ID:

dsi_30429

 Coordinate:

2l:13481103-13481252 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.4 -17.2 -16.9 -16.7

Flybase annnotation

intergenic

No Repeatable elements found

mature
star
  1. dsi_30429  2l:13481211-13481225 -
  2. node_55064:1614-1628 -
  3. node_4791:4526-4540 +

Sense Strand Reads

AGTTGAAACAAAAACAATACAATAACAACAATAAAGTACGCTTTTTTATTTCGAAAACAATTCGTCAGCAAAAAAAAAACAAGAGTCAAGAAACAGCTGGAAAATTCAAGCATCTAGTGGGTGTTTACTGTAGCTCCTCAGTTGGCAGCTGTGTTTCTCAGAATTCTCATATGATATGATTGGTAATTTGTATGTTTCAGTACCTCGAACTATGGAGGTTACACTCAGCTCGGGCGGATCATCGAACGCC
*****************************************************************************.((............(((((((..............((((((((.(((......))).)).)).)))))))))))))************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M025
embryo
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR618934
dsim w501 ovaries
 M024
male body
........................................................................................................................................................................................................................GGTTACACTCAGCTCGGGC............... 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GGTTACACTCAGCTCGGGCGGAT........... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TGGAGGTTACACTCAGCTCGGGCGGA............ 26 0 1 2.00 2 0 0 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................GTGACATTCAGCTCGGGCGGATCATC....... 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GGAGGTTACACTCAGCTCGGGCGGATC.......... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TACACTCAGCTCGGGCGGATCATCGAT.... 27 1 1 1.00 1 0 0 0 0 0 1 0 0 0
........................................................................................................TTCAAGCATCTAGAGGGTCGT............................................................................................................................. 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TGGAGGTTACACTCAGCTCGGGCGGT............ 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................TCCTCAGTTGGCAGCTGTGT................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................................TCGGGCGGATCATCGAACGC. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TACACTCAGCTCGGGCGGATCATCGAA.... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................AGGTTACACTCAGCTCGGGC............... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................TGTTTACCGTAGTTCCTCTGTT........................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................TACCCTCAGCACGGTCGGA............ 19 3 6 0.33 2 0 0 0 2 0 0 0 0 0
.............................................................................AACAAGAGTCAAGAA.............................................................................................................................................................. 15 0 3 0.33 1 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................................................TACCCTCAGCACGGTCGG............. 18 3 20 0.20 4 0 0 0 4 0 0 0 0 0
....................................................................................................................GTGGAGCTTTACTGTAGCT................................................................................................................... 19 3 20 0.15 3 1 0 0 0 0 0 0 0 2
...............................................................GTCAGCAAAAAAAAAA........................................................................................................................................................................... 16 0 9 0.11 1 0 0 0 0 1 0 0 0 0
.....................................................................................................................TGGATCTTTACTGTAGC.................................................................................................................... 17 2 11 0.09 1 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................GATTCAGTACCACGAAC........................................ 17 2 18 0.06 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................TAATATGGTATGATTGG................................................................... 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

TCAACTTTGTTTTTGTTATGTTATTGTTGTTATTTCATGCGAAAAAATAAAGCTTTTGTTAAGCAGTCGTTTTTTTTTTGTTCTCAGTTCTTTGTCGACCTTTTAAGTTCGTAGATCACCCACAAATGACATCGAGGAGTCAACCGTCGACACAAAGAGTCTTAAGAGTATACTATACTAACCATTAAACATACAAAGTCATGGAGCTTGATACCTCCAATGTGAGTCGAGCCCGCCTAGTAGCTTGCGG
************************************************************************************************.((............(((((((..............((((((((.(((......))).)).)).)))))))))))))***************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 M023
head
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR902009
testis
..........................................................................................................................................GTCCACCGTCGGCACAAAGAAT.......................................................................................... 22 3 1 2.00 2 2 0 0 0 0 0
.......................................................................................................................................................................................ATTAAACATACAAAGTCA................................................. 18 0 1 1.00 1 0 0 1 0 0 0
...................................................................................................................................TCGAGGAGTCAACTGACGA.................................................................................................... 19 2 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................................................................AGTCGCGCCCGGCTAGTA........ 18 2 2 0.50 1 0 0 0 1 0 0
.......GGTTTTTGTTATGTTATTGTTA............................................................................................................................................................................................................................. 22 2 4 0.25 1 0 0 0 0 0 1
....................................................................................................................................................................AGAGAAGACTATACTAAC.................................................................... 18 2 7 0.14 1 1 0 0 0 0 0
................................TTTCATGCGAAGAAA........................................................................................................................................................................................................... 15 1 12 0.08 1 0 0 0 0 1 0
.....................................................................................................................................................................................................GTCATGGAGCTTGCTCACT.................................. 19 3 13 0.08 1 0 0 0 0 1 0
.................................TTCATGCGAAGAAAT.......................................................................................................................................................................................................... 15 1 15 0.07 1 0 0 0 0 1 0
.........................................................................................................................................................................................................................................CGCCTAGTAGCTTCGGG 17 2 16 0.06 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:13481053-13481302 - dsi_30429 AGTTG--AAA------CAAAAACAATAC--------AATAACAACA------------------A--TAA---AGTACGCT-TTTTT-ATTT-CG---AAAACAATTCGTCAGCA---AAAAA---AA---AAC---------------------------------------AA---------GA-GT--CAAGAAACAGCTGGAAAATT-CAA---GCAT--C---TA----------GTGGGTGTTTA----------------------CTGTAGC------------------TCCT----------CAG-----TTGGCAGCTGTGTTT----------C-------------------------------------------T---------------------------------------------CAGAATTCTCA---------------------------TA------------------------TGATAT-----GATTGG-----------------TAA--------------------TTTGTAT-------GTTT-----CAGTACCTCG------AACTATGGAGGTTACACTCAGCTCGGGCGGATCATCGAACGCC
droSec2 scaffold_3:160837-161082 - AGTTG--AAA------CAAAAACAATAC--------AATAACAACA------------------A--TAA---AGTACGCT-TTTTT-ATTT-CG--AA-AAC-ATTCGTCAGCA---AAAAA---A------C------------------------------------A---A---------GA-GT--CAAGAAATAGCTGGAAAACT-CAA---GCAT--C---TA----------GTGGGTGTTTA----------------------CTGTAGC------------------TCCT----------CAG-----TTGGCAGCTGTGTTT----------C-------------------------------------------T---------------------------------------------CAGAATTCTCA---------------------------TA------------------------TGATAT-----GATTGG-----------------TAA--------------------TTTGTAT-------GTTT-----CAGTACCTCG------AACTATGGAGGTTACACTCAGCTCGGGCGGATCATCGAACGCC
dm3 chr2L:13903882-13904139 - AGTTG--AAA------CAAAAACAATAC--------AATAACAACA------------------A--TAA---AGTACGCT-ATTTT-ATTT-CG--AAAAACAATTCGTCAGCA---GAAAA---A------C---------------------------------------GA---------AA-GT--CAAGGAACAGCTGGAACATT-CAA---CTAT--C---TA----------GTGGGTGTTTA----------------------CTGTATC------------------TCCT----------CAG-----TTGGCAGCTGTGTTTACTGTAGCTTT-------------------------------------------T---------------------------------------------CAGAACTCTCA---------------------------TA------------------------TGATAT-----GCTTGG-----------------TAA--------------------TTTGTAT-------GTTT-----CAGTACCTCG------AACAATGGAGGTGACATTCAGCTCGGGCGGATCATCGAACGCC
droEre2 scaffold_4929:11568742-11569018 + AGTTG--AAA------CAAAAACAATAC--------AATAAAAACA------------------A--TAA---AGTAAGAC-ATTTT-ACTT-C---AAAAACAATTCGTCAGCA---AAAAA---A----AA----------T------------------------------A---------TA-AT--CGAGAAACAGCTGGAGCATT-CGA---GCAT--C---TA----------GTTGGTGTTTA----------------------CTGTATC------------------TCCT----------CAG-----TTGTCAGCTGTGTTTACTGTAGCTTCTTAGTTGCCAGTTGTGT-AA-AA--------------------TC------------GA----------------------------------ACTTTCA----------------------------G------------------------TGATAT-----GCTTGT-----------------TAA--------------------CTTTTGT-------GTTT-----CAGTACATCG------AAAAATGGAGGCGACACTTAGCTCGGGCGGATCATCAAACGCC
droYak3 2L:10310288-10310570 - AGTTG--AAA------CAAAAACAATAC--------AATAAAAACC------------------A--TAA---AGTACGAC-ATTTT-ATTT-CG---AAAACAATTCGTCAGCA---AAAAA---A------------------------------------------CC-------------GA-GT--CGAGAAACAGCTGGAGCATT-CGA---GCAT--C---TA----------GTGGGTGTTGA----------------------CTGTATC------------------TGCT----------CAG-----TTGCCAGCTGTGTTTACTGTAGCTTCTCAGTTGCCAGCTGTGT-GG-AA--------------------TC---------------------------------------------AAACTTTTTA---------------------------AG------------------------TGATA------GCTTGGCTACAT----------------TTGTG--------------TTTTGT-------GTTT-----CAGTACCTCA------AAAAATGGAGGCGACACTCAGCTCGGGCGGATCATCGAACGCC
droEug1 scf7180000409452:465176-465470 - AGTTG--AAA------CAAAAACAATA---CAAA-------------------GCCCTCGTACCA--TAA---AGTAAAGA-AATTT-ATTT-CG--AAAAACAATTCGTCAGCA---GAATT---T------T-----------------------------------TTGGGGAATT-C---AG-TT--CGAGAAACAGCTGGACGAATCCGC---CCAT--C---TA----------GTGGGTGTTTACATGCTTT-------TTTTT-----TA----------------------------C-AGCAAAA-----CTGCCAGCTG------------------------------TGT-AA-AA--------------------TC------------AAACTA----------------------C-------ATTTTAG---------------------------TG------------------------TGAAAT-----GATA-A-TACAT----------------ACGTTTCTTGTACTTATACTTGTAT-------ATTT-----CAGCACCCAT------CGAAATGGAGGCGACACTCAGCTCCGGAGGATCATCAAATGCC
droBia1 scf7180000302408:2424298-2424596 + AGTTG--AAAGGAAAACAAAAACAAC--AAC-----AATAACAACA---GGCAGCC---GTGCCA--TAA---AGTCGAGA-AATTT-ATTT-CG--AAAAACAATTCGTCAGCA---AAAAG---T------------------------------------------TGGGGGATCT-C---AG-TT--CCAGAAACAGCTGGAGAATA-CAA---GCAT--C---TA----------GTGGGCGCG-A-----TT--------TCGTCTACT----C------------------TCCC-------CAAGAG-----CTGCCAGCTG------------------------------TGC-GA-AG--------------------TC---------------------------------------------AGAATA--CA---------------------------TT------------------------TCTTGTGGATA-----G------TAATA--TATTTACACATCTCTC-----------TC-----GTAGT--ATCT-----CAGAACCTCT------GGAAATGGAGGCGACACTCAGCTCGGGCGGATCGTCGAATGCC
droTak1 scf7180000415399:1426010-1426270 + AGTGG--AAA------CGAAAACAAC--AACA-----AAAAC---AATACGCAGCC---GTGCAA--TAA---AGTAAAGA-AATTT-ATTT-CG--AAAAACAATTCGTCAGCA---AAAAA---A------C-----------------------------------CAGGGGATTTTG---CG-AT--CGAGAAACAGCTGGAGAATC-TGG---GAAA--C---------------------------------------------------------------------------------C-GACAGAG-----TTGCCAGCTG------------------------------TGT-GA-AA--------------------TCGAGATCAAA--CCGTTT---------------------------------------------------------------------------------------------TTTTGAATA-----G------TAA-ATATTG------------------------TC-----ATAAT--ATTT-----CAGTAACCC-----TTCGAAATGGAGGCGACTCTCAGCTCGGGAGGATCTTCGAATGCC
droEle1 scf7180000491338:1514467-1514737 - AGTTG--AAA------CAAAAACAAA--AACAGA-------------------GCC---GTAAAA--TAA---AGTAAAGA-AATTT-ATTT-CG--AAAAACAATTCGTCAGCA---AAAAA---T------C---------CG------------------------GAGGGG---------AA-TT--CGAGAAACAGCTGGAGGAAT-CGG---GCAT--C---GT----------GTTTTTTTTGT------T-TTTTTGATTGTT-----TATC------------------TCCC--G-C-CTCAGAG-----TTGCCAGCTG------------------------------CGGAAA-AA--------------------A------------CCAGCTG----------------------CGT-----------------------------------------------------------------------GGATA-----T------TAATA--TTGTTAA--------------------CCTTTAT-------TTTG-----CAGTTCCTCT------TGAAATGGAGGCGACACTCAGCTCGGGAGGAT---CGAATACC
droRho1 scf7180000780107:173366-173618 + AGTTA--AAA------CAAAAACAAA---------------------------GCC---GTAAAA--TAA---AGTAAAGA-AATTT-ATTT-CG--AAAAACAATTCGTCAGCA---AAAAA---T------------------------------------------CGGGGG---------AA-TT--CGAGAAACAGCTGGAGGAAT-CGG---GCAT--C---TA----------GTGGGTGTTTT------TT-------TTGTT-----TATC------------------TCG-----C-AGCAGAG-----TTGCCAGCTG------------------------------TGG-AA-AA--------------------A------------CCAGCTG----------------------TGT-----------------------------------------------------------------------GTGTA-----T------TAATA--TTTTTCA--------------------CCTTTAC-------TTTT-----CAGTACCTCT------CGAAATGGAGGCGACACTCAGCTCAGGAGGAT---CAAATGCC
droFic1 scf7180000454082:159384-159667 + AGTTG--AAA------CAAAAACAAA--AACATA-------------------GAC---GTACAA--TAA---AGTAA--C-AATTT-ATTT-GG--AAAAACAATTCGTCAGCA---AAAAT---T------------------------------------------TTG-AG---------AA-TT--CGAGAAACAGCTGGAGGAATCCGG---GCAT--CGTCTA----------GTGGGTGTTTA----------------------CTTTTT-------------------TCCCCAACCGAGCAGAG-----TTGCCAGCTG------------------------------TGC-AA-AA--------------------A------------GCAGCTGCTTCGTGGATACTTATCATTTTTGT--AAACCGT--------------GTGTTT--TACG------------------------------------------------------------TTCA-------------------------------TTTTC-ATCG-----CAGAACCTCT------TGAAATGGAGGCGACACTCAGCTCTGGAGGAT---CGAATGCC
droKik1 scf7180000302236:52518-52771 + AGTTG--GTA-------AAAAACAAA--AACAAA-------------------GCC---GTA-AA--TCG---AGTAAAGA-AATTT-ATTT-CG--AAAAACAATTCGTCAGCG---AAAAG---T------------------------------------------TGG-GG---------AATTT--CGAGAAACAGCTGGAGCATT-CGAAGGGTAT--C---TA----------ATGGGTAAAAA----------------------TTGTGTA----------------------------------------CTGCCAGCGG------------------------------GGC-AG-GA--------------------AC------------GCGCTG----------------------CCTTCGAAACTC------------CTAATATT------------------------------------------------TA------------TA--TTAT-------------------------------TTAT--CTTCCTTGGCAGCATCTAA------CGAAATGGAGACAACACTCAGCTCGGGCGGCT---CCAATGCC
droAna3 scaffold_12916:11875510-11875781 + AGTTGAGAAA------CAAAAACAAA--AAC--------------ACTA----------------------CGAGAAAAGTAAATTT-ATTT-CGAGAAAAACAATTCGTCAGCA---AAAAA---A-----A----------CA------------------------CCGTGC---------AA-GT--CGAGAAACAGCTGGAGAAGT-CGA---GCAT--C---CAGTCGATTCGCGTGGGTGTTG----------------TGGTCCA-----------------------------------CGCGGAG-----TTGCCAGCGT------------------------------CGC-TA-AA---------------------------------CCG-TTGCTG-------------------C---CAGGATTTT-A---------------------------AA------------------------GGAGAT-----ATATAA-----------------TAT--------------------TTTCCGTGTTTC--CTTC-----CAGACGATCT------TGAAATGGAGACCACACTCAGCTCGGGGGGCT---CTAACGCC
droBip1 scf7180000396769:227507-227755 + AGTTGAGAAA------CAAAAACAAA--AAC--------------ACTA----------------------CGAGAAAAGTAAATTT-ATTT-CGAGAAAAACAATTCGTCAGCA---AAAAA---GAAAAAA-----A--AACA------------------------CCGTG----------CA-AT--CGAGAAACAGCTGGAGAAGT-CGA---GCAT--C---GT----------GTGGGTGTTGG---------------TGGTCCA------------------------------------------------------CGA------------------------------GGC-AATAG--------------------AC---------AAGGAGCT-------------------------------------AAAGGAGGTCC------------------A------------------------TAATAT-----TTT--------------------TTG--------------------TT-----GTTTT--CTTC-----CAGAAGATCT------CGTAATGGAGACGACACTCAGCTCTGGGGGCT---CTAACGCC
dp5 4_group4:5797116-5797412 + AGTTG--AAGC-----TAAAAACAAC--AACAAA-------------------GCC---GTACAACGTAAACGTGAACAGA-AATTTCA-TT-TG--AACAACAATTCGTCAGCA---AAAAA---G----AA----------TA------------------------CGGTGG---------AATTT--CGAGAAACAGCTGGAAGACC-AAA---CCACACCACCT------------------------------------------------------------ACATTTGTACGCTCATGCGAGTAGAGTAGTG-------------------------------------------------TTGTAGAGAAATTTTATGTA--------------------TTTTATGGTCACGTCACATGTGCGC--AGAACTC--------------AAAATT--TGCA------------------------------------------------------------TTCC-------------------------------TTTTCTGCCC-----CAGATCTTCGTTCGTCCGATATGGAGGCGACACTTAGCTCGGGCGGCT---CGAATGCC
droPer2 scaffold_16:1112688-1112984 - AGTTG--AAGC-----TAAAAACAAC--AACAAA-------------------GCC---GTACAACGTAAACGTGAAAAGA-AATTTCA-TT-TG--AACAACAATTCGTCAGCA---AAAAA---G----AA----------TA------------------------CGGTGG---------AATTT--CGAGAAACAGCTGGAAGACC-AAA---CCACACCACCT------------------------------------------------------------ACATTTGTACGCTCATGCGAGTATAGTAGTG-------------------------------------------------TTGTAGAGAAATTTTATGTA--------------------TTTTATGGTCACGTCACATGTGCGC--AGAACTC--------------AAAATT--TGCA------------------------------------------------------------TTCC-------------------------------TTTTCTACCC-----CAGATCTTCGTTCGTCCGATATGGAGGCGACACTTAGCTCGGGCGGCT---CGAATGCC
droWil2 scf2_1100000004521:1685351-1685618 + GAATA--ACA-------ACACACAAA--AACAAAGTTATAAAAATAATAAG-----------------CA---AGCT--GCAAATTTCATGTTTA--AACAACAATTCGTCAGCA---AAAAG---TAAA-AATA---AAAAATACCCATACATACATATATATATATTCAGAGA---------CA-TT--CCAGAAACAGCTGGAAAATA-AGT---G------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGGAGAAATGGTTAGTT--------------------AATTTTAATCAT-------------------------------------AAACT--TTTATTCCTT------------------------TC--------------------------------------------------------TTGTAG-------ATTG-----AAATAATT-----GTGCACAATGGAAGCGACTCTCAGCTCGGAAGGCT---CGAATGCC
droVir3 scaffold_12723:869514-869596 - AGTAA--AAA------CAAAAGTAACAC--------CATAAAAACA-T----------------A--TGA---AGCT--GCAAATTT-TTGT-GC--AAATAATATTCGTCAGCA---GCTAAAAAA----AA----------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:10468904-10469228 + AATTT--TACCAAT--AAAAAACAAGAT--------CATAAAA--AATT--------------CA--TGA---AGCT--GCAAATTT-CTGT--G--CAAACAAATTCGTCATCAGCAAAAAG---AAAA-AA-----AAAAACCCCAAGTTG----------------TGG-CGAAAG-ACGTAGCAG--CAAGAAACAGCTGAAAAATT-CTC---AGCG--C---TTG---------TTGCTTTGTTA--------TTGTCGTTTATT-----GATACACCTGCGTATATGTGTGTGTGCGTGCGTGTGTTG-----------------------------------------------------------------------------------------------------G----------------------------G---------------------------TGTGTGCATGTACGTGCGTGCTCATGT-GTAT-----TTTTAT-----------------TTA--------------------TTTCTCT-------ATTT----CCAGTGTCTTACACTTTGACCATGGAGTCAACAATTAGTTCCGGCGGCT---CAAATGCA
droGri2 scaffold_15252:4384283-4384499 - ATTTCGGCAA------CAAAAACATC-----------ATAAAA--A------------------G--TAG---AT----GAAACTTTTTTGTGC---AAACAAAATTCGTCAGCA---TTTAAAAAAA---AACCTGAA--AAC------------------------------A---------TATTTCCAGAGAATCAGCTGCTTGATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------AAAGCTT------------TTTGTAATTATTT---------------------------------TTTT--------------CTT-----------TT----------------------GTGTGTATTTT--TTTC-----CAGTATCTCAAACTTTGACCATGGAGTCAAAACTTAGTTCAGGCGGCT---CAAACGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGTTG--AAA------CAAAAACAATAC--------AATAACAACA------------------A--TAA---AGTACGCT-TTTTT-ATTT-CG---AAAACAATTCGTCAGCA---AAAAA---AA---AAC---------------------------------------AA---------GA-GT--CAAGAAACAGCTGGAAAATT-CAA---GCAT--C---TA----------GTGGGTGTTTA----------------------CTGTAGC------------------TCCT----------CAG-----TTGGCAGCTGTGTTT----------C-------------------------------------------T---------------------------------------------CAGAATTCTCA---------------------------TA------------------------TGATAT-----GATTGG-----------------TAA--------------------TTTGTAT-------GTTT-----CAGTACCTCG------AACTATGGAGGTTACACTCAGCTCGGGCGGATCATCGAACGCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTACACTCAGCTCGGGC...............1912.00200200000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTACACTCAGCTCGGGCGGAT...........2312.00220000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGGTTACACTCAGCTCGGGCGGA............2612.00200000010000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGTTACACTCAGCTCGGGCGGATC..........2711.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACTCAGCTCGGGCGGATCATCGAT....2711.00100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGGTTACACTCAGCTCGGGCGGT............2611.00100000000000010000
..........................................................................................................................................................................................................................................................................................................TCCT----------CAG-----TTGGCAGCTGTGT.................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGCGGATCATCGAACGC.2011.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACTCAGCTCGGGCGGATCATCGAA....2711.00100000000000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTACACTCAGCTCGGGC...............2011.00110000000000000000
...................................................................................................................................AAC---------------------------------------AA---------GA-GT--CAAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1530.33100000000001000000
............................................................................................................GTCAGCA---AAAAA---AA---AA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1690.11100000010000000000
droSec2
AGTTG--AAA------CAAAAACAATAC--------AATAACAACA------------------A--TAA---AGTACGCT-TTTTT-ATTT-CG--AA-AAC-ATTCGTCAGCA---AAAAA---A------C------------------------------------A---A---------GA-GT--CAAGAAATAGCTGGAAAACT-CAA---GCAT--C---TA----------GTGGGTGTTTA----------------------CTGTAGC------------------TCCT----------CAG-----TTGGCAGCTGTGTTT----------C-------------------------------------------T---------------------------------------------CAGAATTCTCA---------------------------TA------------------------TGATAT-----GATTGG-----------------TAA--------------------TTTGTAT-------GTTT-----CAGTACCTCG------AACTATGGAGGTTACACTCAGCTCGGGCGGATCATCGAACGCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGG-----------------TAA--------------------TTTGTAT-------GTTT-----CAG........................................................2211.0010010
...........................................................................................................................................................................................................................................................................................................CCT----------CAG-----TTGGCAGCTGTGTT................................................................................................................................................................................................................................................................................................................2011.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTCGGGCGGATCATCGAACGC.2411.0010010
......................................................................................................................................................................................................................................................................................GC------------------TCCT----------CAG-----TTGGCAGCTGTGTTT----------C-------------------------------------------T---------------------------------------------...........................................................................................................................................................................................................2611.0010010
dm3
AGTTG--AAA------CAAAAACAATAC--------AATAACAACA------------------A--TAA---AGTACGCT-ATTTT-ATTT-CG--AAAAACAATTCGTCAGCA---GAAAA---A------C---------------------------------------GA---------AA-GT--CAAGGAACAGCTGGAACATT-CAA---CTAT--C---TA----------GTGGGTGTTTA----------------------CTGTATC------------------TCCT----------CAG-----TTGGCAGCTGTGTTTACTGTAGCTTT-------------------------------------------T---------------------------------------------CAGAACTCTCA---------------------------TA------------------------TGATAT-----GCTTGG-----------------TAA--------------------TTTGTAT-------GTTT-----CAGTACCTCG------AACAATGGAGGTGACATTCAGCTCGGGCGGATCATCGAACGCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCG------AACAATGGAGGTGACATTCAGC.....................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------TA------------------------TGATAT-----GCTTGG-----------------TAA--------------------TTTGT.............................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGCTCGGGCGGATCATCG......2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGG-----------------TAA--------------------TTTGTAT-------GTTT-----CAG........................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG-----------------TAA--------------------TTTGTAT-------GTTT-----CAG........................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAT-------GTTT-----CAGTACCTCG------A..........................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT-----GCTTGG-----------------TAA--------------------TTTGT.............................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-----GCTTGG-----------------TAA--------------------TTTGTAT-------GTTT-----...........................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGAGGTGACATTCAGC.....................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTCG------AACAATGGAGG................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TT-CAA---CTAT--C---TA----------GTGGGT........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TGTATC------------------TCCT----------CAG-----TTGGCAGC......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT-----GCTTGG-----------------TAA--------------------TTTGTAT-------GTTT-----C..........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATTCAGCTCGGGCG..............1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------AACAATGGAGGTGACATTCAG......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGGTGACATTCAGCT....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT-----GCTTGG-----------------TAA--------------------TTTGTAT-------GTTT-----...........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGACATTCAGCTCGGGCGGATCAT........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................................................................................................AA-GT--CAAGGAACAGCTGGAACATT-CC........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................T--CAAGGAACAGCTGGAACATT-C.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CAG-----TTGGCAGCTGTGTTTACT............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGG-----------------TAA--------------------TTTGTAT-------GTTT-----...........................................................1911.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TT-CAA---CTAT--C---TA----------GTGGGTGT......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................................................................GT--CAAGGAACAGCTGGAACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGCTCGGGCGGATCATCGAACGC.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATGGAGGTGACATTCAGCTCGGGC...............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGCTCGGGCGGATCATCGAAC...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-----GCTTGG-----------------TAA--------------------TTTGTAT-------GTTT-----C..........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AG-----TTGGCAGCTGTGTTTACTGTAGCT......................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GCTTT-------------------------------------------T---------------------------------------------CAGAACTCTCA---------------------------TA------------------------...........................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------TA------------------------TGATAT-----GCTTGG-----------------TAA--------------------TTTG..............................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTCG------AACAATGGAGGT...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGTGACATTCAGCTCGGGCG..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................GTGTTTA----------------------CTGTATC------------------TCCT----------CAG-----TTGGC.........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGACATTCAGCTCGGGC...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................AGGAACAGCTGGAACATT-CAA---....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................GTGGGTGTTTA----------------------CTGTATC------------------....................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................AGCA---GAAAA---A------C---------------------------------------GA---------AA-GT--C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TTT-------------------------------------------T---------------------------------------------CAGAACTCTCA---------------------------TA------------------------TGTC.......................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----GCTTGG-----------------TAA--------------------TTTGTAT-------GTTT-----CAG........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG------AACAATGGAGGTGACAT..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................A------C---------------------------------------GA---------AA-GT--CAAGGAACAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG-----------------TAA--------------------TTTGTAT-------GTTT-----CAG........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................GTATC------------------TCCT----------CAG-----TTGGCAGC......................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCGGGCGGATCATCGAACG..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TGGCAGCTGTGTTTACTGTAGCTTT-------------------------------------------.........................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................A-GT--CAAGGAACAGCTGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................AT--C---TA----------GTGGGTGTTTA----------------------CTGTATC------------------TCCT----------C.....................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................ATT-CAA---CTAT--C---TA----------GTGGGTGT......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TGTAGCTTT-------------------------------------------T---------------------------------------------CAGAACTCTCA---------------------------.....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-----GCTTGG-----------------TAA--------------------TTTGTAT-------GTTT-----CA.........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----GCTTGG-----------------TAA--------------------TTTGTAT-------GTTT-----C..........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................................................................................................................................................................................................C------------------TCCT----------CAG-----TTGGCAGCTGTG..................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGAGGTGACATTCAGCTC...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG-----------------TAA--------------------TTTGTAT-------GTTT-----C..........................................................1911.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................GT--CAAGGAACAGCTGGAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGTTG--AAA------CAAAAACAATAC--------AATAAAAACA------------------A--TAA---AGTAAGAC-ATTTT-ACTT-C---AAAAACAATTCGTCAGCA---AAAAA---A----AA----------T------------------------------A---------TA-AT--CGAGAAACAGCTGGAGCATT-CGA---GCAT--C---TA----------GTTGGTGTTTA----------------------CTGTATC------------------TCCT----------CAG-----TTGTCAGCTGTGTTTACTGTAGCTTCTTAGTTGCCAGTTGTGT-AA-AA--------------------TC------------GA----------------------------------ACTTTCA----------------------------G------------------------TGATAT-----GCTTGT-----------------TAA--------------------CTTTTGT-------GTTT-----CAGTACATCG------AAAAATGGAGGCGACACTTAGCTCGGGCGGATCATCAAACGCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGGCGACACTTAGCTCGG.................2211.0010000100
..................AAAACAATAC--------AATAAAAACA------------------A--TAA---.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG------AAAAATGGAGGCGACACTTAGCTCGG.................2811.0010000100
......................................................................................................CAATTCGTCAGCA---AAAAA---A----AA----------T------------------------------A---------TA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
.............................................................................................................................................................................................................AGCATT-CGA---GCAT--C---TA----------GTTGGTGT......................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGGCGACACTTAGCTCGGGC...............2311.0010100000
...TG--AAA------CAAAAACAATAC--------AATAAAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
................................................................................................................................................................................................................ATT-CGA---GCAT--C---TA----------GTTGGT........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------AAAAATGGAGGCGACACC.........................1920.5010100000
droYak3
AGTTG--AAA------CAAAAACAATAC--------AATAAAAACC------------------A--TAA---AGTACGAC-ATTTT-ATTT-CG---AAAACAATTCGTCAGCA---AAAAA---A------------------------------------------CC-------------GA-GT--CGAGAAACAGCTGGAGCATT-CGA---GCAT--C---TA----------GTGGGTGTTGA----------------------CTGTATC------------------TGCT----------CAG-----TTGCCAGCTGTGTTTACTGTAGCTTCTCAGTTGCCAGCTGTGT-GG-AA--------------------TC---------------------------------------------AAACTTTTTA---------------------------AG------------------------TGATA------GCTTGGCTACAT----------------TTGTG--------------TTTTGT-------GTTT-----CAGTACCTCA------AAAAATGGAGGCGACACTCAGCTCGGGCGGATCATCGAACGCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCGGATCATCGAACGC.1811.00110000000000
.........................................................................................................................AA---A------------------------------------------CC-------------GA-GT--CGAGAAACAGCTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCGACACTCAGCTCGGGCGGATC..........2611.00110000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATGGAGGCGACACTCAGCTCGGGC...............2811.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCGGGCGGATCATCGAACGC.2311.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------AAAAATGGAGGCGACACT.........................1911.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCA------AAAAATGGAGGCGACACTCAGCT....................2711.00100000010000
...........................................................................................................................................................................................................................................................................................................................................GTTTACTGTAGCTTCTCAGT...............................................................................................................................................................................................................................................................................................2011.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCTCGGGCGGATCATCGAACGC.2511.00101000000000
...................................................................................................................................................................................................................................................................................GTATC------------------TGCT----------CAG-----TTGCCAG.......................................................................................................................................................................................................................................................................................................................1911.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGGCGACACTCAGCTCGGG................2311.00100100000000
droEug1
AGTTG--AAA------CAAAAACAATA---CAAA-------------------GCCCTCGTACCA--TAA---AGTAAAGA-AATTT-ATTT-CG--AAAAACAATTCGTCAGCA---GAATT---T------T-----------------------------------TTGGGGAATT-C---AG-TT--CGAGAAACAGCTGGACGAATCCGC---CCAT--C---TA----------GTGGGTGTTTACATGCTTT-------TTTTT-----TA----------------------------C-AGCAAAA-----CTGCCAGCTG------------------------------TGT-AA-AA--------------------TC------------AAACTA----------------------C-------ATTTTAG---------------------------TG------------------------TGAAAT-----GATA-A-TACAT----------------ACGTTTCTTGTACTTATACTTGTAT-------ATTT-----CAGCACCCAT------CGAAATGGAGGCGACACTCAGCTCCGGAGGATCATCAAATGCCSizeHit CountTotal NormTotal
No Reads
droBia1
AGTTG--AAAGGAAAACAAAAACAAC--AAC-----AATAACAACA---GGCAGCC---GTGCCA--TAA---AGTCGAGA-AATTT-ATTT-CG--AAAAACAATTCGTCAGCA---AAAAG---T------------------------------------------TGGGGGATCT-C---AG-TT--CCAGAAACAGCTGGAGAATA-CAA---GCAT--C---TA----------GTGGGCGCG-A-----TT--------TCGTCTACT----C------------------TCCC-------CAAGAG-----CTGCCAGCTG------------------------------TGC-GA-AG--------------------TC---------------------------------------------AGAATA--CA---------------------------TT------------------------TCTTGTGGATA-----G------TAATA--TATTTACACATCTCTC-----------TC-----GTAGT--ATCT-----CAGAACCTCT------GGAAATGGAGGCGACACTCAGCTCGGGCGGATCGTCGAATGCCSizeHit CountTotal NormTotal
No Reads
droTak1
AGTGG--AAA------CGAAAACAAC--AACA-----AAAAC---AATACGCAGCC---GTGCAA--TAA---AGTAAAGA-AATTT-ATTT-CG--AAAAACAATTCGTCAGCA---AAAAA---A------C-----------------------------------CAGGGGATTTTG---CG-AT--CGAGAAACAGCTGGAGAATC-TGG---GAAA--C---------------------------------------------------------------------------------C-GACAGAG-----TTGCCAGCTG------------------------------TGT-GA-AA--------------------TCGAGATCAAA--CCGTTT---------------------------------------------------------------------------------------------TTTTGAATA-----G------TAA-ATATTG------------------------TC-----ATAAT--ATTT-----CAGTAACCC-----TTCGAAATGGAGGCGACTCTCAGCTCGGGAGGATCTTCGAATGCCSizeHit CountTotal NormTotal
No Reads
droEle1
AGTTG--AAA------CAAAAACAAA--AACAGA-------------------GCC---GTAAAA--TAA---AGTAAAGA-AATTT-ATTT-CG--AAAAACAATTCGTCAGCA---AAAAA---T------C---------CG------------------------GAGGGG---------AA-TT--CGAGAAACAGCTGGAGGAAT-CGG---GCAT--C---GT----------GTTTTTTTTGT------T-TTTTTGATTGTT-----TATC------------------TCCC--G-C-CTCAGAG-----TTGCCAGCTG------------------------------CGGAAA-AA--------------------A------------CCAGCTG----------------------CGT-----------------------------------------------------------------------GGATA-----T------TAATA--TTGTTAA--------------------CCTTTAT-------TTTG-----CAGTTCCTCT------TGAAATGGAGGCGACACTCAGCTCGGGAGGAT---CGAATACCSizeHit CountTotal NormTotal
No Reads
droRho1
AGTTA--AAA------CAAAAACAAA---------------------------GCC---GTAAAA--TAA---AGTAAAGA-AATTT-ATTT-CG--AAAAACAATTCGTCAGCA---AAAAA---T------------------------------------------CGGGGG---------AA-TT--CGAGAAACAGCTGGAGGAAT-CGG---GCAT--C---TA----------GTGGGTGTTTT------TT-------TTGTT-----TATC------------------TCG-----C-AGCAGAG-----TTGCCAGCTG------------------------------TGG-AA-AA--------------------A------------CCAGCTG----------------------TGT-----------------------------------------------------------------------GTGTA-----T------TAATA--TTTTTCA--------------------CCTTTAC-------TTTT-----CAGTACCTCT------CGAAATGGAGGCGACACTCAGCTCAGGAGGAT---CAAATGCCSizeHit CountTotal NormTotal
No Reads
droFic1
AGTTG--AAA------CAAAAACAAA--AACATA-------------------GAC---GTACAA--TAA---AGTAA--C-AATTT-ATTT-GG--AAAAACAATTCGTCAGCA---AAAAT---T------------------------------------------TTG-AG---------AA-TT--CGAGAAACAGCTGGAGGAATCCGG---GCAT--CGTCTA----------GTGGGTGTTTA----------------------CTTTTT-------------------TCCCCAACCGAGCAGAG-----TTGCCAGCTG------------------------------TGC-AA-AA--------------------A------------GCAGCTGCTTCGTGGATACTTATCATTTTTGT--AAACCGT--------------GTGTTT--TACG------------------------------------------------------------TTCA-------------------------------TTTTC-ATCG-----CAGAACCTCT------TGAAATGGAGGCGACACTCAGCTCTGGAGGAT---CGAATGCCSizeHit CountTotal NormTotal
No Reads
droKik1
AGTTG--GTA-------AAAAACAAA--AACAAA-------------------GCC---GTA-AA--TCG---AGTAAAGA-AATTT-ATTT-CG--AAAAACAATTCGTCAGCG---AAAAG---T------------------------------------------TGG-GG---------AATTT--CGAGAAACAGCTGGAGCATT-CGAAGGGTAT--C---TA----------ATGGGTAAAAA----------------------TTGTGTA----------------------------------------CTGCCAGCGG------------------------------GGC-AG-GA--------------------AC------------GCGCTG----------------------CCTTCGAAACTC------------CTAATATT------------------------------------------------TA------------TA--TTAT-------------------------------TTAT--CTTCCTTGGCAGCATCTAA------CGAAATGGAGACAACACTCAGCTCGGGCGGCT---CCAATGCCSizeHit CountTotal NormTotal
No Reads
droAna3
AGTTGAGAAA------CAAAAACAAA--AAC--------------ACTA----------------------CGAGAAAAGTAAATTT-ATTT-CGAGAAAAACAATTCGTCAGCA---AAAAA---A-----A----------CA------------------------CCGTGC---------AA-GT--CGAGAAACAGCTGGAGAAGT-CGA---GCAT--C---CAGTCGATTCGCGTGGGTGTTG----------------TGGTCCA-----------------------------------CGCGGAG-----TTGCCAGCGT------------------------------CGC-TA-AA---------------------------------CCG-TTGCTG-------------------C---CAGGATTTT-A---------------------------AA------------------------GGAGAT-----ATATAA-----------------TAT--------------------TTTCCGTGTTTC--CTTC-----CAGACGATCT------TGAAATGGAGACCACACTCAGCTCGGGGGGCT---CTAACGCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................TGCCAGCGT------------------------------CGC-TA-AA---------------------------------CCG-T.......................................................................................................................................................................................................................................2011.001100000
...........................................................................................................................................................................................................................................................................GGTCCA-----------------------------------CGCGGAG-----TTGCCAGC......................................................................................................................................................................................................................................................................................................................2111.001000001
.....................................................................................................................................................................................................................................................TGTTG----------------TGGTCCA-----------------------------------CGCGGAG-----TT............................................................................................................................................................................................................................................................................................................................2111.001000001
...........................................................................................................................................................................................GT--CGAGAAACAGCTGGAGAAGT-CGA---GC..................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
....................................................................................................................................................................................................AACAGCTGGAGAAGT-CGA---GCAT--C---C.........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.....................................................................................................................................................................................................................................................TGTTG----------------TGGTCCA-----------------------------------CGCGGAG-----TTGC..........................................................................................................................................................................................................................................................................................................................2311.001000001
droBip1
AGTTGAGAAA------CAAAAACAAA--AAC--------------ACTA----------------------CGAGAAAAGTAAATTT-ATTT-CGAGAAAAACAATTCGTCAGCA---AAAAA---GAAAAAA-----A--AACA------------------------CCGTG----------CA-AT--CGAGAAACAGCTGGAGAAGT-CGA---GCAT--C---GT----------GTGGGTGTTGG---------------TGGTCCA------------------------------------------------------CGA------------------------------GGC-AATAG--------------------AC---------AAGGAGCT-------------------------------------AAAGGAGGTCC------------------A------------------------TAATAT-----TTT--------------------TTG--------------------TT-----GTTTT--CTTC-----CAGAAGATCT------CGTAATGGAGACGACACTCAGCTCTGGGGGCT---CTAACGCCSizeHit CountTotal NormTotal
No Reads
dp5
AGTTG--AAGC-----TAAAAACAAC--AACAAA-------------------GCC---GTACAACGTAAACGTGAACAGA-AATTTCA-TT-TG--AACAACAATTCGTCAGCA---AAAAA---G----AA----------TA------------------------CGGTGG---------AATTT--CGAGAAACAGCTGGAAGACC-AAA---CCACACCACCT------------------------------------------------------------ACATTTGTACGCTCATGCGAGTAGAGTAGTG-------------------------------------------------TTGTAGAGAAATTTTATGTA--------------------TTTTATGGTCACGTCACATGTGCGC--AGAACTC--------------AAAATT--TGCA------------------------------------------------------------TTCC-------------------------------TTTTCTGCCC-----CAGATCTTCGTTCGTCCGATATGGAGGCGACACTTAGCTCGGGCGGCT---CGAATGCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTTAGCTCGGGCGGCT---C.......2011.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTTAGCTCGGGCGGCT---........1911.0010100000000
..........................................................................GAACAGA-AATTTCA-TT-TG--AACAACAATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGACACTTAGCTCGGGCG..............2011.0010000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGTTCGTCCGATATGGA..................................2011.0010100000000
droPer2
AGTTG--AAGC-----TAAAAACAAC--AACAAA-------------------GCC---GTACAACGTAAACGTGAAAAGA-AATTTCA-TT-TG--AACAACAATTCGTCAGCA---AAAAA---G----AA----------TA------------------------CGGTGG---------AATTT--CGAGAAACAGCTGGAAGACC-AAA---CCACACCACCT------------------------------------------------------------ACATTTGTACGCTCATGCGAGTATAGTAGTG-------------------------------------------------TTGTAGAGAAATTTTATGTA--------------------TTTTATGGTCACGTCACATGTGCGC--AGAACTC--------------AAAATT--TGCA------------------------------------------------------------TTCC-------------------------------TTTTCTACCC-----CAGATCTTCGTTCGTCCGATATGGAGGCGACACTTAGCTCGGGCGGCT---CGAATGCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATATGGAGGCGACACTTAGCTCGGGC...............2813.003300000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGACACTTAGCTCGGGC...............1913.003030000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGAGGCGACACTTAGCTCGGGC...............2612.002200000
.............................................................................................................................................................................GG---------AATTT--CGAGAAACAGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000002
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGCGACACTTAGCTCGGGC...............2211.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTCGTCCGATATGGAGGC...............................2011.001010000
.........................................................................................................................................................................................ATTT--CGAGAAACAGCTGGAAGACC-A.........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..................................................................................................................................................................................................GAAACAGCTGGAAGACC-AAA---CC..................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
........................................................................................................................................................................................................GCTGGAAGACC-AAA---CCACAC..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGACACTTAGCTCGGGC...............1811.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGACACTTAGCTCGGGCGGC............2111.001010000
.......................................................................................................................................................................................................................................................................................................................ATAGTAGTG-------------------------------------------------TTGTAGAGAAATTT...............................................................................................................................................................................................................................................................2311.001000001
..........................................................................................TT-TG--AACAACAATTCGTCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACACTTAGCTCGGGCGGCT---C.......2211.001010000
.....................................................................................TTCA-TT-TG--AACAACAATTCGTCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................................................................................................................................................................................................................................................................................................................GTATAGTAGTG-------------------------------------------------TTGTAGAGA....................................................................................................................................................................................................................................................................2011.001000001
droWil2
GAATA--ACA-------ACACACAAA--AACAAAGTTATAAAAATAATAAG-----------------CA---AGCT--GCAAATTTCATGTTTA--AACAACAATTCGTCAGCA---AAAAG---TAAA-AATA---AAAAATACCCATACATACATATATATATATTCAGAGA---------CA-TT--CCAGAAACAGCTGGAAAATA-AGT---G------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGGAGAAATGGTTAGTT--------------------AATTTTAATCAT-------------------------------------AAACT--TTTATTCCTT------------------------TC--------------------------------------------------------TTGTAG-------ATTG-----AAATAATT-----GTGCACAATGGAAGCGACTCTCAGCTCGGAAGGCT---CGAATGCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAGCGACTCTCAGCTCGGAAGG.............2511.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGACTCTCAGCTCGGAAGGC............2211.00110000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGACTCTCAGCTCGGAAGGC............2311.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCTCAGCTCGGAAGG.............1811.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCGACTCTCAGCTCGGAAGG.............2311.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGAAGCGACTCTCAGCTCGGAA...............2511.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCTCAGCTCGGAAGGC............1911.00100010
..................................................................................................................................................................................................................................................................................................................................................................................GAGGGAGAAATGGTTACC..........................................................................................................................................................................................................................................................18100.10101000
droVir3
AGTAA--AAA------CAAAAGTAACAC--------CATAAAAACA-T----------------A--TGA---AGCT--GCAAATTT-TTGT-GC--AAATAATATTCGTCAGCA---GCTAAAAAA----AA----------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
AATTT--TACCAAT--AAAAAACAAGAT--------CATAAAA--AATT--------------CA--TGA---AGCT--GCAAATTT-CTGT--G--CAAACAAATTCGTCATCAGCAAAAAG---AAAA-AA-----AAAAACCCCAAGTTG----------------TGG-CGAAAG-ACGTAGCAG--CAAGAAACAGCTGAAAAATT-CTC---AGCG--C---TTG---------TTGCTTTGTTA--------TTGTCGTTTATT-----GATACACCTGCGTATATGTGTGTGTGCGTGCGTGTGTTG-----------------------------------------------------------------------------------------------------G----------------------------G---------------------------TGTGTGCATGTACGTGCGTGCTCATGT-GTAT-----TTTTAT-----------------TTA--------------------TTTCTCT-------ATTT----CCAGTGTCTTACACTTTGACCATGGAGTCAACAATTAGTTCCGGCGGCT---CAAATGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCATGGAGTCAACAATTAGTTCCGGCG..............2911.001100000
.......................................................................................................................................................................................................................................................................................................................GTTG-----------------------------------------------------------------------------------------------------G----------------------------G---------------------------TGTGTGCATGTACGT......................................................................................................................................................2111.001000001
droGri2
ATTTCGGCAA------CAAAAACATC-----------ATAAAA--A------------------G--TAG---AT----GAAACTTTTTTGTGC---AAACAAAATTCGTCAGCA---TTTAAAAAAA---AACCTGAA--AAC------------------------------A---------TATTTCCAGAGAATCAGCTGCTTGATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------AAAGCTT------------TTTGTAATTATTT---------------------------------TTTT--------------CTT-----------TT----------------------GTGTGTATTTT--TTTC-----CAGTATCTCAAACTTTGACCATGGAGTCAAAACTTAGTTCAGGCGGCT---CAAACGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 11:59 AM