ID:

dsi_30444

 Coordinate:

3r:26349143-26349203 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.9 -6.9 -6.7 -6.7

Flybase annnotation

five_prime_UTR [3r_26349204_26349651_-]; exon [3r_26349204_26349651_-]; five_prime_UTR [3r_26349085_26349142_-]; exon [3r_26349037_26349142_-]; intron [3r_26349143_26349203_-]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------##################################################
TTTCCGCATGTTACGTAACTTATCTGAGGCGGCGTGGGACTTCATACAATGTATTCTTGGGACAGAAAGTCAGCCCAGAACTAATCGATATCTTCGTCTATATCTTTGCAGAGCCGTGCGCTAGCTTCAATTTTGTCGTAAGCAAAACAAAAAGGAAATTC
**************************************************.....((...............((..(((......(((.....)))......)))..))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 M023
head
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 O001
Testis
..................................................................................................................CGTGCGCTAGCTTCAATTTTGTCGTA..................... 26 0 1 8.00 8 0 1 0 3 2 0 0 0 0 0 2 0 0
.............................................................................................................................TTCAATTTTGTCGTAAGC.................. 18 0 1 5.00 5 4 0 0 0 0 1 0 0 0 0 0 0 0
.................................................TGTATTCTTGGGACAGAAAGTCAGCC...................................................................................... 26 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................GCTTCAATTTTGTCGTAAG................... 19 0 1 2.00 2 0 0 0 0 0 1 0 0 0 1 0 0 0
...................................................................................................................GTGCGCTAGCTTCAATTTTGTC........................ 22 0 2 2.00 4 3 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTTGTCGTAAGCAAAACAAAAAGGAA.... 27 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................GTGCGCTAGCTTCAATTTTGTCGTA..................... 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GCTAGCTTCAATTTTGTCGTAAG................... 23 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0
.............................................................................................................................TTCAATTTTGTCGTAAGCA................. 19 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................CTTCAATTTTGTCGTAAGC.................. 19 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................CGTGCGCTAGCTTCAATTTTGTCGT...................... 25 0 1 2.00 2 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................TTTTGTCGTAAGCAAAA.............. 17 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................AAGCAAAACAAAAAGGA..... 17 0 2 1.50 3 0 0 0 0 3 0 0 0 0 0 0 0 0
..................................................................................................................CGTGCGCTAGCTTCAATTTTGTC........................ 23 0 2 1.00 2 0 1 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................TTTGTCGTAAGCAAAACAAAAAGGAA.... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GCTAGCTTCAATTTTGTCGTAAGCAA................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................AGCCGTGCGCTAGCTTCAATTTTGTC........................ 26 0 2 1.00 2 0 1 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................AATTTTGTCGTAAGCA................. 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TAGCTTCAATTTTGTCGTAAG................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CTTTGCAGAGCCGTGCGCTAG..................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................ATTTTGTCGTAAGCAAAACA............ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TTTGCAGAGCCGTGCGCTAGC.................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1
....................................................................................................................................TTGTCGTAAGCAAAACAAAAAGGAAA... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................AGCTTCAATTTTGTCGTAAG................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........TTGCGTGACTTATCTGAGGCG.................................................................................................................................. 21 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................GTCGTAAGCAAAACAAAAAGGAAATT. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................ATTTTGTCGTAAGCA................. 15 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................TCAATTTTGTCGTAAGCAAA............... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................AAACAAAAAGGAAATTC 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............ACGTAACTTATCTGAGGCG.................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......CATGTTACGTAACTTATCTGA...................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTCTTGGGACGGAAAGTCGGCC...................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...............TAACTTATCTGAGGCGGCGTG............................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................ATACAATGTATTCTTGGGAC.................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................GTCGTAAGCAAAACAAAAAGGA..... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................TTGGGACAGAAAGTCAGCCCAGA.................................................................................. 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................CGTAAGCAAAACAAAAAGG...... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
......CATGTTACGTAACTTATCTGAGGCGGCG............................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TCAATTTTGTCGTAAGCA................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TGCAGAGCCGTGCGCTAGC.................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................GCTTCAATTTTGTCGTAAC................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CTTGGGACAGAAAGTCAGCCCAG................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................CTAGCTTCAATTTTGTCGTAAGC.................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................AATTTTGTCGTAAGCAA................ 17 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................ATGGGACTTCATACAATGTATT.......................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................TTCAATTTTGTCGTAAGCAA................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGTCGTAAGCAAAACAAAAAGGAAAT.. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................ACTAATCGATATCTTCGTC............................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
...............TAACTTATCTGAGGCGGCATGT............................................................................................................................ 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................CGCTAGCTTCAATTTTGTCGTAAGCC................. 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TGCGCTAGCTTCAATTTTGTCGTAAGCA................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................ATACAATGTATTCTTGGGACA................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................CTAATCGATATCTTCGTCTAT............................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..................................................................................................TATATCTTTGCAGAGCCGTGT.......................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................ATCTTCAATTTTGTCGTAAG................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................TATCTTCGTCTACATGTTTGCAG.................................................. 23 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................GCCGTGCGCTAGCTTCAATTTTGTCG....................... 26 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................TTTGCAGAGCCGGGCG......................................... 16 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................CGAGCGCTAGCTTCAATTTTGTC........................ 23 1 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................GTAAGCAAAACAAAAAGG...... 18 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........TTGCGTGGCTTATCTGAGGCG.................................................................................................................................. 21 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................CGTGCGCTAGCTTCAATTTTGT......................... 22 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................AACCGTGCGCTAGCTTCAATTTTGTC........................ 26 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........TGCGTGGCTTATCTGAGGCG.................................................................................................................................. 20 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................CTGGGGCGGCGTGGGGCTTG...................................................................................................................... 20 3 15 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................ATGGATATCTTCGTC............................................................... 15 1 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AAAGGCGTACAATGCATTGAATAGACTCCGCCGCACCCTGAAGTATGTTACATAAGAACCCTGTCTTTCAGTCGGGTCTTGATTAGCTATAGAAGCAGATATAGAAACGTCTCGGCACGCGATCGAAGTTAAAACAGCATTCGTTTTGTTTTTCCTTTAAG
**************************************************.....((...............((..(((......(((.....)))......)))..))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 M024
male body		 M053
female body
 GSM343915
embryo
......................................TGAAGTATGTTACATAAGA........................................................................................................ 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.....................................................................AGTCGGGTCTTGATTAGCTAT....................................................................... 21 0 1 2.00 2 0 0 0 0 2 0 0 0 0
..........................TCCGCCGCACCCTGAAGTATG.................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................CCTGTCTTTCAGTCGGGTCTT................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0
............................................................................................................................................TCGTTTTGTTTTTCCTTTAAG 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0
.............................................................................................................TCTCGGCACGCGATCGAAGTT............................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0
..........................................................CCCTGTCTTTCAGTCGGGTCT.................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................GTCTCGGCACGCGATCGAAGT................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0
......................................................................GTCGGGTCTTGATTAGCTATA...................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
............................................................CTGTCTTTCAGTCGGGTCTTG................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..AGGCGTATAATGCATTGAATA.......................................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0
.............................................................TGTCTTTCAGTCGGGTCTTG................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................................................................................GCTATAGAAGCAGATATAGA........................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................ATAGAAGCAGATATAGA........................................................ 17 0 2 0.50 1 0 1 0 0 0 0 0 0 0
...............................................................................................................TCGGCACGCGATCGAAGTTAA............................. 21 0 2 0.50 1 0 1 0 0 0 0 0 0 0
.......................................................................................TATAGAAGCAGATATAGA........................................................ 18 0 2 0.50 1 0 1 0 0 0 0 0 0 0
........................................................................................ATAGAAGCAGATATAG......................................................... 16 0 2 0.50 1 0 1 0 0 0 0 0 0 0
.........................................................................................TAGAAGCAGATATAGA........................................................ 16 0 3 0.33 1 0 1 0 0 0 0 0 0 0
........ACAATGCATTGATTAGATT...................................................................................................................................... 19 2 3 0.33 1 0 0 0 0 0 0 0 0 1
........................................................AACCCAGTCTGTCAGTCGCGT.................................................................................... 21 3 4 0.25 1 0 0 1 0 0 0 0 0 0
.AAGGCGTCCAAGGCATTGTA............................................................................................................................................ 20 3 6 0.17 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................ATTGTTTTTCCTTTAAG 17 1 6 0.17 1 0 0 0 1 0 0 0 0 0
..........................TCCGGCGCTCCCTGAA....................................................................................................................... 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:26349093-26349253 - dsi_30444 TTTCC-GCA---TGTTACGTAACTT----------A-TCTG-AG-GCGGC-------------------------------------G----TGGGA---CT-----TCATACAATG--TA-TTCTTGGG-ACAGAAAG---T-CA------G-----------CCCAGAACTAA----------T--CGA-T-----------ATCT-TCGTCTATATCT--TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCAAAA-CAAA--AAGGAAATTC
droSec2 scaffold_4:5862713-5862874 - TTTCC-GCA---TGTTACGTAACTT----------T-TCTG-AG-GCGGC-------------------------------------G----TGGGA---CT-----TCATACAATG--TA-TTCTTGGG-ACAGAAAG---T-CA------G-----------CCCAGAACTAA----------T--CGA-T-----------ATCT-TCGTCTATATCTT-TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCAAAA-CAAA--AAGGAAATTC
dm3 chr3R:27044721-27044881 - TTTCC-GCA---TGTTACGTAACTT----------T-TCTG-AG-GCGGC-------------------------------------G----TGGGA---CT-----TGATACAATG--TA-TTCTTGGG-ACAGAAAG---T-CA------G-----------CCCAGAACTAA----------T--CGA-T-----------ATCT-CCGTCTATATCT--TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCAAAA-CAAA--AAGGAAATTC
droEre2 scaffold_4820:936142-936303 + TTTTC-GGT---TGTTACGTAACTT----------C-CCTG-AG-GCGGC-------------------------------------G----TGGAA---CT-----AGATATGATG--TA-CTCTTGAG-ATAGAAAC---T-CA------G-----------CCCAGAACTAA----------C--CGA-T-----------ATCT-TCGTCTATATCTT-TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCAAAA-CAAA--AAGGAAATTC
droYak3 3R:27981046-27981207 - TTTTC-GCT---TGTTACGTAACTT----------T-TCTG-AG-GCGGC-------------------------------------G----TGGAA---CT-----AGATATGATG--TA-CTCTTGCA-ACCGAAAC---T-CA------G-----------CCCAGAACTAA----------C--CGA-T-----------ATCT-TCGTCTATATCTT-TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCAAAA-CAAA--AAGGAAAATC
droEug1 scf7180000407010:15585-15744 - TTTTC-GCT---CGTTACGTAACTG----------T-GCTT-AG-GCGGC----------------------------------GGCG----TGGGA---TT-----TTTTATGATA--TA-GTCTTGAG-----A------T-CA------G-----------CCT-GAACTAA----------C--CGA-T-----------ATATCTCGTCTATATCTT-TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTCGT-CGTAA-ATCAAA-CAAAAAAAGGAAAATC
droBia1 scf7180000302113:268229-268385 + TTTTC-GCT---CGTTACGTAACT-------------GCTG-AG-GCGGC-------------------------------------GTG--TGGGA--------------AAGATG------ACTTGAGAAAAGA-GGCCTT-CC---GCAG-------------CGAAACTAA----------C--CGA-T-----------ATA--CCGTCTATGTCT--TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCCAAA-CAAAAAAAGGAAAATC
droTak1 scf7180000415286:165064-165218 - TTTTC-GCC---TGTTACGTAACCT----------TTTCTG-AG-GCGGC-------------------------------------GT-GT-GGGA---AA-----TGATATGATA--TG-ATCTA---------------T-GA------T-----------CCCAAAACTAA----------TC-CGA-T-----------AT---CCGTCTATATCTT-TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCCAAA-CAAAAAAAGGAAAATC
droEle1 scf7180000491194:1052849-1053005 - TTTCC-G-----TGTTACGTAACTT----------TTTCTG-AG-GCGGC-------------------------------------GTG--TGGGA------------------TG--TAGTTCTTCAA-----A---TCTT-CA------A--------CCTCCCAAAACTAA----------T--CGA-T-----------ATATTCCGTCTATATCTT-TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCCAAAACAAAAAAAGGAAAATC
droRho1 scf7180000777206:283515-283664 + TTT-C-GCT---CGTTACGTAACTT----------TTTCTG-AG-GCGGC-------------------------------------A----TGGGA---TT------------ATG-----TTCTTC-----AGA---TCTT-CA------G-----------CCC-CAACTAA----------C--CGA-T-----------ATATTCCGTCTATATCT--TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCAAAA-CAAAAAAAAGAAAATC
droFic1 scf7180000453782:260972-261120 + TTTCC-GCT---CGTTACGTAACTT----------G-TCTG-AG-GCGGC-------------------------------------G----TGGGA----------------------TA-CTCTTC-----AGT---TCTT-CA------G-----------CCCCAAACTAA----------C--CGA-C-----------ATATCCCGTCTATATCTT-TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTCGT-CGTAA-GCCAAT-TAAAAAAAGGAAAATC
droKik1 scf7180000301923:160036-160186 - TTTTC-GCACGGTGTTACGTAACTT----------T-TCTG-AG-GCGGC---------------------------G-CAGGCGGCGT-TT-GG----------------------------------------A---TCTT-T-------G-----------C-CACCACTAACGATAA----T--C-A-T-----------ATCT-CCGTCTATATCTT-TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCCAAC-AAAA--AAAGAAAATC
droAna3 scaffold_13340:14436033-14436199 - TTTTC-GCA---CATTACGTAACAA----------CTTCTG-AG-GCGGC---------------------------T----GCGGCGT-TT---G------ACATTT-----GA-------CAGCTGAG-----A--A---TCCAACTATTG-----------CCC-GATCTAA----------CC-CGA-T-----------ATAT-TCGTCTATATCT--TTGCAGAGCTCCGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCAAAATCTAAAAAAAAAAAATC
droBip1 scf7180000395971:734182-734343 + TTTTT-GCA---CATTACGTAACT-------------TCTG-AG-GCGGC---------------------------T----GCGGCGT-TT---G------ACATTT-----GA-------CAGCTGAG-----AACC---C-CAACTATTG-----------CTC-GATCTAA----------C--CGA-C-----------ATA--ACGTCTATATCTT-TTGCAGAGCTCCGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCAAAATCTAA--AAAAAAAATC
dp5 2:85556-85740 + TTTCC-ACC---CATTACGTAACAT----------T-TTGC-AG-GCGGTAGCGGCAGCAGCAGCAGCGACAGCGACA----GCGGCGT-TT---A------CCAAAT---GCA---AA------------------------------CT----TATTTATCGCATAGAACCTA----------T--AGTTT-----------ATTT-CCATCTATATCTT-TTGCAGAGCTCCGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCCAAT-CAAA--AAAAAAAATC
droPer2 scaffold_7:2877264-2877443 + TTTTCCACC---CATTACGTAACAT----------T-TTGC-AG-GCGGTAGCGGCAGCAGCAGCAGCG------ACA----GCGGCGT-TT---A------CCAAAT---GCA---AA------------------------------CT----TATTTATCGCATAGAACCTA----------T--AGTTT-----------ATTT-CCATCTATATCTT-TTGCAGAGCTCCGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCCAAT-CAAA--AAAAAAAATC
droWil2 scf2_1100000004921:711727-711891 - TTTCC-CTG---CATTACGTAACTAAC--------A-TCGCAAG-GCGGC---------------------------AGCA-GC---G----GCGGATTA--ACA--------------TT-TTCGCAAA-ACAG----TTT-------ACAG-----------TT--AGATTAA----------TCTCAA-T-----------A------ATTTATATCTTTTTGCAGAGCTCCGTGCGCTAGCTTCAAGTTTTGT-CGTAA-GCCAAT-CCAAAAAAAAGAAATC
droVir3 scaffold_12855:1227646-1227719 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-C-----------ATCT-ACATCTATATCTT-TTGCAGAGCTCCGTGCGCTTGCTTCAA-TTTTGTGCGAAACGCCAAT-T--------ACAATTC
droMoj3 scaffold_6540:26975044-26975232 + TTTTT-TCC---CATTACGTAACCAACAGCA---AC-TTGC-AGGCGGGC---------------------------A----GCGGCGT-TT---GCGGC--ACC--------------GA-TTC-----------------G-CAACAATTATATATTTA-CACATATATATAAATAAAAATAT-----A-TATTTACAAAAAATCT-ACATCTATATCTT-TTGCAGAGCTCCGTGCGCTTGCTTCAA-TTTTGTGCGAAACGCCAAT-T--------AAAATTC
droGri2 scaffold_14624:3814819-3814998 + TTTTT-TTCCATTGTTACGTAACCAGCAGCAGATAA-TTGC-AG-GCGGC-------------------------------------A----TTCAA---CT------CAAACACAG--TT-TTTATGGT-TTAAA----------------------------------TATAAATATAAACAT-----A-TATTTACAAGAAAT---T--TATATATCTTTTTGCAGAGCTACGTGCGCTTGCTTCAAGTTTTGTGCGAAACGCCAAT-TATT---AAAAAAATC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTTCC-GCA---TGTTACGTAACTT----------A-TCTG-AG-GCGGC-------------------------------------G----TGGGA---CT-----TCATACAATG--TA-TTCTTGGG-ACAGAAAG---T-CA------G-----------CCCAGAACTAA----------T--CGA-T-----------ATCT-TCGTCTATATCT--TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCAAAA-CAAA--AAGGAAATTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TTTTGT-CGTA.........................2618.00800010023200000000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GC.....................1815.00501400000000000000
...................................................................................................................TG--TA-TTCTTGGG-ACAGAAAG---T-CA------G-----------CC.........................................................................................................................2614.00400400000000000000
...................................................................................................................................................................................................................................................GCTTCAA-TTTTGT-CGTAA-G......................1912.00201000100000000000
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-C............................2222.00400310000000000000
...........................................................................................................................................................................................................................................................TTTTGT-CGTAA-GCAAAA-CAAA--AAGGAA....2712.00200010010000000000
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-CGTA.........................2512.00200020000000000000
...............................................................................................................................................................................................................................................GCTAGCTTCAA-TTTTGT-CGTAA-G......................2312.00202000000000000000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GCA....................1912.00201100000000000000
....................................................................................................................................................................................................................................................CTTCAA-TTTTGT-CGTAA-GC.....................1912.00200100001000000000
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TTTTGT-CGT..........................2512.00200100000010000000
...........................................................................................................................................................................................................................................................TTTTGT-CGTAA-GCAAAA-................1712.00200000000002000000
.....................................................................................................................................................................................................................................................................AA-GCAAAA-CAAA--AAGGA.....1721.50300000030000000000
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TTTTGT-C............................2321.00200010000000100000
............................................................................................................................................................................................................................................................TTTGT-CGTAA-GCAAAA-CAAA--AAGGAA....2611.00100010000000000000
...............................................................................................................................................................................................................................................GCTAGCTTCAA-TTTTGT-CGTAA-GCAA...................2611.00100010000000000000
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCAA-TTTTGT-C............................2621.00200010000000100000
........................................................................................................................................................................................................................................................AA-TTTTGT-CGTAA-GCA....................1611.00100000000001000000
.................................................................................................................................................................................................................................................TAGCTTCAA-TTTTGT-CGTAA-G......................2111.00100000000001000000
...........................................................................................................................................................................................................................CT--TTGCAGAGC--CGTGCGCTAG...........................................2111.00100000000001000000
.........................................................................................................................................................................................................................................................A-TTTTGT-CGTAA-GCAAAA-CA..............2011.00100100000000000000
............................................................................................................................................................................................................................T--TTGCAGAGC--CGTGCGCTAGC..........................................2111.00100001000000000000
.............................................................................................................................................................................................................................................................TTGT-CGTAA-GCAAAA-CAAA--AAGGAAA...2611.00100000000010000000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-G......................2011.00100000001000000000
...............................................................................................................................................................................................................................................................GT-CGTAA-GCAAAA-CAAA--AAGGAAATT.2611.00100100000000000000
.........................................................................................................................................................................................................................................................A-TTTTGT-CGTAA-GCA....................1511.00100000010000000000
......................................................................................................................................................................................................................................................TCAA-TTTTGT-CGTAA-GCAAA..................2011.00100000000000100000
...........................................................................................................................................................................................................................................................................AAA-CAAA--AAGGAAATTC1711.00100000000001000000
................ACGTAACTT----------A-TCTG-AG-GCG...............................................................................................................................................................................................................................................1911.00110000000000000000
.......CA---TGTTACGTAACTT----------A-TCTG-A....................................................................................................................................................................................................................................................2111.00100010000000000000
...................TAACTT----------A-TCTG-AG-GCGGC-------------------------------------G----TG.................................................................................................................................................................................................2111.00110000000000000000
.............................................................................................................ATACAATG--TA-TTCTTGGG-AC..........................................................................................................................................................2011.00100100000000000000
...............................................................................................................................................................................................................................................................GT-CGTAA-GCAAAA-CAAA--AAGGA.....2211.00100010000000000000
.............................................................................................................................TTGGG-ACAGAAAG---T-CA------G-----------CCCAGA.....................................................................................................................2311.00101000000000000000
..................................................................................................................................................................................................................................................................CGTAA-GCAAAA-CAAA--AAGG......1911.00100000000000100000
.......CA---TGTTACGTAACTT----------A-TCTG-AG-GCGGC-------------------------------------G----...................................................................................................................................................................................................2811.00100100000000000000
......................................................................................................................................................................................................................................................TCAA-TTTTGT-CGTAA-GCA....................1811.00100010000000000000
................................................................................................................................................................................................................................TGCAGAGC--CGTGCGCTAGC..........................................1911.00100000100000000000
...................................................................................................................................................................................................................................................GCTTCAA-TTTTGT-CGTAA-C......................1911.00100100000000000000
............................................................................................................................CTTGGG-ACAGAAAG---T-CA------G-----------CCCAG......................................................................................................................2311.00100000000001000000
................................................................................................................................................................................................................................................CTAGCTTCAA-TTTTGT-CGTAA-GC.....................2311.00100100000000000000
........................................................................................................................................................................................................................................................AA-TTTTGT-CGTAA-GCAA...................1711.00100000010000000000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GCAA...................2011.00100100000000000000
..............................................................................................................................................................................................................................................................TGT-CGTAA-GCAAAA-CAAA--AAGGAAAT..2611.00100010000000000000
..........................................................................................................................................................................ACTAA----------T--CGA-T-----------ATCT-TCGTC.........................................................................1911.00100000100000000000
..............................................................................................................................................................................................................................................CGCTAGCTTCAA-TTTTGT-CGTAA-GCC....................2611.00100010000000000000
............................................................................................................................................................................................................................................TGCGCTAGCTTCAA-TTTTGT-CGTAA-GCA....................2811.00100010000000000000
.............................................................................................................ATACAATG--TA-TTCTTGGG-ACA.........................................................................................................................................................2111.00100000001000000000
...........................................................................................................................................................................CTAA----------T--CGA-T-----------ATCT-TCGTCTAT......................................................................2111.00100000000100000000
......................................................................................................................................................................................................................TATATCT--TTGCAGAGC--CGTGT................................................2111.00100000000010000000
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-TTTTGT-CG...........................2620.50100000000000100000
...................................................................................................................................................................................................................................................................GTAA-GCAAAA-CAAA--AAGG......1820.50100010000000000000
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TTTTGT-.............................2220.50100010000000000000
droSec2
TTTCC-GCA---TGTTACGTAACTT----------T-TCTG-AG-GCGGC-------------------------------------G----TGGGA---CT-----TCATACAATG--TA-TTCTTGGG-ACAGAAAG---T-CA------G-----------CCCAGAACTAA----------T--CGA-T-----------ATCT-TCGTCTATATCTT-TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCAAAA-CAAA--AAGGAAATTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................GTAA-GCAAAA-CAAA--AAGGA.....19120.002000200
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TTTTGT-C............................23215.003012252
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-TTTTGT-C............................25212.502510240
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-C............................2229.001810170
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TTTTGT-CGTA.........................2616.0060060
.......................................................................................................................................................................................................................................C--CGTGCGCTAGCTTCAA-TTTTGT-C............................2424.5090090
...............................................................................................................................................................................................................................................GCTAGCTTCAA-TTTTGT-C............................1824.0080080
...................................................................................................................................................................................................................................................................GTAA-GCAAAA-CAAA--AAGGAA....2014.0040040
...................................................................................................................................................................................................................................................................GTAA-GCAAAA-CAAA--AAGGAAATTC2414.0040040
...................................................................................................................................................................................................................................................................GTAA-GCAAAA-CAAA--AAGG......1823.5070070
.............................................................................................................................................................................................................................................GCGCTAGCTTCAA-TTTTGT-C............................2022.5050041
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCAA-TTTTGT-C............................2622.5050050
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-TTTTGT-CGT..........................2712.0020200
.................................................................................................................................................................................................................................................TAGCTTCAA-TTTTGT-CGTAA-G......................2112.0020020
....................................................................................................................................................................................................................................................CTTCAA-TTTTGT-CGTAA-GCA....................2012.0020020
..................................................................................................................................................................................................................................................................CGTAA-GCAAAA-CAAA--AAG.......1812.0020020
............................................................................................................................................................................................................................................................TTTGT-CGTAA-GCAAAA-CAAA--AAGGA.....2512.0020110
....................................................................................................................................................................................................................................................CTTCAA-TTTTGT-CGTAA-GC.....................1912.0020020
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GC.....................1812.0020020
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCAA-T...................................2021.5030030
..............................................................................................................................................................................................................................................CGCTAGCTTCAA-TTTTGT-C............................1921.5030030
...............................................................................................................................................................................................................................................................GT-CGTAA-GCAAAA-CAAA--AAGGAAA...2411.0011000
............................................................................................................................................................................................................ATCT-TCGTCTATATCTT-TTGCA...........................................................2211.0010010
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TTTTGT-.............................2221.0020020
........................................................................................................................A-TTCTTGGG-ACAGAAAG---T-CA------G-----------CCC........................................................................................................................2411.0011000
..................GTAACTT----------T-TCTG-AG-GCGGC-------------------------------------........................................................................................................................................................................................................1911.0010010
.......................................................................................................................................................................................................................................C--CGTGCGCTAGCTTCAA-TTTTGT-.............................2321.0020020
..............................................................................................................................................................................................................................................................TGT-CGTAA-GCAAAA-CAAA--AA........2011.0010010
...................................................................................................................................................................................................................................................GCTTCAA-TTTTGT-CGTAA-GCA....................2111.0011000
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-TTTTGT-CGTA.........................2811.0011000
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-T...................................1921.0022000
......................................................................................................................................................................................................................................................TCAA-TTTTGT-CGTAA-GCAAAA-CAAA--A.........2611.0010001
.........................................................................................................................................................................................................................................................A-TTTTGT-CGTAA-GCAAAA-CAAA--AAGGA.....2711.0010100
.............................................................................................................................................................................................................................................................TTGT-CGTAA-GCAAAA-CAAA--GGA.......2211.0010010
.........................................................................................................................................................................................................................................................A-TTTTGT-CGTAA-GCAAAA-................1811.0010010
..................................................................................................................................................................................................................................................................CGTAA-GCAAAA-CAAA--AAGGA.....2011.0010010
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GCAAAA-................2211.0010010
...........................................................................................................................................................................................................................................................TTTTGT-CGTAA-GCAAAA-CAAA--AAGGAA....2711.0010010
..............................................................................................................................................................................................................................................................TGT-CGTAA-GCAAAA-CAAA--..........1811.0010010
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-CGTA.........................2511.0011000
..............................................................................................................................................................................................................................................................TGT-CGTAA-GCAAAA-CAAA--AAGGAAA...2511.0010010
.................................................................................................................................................................................................................................................TAGCTTCAA-TTTTGT-CGTAA-GC.....................2211.0010100
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCAA-TTTTGT-CG...........................2721.0020110
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-CGT..........................2411.0010001
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCAA-TTTTGT-CGT..........................2811.0010010
................................................................................................................................................................................................................................................CTAGCTTCAA-TTTTGT-CGTAA-G......................2211.0010010
...................................................................................................................................................................................................................................................GCTTCAA-TTTTGT-CGTAA-GC.....................2011.0010001
.......................................................................................................................................................................................................................................................CAA-TTTTGT-CGTAA-GCAA...................1811.0010010
............................................................................................................................................................................................................................................TGCGCTAGCTTCAA-TTTTGT-CGTAA-GC.....................2711.0010010
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTA.........................2911.0011000
......................................................................................................................................................................................................................................................................A-GCAAAA-CAAA--AAGGAAA...1811.0010010
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GCA....................1911.0010010
.....................................................................................................................................................................................................................................................................AA-GCAAAA-CAAA--AAGGAAATT.2111.0010010
.............................................................................................................................................................................................................................................GCGCTAGCTTCAA-TTTTGT-CGTA.........................2311.0010010
................................................................................................................................................................................................T-----------ATCT-TCGTCTATATCTT-TT..............................................................2011.0010001
.........................................................................................................................................................................................................................................................A-TTTTGT-CGTAA-GCAAAA-CAAA--AAG.......2511.0010010
.....................................................................................................................................................................................................................................................................AA-GCAAAA-CAAA--AAGGAAA...1911.0010010
.............................................................................................................................................................................................................................................GCGCTAGCTTCAA-TTTTGT-CGTAA-GC.....................2611.0010010
.......................................................................................................................................................................................................................................................CAA-TTTTGT-CGTAA-GCAAA..................1911.0010010
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-GC.....................2111.0011000
...................................................................................................................................................................................................................................................................GTAA-GCAAAA-CAAA--AAGGAAATT.2311.0010010
.......................................................................................................................................................................................................................................C--CGTGCGCTAGCTTCAA-T...................................1820.5010010
.............................................................................................................................................................................................................................................GCGCTAGCTTCAA-TTTTGT-.............................1920.5010010
.......................................................................................................................................................................................................................................C--CGTGCGCTAGCTTCAA-TTTTGT-CG...........................2520.5010010
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCAA-TTTTGT-.............................2520.5010010
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TT..................................1820.5010010
dm3
TTTCC-GCA---TGTTACGTAACTT----------T-TCTG-AG-GCGGC-------------------------------------G----TGGGA---CT-----TGATACAATG--TA-TTCTTGGG-ACAGAAAG---T-CA------G-----------CCCAGAACTAA----------T--CGA-T-----------ATCT-CCGTCTATATCT--TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCAAAA-CAAA--AAGGAAATTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-T...................................191100.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000011548201004000000401001900000000000000000000000000000000000000000000000000010000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCA......................................18195.0095000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010144521003800202150000300000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-GCA....................22181.0081000001000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000725000042001000400005000000100000000000000000000000000100000000000000000102000231000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................AA-GCAAAA-CAAA--AAGGAAATTC22164.0064000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000824000103000000600001200000000000000000000100000000000000000000000000000000000030000000000000000000100000000000000000000000000000000000000000000000000001000000000000000000000000000010000000000020000000100000000000000000000000000000000
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-....................................18152.005200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052800120300000410200500000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-TTTTGT-CGT..........................27133.00330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001900000200000010100400000000000000000000000000000000000000000000000000010100060000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000001400000000000000000000000000000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-GC.....................21131.003100000000001000000000000000000000000000000000000000000000000000000000000000000000001000000100000021322000100000020000000000000000000000000000000000000000000000000000000000000051000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-TTT.................................21130.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000066000002000002200001000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TTTGT-CGTAA-GCAAAA-CA..............18125.002500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031300000200000010000500000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-GCAAA..................24122.002200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000006000001000000000000000000000000000000002000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-TTTT................................22118.001800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041110000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-TT..................................20118.001800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011200100100000000000100000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCAA-T...................................20116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003900110000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................A-TTTTGT-CGTAA-GCAAAA-CA..............20114.001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TCAA-TTTTGT-CGTAA-GCA....................18114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000010100400000000000000000000000000000000000000000000000000000100040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................GCTAGCTTCAA-TTTTGT-CGT..........................20113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000020000000000000000000000000000000000000000000000000000000010000030000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCAA-....................................19112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001320102100000010000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TAGCTTCAA-TTTTGT-CGTAA-GCA....................23112.00120000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001500000000000000000300000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-TTTTGT-.............................24112.00120000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000330100200100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-TTTTGT-C............................25112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104201000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-GCAAAA-CA..............27112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000300000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-GCAAAA-C...............26112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000100030000000000000000020400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTA.........................18111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001500000000000000000200000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCAA-TTTTGT-C............................26111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................GCGCTAGCTTCAA-TTTTGT-C............................2019.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-.......................1919.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002500000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCAA-TTTTGT-.............................2519.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000330000100000000010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GCA....................1919.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000200000011000000000000000000000000000000000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-GCAA...................2319.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000200000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCAA-TT..................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000003300000000000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GCTTCAA-TTTTGT-CGTAA-GCA....................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000100000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TTTTGT-CGTAA-GCAAAA-CA..............1919.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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TTTTC-GGT---TGTTACGTAACTT----------C-CCTG-AG-GCGGC-------------------------------------G----TGGAA---CT-----AGATATGATG--TA-CTCTTGAG-ATAGAAAC---T-CA------G-----------CCCAGAACTAA----------C--CGA-T-----------ATCT-TCGTCTATATCTT-TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCAAAA-CAAA--AAGGAAATTCSizeHit CountTotal NormTotalM055
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Head		V040
Embryo		V107
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......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-TTTTGT-C............................25119.00194703140
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-TTTTGT-CGT..........................27114.001412000200
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TTTTGT-C............................23113.00131002820
...................................................................................................................................................................................................................................................................GTAA-GCAAAA-CAAA--AAGGA.....1919.0092004210
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-C............................2218.0082102120
.............................................................................................................................................................................................................................................GCGCTAGCTTCAA-TTTTGT-C............................2016.0061003020
...................................................................................................................................................................................................................................................................GTAA-GCAAAA-CAAA--AAGGAA....2015.0052000210
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-TTTTGT-.............................2414.0041201000
.....................................................................................................................................................................................................................................................................AA-GCAAAA-CAAA--AAGGAAATTC2214.0040000310
..................................................................................................................................................................................................................................................................CGTAA-GCAAAA-CAAA--AAGGA.....2014.0041000300
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-T...................................1913.0031002000
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TTTTGT-.............................2213.0030010110
...............................................................................................................................................................................................................................................GCTAGCTTCAA-TTTTGT-C............................1813.0030001020
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCAA-TTTTGT-C............................2613.0030101010
...................................................................................................................................................................................................................................................................GTAA-GCAAAA-CAAA--AAGG......1812.0020101000
...................................................................................................................................................................................................................................................................GTAA-GCAAAA-CAAA--AAGGAAATT.2312.0020200000
............................................................................................................................................................................................................................................TGCGCTAGCTTCAA-TTTTGT-C............................2112.0020002000
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-.............................2112.0021000010
..............................................................................................................................................................................................................................................CGCTAGCTTCAA-TTTTGT-C............................1912.0021100000
............................................................................................................................................................................................................................................TGCGCTAGCTTCAA-TTTTGT-CGT..........................2312.0022000000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GC.....................1812.0020000020
..............................................................................................................................................................................................................................................................TGT-CGTAA-GCAAAA-CAAA--AAGGA.....2312.0020110000
...............................................................................................................................................................................................................................................GCTAGCTTCAA-TTTTGT-CGTAA-GC.....................2412.0020100010
..................................................................................................................................................................................................................................................................CGTAA-GCAAAA-CAAA--AAGG......1912.0022000000
.........................................................................................................................................................................................................................................................A-TTTTGT-CGTAA-GCAAAA-C...............1912.0020000110
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCAA-TTT.................................2211.0011000000
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-.......................2711.0010000010
....................................................................................................................................................................................................................................................CTTCAA-TTTTGT-CGTAA-GC.....................1911.0010001000
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCAA-T...................................2011.0010000010
............................................................................................................GATATGATG--TA-CTCTTGAG-ATAG........................................................................................................................................................2311.0010000010
......................................................................................................................................................................................................................................................................A-GCAAAA-CAAA--AAGGAAATTC2111.0011000000
...................................................................................................................................................................................................................................................................GTAA-GCAAAA-CAAA--AAGGAAAT..2211.0011000000
............TGTTACGTAACTT----------C-CCTG-AG-..................................................................................................................................................................................................................................................2011.0010000010
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCAA-TTTT................................2311.0010000010
....................................................................................................................................................................................................................................................................TAA-GCAAAA-CAAA--AAGGAA....1911.0010000100
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-CGTA.........................2511.0010100000
..............................................................................................................................................................................................................................................CGCTAGCTTCAA-TTTTGT-CGTAA-GC.....................2511.0010010000
...........................................................................................................................................................................................................................................................TTTTGT-CGTAA-GCAAAA-CA..............1911.0011000000
...................................................................................................................................................................................................................................................................GTAA-GCAAAA-CAAA--AAGGAAATTC2411.0010100000
.......................................................................................................................................................................................................................................C--CGTGCGCTAGCTTCAA-TTTTGT-CGTA.........................2711.0011000000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GCAAA..................2111.0010001000
.......................................................................................................................................................................................................................................C--CGTGCGCTAGCTTCAA-TTTTGT-C............................2411.0010001000
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCAA-TTTGC...............................2411.0010100000
...........................................................................................................................................................................................................................................................TTTTGT-CGTAA-GCAAAA-CAAA--AAGG......2511.0011000000
..................................................................................................................ATG--TA-CTCTTGAG-ATAGAAAC---T-CA------G-----------CCCA.......................................................................................................................2911.0011000000
........................................................................................................................................................................................................................................................AA-TTTTGT-CGTAA-GCAAAA-CAAA--AAGGA.....2811.0010000100
.............................................................................................................................................................................................................................................GCGCTAGCTTCAA-TTTTGT-CGTAA-GC.....................2611.0010001000
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-TT..................................2011.0010000010
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-CGT..........................2411.0011000000
....................................................................................................................G--TA-CTCTTGAG-ATAGAAAC---T-CA------G-----------CCC........................................................................................................................2611.0011000000
...............................................................................................................................................................................................................................................GCTAGCTTCAA-TTTTGT-CGT..........................2011.0011000000
......................................................................................................................................................................................................................................................TCAA-TTTTGT-CGTAA-GCA....................1811.0010001000
...............................................................................................................................................................................................................................................................GT-CGTAA-GCAAAA-CAAA--AAGG......2111.0010000010
............................................................................................................................................................................................................................................................TTTGT-CGTAA-GCAAAA-CAAA--AAGGAAA...2711.0010000100
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-TTT.................................2111.0011000000
.....................................................................................................................................................................................................................................................................AA-GCAAAA-CAAA--AAGGAAA...1920.5010000100
droYak3
TTTTC-GCT---TGTTACGTAACTT----------T-TCTG-AG-GCGGC-------------------------------------G----TGGAA---CT-----AGATATGATG--TA-CTCTTGCA-ACCGAAAC---T-CA------G-----------CCCAGAACTAA----------C--CGA-T-----------ATCT-TCGTCTATATCTT-TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCAAAA-CAAA--AAGGAAAATCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-TTTTGT-C............................25132.00320118000200011
...................................................................................................................................................................................................................................................................GTAA-GCAAAA-CAAA--AAGGAAAATC24110.001002710000000
.....................................................................................................................................................................................................................................................................AA-GCAAAA-CAAA--AAGGAAAATC2216.00600201030000
........................................................................................................................................................................................................................................................................GCAAAA-CAAA--AAGGAAAATC2015.00501200020000
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-C............................2214.00402020000000
..................................................................................................................................................................................................................................................................CGTAA-GCAAAA-CAAA--AAGGAAAATC2514.00401200010000
......................................................................................................................................................................................................................................GC--CGTGCGCTAGCTTCAA-TTTTGT-CGT..........................2714.00400002020000
...................................................................................................................................................................................................................................................................GTAA-GCAAAA-CAAA--AAGGA.....1914.00402110000000
.....................................................................................................................................................................................................................................AGC--CGTGCGCTAGCTTCAA-TTTTGT-C............................2614.00403100000000
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TTTTGT-C............................2313.00302000010000
....................................................................................................................................................................................................................................................CTTCAA-TTTTGT-CGTAA-GC.....................1913.00302100000000
...................................................................................................................................................................................................................................................GCTTCAA-TTTTGT-CGTAA-G......................1913.00320100000000
.............................................................................................................................................................................................................................................GCGCTAGCTTCAA-TTTTGT-C............................2013.00301010010000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GC.....................1813.00320100000000
......................................................................................................................................................................................................................................................................A-GCAAAA-CAAA--AAGGAAAATC2112.00200200000000
...............................................................................................................................................................................................................................................................GT-CGTAA-GCAAAA-CAAA--AAGGAAAATC2712.00201100000000
...............................................................................................................................................................................................................................................GCTAGCTTCAA-TTTTGT-CGTA.........................2112.00201000010000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GCAAA..................2112.00201000010000
....................................................................................................................................................................................................................................................................TAA-GCAAAA-CAAA--AAGGAAAATC2312.00201100000000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GCA....................1912.00210001000000
...............................................................................................................................................................................................................................................GCTAGCTTCAA-TTTTGT-CGT..........................2012.00201000010000
.......................................................................................................................................................................................................................................C--CGTGCGCTAGCTTCAA-TTTTGT-C............................2412.00200100010000
...........................................................................................................................................................................................................................................................TTTTGT-CGTAA-GCAAAA-CAAA--AA........2311.00100000010000
...............................................................................................................................................................................................................................................GCTAGCTTCAA-TTTTGT-CGTAA-GC.....................2411.00100010000000
...................................................................................................................................................................................................................................................................GTAA-GCAAAA-CAAA--AAGGAA....2011.00100000010000
...............................................................................................................................................................................................................................................GCTAGCTTCAA-TTTTGT-C............................1811.00100010000000
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-CGTAA-GC.....................2811.00100100000000
..................................................................................................................................................................................................................................................................CGTAA-GCAAAA-CAAA--AAGG......1911.00100100000000
.......................................................................................................................................................................................................................................C--CGTGCGCTAGCTTCAA-TTTT................................2111.00101000000000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-GC.....................2111.00100100000000
............................................................................................................................................................................................................................................TGCGCTAGCTTCAA-TTTTGT-CGTAA-GCA....................2811.00101000000000
.............................................................................................................................................................................................................................................................TTGT-CGTAA-GCAAAA-CAAA--AAGG......2311.00100100000000
............................................................................................................................................................................................................................................TGCGCTAGCTTCAA-TTTTGT-C............................2111.00100010000000
...............................................................................................................................................................................................................................................GCTAGCTTCAA-TTTTGT-CGTAA-G......................2311.00100000100000
..............................................................................................................................................................................................................................................................TGT-CGTAA-GCAAAA-CAAA--AAGGA.....2311.00100100000000
..................................................................................................................................................................................................................................................................CGTAA-GCAAAA-CAAA--AAGGAAAAT.2411.00100000010000
...................................................................................................................................................................................................................................................................GTAA-GCAAAA-CAAA--AAGGAAAAT.2311.00101000000000
.....................................................................................................................................................................................................................................................................AA-GCAAAA-CAAA--AAGGAAAAT.2111.00100000010000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-.......................1911.00100010000000
..............................................................................................................................................................................................................................................................TGT-CGTAA-GCAAAA-CAAA--AAGGAA....2411.00100000010000
...........................................................................................................AGATATGATG--TA-CTCTTGCA-ACC.........................................................................................................................................................2311.00100100000000
...................................................................................................................................................................................................................................................................GTAA-GCAAAA-CAAA--AAGGAAA...2111.00101000000000
..............................................................................................................................................................................................................................................CGCTAGCTTCAA-TTTTGT-C............................1911.00101000000000
.........................................................................................................................................................................................................................................................................CAAAA-CAAA--AAGGAAAATC1911.00100100000000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GCAAAA-C...............2311.00100100000000
.............................................................................................................................................................................................................TCT-TCGTCTATATCTT-TTGCA...........................................................2111.00101000000000
....................................................................................................................................................................................................................................................................TAA-GCAAAA-CAAA--AAGGAA....1911.00101000000000
...................................................................................................................................................................................................................................................GCTTCAA-TTTTGT-CGTAA-GCAAAA-C...............2511.00100100000000
................................................................................................A---CT-----AGATATGATG--TA-CTCTTGCA-ACCGAA......................................................................................................................................................2911.00100100000000
..............................................................................................................................................................................................................................................................TGT-CGTAA-GCAAAA-CAAA--AAG.......2111.00101000000000
..................................................................................................................................................................................................................................................................CGTAA-GCAAAA-CAAA--AAGGA.....2011.00101000000000
..............................................................................................................................................................................................................................................................TGT-CGTAA-GCAAAA-CAAA--AAGGAAAATC2811.00100000010000
..............................................................................................................................................................................................................CT-TCGTCTATATCTT-TTGCA...........................................................2011.00100000010000
...........................................................................................................................................................................................................................................................TTTTGT-CGTAA-GCAAAA-CAAA--AAGGAAA...2811.00100100000000
............................................................................................................................................................................................................................................TGCGCTAGCTTCAA-TTTTGT-CGTA.........................2411.00100000010000
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-CGT..........................2411.00100001000000
.........................................................................................................................................................................................................................................................A-TTTTGT-CGTAA-GCAAAA-CA..............2011.00101000000000
............................................................................................................................................................................................................................................................TTTGT-CGTAA-GCAAAA-CAAA--AAGG......2411.00100000010000
.................................................................................................................................................................................................................................................TAGCTTCAA-TTTTGT-CGTAA-GCA....................2311.00100000010000
..........................................................................................................................................................................................................................................................................AAAA-CAAA--AAGGAAAATC1820.50100001000000
droEug1
TTTTC-GCT---CGTTACGTAACTG----------T-GCTT-AG-GCGGC----------------------------------GGCG----TGGGA---TT-----TTTTATGATA--TA-GTCTTGAG-----A------T-CA------G-----------CCT-GAACTAA----------C--CGA-T-----------ATATCTCGTCTATATCTT-TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTCGT-CGTAA-ATCAAA-CAAAAAAAGGAAAATCSizeHit CountTotal NormTotal
No Reads
droBia1
TTTTC-GCT---CGTTACGTAACT-------------GCTG-AG-GCGGC-------------------------------------GTG--TGGGA--------------AAGATG------ACTTGAGAAAAGA-GGCCTT-CC---GCAG-------------CGAAACTAA----------C--CGA-T-----------ATA--CCGTCTATGTCT--TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCCAAA-CAAAAAAAGGAAAATCSizeHit CountTotal NormTotal
No Reads
droTak1
TTTTC-GCC---TGTTACGTAACCT----------TTTCTG-AG-GCGGC-------------------------------------GT-GT-GGGA---AA-----TGATATGATA--TG-ATCTA---------------T-GA------T-----------CCCAAAACTAA----------TC-CGA-T-----------AT---CCGTCTATATCTT-TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCCAAA-CAAAAAAAGGAAAATCSizeHit CountTotal NormTotal
No Reads
droEle1
TTTCC-G-----TGTTACGTAACTT----------TTTCTG-AG-GCGGC-------------------------------------GTG--TGGGA------------------TG--TAGTTCTTCAA-----A---TCTT-CA------A--------CCTCCCAAAACTAA----------T--CGA-T-----------ATATTCCGTCTATATCTT-TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCCAAAACAAAAAAAGGAAAATCSizeHit CountTotal NormTotal
No Reads
droRho1
TTT-C-GCT---CGTTACGTAACTT----------TTTCTG-AG-GCGGC-------------------------------------A----TGGGA---TT------------ATG-----TTCTTC-----AGA---TCTT-CA------G-----------CCC-CAACTAA----------C--CGA-T-----------ATATTCCGTCTATATCT--TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCAAAA-CAAAAAAAAGAAAATCSizeHit CountTotal NormTotal
No Reads
droFic1
TTTCC-GCT---CGTTACGTAACTT----------G-TCTG-AG-GCGGC-------------------------------------G----TGGGA----------------------TA-CTCTTC-----AGT---TCTT-CA------G-----------CCCCAAACTAA----------C--CGA-C-----------ATATCCCGTCTATATCTT-TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTCGT-CGTAA-GCCAAT-TAAAAAAAGGAAAATCSizeHit CountTotal NormTotal
No Reads
droKik1
TTTTC-GCACGGTGTTACGTAACTT----------T-TCTG-AG-GCGGC---------------------------G-CAGGCGGCGT-TT-GG----------------------------------------A---TCTT-T-------G-----------C-CACCACTAACGATAA----T--C-A-T-----------ATCT-CCGTCTATATCTT-TTGCAGAGC--CGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCCAAC-AAAA--AAAGAAAATCSizeHit CountTotal NormTotal
No Reads
droAna3
TTTTC-GCA---CATTACGTAACAA----------CTTCTG-AG-GCGGC---------------------------T----GCGGCGT-TT---G------ACATTT-----GA-------CAGCTGAG-----A--A---TCCAACTATTG-----------CCC-GATCTAA----------CC-CGA-T-----------ATAT-TCGTCTATATCT--TTGCAGAGCTCCGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCAAAATCTAAAAAAAAAAAATCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAA-T...................................21119.0019751006
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAA-TTTTGT-C............................27115.00153120000
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCA......................................19112.0012921000
.........................................................................................................................................................................................................................................................A-TTTTGT-CGTAA-GCAAAATC...............20111.00110000011
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTCA......................................2015.005200003
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-C............................2214.004021001
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTC.......................................1814.004040000
.............................................................................................................................................................................................................................................GCGCTAGCTTCAA-TTTTGT-C............................2013.003020001
........................................................................................................................................................................................................................................TCCGTGCGCTAGCTTCAA-TT..................................2013.003110001
...................................................................................................................................................................................................................................................GCTTCAA-TTTTGT-CGTAA-GCAAA..................2313.003000003
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GCA....................1913.003012000
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAA-TT..................................2213.003000003
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TTTTGT-.............................2212.002010001
.........................................................................................................................................................................................................................................CCGTGCGCTAGCTTCAA-TTT.................................2012.002020000
...........................................................................................................................AGCTGAG-----A--A---TCCAACTATT.......................................................................................................................................1912.002000002
...............................................................................................................................................................................................................................................GCTAGCTTCAA-TTTTGT-CGTA.........................2112.002000002
...................................................................................................................................................................................................................................................GCTTCAA-TTTTGT-CGTAA-GCAAAAT................2512.002000002
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAA-....................................2012.002011000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GC.....................1812.002020000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-GC.....................2112.002010001
...................................................................................................................................................................................................................................................GCTTCAA-TTTTGT-CGTAA-G......................1912.002101000
.......................................................................................................................................................................................................................................CTCCGTGCGCTAGCTTCAA-T...................................2012.002020000
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAA-TTT.................................2312.002100001
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAA-TTTTGT-.............................2612.002020000
.......................................................................................................................................................................................................................................CTCCGTGCGCTAGCTTCAA-TTTTGT-C............................2612.002011000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-GCA....................2211.001000001
......................................................................................................................................................................................................................................................TCAA-TTTTGT-CGTAA-GCAAA..................2011.001000001
.................................................................................................................................................................................................................................................TAGCTTCAA-TTTTGT-CGTAA-GCAAAAT................2711.001000001
.......................................................................................................................................................................................................................................CTCCGTGCGCTAGCTTCAA-TTTTGT-.............................2511.001100000
............................................................................................................................................................................................................................................TGCGCTAGCTTCAA-TTTTGT-C............................2111.001010000
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TTTTGT-C............................2311.001100000
...............................................................................................................................................................................................................................................GCTAGCTTCAA-TTTTGT-CGTAA-G......................2311.001001000
.........................................................................................................................................................................................................................................CCGTGCGCTAGCTTCAA-TTTTGT-C............................2411.001100000
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAA-TTTTGT-CGT..........................2911.001010000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTC.......................................1911.001100000
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TTT.................................1911.001000001
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-GCAAAA.................2511.001000001
...........................................................................................................................................................................................................................................................TTTTGT-CGTAA-GCAAAATC...............1911.001000001
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTCAA-TT..................................2311.001010000
..................................................................................................................................................................................................................................................................CGTAA-GCAAAATCTAAAAAAAAAA....2411.001010000
............................................................................................................................................................................................................................................TGCGCTAGCTTCAA-TTTTGT-CGTAA-GC.....................2711.001000001
.................................................................................................................................................................................................................................................TAGCTTCAA-TTTTGT-CGTAA-GCA....................2311.001000001
...................................................................................................................................................................................................................................................GCTTCAA-TTTTGT-CGTAA-GC.....................2011.001010000
........................................................................................................................................................................................................................................TCCGTGCGCTAGCTTCAA-TTTTGT-C............................2511.001010000
........................................................................................................................................................................................................................................TCCGTGCGCTAGCTTCAA-TTTTGT-CGT..........................2711.001010000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTCAA-TTTTGT-C............................2811.001010000
.......................................................................................................................................................................................................................................CTCCGTGCGCTAGCTTCAA-TT..................................2111.001010000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GCAAAA.................2211.001000001
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTCAA-C...................................2211.001010000
..............................................................................................................................................................................................................................................................TGT-CGTAA-GCAAAATCTAAAA..........2111.001000001
............................................................................................................................................................................................................................................................TTTGT-CGTAA-GCAAAATCTAA............2111.001010000
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-CGTA.........................2511.001000001
........................................................................................................................................................................................................................................TCCGTGCGCTAGCTTCAA-TTT.................................2111.001000010
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTCAA-TTTTGT-.............................2711.001010000
..............................................................................................................................................................................................................................................CGCTAGCTTCAA-TTTTGT-C............................1911.001010000
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TTTT................................2011.001100000
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAA-C...................................2111.001010000
.......................................................................................................................................................................................................................................CTCCGTGCGCTAGCTTCAA-....................................1911.001100000
.................................................................................................................GA-------CAGCTGAG-----A--A---TCCAAC...........................................................................................................................................1811.001010000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-G......................2011.001000001
........................................................................................................................................................................................................................................TCCGTGCGCTAGCTTCAA-TTTTGT-.............................2411.001010000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTCAA-....................................2111.001000001
......................................................................................................................................................................................................................................................TCAA-TTTTGT-CGTAA-GCAAAA.................2111.001000001
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTCAA-T...................................2211.001010000
.....................................TCTG-AG-GCGGC---------------------------T----GCGGCGT-TT---................................................................................................................................................................................................2111.001100000
.....................................................................................................................................................................................................................CTATATCT--TTGCAGAGCTCC....................................................2011.001001000
.........................................................................................................................................................................................................................................CCGTGCGCTAGCTTCAA-TT..................................1911.001000001
...........................................................................................................................................................................................................................................................TTTTGT-CGTAA-GCAAAACA...............1980.131100000
droBip1
TTTTT-GCA---CATTACGTAACT-------------TCTG-AG-GCGGC---------------------------T----GCGGCGT-TT---G------ACATTT-----GA-------CAGCTGAG-----AACC---C-CAACTATTG-----------CTC-GATCTAA----------C--CGA-C-----------ATA--ACGTCTATATCTT-TTGCAGAGCTCCGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCAAAATCTAA--AAAAAAAATCSizeHit CountTotal NormTotal
No Reads
dp5
TTTCC-ACC---CATTACGTAACAT----------T-TTGC-AG-GCGGTAGCGGCAGCAGCAGCAGCGACAGCGACA----GCGGCGT-TT---A------CCAAAT---GCA---AA------------------------------CT----TATTTATCGCATAGAACCTA----------T--AGTTT-----------ATTT-CCATCTATATCTT-TTGCAGAGCTCCGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCCAAT-CAAA--AAAAAAAATCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAA-TTTTGT-C............................27110.00100441100000
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCA......................................1918.0080600020000
.........................................................................................................................................................................................................................................................A-TTTTGT-CGTAA-GCCAAT-C...............1916.0060100040010
........................................................................................................................................................................................................................................TCCGTGCGCTAGCTTCAA-TTTTGT-CG...........................2615.0050301001000
........................................................................................................................................................................................................................................................AA-TTTTGT-CGTAA-GCCAAT-C...............2015.0050210020000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-GCC....................2214.0040103000000
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAA-T...................................2113.0030300000000
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAA-TTTTGT-.............................2613.0030300000000
........................................................................................................................................................................................................................................................AA-TTTTGT-CGTAA-GCCAAT-................1913.0030300000000
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAA-....................................2013.0030300000000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTC.......................................1913.0030101010000
....................................................................................................................................................................................................................................................CTTCAA-TTTTGT-CGTAA-GCCAAT-C...............2413.0030111000000
.......................................................................................................................................................................................................................................................CAA-TTTTGT-CGTAA-GCCAAT-C...............2112.0020002000000
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TTTTGT-C............................2312.0020200000000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTCAA-TTTTGT-C............................2812.0020001010000
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTC.......................................1812.0020011000000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTCAA-T...................................2212.0020100010000
.........................................................................................................................................................................................................................................CCGTGCGCTAGCTTCAA-TTTTGT-C............................2412.0020101000000
....................................................................................................................................................................................................................................................................TAA-GCCAAT-CAAA--AAAAAAAATC2312.0020002000000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GCCAAT-................2212.0020110000000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-GCCAAT-C...............2612.0020001010000
....................................................................................................................................................................................................................................................CTTCAA-TTTTGT-CGTAA-GCC....................2012.0020020000000
.......................................................................................................................................................................................................................................CTCCGTGCGCTAGCTTCAA-TTTTGT-C............................2611.0010000010000
........................................................................................................................................................................................................................................................AA-TTTTGT-CGTAA-GCCAAT-CA..............2111.0010000100000
...............................................................................................................................................................................................................................TTGCAGAGCTCCGTGCGCTAGCT.........................................2311.0010001000000
....................................................................................................................................................................................................................TCTATATCTT-TTGCAGAGCTCCGTGC................................................2611.0010001000000
...................................................................................................................................................................................................................................................................GTAA-GCCAAT-CAAA--AAAAAAAAT.2311.0010010000000
...................................................................................................................................................................................................................................................................GTAA-GCCAAT-CAAA--AAAAA.....1911.0010100000000
.............ATTACGTAACAT----------T-TTGC-AG-GC................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-G......................2011.0010000100000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTCAA-TTTTG...............................2611.0010001000000
............................................................................................................................................................................................................................................................TTTGT-CGTAA-GCCAAT-CAAA--AA........2211.0010000010000
....................................................................................................................................................................................................................................................CTTCAA-TTTTGT-CGTAA-GCCAA..................2211.0010000010000
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAA-TT..................................2211.0010001000000
........................................................................................................................................................................................................................................TCCGTGCGCTAGCTTCAA-TTTT................................2211.0010010000000
....................................................................................................................................................................................................................................................CTTCAA-TTTTGT-CGTAA-GCCAAT-................2311.0010100000000
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-C............................2211.0010000100000
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-CGTA.........................2511.0010010000000
....................AACAT----------T-TTGC-AG-GCGGTAGC..........................................................................................................................................................................................................................................2011.0010000000010
.............................................................................................................................................................................................................................................GCGCTAGCTTCAA-TTTTGT-CGTAA-GC.....................2611.0010001000000
...........................................................................................................................................................................................................................................................TTTTGT-CGTAA-GCCAAT-CAAA--AAA.......2411.0010001000000
.........................................................................................................................................................................................................................................CCGTGCGCTAGCTTCAA-TTTTGT-CG...........................2511.0010000001000
..................................................................................................................................................................................................................................CAGAGCTCCGTGCGCTAGCTT........................................2111.0010100000000
.........................................................................................................................................................................................................................................CCGTGCGCTAGCTTCAA-TTTTGT-CGTA.........................2711.0010010000000
........................................................................GCGACA----GCGGCGT-TT---A------CCAAAT---................................................................................................................................................................................2211.0010000001000
................................................................................................................................................................................................................................................CTAGCTTCAA-TTTTGT-CGTAA-GC.....................2311.0010010000000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GCCAAT-C...............2311.0010000010000
............................................................................................................................................................................................................................................TGCGCTAGCTTCAA-TTTTGT-CGTA.........................2411.0010000001000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTCAA-TT..................................2311.0010100000000
................................................................................................................................................................................................................................................CTAGCTTCAA-TTTTGT-CGT..........................1911.0010000100000
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-CG...........................2311.0010100000000
...........................................................................................................................................................................................................................................................TTTTGT-CGTAA-GCCAAT-CA..............1911.0010000010000
............................................................................................................................................................................................................................................TGCGCTAGCTTCAA-TTTTGT-CGTAA-G......................2611.0010100000000
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAA-TTTTGT-T............................2711.0010010000000
............................................................................................................................................................................................................................................TGCGCTAGCTTCAA-TT..................................1611.0010000000100
...............................................................................................................................................................TATCGCATAGAACCTA----------T--AGTTT-----------...................................................................................2211.0010100000000
.................................................................................................................................................................................................................................................TAGCTTCAA-TTTTGT-CGTAA-GCC....................2311.0010100000000
....................................................................................................................................................................................................................................................CTTCAA-TTTTGT-CGTAA-GC.....................1911.0010000100000
.............................................................................................................................................................................................................................................GCGCTAGCTTCAA-TTTTGT-C............................2011.0010010000000
...............................................................................................................GCA---AA------------------------------CT----TATTTATCGCATAGAACCTA----------T--A..................................................................................................2911.0010010000000
.......................................................................................................................................................................................................................................CTCCGTGCGCTAGCTTCAA-TTTTGT-CGTA.........................2911.0010000100000
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TTTT................................2011.0010000010000
.......................................................................................................................................................................................................................................CTCCGTGCGCTAGCTTCAA-TT..................................2111.0010100000000
..............................................................................................................................................................................................................................................................TGT-CGTAA-GCCAAT-CAAA--A.........1911.0010100000000
...........................................................................................................................................................................................................................CTT-TTGCAGAGCTCCGTGCGT..............................................2111.0010100000000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTCAA-TTTTGT-.............................2711.0010001000000
.........................................................................................................................................................................................................................................................A-TTTTGT-CGTAA-GCCAAT-CA..............2011.0010000010000
.........................................................................................................................................................................................................................................CCGTGCGCTAGCTTCAA-TTTTGT-.............................2311.0010100000000
.............................................................................................................................................................................................................................................................TTGT-CGTAA-GCCAAT-CAAA--AA........2111.0010100000000
.........................................................................................................................................................................................................................................................A-TTTTGT-CGTAA-GCCAAT-CAAA--..........2211.0010000010000
......................................................................................................................................................................................................................................................TCAA-TTTTGT-CGTAA-GCCAAT-CA..............2311.0010000001000
........................................................................................................................................................................................................................................TCCGTGCGCTAGCTTCAA-T...................................1911.0010000010000
............................................................................................................................................................................................................................................................TTTGT-CGTAA-GCCAAT-CAAA--..........2011.0010000010000
...................................................................................................................................................................................................................................................GCTTCAA-TTTTGT-CGTAA-GCCAAT-C...............2511.0010001000000
..............................................................................................................................................................................................TTT-----------ATTT-CCATCTATATCTT-T...............................................................2111.0010100000000
...............................................................................................................................................................................................................................................GCTAGCTTCAA-TTTTGT-CGT..........................2011.0010000010000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTCA......................................2011.0010000010000
......................................................................................................................................................................................................................................................TCAA-TTTTGT-CGTAA-GCCAAT-CAAA--AA........2711.0010000010000
...............................................................................................................................................................................................................................................GCTAGCTTCAA-TTTTGT-CGTA.........................2111.0010100000000
......................................................GCAGCAGCAGCAGCGACAGCG....................................................................................................................................................................................................................2180.1310100000000
..........................................................CAGCAGCAGCGACAGCGACA----G............................................................................................................................................................................................................2190.1110100000000
..........................................................CAGCAGCAGCGACAGCGAC..................................................................................................................................................................................................................19180.0610100000000
droPer2
TTTTCCACC---CATTACGTAACAT----------T-TTGC-AG-GCGGTAGCGGCAGCAGCAGCAGCG------ACA----GCGGCGT-TT---A------CCAAAT---GCA---AA------------------------------CT----TATTTATCGCATAGAACCTA----------T--AGTTT-----------ATTT-CCATCTATATCTT-TTGCAGAGCTCCGTGCGCTAGCTTCAA-TTTTGT-CGTAA-GCCAAT-CAAA--AAAAAAAATCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GCC....................19121.00211911000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GCCAAT-................22112.00121020000
........................................................................................................................................................................................................................................................AA-TTTTGT-CGTAA-GCCAAT-C...............20111.00111100000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GC.....................18110.00101000000
...................................................................................................................................................................................................................................................GCTTCAA-TTTTGT-CGTAA-G......................1918.008800000
......................................................................................................................................................................................................................................................TCAA-TTTTGT-CGTAA-GCC....................1818.008800000
.........................................................................................................................................................................................................................................................A-TTTTGT-CGTAA-GCCAAT-C...............1916.006600000
...........................................................................................................................................................................................................................................................TTTTGT-CGTAA-GCCAAT-C...............1816.006600000
........................................................................................................................................................................................................................................................AA-TTTTGT-CGTAA-GCCAAT-................1916.006222000
....................................................................................................................................................................................................................................................CTTCAA-TTTTGT-CGTAA-GC.....................1914.004400000
....................................................................................................................................................................................................................................................CTTCAA-TTTTGT-CGTAA-GCC....................2014.004310000
......................................................................................................................................................................................................................................................TCAA-TTTTGT-CGTAA-GCCAAT-C...............2213.003210000
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCA......................................1913.003030000
...............................................................................................................................................................................................................................................GCTAGCTTCAA-TTTTGT-CGTAA-G......................2313.003201000
.............................................................................................................................................................................................................................T-TTGCAGAGCTCCGTGCGCT.............................................2013.003300000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGT-CGTAA-GCCAAT-C...............2312.002010001
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTC.......................................1912.002020000
.......................................................................................................................................................................................................................................................CAA-TTTTGT-CGTAA-GCCAAT-................2012.002200000
....................................................................................................................................................................................................................................................CTTCAA-TTTTGT-CGTAA-GCCAAT-................2312.002110000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-GCCA...................2311.001010000
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAA-TTTTGT-.............................2211.001001000
.................................................................................................................................................................................................................................................TAGCTTCAA-TTTTGT-CGTAA-GCCAA..................2511.001010000
..............................................................................................................................................................................................................TT-CCATCTATATCTT-TTGCAT..........................................................2111.001010000
................................................................................................................................................................................................................................................CTAGCTTCAA-TTTTGT-CGTAA-GC.....................2311.001100000
.......................................................................................................................................................................................................................ATATCTT-TTGCAGAGCTCCGTGCGC..............................................2511.001010000
.............................................................................................................................................................................................................................................GCGCTAGCTTCAA-TTTTGT-CGTA.........................2311.001010000
........................................................................................................................................................................................................................................TCCGTGCGCTAGCTTCAA-T...................................1911.001010000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTCA......................................2011.001010000
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-CG...........................2311.001010000
..........................................................CAGCAGCAGCG------ACA----GCGGCG.......................................................................................................................................................................................................2011.001000010
............................................................................................................................................................................................................................................TGCGCTAGCTTCAA-TTTTGT-CG...........................2211.001000001
......................................................................................................................................................................................................................................................TCAA-TTTTGT-CGTAA-GCCAAT-CAAA--..........2511.001010000
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAA-TTTTGT-CGTAA-G......................2711.001100000
.......................................................................................................................................................................................................................................CTCCGTGCGCTAGCTTCAA-TTT.................................2211.001001000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTCAA-....................................2111.001010000
............................................................................................................................................................................................................................................................TTTGT-CGTAA-GCCAAT-CAAA--..........2011.001010000
.............................................................................................................................................................................................................................T-TTGCAGAGCTCCGTGCGCC.............................................2011.001100000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTCAA-TTTTGT-C............................2811.001010000
........................................................................................................................................................................................................................................TCCGTGCGCTAGCTTCAA-TT..................................2011.001010000
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAA-TTTTGT-C............................2711.001001000
.........................................................................................................................................................................................................................................................A-TTTTGT-CGTAA-GCCAAT-CA..............2011.001000100
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAA-TT..................................2211.001010000
..............................................................................................................................................................................................................................................................TGT-CGTAA-GCCAAT-CAAA--AAA.......2111.001010000
.....................................TTGC-AG-GCGGTAGCGGCAGC....................................................................................................................................................................................................................................2011.001010000
............................................................................................................................................................ATTTATCGCATAGAACCT.................................................................................................................1811.001100000
..................................................................................................................................................................................................................................................AGCTTCAA-TTTTGT-CGTAA-G......................2011.001001000
...............................................................................................................................................................................................................................................................GT-CGTAA-GCCAAT-CAAA--AAAAAAA...2411.001010000
.........................................................GCAGCAGCAGCG------ACA----GCGGC........................................................................................................................................................................................................2060.171001000
droWil2
TTTCC-CTG---CATTACGTAACTAAC--------A-TCGCAAG-GCGGC---------------------------AGCA-GC---G----GCGGATTA--ACA--------------TT-TTCGCAAA-ACAG----TTT-------ACAG-----------TT--AGATTAA----------TCTCAA-T-----------A------ATTTATATCTTTTTGCAGAGCTCCGTGCGCTAGCTTCAAGTTTTGT-CGTAA-GCCAAT-CCAAAAAAAAGAAATCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................GTAA-GCCAAT-CCAAAAAAAAGA....22115.0015001131
.....................................................................................................................................................................................................................................................TTCAAGTTTTGT-CGTAA-GC.....................19113.001380050
.....................................................................................................................................................................................................................................................TTCAAGTTTTGT-CGTAA-GCC....................20112.001241160
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAAGTTTTGT-C............................23111.0011000110
........................................................................................................................................................................................................................................................AAGTTTTGT-CGTAA-GCCA...................18111.0011000110
.........................................................................................................................................................................................................................................................AGTTTTGT-CGTAA-GCCAAT-C...............20111.001150240
..........................................................................................................................................................................................................................................................GTTTTGT-CGTAA-GCCAAT-C...............19111.001131070
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAAGTTTTGT-C............................2819.00902070
..................................................................................................................................................................................................................................................................CGTAA-GCCAAT-CCAAAAAAAAGA....2319.00900090
.......................................................................................................................................................................................................................................................CAAGTTTTGT-CGTAA-GCCA...................1918.00800080
......................................................................................................................................................................................................................................................TCAAGTTTTGT-CGTAA-GCC....................1917.00750020
...........................................................................................................................................................................................................................................................TTTTGT-CGTAA-GCCAAT-C...............1816.00660000
........................................................................................................................................................................................................................................................AAGTTTTGT-CGTAA-GCCAAT-C...............2116.00610050
......................................................................................................................................................................................................................................................TCAAGTTTTGT-CGTAA-GCCA...................2016.00601140
...................................................................................................................................................................................................................................................GCTTCAAGTTTTGT-CGTAA-GC.....................2116.00610050
...................................................................................................................................................................................................................................................GCTTCAAGTTTTGT-CGTAA-GCC....................2216.00620040
..............................................................................................................................................................................................................................................CGCTAGCTTCAAGTTTTGT-C............................2015.00500050
....................................................................................................................................................................................................................................................CTTCAAGTTTTGT-CGTAA-GCC....................2115.00530110
......................................................................................................................................................................................................................................................TCAAGTTTTGT-CGTAA-GC.....................1815.00540010
.....................................................................................................................................................................................................................................................TTCAAGTTTTGT-CGTAA-GCCA...................2115.00500050
..........................................................................................................................................................................................................................................................GTTTTGT-CGTAA-GCCAAT-CC..............2014.00400040
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCA......................................1914.00402020
.......................................................................................................................................................................................................................................CTCCGTGCGCTAGCTTCAAGTTTTGT-C............................2714.00401030
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAAGT...................................2214.00400040
....................................................................................................................................................................................................................................................CTTCAAGTTTTGT-CGTAA-GC.....................2014.00430010
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAAGTT..................................2313.00301020
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAAGTTTTGT-.............................2213.00300030
...................................................................................................................................................................................................................................................................GTAA-GCCAAT-CCAAAAAAAAGAAAT.2513.00301020
...................................................................................................................................................................................................................................................................GTAA-GCCAAT-CCAAAAAAAAGAAATC2613.00301020
......................................................................................................................................................................................................................................................TCAAGTTTTGT-CGTAA-GCCAAT-................2213.00301020
...............................................................................................................................................................................................................................................GCTAGCTTCAAGTTTTGT-C............................1913.00300030
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAAGTTTTGT-CGTA.........................2613.00320010
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAAGTTTTGT-CGTA.........................2713.00300030
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAAGTTTTGT-.............................2713.00301020
.........................................................................................................................................................................................................................................CCGTGCGCTAGCTTCAAGTTTTGT-C............................2513.00300030
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAAGTTTTGT-C............................2413.00300030
.......................................................................................................................................................................................................................................................CAAGTTTTGT-CGTAA-GCC....................1813.00320010
......................................................................................................................................................................................................................................................................A-GCCAAT-CCAAAAAAAAGA....1913.00300030
.......................................................................................................................................................................................................................................CTCCGTGCGCTAGCTTCAA.....................................1912.00200020
.........................................................................................................................................................................................................................................CCGTGCGCTAGCTTCAAGT...................................1912.00200011
..................................................................................................................................................................................................................................................AGCTTCAAGTTTTGT-CGTAA-GC.....................2212.00200020
................................................................................................................................................................................................................................................CTAGCTTCAAGTTTTGT-C............................1812.00200020
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAAGTTT.................................2412.00200020
..............................................................................................................................................................................................................................................CGCTAGCTTCAAGTTTTGT-CGTAA-GC.....................2612.00200020
...................................................................................................................................................................................................................................................GCTTCAAGTTTTGT-CGTAA-G......................2012.00200020
......................................................................................................................................................................................................................................GCTCCGTGCGCTAGCTTCAA.....................................2012.00201010
............................................................................................................................................................................................................................................TGCGCTAGCTTCAAGTTTTGT-C............................2212.00202000
......................................................................................................................................................................................................................................................TCAAGTTTTGT-CGTAA-GCCAA..................2112.00210010
.............................................................................................................................................................................................................................................GCGCTAGCTTCAAGTTTTGT-CGTA.........................2412.00200020
......................................................................................................................................................................................................................................................TCAAGTTTTGT-CGTAA-GCCAAT-C...............2312.00200020
........................................................................................................................................................................................................................................................AAGTTTTGT-CGTAA-GCCAAT-CC..............2212.00201010
...................................................................................................................................................................................................................................................GCTTCAAGTTTTGT-CGTAA-GCCAAT-CC..............2712.00200020
..............................................................................................................................................................................................................................................CGCTAGCTTCAAGTTTTGT-CGTAA-G......................2512.00200020
...............................................................................................................................................................................................................................................GCTAGCTTCAAGTTTTGT-CGTAA-G......................2412.00210010
........................................................................................................................................................................................................................................TCCGTGCGCTAGCTTCAAGT...................................2012.00201010
.....................................................................................................................................................................................................................................................TTCAAGTTTTGT-CGTAA-G......................1812.00200020
...........................................................................................................................................................................................................................................................TTTTGT-CGTAA-GCCAAT-CC..............1911.00110000
................................................................................................................................................................................................................................................................T-CGTAA-GCCAAT-CCAAAA..........1811.00101000
...........................................................................................................................................................................................................................CTTTTTGCAGAGCTCCGTGCG...............................................2111.00100010
..................................................................................................................................................................................................................................................AGCTTCAAGTTTTGT-CGTAA-GCCAAT-CC..............2811.00101000
..................................................................................................................................................................................................................................................................CGTAA-GCCAAT-CCAAAAAAAA......2111.00100010
..................................................................................................................................................................................................................................................AGCTTCAAGTTTTGT-CGT..........................1811.00100010
....................................................................................................................................................................................................................................................CTTCAAGTTTTGT-CGTAA-GCCAAT-C...............2511.00100100
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAAGTTTTG...............................2211.00100001
..................................................................................................................................................................................................................................................AGCTTCAAGTTTTGT-CGTAA-.......................2011.00100010
...............................................................................................................................................................................................................................................................GT-CGTAA-GCCAAT-CCAAA...........1811.00110000
...................................................................................................................................................................................................................................................................GTAA-GCCAAT-CCAAAAAAAA......2011.00100010
........................................................................................................................................................................................................................................TCCGTGCGCTAGCTTCAA.....................................1811.00100010
......................................................................................................................................................................................................................................................TCAAGTTTTGT-CGTAA-GCCAAT-CCAAAAA.........2911.00100100
.......................................................................................................................................................................................................................................CTCCGTGCGCTAGCTTCAAGTTT.................................2311.00100010
...........................................................................................................................................................................................................................................................................AAT-CCAAAAAAAAGAAATC1911.00110000
..........................................................................................................................................................................................................................................................................CAAT-CCAAAAAAAAGAAAT.1911.00100010
..............................................................................................................................................................................................................................................CGCTAGCTTCAAGTTTTGT-CG...........................2111.00100010
.........................................................................................................................................................................................................................................................AGTTTTGT-CGTAA-GCCAAT-................1911.00100010
.............................................................................................................................................................................................................................................GCGCTAGCTTCAAGTTTTGT-C............................2111.00100010
.......................................................................................................................................................................................................................................................CAAGTTTTGT-CGTAA-GCCAAT-CCAAAA..........2711.00100010
...............................................................................................................................................................................................................................................GCTAGCTTCAAGTTTTGT-CG...........................2011.00100100
..........................................................................................................................................................................................................................................................GTTTTGT-CGTAA-GCCAAT-................1811.00101000
........................................................................................................................................................................................................................................................AAGTTTTGT-CGTAA-GCCAAT-CCAAAAA.........2711.00100010
...................................................................................................................................................................................................................................................GCTTCAAGTTTTGT-CGTAA-GCCA...................2311.00100010
.......................................................................................................................................................................................................................................................CAAGTTTTGT-CGTAA-GCCAAT-C...............2211.00100100
....................................................................................................................................................................................................................................................CTTCAAGTTTTGT-CGTAA-GCCAAT-CC..............2611.00100010
...................................................................................................................................................................................................................................................................GTAA-GCCAAT-CCAAAAAAA.......1911.00101000
.......................TAAC--------A-TCGCAAG-GCGGC---------------------------AGC...............................................................................................................................................................................................................2011.00100010
...................TAACTAAC--------A-TCGCAAG-GCGG..............................................................................................................................................................................................................................................2011.00110000
.................................................................................................................................................................................................................................................TAGCTTCAAGTTTTGT-CGTAA-G......................2211.00110000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTAGCTTCA......................................2011.00101000
..................................................................................................................................................................................................................................................AGCTTCAAGTTTTGT-CGTAA-GCC....................2311.00100010
..................................................................................................................................................................................................................................................................CGTAA-GCCAAT-CCAAAAAAAAGAA...2411.00101000
.........................................................................................................................................................................................................................................................AGTTTTGT-CGTAA-GCCAAT-CCAAAA..........2511.00101000
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAAGTTTTGT-.............................2311.00100010
.......................................................................................................................................................................................................................................CTCCGTGCGCTAGCTTCA......................................1811.00110000
........................................................................................................................................................................................................................................TCCGTGCGCTAGCTTCAAGTTT.................................2211.00100010
.................................................C---------------------------AGCA-GC---G----GCGGATTA--AC.......................................................................................................................................................................................1811.00110000
....................................................................................................................................................................................................................................................CTTCAAGTTTTGT-CGTAA-GCCAAT-................2411.00100010
.....................................................................................................................................................................................................................TTATATCTTTTTGCAGAGCTCCGTGCGC..............................................2811.00100100
...................................................................................................................................................................................................................................................GCTTCAAGTTTTGT-CGTA.........................1811.00101000
.........................................................................................................................................................................................................................................CCGTGCGCTAGCTTCAAGTTTTGT-CG...........................2611.00100010
.....................................................................................................................................................................................................................................................TTCAAGTTTTGT-CGTAA-GCCAAT-................2311.00100100
...............................................................................................................................................................................................................................................GCTAGCTTCAAGTTTTGT-CGT..........................2111.00110000
..................................................................................................................................................................................................................................................................CGTAA-GCCAAT-CCAAAAAA........1911.00100010
...............TACGTAACTAAC--------A-TCGCAAG-GCGGC---------------------------AGC...............................................................................................................................................................................................................2811.00100010
......................................................................................................................................................................................................................................................................A-GCCAAT-CCAAAAAAAAGAAATC2311.00100010
.....................................................................................................................................................................................................................TTATATCTTTTTGCAGAGCTCC....................................................2211.00100100
................................................................................................................................................................................................................................................CTAGCTTCAAGTTTTGT-CGTAA-G......................2311.00100010
.......................................................................................................................................................................................................................................................CAAGTTTTGT-CGTAA-GCCAAT-CCA.............2411.00100010
..............................................................................................................................................................................................................................................CGCTAGCTTCAAGTTTTGT-CGTAA-GCC....................2711.00100010
...............................................................................................................................................................................................................................................GCTAGCTTCAAGTTTTGT-CGTAA-GC.....................2511.00100010
.......................................................................................................................................................................................................................................CTCCGTGCGCTAGCTTCAAGTTTTGT-.............................2611.00100010
..................................................................................................................................................................................................................................................AGCTTCAAGTTTTGT-CGTAA-G......................2111.00100010
..........................................................................................................................................................................................................................................CGTGCGCTAGCTTCAAGTT..................................1911.00100010
.........................................................................................................................................................................................................................................CCGTGCGCTAGCTTCAAGTT..................................2011.00100010
................................................................................................................................................................................................................................................CTAGCTTCAAGTTTTGT-CGTAA-GCCA...................2611.00101000
.........................................................................................................................................................................................................................................................AGTTTTGT-CGTAA-GCCAAT-CC..............2111.00110000
...................................................................................................................................................................................................................................................GCTTCAAGTTTTGT-CGTAA-GCCAAT-C...............2611.00100010
...................................................................................................................................................................................................................................................................GTAA-GCCAAT-CCAAAAAAAAGAAA..2411.00100010
...........................................................................................................................................................................................................................................GTGCGCTAGCTTCAAGTTTTGT-CGT..........................2511.00100010
......................................................................................................................................................................................................................................................................A-GCCAAT-CCAAAAAAAAGAAAT.2211.00101000
...................................................................................................................................................................................................................................................................GTAA-GCCAAT-CCAAAAAAAGA.....2130.33100010
droVir3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-C-----------ATCT-ACATCTATATCTT-TTGCAGAGCTCCGTGCGCTTGCTTCAA-TTTTGTGCGAAACGCCAAT-T--------ACAATTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................GCTCCGTGCGCTTGCTTCA......................................19116.0016007000000000000004200110000000000000000000000000000000000001000
......................................................................................................................................................................................................................................GCTCCGTGCGCTTGCTTCAA-T...................................21116.0016003000000000001106020200000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................TGCTTCAA-TTTTGTGCGAAACGCC....................24113.0013007000000000000011020100000000000000000000000000000000000000100
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTTGCTTCA......................................20110.0010003000000000000004120000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GCTCCGTGCGCTTGCTTCAA-TTTTGTGC............................28110.0010001200000000000005100000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................A-TTTTGTGCGAAACGCCAAT-T--------.......2119.009001000000000000006100010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TGCTTCAA-TTTTGTGCGAAA........................2017.007000000000000001003300000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TTTGTGCGAAACGCCAAT-T--------.......1917.007000000000000000105000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................A-TTTTGTGCGAAACGCCAAT-................2017.007000000000000000015010000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTTGCTTC.......................................1916.006003000000000000001100000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................GCTCCGTGCGCTTGCTTCAA-TTTTGTG.............................2715.005003000000000000000110000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TTTTGTGCGAAACGCCAAT-T--------.......2015.005000000000000000003010100000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................GCGCTTGCTTCAA-TTTTGTGC............................2114.004002100000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................GCTTGCTTCAA-TTTTGTGC............................1914.004002100000000010000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CTCCGTGCGCTTGCTTCAA-TT..................................2114.004000000000000000003100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TCAA-TTTTGTGCGAAACGCC....................2014.004002100000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................GCTCCGTGCGCTTGCTTCAA-....................................2014.004002000000000000101000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................A-TTTTGTGCGAAACGCCAAT-T--------ACA....2413.003000000000000000002010000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TTGTGCGAAACGCCAAT-T--------AC.....2013.003000000000000000001020000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................AA-TTTTGTGCGAAACGCCAAT-T--------.......2213.003000000000000001001100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGTGCGAAACGCC....................2113.003001000000000000000000100000000001000000000000000000000000000000
..................................................................................................................................................................................................................................................TGCTTCAA-TTTTGTGCGAAACGC.....................2313.003000000000000000011100000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................AA-TTTTGTGCGAAACGCCAAT-T--------A......2313.003000000000000000002100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CCGTGCGCTTGCTTCAA-TTTTGTGCGA..........................2713.003001000000000000002000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TCAA-TTTTGTGCGAAACGCCA...................2113.003003000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................A-TTTTGTGCGAAACGCCAAT-T--------ACAATTC2812.002001000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................CGCTTGCTTCAA-TTTTGTGCGA..........................2212.002000000000000001000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................AA-TTTTGTGCGAAACGCCAAT-................2112.002000000000000000002000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TCCGTGCGCTTGCTTCAA-T...................................1912.002000000000000001001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CGTGCGCTTGCTTCAA-TTTTGTG.............................2312.002000000000000000101000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GCTCCGTGCGCTTGCTTCAA-TT..................................2212.002000000000000000000200000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CGTGCGCTTGCTTCAA-TTTTGTGCG...........................2512.002000000000000000002000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CTCCGTGCGCTTGCTTCAA-TTTTGTG.............................2612.002001000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................CAA-TTTTGTGCGAAACGCCAAT-T--------.......2312.002001000000000000000010000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CCGTGCGCTTGCTTCAA-TTTTGTG.............................2412.002000000000000000100000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................GCTCCGTGCGCTTGCTTCAA-TTT.................................2312.002000000000000000001100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTTGCTTCAA-T...................................2212.002001000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGTGCGAAACGCCA...................2212.002000100000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TTTGTGCGAAACGCCAAT-T--------AC.....2112.002000000000000000001100000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CAA-TTTTGTGCGAAACGCCA...................2012.002001000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CGTGCGCTTGCTTCAA-TTTTGTGCGAAA........................2812.002000000000000000002000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................GCTTGCTTCAA-TTTTGTGCG...........................2012.002000000000000000001000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................TTTGTGCGAAACGCCAAT-T--------ACA....2212.002000000000000000011000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TTTTGTGCGAAACGCCAAT-T--------AC.....2212.002001000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................GTGCGCTTGCTTCAA-TTTTGTGC............................2312.002000000000000000001000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................A-TTTTGTGCGAAACGCCAA..................1912.002001000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TCCGTGCGCTTGCTTCAA-TTTTGTGC............................2612.002000000000000000000000000010001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CAA-TTTTGTGCGAAACGCCAA..................2112.002001000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TTTTGTGCGAAACGCCAAT-T--------A......2112.002000000000000000001000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................A-TTTTGTGCGAAACGCCAAT-T--------A......2212.002001000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................GTGCGAAACGCCAAT-T--------ACAAT..2112.002001000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TTGCTTCAA-TTTTGTGCGAAACGC.....................2412.002000000000000000010000000000000000100000000000000000000000000000
..................................................................................................................................................................................................................................................TGCTTCAA-TTTTGTGCGAAACGCCAA..................2612.002000000000000000001010000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CGTGCGCTTGCTTCAA-TTTTGTGC............................2412.002000100000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TTTGTGCGAAACGCCAAT-T--------ACAATTC2611.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGTGCGAAACGCCAAT-................2411.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CTCCGTGCGCTTGCTTCAA-TTTTGT..............................2511.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TTGCTTCAA-TTTTGTGCG...........................1811.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................GCTCCGTGCGCTTGCTTCAA-TTTT................................2411.001000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CAA-TTTTGTGCGAAACGCCAAT-T--------AC.....2511.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TTGCTTCAA-TTTTGTGCGA..........................1911.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................A-TTTTGTGCGAAACGCCAAT-T--------ACAAT..2611.001000000000000000010000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TTTTGTGCGAAACGCCAAT-T--------ACA....2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CTCCGTGCGCTTGCTTCAA-T...................................2011.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................AGAGCTCCGTGCGCTTGCTT........................................2011.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CCGTGCGCTTGCTTCAA-T...................................1811.001000000000000000000010000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................A-TTTTGTGCGAAACGCCAAT-T--------ACAATT.2711.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................ATATCTT-TTGCAGAGCTCCGTG.................................................2211.001000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................CTTCAA-TTTTGTGCGAAACGCCAAT-T--------.......2611.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................ATCTT-TTGCAGAGCTCCGTG.................................................2011.001000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TTTTGTGCGAAACGCCAAT-T--------ACAAT..2511.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CCGTGCGCTTGCTTCAA-TTTTGTGC............................2511.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TGCGCTTGCTTCAA-TTTTGTG.............................2111.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CGAAACGCCAAT-T--------ACAATTC2011.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CGTGCGCTTGCTTCAA-TTTTGTGCGA..........................2611.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GCTTCAA-TTTTGTGCGAAA........................1911.001000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................GCGCTTGCTTCAA-TTTTGTGCGAAACGCC....................2911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................AA-TTTTGTGCGAAACGCCAA..................2011.001000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TGTGCGAAACGCCAAT-T--------AC.....1911.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTTGCTTCAA-TTTTGTGC............................2911.001000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TTGCTTCAA-TTTTGTGCGAAACGCCAAT-................2811.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................GTGCGAAACGCCAAT-T--------ACA....1911.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GCTCCGTGCGCTTGCTTCAA-TTTTGT..............................2611.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TCCGTGCGCTTGCTTCAA-TTTTG...............................2311.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................T-TTGCAGAGCTCCGTGCGCT.............................................2011.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TTGTGCGAAACGCCAAT-T--------ACAATT.2411.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TTTTGTGCGAAACGCCAAT-................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TGCTTCAA-TTTTGTGCGAAACGCCAAT-................2711.001000000000000000000000000000000000000000000000000000000000000001
..............................................................................................................................................................................................................................................CGCTTGCTTCAA-TTTTGTGC............................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TGCTTCAA-TTTTGTGCGA..........................1811.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................AGAGCTCCGTGCGCTTGCT.........................................1911.001000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CTCCGTGCGCTTGCTTCAA-TTTTGTGC............................2711.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................GCGCTTGCTTCAA-TTTTGT..............................1911.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................C-----------ATCT-ACATCTATATCTT-TTGCAG..........................................................2411.001000000000000000000000000000010000000000000000000000000000000000
................................................................................................................................................................................................................................................................TGCGAAACGCCAAT-T--------ACAA...1911.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TGCTTCAA-TTTTGTGCGAAAC.......................2111.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................A-TTTTGTGCGAAACGCCA...................1811.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................AA-TTTTGTGCGAAACGCCAAT-T--------AC.....2411.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CGAAACGCCAAT-T--------ACAATT.1911.001000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TCAA-TTTTGTGCGAAACGCCAAT-................2311.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TTGTGCGAAACGCCAAT-T--------ACA....2111.001000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CAA-TTTTGTGCGAAACGCCAAT-................2211.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GCTCCGTGCGCTTGCTTCAA-TTTTGTGCG...........................2911.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CTCCGTGCGCTTGCTTCA......................................1811.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................GTGCGAAACGCCAAT-T--------ACAATTC2311.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TGCTTCAA-TTTTGTGCGAAACGCCA...................2511.001000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CCGTGCGCTTGCTTCAA-TTTTG...............................2211.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGTGCGAAACG......................1911.001000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TTTGTGCGAAACGCCAAT-T--------ACAAT..2411.001000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................GTGCGCTTGCTTCAA-TTTTGTGCGAAA........................2711.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TTGCTTCAA-TTTTGTGCGAAACGCC....................2511.001000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TTGCTTCAA-TTTTGTGCGAAA........................2111.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................ATCT-ACATCTATATCTT-TTGCAG..........................................................2311.001000000000000000000000001000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CCGTGCGCTTGCTTCAA-TTT.................................2011.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GCTTCAA-TTTTGTGCGAAACGCCA...................2411.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TCCGTGCGCTTGCTTCAA-TT..................................2011.001000000000000000000010000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TGCGAAACGCCAAT-T--------ACA....1811.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TCAA-TTTTGTGCGAAACGCCAAT-T--------.......2411.001000000000000001000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................GCTTGCTTCAA-TTTTGTGCGAAA........................2311.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CTCCGTGCGCTTGCTTCAA-....................................1911.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................GTGCGCTTGCTTCAA-TTTT................................1911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TGCGCTTGCTTCAA-TTTTGTGCGAA.........................2511.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TTGCTTCAA-TTTTGTGCGAAAC.......................2211.001000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TCAA-TTTTGTGCGAAACGC.....................1911.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGTGCGAAACGC.....................2011.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GCTCCGTGCGCTTGCTTC.......................................1811.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTTGCTTCAA-TTT.................................2411.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TGCGAAACGCCAAT-T--------ACAAT..2011.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TGCGCTTGCTTCAA-TTTTGTGCGAAA........................2611.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TCAA-TTTTGTGCGAAACGCCAA..................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CCGTGCGCTTGCTTCAA-TTTTGTGCGAA.........................2811.001000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................TGCGAAACGCCAAT-T--------ACAATT.2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................CT-ACATCTATATCTT-TTGCAG..........................................................2111.001000000000000000000000000100000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CAA-TTTTGTGCGAAACGCC....................1911.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TTCAA-TTTTGTGCGAAACGCCAAT-T--------ACA....2811.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................CGCTTGCTTCAA-TTTTGTGCGAA.........................2311.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GCTTCAA-TTTTGTGCGAAACG......................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TTGTGCGAAACGCCAAT-T--------ACAATTC2511.001000000000000000000000000000000000000000000000000000000000000001
droMoj3
TTTTT-TCC---CATTACGTAACCAACAGCA---AC-TTGC-AGGCGGGC---------------------------A----GCGGCGT-TT---GCGGC--ACC--------------GA-TTC-----------------G-CAACAATTATATATTTA-CACATATATATAAATAAAAATAT-----A-TATTTACAAAAAATCT-ACATCTATATCTT-TTGCAGAGCTCCGTGCGCTTGCTTCAA-TTTTGTGCGAAACGCCAAT-T--------AAAATTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................GCTCCGTGCGCTTGCTTCA......................................1916.006600000
........................................................................................................................................................................................................................................................AA-TTTTGTGCGAAACGCCA...................1912.002200000
.......................................................................................................................................................................................................................................................CAA-TTTTGTGCGAAACGCCA...................2011.001100000
..................................................................................................................................................................................................................................................TGCTTCAA-TTTTGTGCGAAA........................2011.001000001
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTTGCTTCA......................................2011.001100000
......................................................................................................................................................................................................................................GCTCCGTGCGCTTGCTTCAA-TT..................................2211.001100000
.......................................................................................................................................................................................................................................CTCCGTGCGCTTGCTTCAA-TTTTGTGC............................2711.001100000
.......................................................................................................................................................................................................................................CTCCGTGCGCTTGCTTCAA-....................................1911.001100000
......................................................................................................................................................................................................................................GCTCCGTGCGCTTGCTTCAA-TTTTGTGCG...........................2911.001100000
......................................................................................................................................................................................................................................................TCAA-TTTTGTGCGAAACGCC....................2011.001001000
...........................................................................................................................................................................................................AATCT-ACATCTATATCTT-TTG.............................................................2111.001000010
.................................................................................................................................................................................................................................................TTGCTTCAA-TTTTGTGCGAAACGC.....................2411.001100000
..................................................................................................................................................................................................................................................TGCTTCAA-TTTTGTGCGAAACGCC....................2411.001100000
.....................................................................................................................................................................................................................................AGCTCCGTGCGCTTGCTTC.......................................1911.001100000
.................................................................................................................................................................................................................................................TTGCTTCAA-TTTTGTGCGAAACGCCA...................2611.001100000
.......................................................................................................................................................................................................................................CTCCGTGCGCTTGCTTCAA-T...................................2011.001100000
......................................................................................................................................................................................................................................GCTCCGTGCGCTTGCTTCAA-T...................................2111.001100000
......................................................................................................................................................................................................................................GCTCCGTGCGCTTGCTTCAA-....................................2011.001100000
........................................................................................................................................................................................................AAAAATCT-ACATCTATATCTT-TTGC............................................................2511.001000010
...................................................................................................................................................................................................................................................GCTTCAA-TTTTGTGCGAA.........................1811.001100000
..........................................................................................................................................................................................................................................CGTGCGCTTGCTTCAA-TTTTGTGCGA..........................2611.001100000
........................................................................................................................................................................................................................................TCCGTGCGCTTGCTTCAA-TTTTGTGC............................2611.001100000
..........................................................................................................................................................................................................................................CGTGCGCTTGCTTCAA-TTTTGTGC............................2411.001100000
droGri2
TTTTT-TTCCATTGTTACGTAACCAGCAGCAGATAA-TTGC-AG-GCGGC-------------------------------------A----TTCAA---CT------CAAACACAG--TT-TTTATGGT-TTAAA----------------------------------TATAAATATAAACAT-----A-TATTTACAAGAAAT---T--TATATATCTTTTTGCAGAGCTACGTGCGCTTGCTTCAAGTTTTGTGCGAAACGCCAAT-TATT---AAAAAAATCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................................................................................................................GCTACGTGCGCTTGCTTCA......................................1911.00110
.........................................................................................................................................................................................................................................................AGTTTTGTGCGAAACGCCAA..................2011.00110
.......................................................................................................................................................................................................................................................CAAGTTTTGTGCGAAACG......................1811.00110
...............................................................................................................................................................................................................................................GCTTGCTTCAAGTTTTGTGCG...........................2111.00110

Generated: 05/19/2015 at 03:05 AM