ID:

dsi_30432

 Coordinate:

3r:11279497-11279740 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-38.4 -38.2 -38.2

Flybase annnotation

exon [3r_11279741_11279965_-]; CDS [3r_11279741_11279965_-]; exon [3r_11279304_11279496_-]; CDS [3r_11279304_11279496_-]; intron [3r_11279497_11279740_-]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACGGGCACCATGGCGGATGAGCTGACGCTGTGCACCCAGCAGCAGCAAGGGTCAGTTCTCGATGGCTGTTTACCTCAGTTTGTTTAAGTGCCCATATATGTCACACAATATGTCCCGGTCCCACCAAACCTTTTGTTGTTTCATATAATTTATTGCATGCCGTATAGAAAATCAAACTAGCTTGAGCTTTGCACGTTGACTGACCTCAGATATTTTTCGCGTAATATAAAACCGATCTATAAAGTCACCATCTCTTCTCGTTCTTGCCACCCAACGATCGTACGGTTGGAGCAGGTTCAGTGCCGCCTCGGGACTCCCCTCGCAGCCCCCGCCCCCGCCCTACC
**************************************************(((((...((((((((.(((((.((.((((((.....((((...((((((..((((((...((...(((...)))..))...))).)))..)))))).......))))..............))))))))..)))))...)).)))))))))))......(((...(((.((........)))))...)))......................((((...(((((.........))))).))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
.............................................................................................................................................................................................................................................................................CCCAACGATCGTACGGTTGGAA..................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0
..............GGATGAGCTGACGCTGTG........................................................................................................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................................................................CACCCAACGATCGTACGGTTGGA...................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................CCACCCAACGATCGTACGGTTGGAGC.................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................CCAACGATCGTACGGTTG........................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........GGCGGATGAGCTGACGCT........................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................TCAGTGCCGCCTCGGGACTCCCCT........................ 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.........ATGGCGGATGAGCTGACGCTGTGCACCC................................................................................................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................TTGCACGTTGACTGACCG.......................................................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................GCCGCCTCGGGACTC............................ 15 0 1 1.00 1 0 0 0 0 0 0 1 0 0
...............GATGAGCTGACGCTGTGCACC.................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
....GCACCATGGCGGATGAGCTGACGCT........................................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................CGCCGCGGGACTCCC.......................... 15 1 3 0.33 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................................TATTACCTGCCGTATAAAAA.............................................................................................................................................................................. 20 3 8 0.13 1 0 0 0 0 0 0 0 1 0
..CAGCACCATGGCCGATGAG................................................................................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0
............GCGGATGAGCAGACG............................................................................................................................................................................................................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TGCCCGTGGTACCGCCTACTCGACTGCGACACGTGGGTCGTCGTCGTTCCCAGTCAAGAGCTACCGACAAATGGAGTCAAACAAATTCACGGGTATATACAGTGTGTTATACAGGGCCAGGGTGGTTTGGAAAACAACAAAGTATATTAAATAACGTACGGCATATCTTTTAGTTTGATCGAACTCGAAACGTGCAACTGACTGGAGTCTATAAAAAGCGCATTATATTTTGGCTAGATATTTCAGTGGTAGAGAAGAGCAAGAACGGTGGGTTGCTAGCATGCCAACCTCGTCCAAGTCACGGCGGAGCCCTGAGGGGAGCGTCGGGGGCGGGGGCGGGATGG
**************************************************(((((...((((((((.(((((.((.((((((.....((((...((((((..((((((...((...(((...)))..))...))).)))..)))))).......))))..............))))))))..)))))...)).)))))))))))......(((...(((.((........)))))...)))......................((((...(((((.........))))).))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
....................................................GTCAAGAGCTACCGAC.................................................................................................................................................................................................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................AGCCAACCTCGTCCAA............................................... 16 1 2 0.50 1 0 1 0 0 0 0 0 0
..................................................................ACAGATGGAGTGGAACAAATT................................................................................................................................................................................................................................................................. 21 3 5 0.40 2 0 0 1 1 0 0 0 0
...............................................................................................................................................................................................................................TATATTTAGGCTAGAGATTT..................................................................................................... 20 2 6 0.17 1 0 1 0 0 0 0 0 0
...................................................................CAGATGGAGTGGAACAAATT................................................................................................................................................................................................................................................................. 20 3 7 0.14 1 0 0 1 0 0 0 0 0
..................................................................ACCAATGGAGTCGAAAAAAT.................................................................................................................................................................................................................................................................. 20 3 17 0.06 1 0 0 0 0 1 0 0 0
........................................TCGTCGATATCAGTCAAGA............................................................................................................................................................................................................................................................................................. 19 3 17 0.06 1 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................................................................................................................................CGGGGGCGCGGGCGG..... 15 1 20 0.05 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................TAGCGCTGAGGGGTGCGT.................... 18 3 20 0.05 1 1 0 0 0 0 0 0 0
................................................................................................ACACAGTTTGTTATAGAGG..................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1
...................................................................................................................................................................TCTCTTCTAGTTTGTTCGA.................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:11279447-11279790 - dsi_30432 ACGGGCACCATGGCGGATGAGCTGACGCTGTGCACCCA-------------------------------------------------GCAGCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTT-----------ACCTCAGTTTG------TT---------TAAGTGCCCA------------------------TATATGT----CACA--C-----------------------------------------------------------------------------------------------------AATATGTCCCGGTCCCACCAA---------A-CC---TTTTGTTGTT-TCAT-------------ATAA-TTTA-TTGCATGCCG-------------TA-------------------TAGAAAAT---------C-----------------AA--ACTAGCTT-------------GAGCT-TTGCACGTT-GACTGACCT--CAG----ATATTTT---------------------------------------------TCG----------CGTAATA-TAAAACCGATCTATAAAGTCACCATCT----CTT---CTCGTTCTTGCC-ACCCAACGATCGTACGGTTGGAGCAGGTTCAGTGCCGCCTCGGGACTCCCCTCGCAGCCCCCGCCCCCGCCCTACC------
droSec2 scaffold_0:12109799-12110142 - ACGGGCACCATGGCGGATGAGCTGACGCTGTGCACCCA-------------------------------------------------GCAGCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTT-----------ACCTCAGTTTG------TT---------TAAGTGCCCA------------------------TATATGT----CACA--C-----------------------------------------------------------------------------------------------------AATATGTCCCGGTCCCACCAA---------A-CC---TTTTGTTGTT-TCAT-------------ATAA-TTTA-TTGCATGCCG-------------TA-------------------TAGAAAAT---------C-----------------AA--ACTAGCTC-------------GAGCT-TTGCACGTT-GACTGACCT--CAG----ATATTTT---------------------------------------------TCG----------CGTAATA-TAAAACCGATCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACCCAACGATCGTACGGTTGGAGCAGGTTCAGTGCCGCCTCGGGACTCCCCTCGCAGCCCCCGCACCCGCCCTATC------
dm3 chr3R:9906136-9906482 + ACGGGCACAATGGCGGATGAGCTGACGCTGTGCAACCA-------------------------------------------------GCAGCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTT-----------ACCTCAGTTTG------TT---------TAAATGCCCA------------------------TATATGT----CACA--C-----------------------------------------------------------------------------------------------------AATATGTCCCGGTTCCACCCA---------A-CC---TTTTGTTGTT-TCAT-------------ATAA-TTTA-TTGCATGCCG-------------AA-------------------TGGAAAAT---------C-----------------AA--AATAGCTT-------------GAGCT-TTGCACGTT-GACTGAACT--CAG----ATATT----------------------------------TTTTT--------TCG----------CTTGTTA-TAAAACCGATCTATAAAGTCAACTTCT----CTT---CTCGTTTTTGCC-ACCCAACGATCGTACGGTTGGAGCAGGTTCAGTGCCGCCTCGGGACTTCCCTCTCAGCCCCCGCCCCCGCCCTATC------
droEre2 scaffold_4770:9446726-9447052 + ACGGGCACCATGGCGGATGAGCTGACGCTGTGCCCCCA----------------------------------------------------GCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTT------GTTTGAGCTCAGTTTG------TT---------TAAGTGCCCG------------------------TATATGT----CACA--C-----------------------------------------------------------------------------------------------------AAC---TCCCGGTCCTACCAA---------G-CC---TTTTGTTGTT-CACT-------------ATAA-TTTA-TTGCATGCCG-------------AA-------------------TGGAGCAC---------C-----------------AA--ACTAACCT-------------GACC------------------CCT--CGG----ATCATTT---------------------------------------------TCG----------CCTGTTA-TAAAACCGATCTATAAAGTCACCTTCT----CTT---TTCGTTCTTGCC-ACCCAACGATCGTACGGTTGGAGCAGGTTCAGCGCCGCCTCGGGACTCCCCTCGCAGCCCCCGCCCCCGCCCTACC------
droYak3 3R:16525233-16525599 - dya_1055 ACGTGCTCTGTAGCGGATGAGCTGACGCTGTGCACCCA----------------------------------------------GCAGCAGCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTT-----------ACCTCAGTTTGTTTAAGTT---------TAAGTGTCCA--T--ATATA------------TACATATGT----CACA--C-----------------------------------------------------------------------------------------------------AAC---TCCCGGTCCTACTAA---------GACT---TTTTGTTGTT-TACT-------------ATCA-TTTA-TTGCATGCATG------------AATAGAAAAACCAAAACC-----------------AAA-----ACCAAAA--CC--A-AAACAAGCTT-------------GAGCT-GTGCACGTT-TCCC--CCT---TG----AT-----------------------------GTG------------------------------------TG-TAAAACCGATCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACCCAACGATCGTACGGTTGGAGCAGGTTCAGTGCCGCCTCGGGCCTCCCCTCGCAGCCCCCGCCCCCGCCCTACC------
droEug1 scf7180000409802:34905-35250 - ACGGGTTCAATAGCGGATGAGCTGACGCTGTGCACCCA-------------------------------------------------GCAGCAGCAAGGGTCAGTTCTCTC--------------GATGGCTGTTT-----------ATTTCATTT---------ATGTTTT---GAATTACCCA--A--A---------------TGATAGATGT----CATC--CCCT---------------------------------------------------------------------------------------------------------------------CA---------G-CCTTTTTATGTTGTT-TAAT-------------ATAA-TTTG-TTGCATGCATGA-------------------------------------AAT---------CAAAAACGAAAATAC-CT--TAACTTGCTT-------------GAGCT-TTGCATGTT-TGATAATCT--CG-----AT----------------GGT------CA---TGT-----------------------------------CC-TAGAACAGATCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACCCAACGATCGTACGGCTGGAGTAGATTCAGTGCCGCTTCGGGTATACCCACGCAGCCCCCGCCCCCGCCTTATC------
droBia1 scf7180000302402:2694434-2694771 + ACGGGTTCCATAGCGGACGAGCTGACGCTGTGCACCCA----------------------------------------------GCAGCAGCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTA-----------ACCTCAGTTT---------------------------------------------------ATATATGT----CACA--CCCC--------------------------------------------------------------------------------------------------------CAC---------CAACAAGTCCAAGCCA---TTATGTTGTT-TAAT-------------ATTA-TTTC-TTGCATGCTAAAAAACC-----------------------------------------AAA-----GTGAAAA--A-CC--TAACTAGCTT-------------GAGCT-TTGCATGTT-CGATGA----------------T-----TT--GGAGTGT------CA----GTGCT--------------------------------TG-AGCAACAGATCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACCCAACGATCGTACGGCTGGAGCAGGTTCAGCGCCGCCTCGGGCCTCCCCTCGCAGCCCCCGCCCCCGCCCTACC------
droTak1 scf7180000415380:797948-798293 + ACGGGCTCGATAGCGGACGAGCTGACGCTGTGCACCCA----------------------------------------------GCAGCAGCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTCT-----------TAT-AATTTG------TT--TTTCGTATACCTGCCCA------------------------TAAATGT----CGAA--GCCC---------------------------------------------------------------------------------------------------------------------CA---------A-CC-TGTTATGTTGTTATAAT-------------ATCA-TTTA-TTGCATGCCGAAAAACG-----------------------------------------AAA-----AAGAATA--A-CC--TAACTAGCTT-------------GAGCT-TTGCATGTTTCGATGA----------------TA----TT--GGATT----------------------GTA--------TCG--------------ATATGAAAGCAGATCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACCCAACGATCGTACGGCTGGAGCAGGTTCAGCGCCGCCTCGGGACTCCCCTCGCAGCCCCCGCCCCCGCCCTACC------
droEle1 scf7180000491047:1253749-1254089 - ACGGGCTCGATTGCGGACGAGCTGACGCTGTGCACCCA-------------------------------------------------GCAGCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTT--------------TCAGTTCG------TT---------TATAT----------------------------ATATATGT----CACT--CCTTG----GA-----AT------------------------------------------------------------------------------------AAC---CCC------------CAAGTCCCAA-CA-----TTATTGTT-TAAT-------------ATAA-TTTA-TTGCATGCTAAAA------------------------------------ATTCGATATAAA-----GTGAA---------------ATCTT-------------GCGCTTTTGCATGTT-TGCTAGCCT--CGG----ATGATA--------------------------TGC------------------------------CGTTATA-TATAACAGATCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACCCAACGATCGTACGGCTGGAGTAGGTTCAGTGCCGCCTCGGGAATCCCCTCGCAGCCCCCGCCACCGCCCTACC------
droRho1 scf7180000771044:16525-16883 + ACGGGCTCGATTGCG-ACGAGCTGACGCTGTGCACCCA----------------------------------------------GCAGCAGCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTT--------------TCAGTTTG------TT---------TATAT------------CTGT----ATATAAGTATATATGT----CACT--CCCCG----G------AG------------------------------------------------------------------------------------AAC---CCT------------CAATTCCAAA-C-----TTTATTATT-GACT-------------ATGA-TTTA-TTGCATGGTAAACA-----------------------------------AAT----CTAAA-----AAGAAAG-------------AGCTA-------------CCGCT-TTGCATGTT-TGCTAACCTTTCGA----AGGA-----------------------CT---TA-------------------------TCCTTCCACGATA-TATAACAGATCTATAAAGTCACCTTCT----CTT---CTCGTTCTCGCC-ACCCAACGATCGTACGGCTGGAGCAGGTTCAGCGCCGCCTCGGGACTCCCCTCGCAGCCCCCGCCCCCGCCCTACC------
droFic1 scf7180000453912:411915-412269 + ACGGGCTCCATGGCGGACGAGCTGACGCTGTGCACCCA-------------------------------------------------GCAGCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTTT-------TT-GGTTCAGTTCG------TC---------TATATGCCACCTTATA-C----TATA-----T--TATATGT----CACC--C-----------------------------------------------------------------------------------------------------AGC---CCC------------CAAGTCAA-G-AT---TTTTGTTGTT-CCAT-------------ATAA-TTTGTTTGCATGCCAAAAAA------------AAAACACAAAAAATATATAGAAAAC---------C-----------------AA--ATTTGCTT-------------GAGCT-TTGCATGTT-TGA-------------------------------------------A--GTGCCCT-----------------------------------TGCAACAGATCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACCAAACGATCGTACGGCTGGAGCAGGTTCAGCGCCGCCTCGGGCCTCCCCTCGCAGCCCCCGCCCCCGCCCTACC------
droKik1 scf7180000302475:1230566-1230906 - ACGGGCTCCATAGCGGACGAGCTGACGCTGTGCACCCAACAGC----------------------------------------AGCAGCAGCAGCAAGGGTCAGTTTACTC--------------GATGGCTGTTTTTG--TT-----TAT-TAATTG------TT--TTTGGTT----TTTACG--T--TTTTGT----GTAA----ATATGTGT----TACC--C-----------------------------------------------------------------------------------------------------AAA-----------------A-----A---C-CA---TTATA--ATA-TTAT-------------ATTATTTTA-CTGCATGAC----------------------------------------------------C-----------------AA-ACTTAGCTA-------------AAGCT-TTGTATGCC-GCCA---------A----TGG----AATTT--GGATTA--------------TATT--------------------------------TG-AAAATCAGATCTATAAAGTCACCTTTT----CTT----TCGTTCTCGCC-ACCCAACGATCGTACGGCTGGAGCAGATTCAGTGCCGCCTCCGGGTTACCCACGCAGCCACCCCCGCCGCCCTATC------
droAna3 scaffold_13340:20569400-20569775 - dan_3196 ACTGGCTCCATGGCGGACGAGCTGACGCTGTGCACCCA----------------------------------------------GCAGCAGCAGCAAGGGTCAGTT--CCC--------------GATGACTGTTTT-------------------TA------TT---------T-----------------GATT---C-----TTATAAATGT----CACGA-CCCCC----A------ATA---ACCTTC--AAAAGAAAAAACAACAAAACA----------------------------------------------------------------------AA---------T-CC-TTTTATGTTGTT-CCATTTACGTTGTAAAAATAA-TTTG-TTGCATGTCC----------------------------------------------------------------------------TCCCTGACACTCCACCAATAGCT-TGGCATGAT-GC----------AGAATT-------ACTCTTGATATGATATGTTGCAGC-------TTCC----------------------------TA-TTAGACAGATCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACCCAACGATCGTACGGCTGGAGCAGGTTCAGTGCCGCCTCGGGCCTCCCCACACAGCCGCCCCCGCCGCCCTACC------
droBip1 scf7180000396413:1833385-1833750 + ACCGGCTCCATAGCGGACGAGCTGACGCTGTGCACCCA-------------------------------------------------GCAGCAGCAAGGGTCAGTT--CCC--------------GATGACTGTTTT------------------TTA------TT---------T-----------------CATT---C-----TTATAAATGT----CACGACCCCCC----A------ATA---ACCTTTGAAAAAG-----------AAACA----------------------------------------------------------------------AA---------T-CC-TTTTATGTTGTT-CAATTTACGTTGTAAACATAA-TTTG-TTGCATGTCC----------------------------------------------------------------------------TCTTTGACACTCCACCAAAAGCT-TGGCATGCT-GC----------AGAATT-------ACTCTTGATATGATATGTGGCAGC-------TTCC----------------------------AA-TCAGACAGATCTATAAAGTCACCTTCT----CTT---CTCTTTCTTGCC-ACCCAACGATCGTACGGCTGGAGCAGGTTCAGCGCCGCCTCGGGCCTCCCCACACAGCCTCCTCCGCCGCCCTACC------
dp5 2:13482316-13482737 - ACGGGCTCCATGGCGGACGAGCTGACGCTGTGCAACCAACAGCAGCAACAGCAACAACAGCAGCAGCAACAACAACAGCAAC-AGCAGCAGCAGCAAGGGTCAGTT--CTC--------------GATGAGTGTTGA-GAGTGT----CT---------------TTCG----TTT-----------------GGTTTACC-----T--TATGTGT----ACCGTCCCATGT----TACCCCACTTCC-------------------CAAACAC----------------------------------------------------------------------ACACA---------C-CC---TTATGTTGTT-CCTTTTGCG---------TTG-ATTG-ATGCATGCCACAACACG-----------------------------------------TAC-----ACGTACA--C-GT--ACATGTGCAT-------------GTGCC-TTGCATGTCTTGCC----A--CAG----TCGA----------------------------------TTCCCA--------TCGGTTATCCGTA-----GA-AAAAACATGTCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACCCAACGATCGTACGGCTGGAGTAGGTTCAGCGCCGCCTCGGGCCTACCATCGCAGCCGCCGCCGCCGCCCTACC------
droPer2 scaffold_0:6966569-6966978 + dpe_421 ACGGGCTCCATGGCGGACGAGCTGACGCTGTGCAACCAACAGCAGCAACAGCAACAACAGCAGCAGCAACAACAA------C-AGCAGCAGCAGCAAGGGTCAGTT--CTC--------------GATGAGTGTTGA-GAGTGT----CT---------------TTCG----TTT-----------------GGTTTACC-----T--TATGTGT----GCCGTCCCATGT----AACCCCACTTCC-------------------CAAACAC----------------------------------------------------------------------ACACA---------C-TC---TTATGTTGTT-CCTTTTGCG---------TTG-ATTG-TTGCATGCCACAACACGTACACGT---------------------------------------------------------ACATGTGCAT-------------GTGCC-TTGCATGTCTTGCC----A--CAG----TCGA----------------------------------TTCCCA--------TCGGTTATCCATA-----GA-AAAAACATGTCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACTCAACGATCGTACGGCTGGAGTAGGTTCAGCGCCGCCTCGGGCCTACCATCGCAGCCGCCGCCGCCGCCCTACC------
droWil2 scf2_1100000004921:2063557-2063966 + GCTGGTTCCATAGCGGATGAGCTGAAATTGCATCCCGA-------------------------------------------TATGTTGCAGCAACAAGGGTCAGTT--TTT--------------TTTTATTTT-----------------------G------------------TTGTGTCCT--------------------------------------TTTCCAAATCGAAA-----ACTTCC---------C--------CCAAAAAAACACTTTCTCGCTATCTCTATACTTCTCTCTCTGTATCTCTCTCTTTATCTCTCACTTTGCCCTTTCTTTGTCTG---------T-CT---TTTGGTTGGT-ATTT-------------TCTT-ATTG-TTGCATGTTTTGATCCG-----------------------------------------AA------------------------------A-------------ATGCT-TTGCATGTG-TGAGATCGT--TGG----TT---------------------------------------GTGTTTTGATTTCGAT--TT----AATGGCA-GAGAACAGGTCTATAAAGTCAATGTTTTCTTATT---CTCATTTTTGCCAACCCAACGATCATACGGCTGGAGTAGGTTCAGTGCTGCCTCGGGTTTACCCACACAACCACCACCACCACCCTATC------
droVir3 scaffold_12822:504358-504669 - dvi_2305 GCCGGCTCCATGGCCGAAGAGCTGAAACTCCAGAGCGA-------------------------------------------CATGTTGCAGCAGCAAGGGTCAGTT--GTG--------------TTTGATTAT-----------------------G------AT---------TGTGTGTCCG--T--GTGTGT----GTGTG----TGTGTGTGTGTGAG-----------------------------------------------------------------------------------------------------------------------CCGC--T---------T-TT---TTTTGTTGTT-CGTTT--------------------------------------------------------------------------------------------------------------CAC-------------AAGCT-TTGCATGCTTTGATATACA--TA-------------------------------------------TTCCTATTTCAATCACTAT--TT-ATATACGATA-TTTAACTGCTCTATAAAGTCAACGTCT----GTT---TCTGTATTTGCA-ACCCAACGATCGTACGGCTGGAGCAGGTTCAGCGCCGCATCTGGCCTGCCGACGCAGCCGC---CGCCGCCCTATC------
droMoj3 scaffold_6540:33176522-33176851 - GCTGGCTCCATGGCGGATGAGCTGAAACTACATACCGA-------------------------------------------TATGTTGCAGCAGCAAGGGTCAGTT--TTAATTTTTATAATTTTCATTGCTGTTTA-------TT-GTTTCA------------------T----GTGTGTGCG--T--GTGTGT----GTGTG----TGTTTGTGTGTGAG-A-C---------------------------------------------------------------------------------------------------------------------TC--T---------C-TC-TCTTATGTTGCC-TCTCTTA---------------------TG---------------------------------------------------------------------------------------A-------------ATGCC-TTGCATGCG-CTCC---------A----TAT----ACTCT--ATATAACATTTTGAG--GTT-------C----------------------------CA-TCGAACTGGTCTATAAAGTCAAAGTTT----GTTT--GTTTCTTTTGCA-ACCCAACGATCGTACGGCTGGAGCAGGTTCAGCGCCGCATCGGGATTGCCCACTCAACC---GCCACCGCCATACC------
droGri2 scaffold_15074:3273911-3274035 + A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTGTTCTATAAAGTCAACATTT----GTTTTTATAATTCTTGCA-ACCCAACGATCGTACGGCTGGAGCAGGTTCAGTGCAGCATCTGGTCTGCCGACGCAGCCACCACCACCATACCAGCAGCAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACGGGCACCATGGCGGATGAGCTGACGCTGTGCACCCA-------------------------------------------------GCAGCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTT-----------ACCTCAGTTTG------TT---------TAAGTGCCCA------------------------TATATGT----CACA--C-----------------------------------------------------------------------------------------------------AATATGTCCCGGTCCCACCAA---------A-CC---TTTTGTTGTT-TCAT-------------ATAA-TTTA-TTGCATGCCG-------------TA-------------------TAGAAAAT---------C-----------------AA--ACTAGCTT-------------GAGCT-TTGCACGTT-GACTGACCT--CAG----ATATTTT---------------------------------------------TCG----------CGTAATA-TAAAACCGATCTATAAAGTCACCATCT----CTT---CTCGTTCTTGCC-ACCCAACGATCGTACGGTTGGAGCAGGTTCAGTGCCGCCTCGGGACTCCCCTCGCAGCCCCCGCCCCCGCCCTACC------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAACGATCGTACGGTTGGAA...........................................................2211.00100000010000000000
..............GGATGAGCTGACGCTGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-ACCCAACGATCGTACGGTTGGA............................................................2311.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC-ACCCAACGATCGTACGGTTGGAGC..........................................................2611.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACGATCGTACGGTTG..............................................................1811.00110000000000000000
...........GGCGGATGAGCTGACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGCCGCCTCGGGACTCCCCT..............................2411.00100000000100000000
.........ATGGCGGATGAGCTGACGCTGTGCACCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCACGTT-GACTGACCG--....................................................................................................................................................................................................................1811.00110000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCTCGGGACTC..................................1511.00100000000001000000
...............GATGAGCTGACGCTGTGCACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
....GCACCATGGCGGATGAGCTGACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
droSec2
ACGGGCACCATGGCGGATGAGCTGACGCTGTGCACCCA-------------------------------------------------GCAGCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTT-----------ACCTCAGTTTG------TT---------TAAGTGCCCA------------------------TATATGT----CACA--C-----------------------------------------------------------------------------------------------------AATATGTCCCGGTCCCACCAA---------A-CC---TTTTGTTGTT-TCAT-------------ATAA-TTTA-TTGCATGCCG-------------TA-------------------TAGAAAAT---------C-----------------AA--ACTAGCTC-------------GAGCT-TTGCACGTT-GACTGACCT--CAG----ATATTTT---------------------------------------------TCG----------CGTAATA-TAAAACCGATCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACCCAACGATCGTACGGTTGGAGCAGGTTCAGTGCCGCCTCGGGACTCCCCTCGCAGCCCCCGCACCCGCCCTATC------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................CACCCA-------------------------------------------------GCAGCAGCAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTT---CTCGTTCTTGCC-ACCCAACG..........................................................................2311.0010010
......ACCATGGCGGATGAGCTGACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
dm3
ACGGGCACAATGGCGGATGAGCTGACGCTGTGCAACCA-------------------------------------------------GCAGCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTT-----------ACCTCAGTTTG------TT---------TAAATGCCCA------------------------TATATGT----CACA--C-----------------------------------------------------------------------------------------------------AATATGTCCCGGTTCCACCCA---------A-CC---TTTTGTTGTT-TCAT-------------ATAA-TTTA-TTGCATGCCG-------------AA-------------------TGGAAAAT---------C-----------------AA--AATAGCTT-------------GAGCT-TTGCACGTT-GACTGAACT--CAG----ATATT----------------------------------TTTTT--------TCG----------CTTGTTA-TAAAACCGATCTATAAAGTCAACTTCT----CTT---CTCGTTTTTGCC-ACCCAACGATCGTACGGTTGGAGCAGGTTCAGTGCCGCCTCGGGACTTCCCTCTCAGCCCCCGCCCCCGCCCTATC------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................TGAGCTGACGCTGTGCAACCA-------------------------------------------------GCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AATGGCGGATGAGCTGACGCTGTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTACGGTTGGAGCAG........................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000001000000000
........AATGGCGGATGAGCTGACGCTGTGCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AATGGCGGATGAGCTGACGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GGCACAATGGCGGATGAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCGTACGGTTGGAGCAG........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....CACAATGGCGGATGAGCTGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................TGAGCTGACGCTGTGCAACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............GATGAGCTGACGCTGTGCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
ACGGGCACAATGGCGGATGAGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.............................GTGCAACCA-------------------------------------------------GCAGCAGCAAGGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACGATCGTACGGTTGGAG...........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................TGAGCTGACGCTGTGCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGCCTCGGGACTTCCCTCTC...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTGCC-ACCCAACGATCGTACGGT................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCGTACGGTTGGAGC..........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........ATGGCGGATGAGCTGACGCTGTGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGGCGGATGAGCTGACGCTGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........AATGGCGGATGAGCTGACGCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGCCTCGGGACTTCCCTCTCAGCCCCCGCCC................3511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GATGAGCTGACGCTGTGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................CAACCA-------------------------------------------------GCAGCAGCAAGGGTCAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GGGCACAATGGCGGATGAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......CAATGGCGGATGAGCTGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCTGACGCTGTGCAACCA-------------------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGATCGTACGGTTGGAGCAGG.......................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAACGATCGTACGGTTGGA............................................................2111.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................GGTCAGTT--CTC--------------GATGGCTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...............GATGAGCTGACGCTGTGCAACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGATCGTACGGTTGGAGCA.........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCGGGACTTCCCTCTCAGC........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCAACGATCGTACGGTTGGAG...........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.CGGGCACAATGGCGGATGAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ATGAGCTGACGCTGTGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGTACGGTTGGAGCAG........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...GGCACAATGGCGGATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATCGTACGGTTGGAGC..........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................ATGAGCTGACGCTGTGCAACCA-------------------------------------------------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GGCACAATGGCGGATGAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCC-ACCCAACGATCGTACGGTTG..............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAACGATCGTACGGTTGGAG...........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GCACAATGGCGGATGAGCTGACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GCACAATGGCGGATGAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......CAATGGCGGATGAGCTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCCGCCTCGGGACTTCCCTCT............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GGGCACAATGGCGGATGAGCTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................TGTGCAACCA-------------------------------------------------GCAGCAGCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GCAACCA-------------------------------------------------GCAGCAGCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACGGGCACCATGGCGGATGAGCTGACGCTGTGCCCCCA----------------------------------------------------GCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTT------GTTTGAGCTCAGTTTG------TT---------TAAGTGCCCG------------------------TATATGT----CACA--C-----------------------------------------------------------------------------------------------------AAC---TCCCGGTCCTACCAA---------G-CC---TTTTGTTGTT-CACT-------------ATAA-TTTA-TTGCATGCCG-------------AA-------------------TGGAGCAC---------C-----------------AA--ACTAACCT-------------GACC------------------CCT--CGG----ATCATTT---------------------------------------------TCG----------CCTGTTA-TAAAACCGATCTATAAAGTCACCTTCT----CTT---TTCGTTCTTGCC-ACCCAACGATCGTACGGTTGGAGCAGGTTCAGCGCCGCCTCGGGACTCCCCTCGCAGCCCCCGCCCCCGCCCTACC------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............CGGATGAGCTGACGCTGTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
...........GGCGGATGAGCTGACGCTGTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
....GCACCATGGCGGATGAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAACGATCGTACGGTTGGAGC..........................................................2311.0011000000
...GGCACCATGGCGGATGAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCGCCTCGGGACTCCCCT..............................2111.0011000000
droYak3
ACGTGCTCTGTAGCGGATGAGCTGACGCTGTGCACCCA----------------------------------------------GCAGCAGCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTT-----------ACCTCAGTTTGTTTAAGTT---------TAAGTGTCCA--T--ATATA------------TACATATGT----CACA--C-----------------------------------------------------------------------------------------------------AAC---TCCCGGTCCTACTAA---------GACT---TTTTGTTGTT-TACT-------------ATCA-TTTA-TTGCATGCATG------------AATAGAAAAACCAAAACC-----------------AAA-----ACCAAAA--CC--A-AAACAAGCTT-------------GAGCT-GTGCACGTT-TCCC--CCT---TG----AT-----------------------------GTG------------------------------------TG-TAAAACCGATCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACCCAACGATCGTACGGTTGGAGCAGGTTCAGTGCCGCCTCGGGCCTCCCCTCGCAGCCCCCGCCCCCGCCCTACC------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................A------------TACATATGT----CACA--C-----------------------------------------------------------------------------------------------------AAC---TCCCGGTCC...................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
...............................................................................................................................................................................................................TACATATGT----CACA--C-----------------------------------------------------------------------------------------------------AAC---TCCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
...................................................................................................................................................................................................................................................................................................................................................GTCCTACTAA---------GACT---TTTTGTTGTT-TACT-------------.................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
...............................................................................................................................................................................................................TACATATGT----CACA--C-----------------------------------------------------------------------------------------------------AAC---TCCC........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.........................CGCTGTGCACCCA----------------------------------------------GCAGCAGCAGCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCC-ACCCAACGATCGTACGGTTGG.............................................................2511.00101000000000
.......CTGTAGCGGATGAGCTGACGCTGTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.......CTGTAGCGGATGAGCTGACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...............GATGAGCTGACGCTGTGCACCCA----------------------------------------------GCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.......CTGTAGCGGATGAGCTGACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..................................................................................................................................................................................................................ATATGT----CACA--C-----------------------------------------------------------------------------------------------------AAC---TCCCGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
......TCTGTAGCGGATGAGCTGACGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.......CTGTAGCGGATGAGCTGACGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCCTCGGGCCTCCCCT..............................2011.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTT-------------GAGCT-GTGCACGTT-TCCC--CCT---TG----A............................................................................................................................................................................................................2811.00100000010000
droEug1
ACGGGTTCAATAGCGGATGAGCTGACGCTGTGCACCCA-------------------------------------------------GCAGCAGCAAGGGTCAGTTCTCTC--------------GATGGCTGTTT-----------ATTTCATTT---------ATGTTTT---GAATTACCCA--A--A---------------TGATAGATGT----CATC--CCCT---------------------------------------------------------------------------------------------------------------------CA---------G-CCTTTTTATGTTGTT-TAAT-------------ATAA-TTTG-TTGCATGCATGA-------------------------------------AAT---------CAAAAACGAAAATAC-CT--TAACTTGCTT-------------GAGCT-TTGCATGTT-TGATAATCT--CG-----AT----------------GGT------CA---TGT-----------------------------------CC-TAGAACAGATCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACCCAACGATCGTACGGCTGGAGTAGATTCAGTGCCGCTTCGGGTATACCCACGCAGCCCCCGCCCCCGCCTTATC------SizeHit CountTotal NormTotal
No Reads
droBia1
ACGGGTTCCATAGCGGACGAGCTGACGCTGTGCACCCA----------------------------------------------GCAGCAGCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTA-----------ACCTCAGTTT---------------------------------------------------ATATATGT----CACA--CCCC--------------------------------------------------------------------------------------------------------CAC---------CAACAAGTCCAAGCCA---TTATGTTGTT-TAAT-------------ATTA-TTTC-TTGCATGCTAAAAAACC-----------------------------------------AAA-----GTGAAAA--A-CC--TAACTAGCTT-------------GAGCT-TTGCATGTT-CGATGA----------------T-----TT--GGAGTGT------CA----GTGCT--------------------------------TG-AGCAACAGATCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACCCAACGATCGTACGGCTGGAGCAGGTTCAGCGCCGCCTCGGGCCTCCCCTCGCAGCCCCCGCCCCCGCCCTACC------SizeHit CountTotal NormTotal
No Reads
droTak1
ACGGGCTCGATAGCGGACGAGCTGACGCTGTGCACCCA----------------------------------------------GCAGCAGCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTCT-----------TAT-AATTTG------TT--TTTCGTATACCTGCCCA------------------------TAAATGT----CGAA--GCCC---------------------------------------------------------------------------------------------------------------------CA---------A-CC-TGTTATGTTGTTATAAT-------------ATCA-TTTA-TTGCATGCCGAAAAACG-----------------------------------------AAA-----AAGAATA--A-CC--TAACTAGCTT-------------GAGCT-TTGCATGTTTCGATGA----------------TA----TT--GGATT----------------------GTA--------TCG--------------ATATGAAAGCAGATCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACCCAACGATCGTACGGCTGGAGCAGGTTCAGCGCCGCCTCGGGACTCCCCTCGCAGCCCCCGCCCCCGCCCTACC------SizeHit CountTotal NormTotal
No Reads
droEle1
ACGGGCTCGATTGCGGACGAGCTGACGCTGTGCACCCA-------------------------------------------------GCAGCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTT--------------TCAGTTCG------TT---------TATAT----------------------------ATATATGT----CACT--CCTTG----GA-----AT------------------------------------------------------------------------------------AAC---CCC------------CAAGTCCCAA-CA-----TTATTGTT-TAAT-------------ATAA-TTTA-TTGCATGCTAAAA------------------------------------ATTCGATATAAA-----GTGAA---------------ATCTT-------------GCGCTTTTGCATGTT-TGCTAGCCT--CGG----ATGATA--------------------------TGC------------------------------CGTTATA-TATAACAGATCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACCCAACGATCGTACGGCTGGAGTAGGTTCAGTGCCGCCTCGGGAATCCCCTCGCAGCCCCCGCCACCGCCCTACC------SizeHit CountTotal NormTotal
No Reads
droRho1
ACGGGCTCGATTGCG-ACGAGCTGACGCTGTGCACCCA----------------------------------------------GCAGCAGCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTT--------------TCAGTTTG------TT---------TATAT------------CTGT----ATATAAGTATATATGT----CACT--CCCCG----G------AG------------------------------------------------------------------------------------AAC---CCT------------CAATTCCAAA-C-----TTTATTATT-GACT-------------ATGA-TTTA-TTGCATGGTAAACA-----------------------------------AAT----CTAAA-----AAGAAAG-------------AGCTA-------------CCGCT-TTGCATGTT-TGCTAACCTTTCGA----AGGA-----------------------CT---TA-------------------------TCCTTCCACGATA-TATAACAGATCTATAAAGTCACCTTCT----CTT---CTCGTTCTCGCC-ACCCAACGATCGTACGGCTGGAGCAGGTTCAGCGCCGCCTCGGGACTCCCCTCGCAGCCCCCGCCCCCGCCCTACC------SizeHit CountTotal NormTotal
No Reads
droFic1
ACGGGCTCCATGGCGGACGAGCTGACGCTGTGCACCCA-------------------------------------------------GCAGCAGCAAGGGTCAGTT--CTC--------------GATGGCTGTTTT-------TT-GGTTCAGTTCG------TC---------TATATGCCACCTTATA-C----TATA-----T--TATATGT----CACC--C-----------------------------------------------------------------------------------------------------AGC---CCC------------CAAGTCAA-G-AT---TTTTGTTGTT-CCAT-------------ATAA-TTTGTTTGCATGCCAAAAAA------------AAAACACAAAAAATATATAGAAAAC---------C-----------------AA--ATTTGCTT-------------GAGCT-TTGCATGTT-TGA-------------------------------------------A--GTGCCCT-----------------------------------TGCAACAGATCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACCAAACGATCGTACGGCTGGAGCAGGTTCAGCGCCGCCTCGGGCCTCCCCTCGCAGCCCCCGCCCCCGCCCTACC------SizeHit CountTotal NormTotal
No Reads
droKik1
ACGGGCTCCATAGCGGACGAGCTGACGCTGTGCACCCAACAGC----------------------------------------AGCAGCAGCAGCAAGGGTCAGTTTACTC--------------GATGGCTGTTTTTG--TT-----TAT-TAATTG------TT--TTTGGTT----TTTACG--T--TTTTGT----GTAA----ATATGTGT----TACC--C-----------------------------------------------------------------------------------------------------AAA-----------------A-----A---C-CA---TTATA--ATA-TTAT-------------ATTATTTTA-CTGCATGAC----------------------------------------------------C-----------------AA-ACTTAGCTA-------------AAGCT-TTGTATGCC-GCCA---------A----TGG----AATTT--GGATTA--------------TATT--------------------------------TG-AAAATCAGATCTATAAAGTCACCTTTT----CTT----TCGTTCTCGCC-ACCCAACGATCGTACGGCTGGAGCAGATTCAGTGCCGCCTCCGGGTTACCCACGCAGCCACCCCCGCCGCCCTATC------SizeHit CountTotal NormTotal
No Reads
droAna3
ACTGGCTCCATGGCGGACGAGCTGACGCTGTGCACCCA----------------------------------------------GCAGCAGCAGCAAGGGTCAGTT--CCC--------------GATGACTGTTTT-------------------TA------TT---------T-----------------GATT---C-----TTATAAATGT----CACGA-CCCCC----A------ATA---ACCTTC--AAAAGAAAAAACAACAAAACA----------------------------------------------------------------------AA---------T-CC-TTTTATGTTGTT-CCATTTACGTTGTAAAAATAA-TTTG-TTGCATGTCC----------------------------------------------------------------------------TCCCTGACACTCCACCAATAGCT-TGGCATGAT-GC----------AGAATT-------ACTCTTGATATGATATGTTGCAGC-------TTCC----------------------------TA-TTAGACAGATCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACCCAACGATCGTACGGCTGGAGCAGGTTCAGTGCCGCCTCGGGCCTCCCCACACAGCCGCCCCCGCCGCCCTACC------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTTGCAGC-------TTCC----------------------------TA-TTAGACA.............................................................................................................................2511.001010000
....GCTCCATGGCGGACGAGCTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGCCGCCCCCGCCGCCCTACC------2411.001100000
droBip1
ACCGGCTCCATAGCGGACGAGCTGACGCTGTGCACCCA-------------------------------------------------GCAGCAGCAAGGGTCAGTT--CCC--------------GATGACTGTTTT------------------TTA------TT---------T-----------------CATT---C-----TTATAAATGT----CACGACCCCCC----A------ATA---ACCTTTGAAAAAG-----------AAACA----------------------------------------------------------------------AA---------T-CC-TTTTATGTTGTT-CAATTTACGTTGTAAACATAA-TTTG-TTGCATGTCC----------------------------------------------------------------------------TCTTTGACACTCCACCAAAAGCT-TGGCATGCT-GC----------AGAATT-------ACTCTTGATATGATATGTGGCAGC-------TTCC----------------------------AA-TCAGACAGATCTATAAAGTCACCTTCT----CTT---CTCTTTCTTGCC-ACCCAACGATCGTACGGCTGGAGCAGGTTCAGCGCCGCCTCGGGCCTCCCCACACAGCCTCCTCCGCCGCCCTACC------SizeHit CountTotal NormTotal
No Reads
dp5
ACGGGCTCCATGGCGGACGAGCTGACGCTGTGCAACCAACAGCAGCAACAGCAACAACAGCAGCAGCAACAACAACAGCAAC-AGCAGCAGCAGCAAGGGTCAGTT--CTC--------------GATGAGTGTTGA-GAGTGT----CT---------------TTCG----TTT-----------------GGTTTACC-----T--TATGTGT----ACCGTCCCATGT----TACCCCACTTCC-------------------CAAACAC----------------------------------------------------------------------ACACA---------C-CC---TTATGTTGTT-CCTTTTGCG---------TTG-ATTG-ATGCATGCCACAACACG-----------------------------------------TAC-----ACGTACA--C-GT--ACATGTGCAT-------------GTGCC-TTGCATGTCTTGCC----A--CAG----TCGA----------------------------------TTCCCA--------TCGGTTATCCGTA-----GA-AAAAACATGTCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACCCAACGATCGTACGGCTGGAGTAGGTTCAGCGCCGCCTCGGGCCTACCATCGCAGCCGCCGCCGCCGCCCTACC------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........ATGGCGGACGAGCTGACGCTGTGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020101000000
....GCTCCATGGCGGACGAGCTGACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
........CATGGCGGACGAGCTGACGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCATCGCAGCCGCCGCC.................2011.0010010000000
.......................................................................ACAACAGCAAC-AGCAGCAGCAGCAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000001
..................................................................CAACAACAACAGCAAC-AGCAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26110.0910000100000
...................................CCAACAGCAGCAACAGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.0710000010000
..................................................................CAACAACAACAGCAAC-AGCAGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24150.0710100000000
.....................................AACAGCAGCAACAGCAACAACAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25170.0610000100000
.........................................GCAGCAACAGCAACAACAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000100000
.......................................................AACAGCAGCAGCAACAACAACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510010000000
................................................CAGCAACAACAGCAGCAGCAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510010000000
..........................................................................ACAGCAAC-AGCAGCAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
...........................................AGCAACAGCAACAACAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100000
......................................................................AACAACAGCAAC-AGCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.......................................................................ACAACAGCAAC-AGCAGCAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000100000
..................................................GCAACAACAGCAGCAGCAACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000100000
................................................................AGCAACAACAACAGCAAC-AGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
......................................................................AACAACAGCAAC-AGCAGCAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510100000000
.........................................................................AACAGCAAC-AGCAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010000
droPer2
ACGGGCTCCATGGCGGACGAGCTGACGCTGTGCAACCAACAGCAGCAACAGCAACAACAGCAGCAGCAACAACAA------C-AGCAGCAGCAGCAAGGGTCAGTT--CTC--------------GATGAGTGTTGA-GAGTGT----CT---------------TTCG----TTT-----------------GGTTTACC-----T--TATGTGT----GCCGTCCCATGT----AACCCCACTTCC-------------------CAAACAC----------------------------------------------------------------------ACACA---------C-TC---TTATGTTGTT-CCTTTTGCG---------TTG-ATTG-TTGCATGCCACAACACGTACACGT---------------------------------------------------------ACATGTGCAT-------------GTGCC-TTGCATGTCTTGCC----A--CAG----TCGA----------------------------------TTCCCA--------TCGGTTATCCATA-----GA-AAAAACATGTCTATAAAGTCACCTTCT----CTT---CTCGTTCTTGCC-ACTCAACGATCGTACGGCTGGAGTAGGTTCAGCGCCGCCTCGGGCCTACCATCGCAGCCGCCGCCGCCGCCCTACC------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGCGCCGCCTCGGGC.....................................1911.001010000
.......CCATGGCGGACGAGCTGACGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..GGGCTCCATGGCGGACGAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.....CTCCATGGCGGACGAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.002200000
..............................................................................................................................................................................................................T--TATGTGT----GCCGTCCCATGT----AACCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
.................................AACCAACAGCAGCAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501001000
.............................................................AGCAGCAACAACAA------C-AGCAGCAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28190.051001000
................................................................AGCAACAACAA------C-AGCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000
............................................GCAACAGCAACAACAGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
.........................................................CAGCAGCAGCAACAACAA------C-AGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051001000
....................................................AACAACAGCAGCAGCAACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000
...................................................................AACAACAA------C-AGCAGCAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000100
..................................................GCAACAACAGCAGCAGCAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000
droWil2
GCTGGTTCCATAGCGGATGAGCTGAAATTGCATCCCGA-------------------------------------------TATGTTGCAGCAACAAGGGTCAGTT--TTT--------------TTTTATTTT-----------------------G------------------TTGTGTCCT--------------------------------------TTTCCAAATCGAAA-----ACTTCC---------C--------CCAAAAAAACACTTTCTCGCTATCTCTATACTTCTCTCTCTGTATCTCTCTCTTTATCTCTCACTTTGCCCTTTCTTTGTCTG---------T-CT---TTTGGTTGGT-ATTT-------------TCTT-ATTG-TTGCATGTTTTGATCCG-----------------------------------------AA------------------------------A-------------ATGCT-TTGCATGTG-TGAGATCGT--TGG----TT---------------------------------------GTGTTTTGATTTCGAT--TT----AATGGCA-GAGAACAGGTCTATAAAGTCAATGTTTTCTTATT---CTCATTTTTGCCAACCCAACGATCATACGGCTGGAGTAGGTTCAGTGCTGCCTCGGGTTTACCCACACAACCACCACCACCACCCTATC------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...GGTTCCATAGCGGATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
...GGTTCCATAGCGGATGAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT--TT----AATGGCA-GAGAACAGGTCT........................................................................................................................2411.00100100
.................TGAGCTGAAATTGCATCCCGA-------------------------------------------TATGTTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
......TCCATAGCGGATGAGCTGAAATTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
.CTGGTTCCATAGCGGATGAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
....................................GA-------------------------------------------TATGTTGCAGCAACAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
droVir3
GCCGGCTCCATGGCCGAAGAGCTGAAACTCCAGAGCGA-------------------------------------------CATGTTGCAGCAGCAAGGGTCAGTT--GTG--------------TTTGATTAT-----------------------G------AT---------TGTGTGTCCG--T--GTGTGT----GTGTG----TGTGTGTGTGTGAG-----------------------------------------------------------------------------------------------------------------------CCGC--T---------T-TT---TTTTGTTGTT-CGTTT--------------------------------------------------------------------------------------------------------------CAC-------------AAGCT-TTGCATGCTTTGATATACA--TA-------------------------------------------TTCCTATTTCAATCACTAT--TT-ATATACGATA-TTTAACTGCTCTATAAAGTCAACGTCT----GTT---TCTGTATTTGCA-ACCCAACGATCGTACGGCTGGAGCAGGTTCAGCGCCGCATCTGGCCTGCCGACGCAGCCGC---CGCCGCCCTATC------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGGCCTGCCGACGCAGCCGC---CGCC..............2811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA-ACCCAACGATCGTACGGCTGGAG...........................................................2611.001000000000000000000000000000000000000000000000000000000000000010
.......................GAAACTCCAGAGCGA-------------------------------------------CATGTTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGGCCTGCCGACGCAGCC.......................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGTACGGCTGGAGCAG........................................................1911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA-ACCCAACGATCGTACGGCTGG.............................................................2411.001000000000000000000000000000000000000001000000000000000000000000
.......................GAAACTCCAGAGCGA-------------------------------------------CATGTTGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
..........................ACTCCAGAGCGA-------------------------------------------CATGTTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGGCCTGCCGACGC...........................1811.001000000000000000000000000000001000000000000000000000000000000000
..................GAGCTGAAACTCCAGAGCGA-------------------------------------------CAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
...........GGCCGAAGAGCTGAAACTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000100000000000000000000000000000000000000000000000000
................................................................................................................................................................................GTGTGTCCG--T--GTGTGT----GTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000001000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TGTGTGTCCG--T--GTGTGT----GTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000010
droMoj3
GCTGGCTCCATGGCGGATGAGCTGAAACTACATACCGA-------------------------------------------TATGTTGCAGCAGCAAGGGTCAGTT--TTAATTTTTATAATTTTCATTGCTGTTTA-------TT-GTTTCA------------------T----GTGTGTGCG--T--GTGTGT----GTGTG----TGTTTGTGTGTGAG-A-C---------------------------------------------------------------------------------------------------------------------TC--T---------C-TC-TCTTATGTTGCC-TCTCTTA---------------------TG---------------------------------------------------------------------------------------A-------------ATGCC-TTGCATGCG-CTCC---------A----TAT----ACTCT--ATATAACATTTTGAG--GTT-------C----------------------------CA-TCGAACTGGTCTATAAAGTCAAAGTTT----GTTT--GTTTCTTTTGCA-ACCCAACGATCGTACGGCTGGAGCAGGTTCAGCGCCGCATCGGGATTGCCCACTCAACC---GCCACCGCCATACC------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..TGGCTCCATGGCGGATGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...GGCTCCATGGCGGATGAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACGATCGTACGGCTGGAG...........................................................2111.001000001
.........................AACTACATACCGA-------------------------------------------TATGTTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGCGCCGCATCGGGATTGCC................................2411.001001000
.....................................................................................................................................................................................TGCG--T--GTGTGT----GTGTG----TGTTTGTGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26130.081100000
droGri2
A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTGTTCTATAAAGTCAACATTT----GTTTTTATAATTCTTGCA-ACCCAACGATCGTACGGCTGGAGCAGGTTCAGTGCAGCATCTGGTCTGCCGACGCAGCCACCACCACCATACCAGCAGCAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 09:23 AM