC----ACCAA----TTT--ATGAATGCAACTCACAT-----TTGGGCTTATCGTCTTC---TTTGCAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droEug1 scf7180000409466:1079997-1080282 + ACATTCAGAAGAAGACATTCACAAAATGGATGAACTCTTTTCTGATCAAGGTGGGTGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-------------------------------------------------------------AC------TGTTTAAAACTTAATAATAT-------------------------------------------------ATTTGTTAAAACAATCTG----------GGTTATT-GAAATGAAAGCGATAGCT-------------GTGACAGACAAAATTATACATTCACTTGAAATTTTTGATTGGAAGAAA---TTTGTATGGCACC----TCGAA---TAAT--ATGAATGCAACTCACAT-----TTGGGCTTATTGTCTTC---TTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droBia1 scf7180000302428:2719400-2719547 + A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGGTATATTCAC-TGAAATGTA-GATTGGAGTACA---TTTTTATGGCACC----TGTAA----TAT--ATGAATGCAACTCACAG-----TTGGGCTTTTTACCTTC---TTTTCAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droTak1 scf7180000415855:147272-147490 - TTGTTTTTAAAAATATTTTCACCAAATTGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGTTAAAAATGAAAGCGATATTTG------------GTGATTTCAAAAATTAGGTATTCCCTTAAAATTTTGGATTGTAATAAA---TTTTGATGGCAGC----TGCAA----TATAAACGAATGCAACTCACAT-----TTGGGCT-ATTGTCTTTCT-TTTTTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droEle1 scf7180000491249:1889223-1889408 - A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGAAACCGATATCT-------------GTGACACCGAAAATTATGCATTCACTTGATATTTT-GATTGGAAGAAAAGGTTTTTATAGCACCCCCGTCCAT----TAA--ACGAATGCAACTCACTT-----TTGGGCCTATTGTCTTCTTTTTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droRho1 scf7180000777856:9967-10176 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAACCCATA---------------ACTT-------------------------------------------------------------GA-----C-----------------------------------------------T---------------------------------CATCTC----------GAGTATT-TAAACGAAAGCGATATC--------------GTGACACCGAAAATTATACATTCACTTGATATTTT-GATTGGAAGAAA---TTTTAATAGCACCC---TCCAA----TAA--ACGAATGCAACTCACAT-----TTGGGCGTATTGTCTTC---TTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droFic1 scf7180000454105:1680500-1680859 + ACATTCAGAAGAAGACATTCACAAAATGGATGAACTCCTTTCTGATCAAGGTGAGTGCAAAGAAGTTATTGTGACTTTGATT-------------AG----TAAGT-GG--------------------------------------------------------------------------------G-------------------AAG------GTT----------------------------TCTCAAAACTATA---------------ACCT-------------------------------------------------------------AC-----CTGA-------TTAATAATATCCACTATAAACCAGCTATAAACCATTCCCAAGTTATCACAAGTCAAAGCATT----------------------------TGTTGAAAATGAAAGCG----------------------ACACCCAAAATTATACATTCACCTCATATTTT-GATTGGTGGAAA---TTTGTACGGCACC----TCCAATGTCTAT--ATGAATGCAACTCACAT-----TTGGGCTTATTGTCTTC---TCCGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droKik1 scf7180000302391:474017-474491 + ACATCCAGAAGAAGACATTCACAAAATGGATGAACTCCTTTCTCATCAAGGTAAGAAA-----------------------TAATAATATTATACAGTAAATCAGT-GGGT---TTAA----TCTGTTACATTTA------------TATATTACTT--TTTAAAGGTTGTTTTATTATAAAATATCACAAATTTCACATATATTAAAGAAG------GTT---------------------TTCACTATTTAAATAATAAAAGAAACAATGTATCTATTTCCCTAAGACATAAAGAGACTCCTACAATCAATTGCATTATCATAGGCTTTATATTAACCCTACAAAACC-----------------------------------------------C------------------------------------------CAA-ATAGAGTGTT-AAAATGAAAGCTATATCT----------TGCGCGACGACCG-AATTATACATTCACTTTGAATTTT-GATCGAAAGAAA---TTTTTACAGCTTAC---GACAGAGATAAT--ATGAATGCAACTCACATATTATTTGGGCTT------TTT---TTTTTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droAna3 scaffold_13337:10093883-10093972 - A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAATGCATCTCATATTTGTTTT-GGT-----TTTTGG---TTTATAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droBip1 scf7180000396569:1261111-1261195 + AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACC----TCTCA----T-------ACTGCATCTCACAC-----T---------------T---TTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGACGGCATCAA
dp5 XR_group8:5432186-5432257 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGCTAACGCTTTTT---GTTGCAGGCCAAAATGGAGGTGGAGGATCTATTCACAGATCTGGCCGATGGCATAAA
droPer2 scaffold_38:254273-254344 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCTAACGCTTTTT---GTTGCAGGCCAAAATGGAGGTGGAGGATCTATTCACAGATCTGGCCGATGGCATAAA
droWil2 scf2_1100000004768:1052624-1052682 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---TATATAGGCCAAAATGGAGGTCGAAGACCTATTCACAGATCTAGCCGATGGCATCAA
droVir3 scaffold_13049:5236831-5236952 + TATGACATAAAATTATGCACGCTAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGACACTTTCA------------------------------------------------------------------------------------------------------------------------------------------------------CAATTGATAATGCCATTTG---------TATATA-------------------------------------------------------------------------------------------------------------------------CTTCTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGATCTAGCCGATGGCATCAA
droMoj3 scaffold_6680:3603605-3603663 + TCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGATTTAGCCGATGGCATTAA
droGri2 scaffold_15110:13747035-13747090 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGGCCAAAATGGAGGTCGAAGACCTATTCACAGATCTAGCCGATGGCATCAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACATTCAGAAGAAGACATTCACAAAATGGATGAACTCCTTTCTGATCAAGGTGGGTA------------------------------------------AACTACTTGGGTCACT-------TCCAATACTTG-----------------------TAATTCAAT--------TACTATTAAGT---AGAA-----------ATGAAAGAAATGCTTTGTTTTGC--TAAGCCCATAAAGTTTTCATTGTTTTAAAACTATA---------------ATTT---------------------------------------------------------------------------------------------------------------------------------------------------------CTCGATCAAAGTGATGTATT-CAAATGAAAGCGCCATATG---------TATATGACATTCGAAATTATACATTCACTTGAAATTTT-GATTGGAAGAAA---CTTTTATGGCACC----ACCAA----TTT--ATGAATGCAACTCACAT-----TTGGGCTTATCGTCTTC---TTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................GAACTCCTTTCTGATCAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21125.00250121300000000000000
...............................GAACTCCTTTCTGATCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22121.0021061410000000000000
................ATTCACAAAATGGATGAACTCCTTTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2715.00510310000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAAGACCTATTCACAGACCTGGC............2613.00303000000000000000
............................GATGAACTCCTTTCTGATCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200200000000000000
.........................ATGGATGAACTCCTTTCTGATCAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00201010000000000000
............................GATGAACTCCTTTCTGATCAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00202000000000000000
................ATTCACAAAATGGATGAACTCCTTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGAGGTCGAAGACCT...........................2011.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCAAAATGGAGGTCGAAGACCT...........................2511.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGACCTGGCCGATGGC.....2411.00100000000000100000
...............................GAACTCCTTTCTGATCAAGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
................ATTCACAAAATGGATGAACTCCTTTCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
...................................................................................................................................................................................................................................................................ATA---------------ATTT---------------------------------------------------------------------------------------------------------------------------------------------------------CTCGATCAAAGTGAT..........................................................................................................................................................................................................................2211.00101000000000000000
...TTCAGAAGAAGACATTCACAAAATGGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
.................TTCACAAAATGGATGAACTCCTTTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
.........................ATGGATGAACTCCTTTCTGATCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
................................AACTCCTTTCTGATCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGACCTGGCCGATGGC.....1911.00101000000000000000
..................................CTCCTTTCTGATCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
...........................GGATGAACTCCTTTCTGATCAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
...................................TCCTTTCTGATCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.11101000000000000000
droSec2
ACATTCAGAAAAAGACATTCACAAAATGGATGAACTCCTTTCTGATCAAGGTGGGTA------------------------------------------AACTACTTGAGTCACTCATCACTCTGAGTACTTT-----------------------TAATTTAAT--------TACTATTAAGT---ACAA-----------ATGAAAGAAATGCTTTGTT---------------------TTCATTGTTTAAAAACTATA---------------ATTT---------------------------------------------------------------------------------------------------------------------------------------------------------CTCGATCAAAGTGATGTATT-CAAATGAAAGCGCCATATG---------TATATGAC------------------ACTTGAAATTTT-GATTGGAAGAAA---CTTTTATGGCACC----ACCAA----TTT--ATGAATGCAACTCACAT-----TTGGGCTTATCGTCTTC---TTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGACCTGGCCGATGGCATCA.2612.0021010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGACCTGGCCGATGGCAT...2411.0010010
...............................GAACTCCTTTCTGATCAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCACAGACCTGGCCGAT........2011.0010010
...............................GAACTCCTTTCTGATCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.......................AAATGGATGAACTCCTTTCTGATCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
................ATTCACAAAATGGATGAACTCCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCACAGACCTGGCCGATGGCATC..2611.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAAGACCTATTCACAGA..................2011.0011000
............................GATGAACTCCTTTCTGATCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATGGAGGTCGAAGACC............................2011.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGACCTATTCACAGA..................1811.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGACCTGGCCGAT........1911.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATGGAGGTCGAAGAC.............................1911.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGACCTGGCCGATGGCATC..2511.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAATGGAGGTCGAAGAC.............................2111.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTGGCCGATGGCATCA.2011.0010010
dm3
ACATCCAGAAGAAGACATTCACAAAATGGATGAACTCGTTTCTGATCAAGGTGTGTA------------------------------------------AACTACTTGAGTCACTCATCACTCCCAATACTTG-----------------------TAATTTAAT--------TACTATAAAGT---ACAA-----------ATGAAAGAAATGCTTTGTTTTGC--TAAGCACATAAAGTTTTCATTGTTTAAATACTATA---------------ATTT---------------------------------------------------------------------------------------------------------------------------------------------------------CTCGATCAAAGTGATGTATT-CAAATGAAAGCGCCATATG---------TATATGACATTCGAAATTATACATTCACTTGAAATTTT-GATTGGAAGAAA---CTTTTATGGCCCC----ACCAA----TTT--ATGAATGCAACTCACAT-----TTGGGCTTATCGTCTTC---TTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................AAAATGGATGAACTCGTTTCTGATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25119.001900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211104000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................TGGATGAACTCGTTTCTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGACCTGGCCGATGGCATCA.2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGTCGAAGACCTAT.........................1713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGACCTGGCCGATGGCATC..2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCACAAAATGGATGAACTCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGACCTGGCCGATG.......2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AATGGATGAACTCGTTTCTGATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
............................GATGAACTCGTTTCTGATCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGCTTATCGTCTTC---TTTGTAG..................................................2412.0020000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.................TTCACAAAATGGATGAACTCGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCACAGACCTGGCCGATGGCA....2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
...................CACAAAATGGATGAACTCGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................AATGGATGAACTCGTTTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..ATCCAGAAGAAGACATTCACAAAATGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACAAAATGGATGAACTCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAAGACCTATTCACAGACC................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................ACAAAATGGATGAACTCGTTTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTATCGTCTTC---TTTGTAG..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCACAGACCTGGCCGATGGCATC..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ATTCACAAAATGGATGAACTCGTTTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AACTCGTTTCTGATCAAGGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----TTT--ATGAATGCAACTCACAT-----.............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GGATGAACTCGTTTCTGATCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAAGACCTATTCACAGAC.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCTTATCGTCTTC---TTTGT....................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
................ATTCACAAAATGGATGAACTCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAATTTT-GATTGGAAGA.......................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAAAATGGAGGTCGAAGA..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTGGCCGATGGCATCA.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CAGAAGAAGACATTCACAAAATGGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAATGGAGGTCGAA................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAAGAAGACATTCACAAAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGGATGAACTCGTTTCTGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCGCCATATG---------TAT.....................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTATTCACAGACCTGGCCGA.........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGCCATATG---------TATATG..................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAAGACCTATTCACA....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TA---------------ATTT---------------------------------------------------------------------------------------------------------------------------------------------------------CTCGATCAAAGTGATGTA.......................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................ATGAACTCGTTTCTGATCAAGGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCACAGACCTGGCCGATGGCAT...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAT-----TTGGGCTTATCGTCT..............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAATGGAGGTCGAAGACCTATTCA......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CACAAAATGGATGAACTCGTTTCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---TTTGTAGGCCAAAATGGAGG.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAGACCTATTCACAGACCTGGCC...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........AAGACATTCACAAAATGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAAAATGGAGGTCGAA................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ATGGATGAACTCGTTTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGAGGTCGAAGAC.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCTTATCGTCTTC---TTTGTAG..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCTTATCGTCTTC---TTTGTA...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATGGAGGTCGAAGACCT...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AAAATGGATGAACTCGTTTCTGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCACAGACCTGGCCGATG.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTCGAAGACCTATTCACAGACCT...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGGTCGAAGACCTATTCACAGA..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AAATGGATGAACTCGTTTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGAAGACCTATTCACAGA..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGAGGTCGAAGACCTATT........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGGATGAACTCGTTTCTGATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GATGAACTCGTTTCTGATCAAGGTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAATGGAGGTCGAAGA..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCAAAATGGAGGTCGAAG...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACATCCAGAAGAAGACATTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGACCTATTCACAGACCTGGC............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................ACTCGTTTCTGATCAAGGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAAAATGGAGGTCGA.................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACATTCAGAAGAAGACGTTCACAAAATGGATGAACTCCTTCCTGATCAAGGTGGGTA------------------------------------------A---------CTCGCTCATCACACCTACTACACCTATTGCACCTATTACCTATTACCTATTCTAAT--------AGCTACCAGCT---ATTA-----------ATGAATGAAACGCTTTGTTTTGC--TAAGAAACTAAAGTTTG--------------TATA---------------ATTT---------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTCAAGAGGAAGTATT-CAAATGAAAGCGACTTATACTCGTTCGTTATGCGACATTTGAAATTATGCATTCACCTGAAATTTT-GATTGGATGAAA---GCTTTATAGCCCC----ACCAA----TTT--ATGAATGCAACTCACAT-----TTGGGCCTATCGTCTTC---TTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGACCTATTCACAGACCT...............2113.0031000020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGACCTATTCACAGACCTGGC............2413.0030000030
................................AACTCCTTCCTGATCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021100000
.........AGAAGACGTTCACAAAATGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCACAGACCTGGCCGATGGC.....2311.0010001000
....................ACAAAATGGATGAACTCCTTCCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
............AGACGTTCACAAAATGGATGAACTCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
ACATTCAGAAGAAGACGTTCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTATTCACAGACCTGGCCGAT........2511.0010001000
...................CACAAAATGGATGAACTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
...............................GAACTCCTTCCTGATCAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCACAGACCTGGCCGAT........2011.0010001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGACCTGGCCGATGGCAT...2011.0010000010
.........AGAAGACGTTCACAAAATGGATGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
..........GAAGACGTTCACAAAATGGATGAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTATTCACAGACCTGGCCGATGGCAT...2811.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGACCTGGCCGATGGC.....2211.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGGAAGTATT-CAAATGA.............................................................................................................................................................................................................2011.0011000000
................GTTCACAAAATGGATGAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.......................AAATGGATGAACTCCTTCCTGATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
............................GATGAACTCCTTCCTGATCAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000
.............................ATGAACTCCTTCCTGATCAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAAGACCTATTCACAGACCT...............2311.0010100000
..................TCACAAAATGGATGAACTCCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
............AGACGTTCACAAAATGGATGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
............................GATGAACTCCTTCCTGATCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGAAGACCTATTCACAGA..................2111.0011000000
.......GAAGAAGACGTTCACAAAATGGATGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
..................................CTCCTTCCTGATCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310010000
droYak3
ACATTCAGAAGAAGACATTCACAAAATGGATGAACTCCTTTCTGATCAAGGTGGGTC------------------------------------------AATTAGCTAGGTCACTCAT----TCTATTACTTA-----------------------TATTTT--------------TATTAACT---ATTA-----------ATGAAAGAAATGCTTTGTTT-GCGATAAGAAACTAAAGATTTTATTGTTT-AAAGTCATA---------------ATTT---------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATCAAACTAAAGTATT-CAAATGAAAGCGACACCT-------------GTGACATTTGAAATTATACATTCACATAAAATTTT-GATTGGAAGAAA---GCTTTATGGCCCC----ACCAA----TTT--ATGAATGCAACTCACAT-----TTGGGCTTATCGTCTTC---TTTGCAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................GAACTCCTTTCTGATCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2216.00611210010000
................ATTCACAAAATGGATGAACTCCTTTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00302100000000
...............................GAACTCCTTTCTGATCAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00300200100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGAGGTCGAAGACCT...........................1912.00210100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGACCTGGCCGATGGC.....2212.00202000000000
................ATTCACAAAATGGATGAACTCCTTTCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00201100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGAGGTCGAAGAC.............................1812.00200200000000
........................AATGGATGAACTCCTTTCTGATCAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200100010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAAACTAAAGTATT-CAAAT...............................................................................................................................................................................................................2211.00101000000000
................ATTCACAAAATGGATGAACTCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
................ATTCACAAAATGGATGAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...........................GGATGAACTCCTTTCTGATCAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGAAGACCTATTCACAGACCTGGCC...........2811.00100100000000
..................................CTCCTTTCTGATCAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
............AGACATTCACAAAATGGATGAACTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGAAGACCTATTCACAGACC................2311.00101000000000
.......................AAATGGATGAACTCCTTTCTGATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTATTCACAGACCTGGC............2011.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGACCTGGCCGATGGC.....2011.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGACCTGGCCGATGG......2111.00100000010000
.........AGAAGACATTCACAAAATGGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAAGCGACACCT-------------GTGACATTTGA..........................................................................................................................................................................2611.00101000000000
.....CAGAAGAAGACATTCACAAAATGGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
..........GAAGACATTCACAAAATGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAATGGAGGTCGAAGAC.............................2011.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGACCTATTCACAGACCT...............2011.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATGGAGGTCGAAGAC.............................1911.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATGGAGGTCGAAGACC............................2011.00100000010000
......AGAAGAAGACATTCACAAAATGGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
..............................TGAACTCCTTTCTGATCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGAGGTCGAAGACC............................1911.00101000000000
droEug1
ACATTCAGAAGAAGACATTCACAAAATGGATGAACTCTTTTCTGATCAAGGTGGGTGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-------------------------------------------------------------AC------TGTTTAAAACTTAATAATAT-------------------------------------------------ATTTGTTAAAACAATCTG----------GGTTATT-GAAATGAAAGCGATAGCT-------------GTGACAGACAAAATTATACATTCACTTGAAATTTTTGATTGGAAGAAA---TTTGTATGGCACC----TCGAA---TAAT--ATGAATGCAACTCACAT-----TTGGGCTTATTGTCTTC---TTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAASizeHit CountTotal NormTotal
No Reads
droBia1
A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGGTATATTCAC-TGAAATGTA-GATTGGAGTACA---TTTTTATGGCACC----TGTAA----TAT--ATGAATGCAACTCACAG-----TTGGGCTTTTTACCTTC---TTTTCAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAASizeHit CountTotal NormTotal
No Reads
droTak1
TTGTTTTTAAAAATATTTTCACCAAATTGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGTTAAAAATGAAAGCGATATTTG------------GTGATTTCAAAAATTAGGTATTCCCTTAAAATTTTGGATTGTAATAAA---TTTTGATGGCAGC----TGCAA----TATAAACGAATGCAACTCACAT-----TTGGGCT-ATTGTCTTTCT-TTTTTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAASizeHit CountTotal NormTotal
No Reads
droEle1
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGAAACCGATATCT-------------GTGACACCGAAAATTATGCATTCACTTGATATTTT-GATTGGAAGAAAAGGTTTTTATAGCACCCCCGTCCAT----TAA--ACGAATGCAACTCACTT-----TTGGGCCTATTGTCTTCTTTTTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAASizeHit CountTotal NormTotal
No Reads
droRho1
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAACCCATA---------------ACTT-------------------------------------------------------------GA-----C-----------------------------------------------T---------------------------------CATCTC----------GAGTATT-TAAACGAAAGCGATATC--------------GTGACACCGAAAATTATACATTCACTTGATATTTT-GATTGGAAGAAA---TTTTAATAGCACCC---TCCAA----TAA--ACGAATGCAACTCACAT-----TTGGGCGTATTGTCTTC---TTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAASizeHit CountTotal NormTotal
No Reads
droFic1
ACATTCAGAAGAAGACATTCACAAAATGGATGAACTCCTTTCTGATCAAGGTGAGTGCAAAGAAGTTATTGTGACTTTGATT-------------AG----TAAGT-GG--------------------------------------------------------------------------------G-------------------AAG------GTT----------------------------TCTCAAAACTATA---------------ACCT-------------------------------------------------------------AC-----CTGA-------TTAATAATATCCACTATAAACCAGCTATAAACCATTCCCAAGTTATCACAAGTCAAAGCATT----------------------------TGTTGAAAATGAAAGCG----------------------ACACCCAAAATTATACATTCACCTCATATTTT-GATTGGTGGAAA---TTTGTACGGCACC----TCCAATGTCTAT--ATGAATGCAACTCACAT-----TTGGGCTTATTGTCTTC---TCCGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAASizeHit CountTotal NormTotal
No Reads
droKik1
ACATCCAGAAGAAGACATTCACAAAATGGATGAACTCCTTTCTCATCAAGGTAAGAAA-----------------------TAATAATATTATACAGTAAATCAGT-GGGT---TTAA----TCTGTTACATTTA------------TATATTACTT--TTTAAAGGTTGTTTTATTATAAAATATCACAAATTTCACATATATTAAAGAAG------GTT---------------------TTCACTATTTAAATAATAAAAGAAACAATGTATCTATTTCCCTAAGACATAAAGAGACTCCTACAATCAATTGCATTATCATAGGCTTTATATTAACCCTACAAAACC-----------------------------------------------C------------------------------------------CAA-ATAGAGTGTT-AAAATGAAAGCTATATCT----------TGCGCGACGACCG-AATTATACATTCACTTTGAATTTT-GATCGAAAGAAA---TTTTTACAGCTTAC---GACAGAGATAAT--ATGAATGCAACTCACATATTATTTGGGCTT------TTT---TTTTTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAASizeHit CountTotal NormTotal
No Reads
droAna3
A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAATGCATCTCATATTTGTTTT-GGT-----TTTTGG---TTTATAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGACCTGGCCGATGGCATCAA2411.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACAGACCTGGCCGATGGC.....2111.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGACCTATTCACAGACCT...............2011.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACAGACCTGGCCGATGGCATCA.2511.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCACAGACCTGGCCGATGGC.....2311.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGACCTGGCCGATG.......2211.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATGGAGGTCGAAGACC............................2011.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGACCTGGCCGATGGCATCA.2311.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGAGGTCGAAGACCTATT........................2311.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGACCTATTCACAGACC................2011.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGACCTGGCCGATGGC.....2411.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGACCTATTCACAGACCTGGCC...........2511.001010000
droBip1
AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACC----TCTCA----T-------ACTGCATCTCACAC-----T---------------T---TTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGACGGCATCAASizeHit CountTotal NormTotal
No Reads
dp5
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGCTAACGCTTTTT---GTTGCAGGCCAAAATGGAGGTGGAGGATCTATTCACAGATCTGGCCGATGGCATAAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTGGCCGATGGC.....2213.0030200100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAATGGAGGTGGAGG...............................1912.0020200000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTGGCCGAT........1912.0020200000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGAGGATCTATTCACA....................2111.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGAGGTGGAGGATCT...........................1911.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAAAATGGAGGTGGAGGATCT...........................2411.0010000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTGGCCGAT........2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTATTCACAGATCTGGCCGATG.......2511.0010000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTGGCCGATGGCAT...2411.0010000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATGGAGGTGGAGGATCTATTCAC.....................2711.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTGGCCGATG.......2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTGGCCGATGG......2311.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTGGCCGATGGC.....2411.0010000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTATTCACAGATCTGGCC...........2011.0010000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAAAATGGAGGTGGAGG...............................2011.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATGGAGGTGGAGGATCT...........................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATGGAGGTGGAGGAT.............................1911.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGAGGTGGAGGATCT...........................1811.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTGGCCGATG.......2211.0010010000000
droPer2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCTAACGCTTTTT---GTTGCAGGCCAAAATGGAGGTGGAGGATCTATTCACAGATCTGGCCGATGGCATAAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTGGCCGAT........1919.009810000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTGGCC...........1819.009900000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTGGCCG..........1913.003300000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTGGCCGATGGC.....2213.003210000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGATCTGGCCGATG.......1812.002200000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTGGCCGAT........2112.002020000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTGGCCGATG.......2012.002110000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTGGCCGATG.......2211.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCACAGATCTGGCCGAT........2011.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCAAAATGGAGGTGGAGG...............................2111.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATGGAGGTGGAGGAT.............................1911.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGAGGATCTATTCACA....................2011.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGAGGTGGAGGATCT...........................1811.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTATTCACAGATCTGGCCGAT........2211.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAATGGAGGTGGAGGATCT...........................2311.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAATGGAGGTGGAGG...............................1811.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTGGCCGATGGCAT...2411.001001000
droWil2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---TATATAGGCCAAAATGGAGGTCGAAGACCTATTCACAGATCTAGCCGATGGCATCAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTAGCCGATGGCATCAA2718.00801250
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTAGCCGATGGCAT...2417.00700250
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTAGCCGATGGC.....2214.00400040
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTAGCCGATGGCATC..2512.00200200
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGATCTAGCCGATGGCATCAA2412.00200020
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTAGCCGATGGCAT...2612.00200020
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTAGCCGATGGCATCA.2812.00220000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGATCTAGCCGATGGC.....2012.00200020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGACCTATTCACAGAT.................1912.00200020
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGAGGTCGAAGACCT...........................2011.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCAAAATGGAGGTCGAAGACC............................2411.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATCTAGCCGATGGCATC..2011.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTAGCCGATGGC.....2411.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTAGCCGATGGCA....2311.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCACAGATCTAGCCGATGGCATCAA2811.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATGGAGGTCGAAGACC............................2011.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGATCTAGCCGATGGCAT...2211.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCACAGATCTAGCCGAT........2011.00110000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGAGGTCGAAGACCTATTCACA....................2711.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATCTAGCCGATGGCATCAA2311.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTAGCCGAT........1911.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAATGGAGGTCGAAGAC.............................2111.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGACCTATTCACAGATCTAGCCGA.........2711.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAAGACCTATTCACAGATCTAGCCG..........2811.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGATCTAGCCGATGGCATCAA2511.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGATCTAGCCGATGGCA....2111.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGATCTAGCCGATGG......1911.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGAGGTCGAAGACC............................1811.00100010
droVir3
TATGACATAAAATTATGCACGCTAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGACACTTTCA------------------------------------------------------------------------------------------------------------------------------------------------------CAATTGATAATGCCATTTG---------TATATA-------------------------------------------------------------------------------------------------------------------------CTTCTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGATCTAGCCGATGGCATCAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTATTCACAGATCTAGCCGATG.......2512.002002000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTAGCCGATGGCAT...2612.002000000000000000000100000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGAAGACCTATTCACAGAT.................2211.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGATCTAGCCGATGGCATC..2211.001000000000000000000000000000000100000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACAGATCTAGCCGATGGC.....2111.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTAGCCGATGGC.....2211.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCAAAATGGAGGTCGAAGACC............................2411.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTAGCCGATGGC.....2411.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTATTCACAGATCTAGC............2011.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTAGCCGATGGCAT...2411.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGACCTATTCACAGATCTAGCCGAT........2811.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGTCGAAGACCTATTCACAGAT.................2511.001000000000000000000000000000000000000000000000000000000000000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTAGCCGATGGCATCA.2811.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCAAAATGGAGGTCGAAGAC.............................2311.001000000000000000000000010000000000000000000000000000000000000000
droMoj3
TCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGATTTAGCCGATGGCATTAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAATGGAGGTCGAAGACC............................2211.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTATTCACAGATTTAGCCGATGGC.....2511.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAATGGAGGTCGAAGAC.............................2011.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGAAGACCTATTCACAGA..................2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAAGACCTATTCACAGA..................2011.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACAGATTTAGCCGATGGCAT...2411.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCACAGATTTAGCCGATGGC.....2411.001100000
droGri2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGGCCAAAATGGAGGTCGAAGACCTATTCACAGATCTAGCCGATGGCATCAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:02 PM