ID:

dsi_30390

 Coordinate:

3r:19351697-19351846 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.7 -3.6 -3.5 -3.4

Flybase annnotation

Antisense to three_prime_UTR [3r_19351097_19351662_+]; Antisense to exon [3r_19350204_19351662_+]; three_prime_UTR [3r_19351730_19352392_-]; exon [3r_19351730_19352631_-]

No Repeatable elements found

Sense Strand Reads

#######################################################################################################################################################################-----------------------------------------------------------------------------------
CCATTTATCCAAGAGGCAGACTTTTCTTAGCAACTTGTTGAGACTACTCCGTACGTAAAGCCCAAACATATATCGATATTATCGACTAGATTTAGTAGTACAAAACCATGTAACAACGCACAACATAATGGAACAATAAACAGTATACATTGAACACGTGTAATGCCAAAACATTGAGGTGTAAGCTCCATTTCGCTTCCACGATCCCCAAGAGGAAAGACGGACGATAATTTTGCATTGTCTTGTGCGA
****************************************************************************................................((...............(((((..((........))...)))))..))********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 M025
embryo
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 M023
head
 SRR553488
RT_0-2 hours eggs
 O002
Head
 M053
female body
 O001
Testis
..................................TTGTTGAGACTACTCCGTACGTAAAGCC............................................................................................................................................................................................ 28 0 1 4.00 4 2 0 0 1 1 0 0 0 0 0 0 0 0
......................................TGAGACTACTCCGTACGTAAAGCCCA.......................................................................................................................................................................................... 26 0 1 3.00 3 1 1 0 0 0 0 0 0 0 1 0 0 0
......................................TGAGACTACTCCGTACGTAAAGCCCAAACA...................................................................................................................................................................................... 30 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0
..................................TTGTTGAGACTACTCCGTACGTAAAGCCC........................................................................................................................................................................................... 29 0 1 3.00 3 1 1 0 1 0 0 0 0 0 0 0 0 0
.........CAAGAGGCAGACTTTTCTTAGCAACT....................................................................................................................................................................................................................... 26 0 1 3.00 3 1 0 0 0 1 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................TCCCCAAGAGGAAAGACGGACGATAAT................... 27 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................CAATAAACAGAATACATTGAACACGTG.......................................................................................... 27 1 1 2.00 2 1 0 0 0 0 0 0 1 0 0 0 0 0
...........................TAGCAACTTGTTGAGACTACT.......................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 1 0 0 1 0 0 0 0
..........................TTAGCAACTTGTTGAGACTACTCCGTA..................................................................................................................................................................................................... 27 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TGGAACAATAAACAGTATACATTGAACA.............................................................................................. 28 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
...................................TGTTGAGACTACTCCGTACGTAAAGCC............................................................................................................................................................................................ 27 0 1 2.00 2 0 1 0 0 0 0 0 0 0 1 0 0 0
......................................TGAGACTACTCCGTACGTAAAGCCC........................................................................................................................................................................................... 25 0 1 2.00 2 0 0 0 0 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................CACGCTCCCCAAGAGGAAAGACGGA.......................... 25 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................ACAGTATACATTGAACACGT........................................................................................... 20 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0
................................................................................................................................TGGAACAATAAACAGAATACATTGAA................................................................................................ 26 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................TGTTGAGACTACTCCGTACGTAAAGCCCA.......................................................................................................................................................................................... 29 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGACGGACGATAATTTTGC.............. 20 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0
............................................................................TATTATCGACTAGATTTAGTAGTACAAA.................................................................................................................................................. 28 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
...................................................TACGTAAAGCCCAAACATATATCGATA............................................................................................................................................................................ 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CGGACGATAATTTTGCATTGT......... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................TACGTAAAGCCCAAACATATATGGA.............................................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CTCCCCAAGAGGAAAGACGGA.......................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................CACAACATAATGGAACAATAAACAGTA......................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GAGGAAAGACGGACGATAATTTTGCAA............ 27 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
....TTATCCAAGAGGCAGACTTTTCTTAGCAACT....................................................................................................................................................................................................................... 31 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TGGAACAATAAACAGTATACATTGAACAA............................................................................................. 29 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................TTGTTGAGACTACTCCGTACGTAAAGCCCA.......................................................................................................................................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TGGAACAATAAACAGTATACATTGAACAC............................................................................................. 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................CTTGTTGAGACTACTCCG....................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1
......................................................................................TAGATTTAGTAGTACAAAACCATGTAA......................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TGAACACGTGTAATGCCAAAACATTGAGG....................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CATGTAACAACGCACAACATAATGGA...................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TAATTTTGCATTGTCTTGTGC.. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................TTGAACACGTGTAATGCCAAAACATTGA......................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....TATCCAAGAGACAGGCTTTT................................................................................................................................................................................................................................. 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................TTCTTAGCAACTTGTT................................................................................................................................................................................................................... 16 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................CAAAACCATGTAACAACGCACAACATAA.......................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TAAACAGTATACATTGAACAC............................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TGAACACGTGTAATGCCAAAACATTGAG........................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TAGATTTAGTAGTACAAAAACATGTA.......................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................TTAGCAACTTGTTGAGACTACTCCGT...................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TTATCGACTAGATTTAGTAGT....................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CGGACGATAATTTTGCATTGG......... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AGAGGAAAGACGGACGATAATTTTG............... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...TTTATCCAAGAGGCAGACTTTTCTTAGCAAC........................................................................................................................................................................................................................ 31 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TCCCTAAGAGGAAAGACGGACGATAA.................... 26 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................TGGAACAATAAACAGAATACATTGAAGA.............................................................................................. 28 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................ACTACTCCGTACGTAAAGCCC........................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................TGAGACTACTCCGTACGTAAAGCCCAAA........................................................................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TAGATTTAGTAGTACAAAACCATG............................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................CAATAAACAGAATACATTGAACACGTGT......................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................AACTTGTTGAGACTACTCCGTACG................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................ATTTAGTAGTACAAAACCATG............................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................TAAACAGAATACATTGAACACGTG.......................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......TCCAACAGGCAGACTTTTCTTAGCAACT....................................................................................................................................................................................................................... 28 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................TTTGCATTGTCTTGTGCG. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................................GATCCCCAAGAGGAAAGACGGACGAA...................... 26 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................TCCGTACGTAAAGCCCAAACATATAT................................................................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TGAACACGTGTAATGCCAAAACATTGA......................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................TTGTTGAGACTACTCCGTACGTAAAGCA............................................................................................................................................................................................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TAAACAGTATACATTGAACACGTG.......................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TAATGCCAAAACATTGAGGTGTAAGC................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CCCCAAGAGGAAAGACGGACGATAAT................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TTGAACACGTGTAATGCCAAAACATTGAGG....................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................TGAGACTACTCCGTACGTAAAGCCCAA......................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................ATACATTGAACACGTGT......................................................................................... 17 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GGAAAGACGGACGATAATTTTGCAT............ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................CAGAATACATTGAACACGTGT......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGGAAAGACGGACGATAATTTT................ 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................ACTCCGTACGTAAAGCCCAAACATATAT................................................................................................................................................................................. 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................TGTTGAGACTACTCCGTACGTAAAGCCC........................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................TTAGCAACTTGTTGAGACTACT.......................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................TACTCCGTACGTAAAGCCCAAACATA.................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................TTCTTAGCAACTTGTTGAGACT............................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
........................TCTTAGCAACTTGTTGAGACTACTCCG....................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................TGAGACTACTCCGTACGTAAAGCCCACG........................................................................................................................................................................................ 28 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................TGTTGAGACTACTCCGTACGTAA................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................TTTCGCTTCCACGCTCCCCAAGAGGAAAGA.............................. 30 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TAAACAGTATACATTGAACACGTGAA........................................................................................ 26 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...TTTATCCAAGAGGCAGACTTTTCT............................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GAGGAAAGACGGACGATAATTTTGCAT............ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GACGGACGATAATTTTGCATTGT......... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................ATGTTGAGACTACTCCGTACGTAAAGCCC........................................................................................................................................................................................... 29 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................TGGAACAATAAACAGTATACATTGAA................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
...............................................TCCGTACGTAAAGCCCAAACATATA.................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................TCTTAGCAACTTGTTGAGACTACTCCGT...................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................AACATATATCGATATTATCGACTAGAT............................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................TAATTTTGCATTGTCTTGTGAGA 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................GTTGAGACTACTCCGTACGTAAAGCCC........................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................GTAACAACGCACAACATAATGGAAC.................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................CTTAGCAACTTGTTGAGAC.............................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............GGCAGACTTTTCTTAGCAACTTGTTGAGAC.............................................................................................................................................................................................................. 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CACGTGTAATGCCAAAACATTGAGGTGTA................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TTCGCTTACACGATCCCC......................................... 18 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...........................TAGCAACTTGTTGAGA............................................................................................................................................................................................................... 16 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....TATCCAAGAGACAGGCTTT.................................................................................................................................................................................................................................. 19 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TAGAGGAAAGCCAGACGATAA.................... 21 3 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...TTTATCCGGGAGTCAGAC..................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################
GGTAAATAGGTTCTCCGTCTGAAAAGAATCGTTGAACAACTCTGATGAGGCATGCATTTCGGGTTTGTATATAGCTATAATAGCTGATCTAAATCATCATGTTTTGGTACATTGTTGCGTGTTGTATTACCTTGTTATTTGTCATATGTAACTTGTGCACATTACGGTTTTGTAACTCCACATTCGAGGTAAAGCGAAGGTGCTAGGGGTTCTCCTTTCTGCCTGCTATTAAAACGTAACAGAACACGCT
**********************************************************************************************................................((...............(((((..((........))...)))))..))**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 O002
Head
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 SRR553486
Makindu_3 day-old ovaries
.....................................................................................................................................................................................................................CCTTTCTGCCTGCTATTAAA................. 20 0 1 2.00 2 2 0 0 0 0 0 0 0
...AAATAGGTTCTCCGTCTGAA................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................AGGGGTCCTCCTTTCTGG............................ 18 2 1 1.00 1 0 1 0 0 0 0 0 0
...............................................AGGCATGCATTTCGGGTTTGT...................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................ATAGCTGATCTAAATCATCAT...................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................GAGGTAAAGCGAAGGTGCTAGGGGTT....................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................AACGGAAGGTGCTAGGGGTT....................................... 20 2 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................GGGGGTCTCCTTTCT.............................. 15 1 2 0.50 1 0 0 0 0 1 0 0 0
.......................................................................................................................................TATGTGTCATATGTCAATTGT.............................................................................................. 21 3 5 0.20 1 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................GGGAAAGCTAAGCTGCTAGGG.......................................... 21 3 6 0.17 1 0 0 1 0 0 0 0 0
.........................................................................GCTCTGATAGCTGATCT................................................................................................................................................................ 17 2 7 0.14 1 0 0 1 0 0 0 0 0
............................................................................................................ACATTGTTGCGTATT............................................................................................................................... 15 1 10 0.10 1 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................GAAGGTGCTAGGAGTTG...................................... 17 2 10 0.10 1 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................GGGTTCTCCGTTCTG............................. 15 1 10 0.10 1 0 0 0 0 0 1 0 0
..........................................................................CTATAATAGCTGAAC................................................................................................................................................................. 15 1 12 0.08 1 0 0 0 0 0 0 0 1
.......................AAAAATCGTTGATCAGCTCT............................................................................................................................................................................................................... 20 3 15 0.07 1 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................GGTCAAGCGAAGGTG................................................ 15 1 17 0.06 1 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:19351647-19351896 - dsi_30390 CCA------------T------------TT--------------------ATCCAAGAGGCAGACTT-TTCTTAGCAACT----TGTTGAGACTAC-TCCGTA-CGTAAAGCCCAA-----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGTAGTAC-----AAAA----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------AGTATACA----------TTGAACA---------CGTG------TAATGCCAAAAC-ATTGAGGTGTA----AGCTCCATTTCGCTTCCA-----------------------C----GATC-CCC------AAGAGG-AAAGA----------CG--G-ACG---ATAATTTTGCATTGTCTTGTGCGA
droSec2 scaffold_0:20155974-20156223 - CCA------------T------------TT--------------------ATCCAAGAGGCAGACTT-TTCTTAGCAACT----TGTTGAGACTAC-TCCGTA-CGTAAAGCCCAA-----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGTAGTAC-----AAAA----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------AGTATACA----------TTGAACA---------CGTG------TAATGCCAAAAC-ATTGAGGTGTA----AACTCCATTTCGCTTCCA-----------------------C----GATC-CCC------AAGAGG-AAAGA----------CG--G-ACG---ATAATTTTGCATTGTCTTGTGCGA
dm3 chr3R:19814445-19814694 - CCA------------T------------TT--------------------ATCCAAGAGGCAGACTT-TTCTTAGCAACT----TGTTGAGACTAC-TCCGTA-CGTAAAGCCCAA-----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAA----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------AGTATACA----------TTGAACA---------CGTG------TAATGCCAAAAC-ATTGAGGTGTA----AACTCCATTTCGCTTCCA-----------------------C----GATC-CCC------AAGAGG-AAAGA----------CG--G-ACG---ATAATTTTGCATTGTCTTGTGCGA
droEre2 scaffold_4820:8242511-8242765 + CCA------------T------------TT--------------------ATCCAAGAGGCAGACTT-TTCTTAGCAACT----TGTTGAGACTAC-TCCGTA-CGTAAAGCCCAA-----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAA----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------AGTACACA----------TTGAACA---------CGTGTACGAGTAATGCCAAAAC-ATTGAGGTGTA----AACTCCATTTCGCTTCCA-----------------------C----GATT-CCC------AAGAGG-AAAGA----------CG--G-ACG---A-TATTTTGCATTGTCTTGTGCGA
droYak3 3R:26687108-26687362 + CCA------------T------------TT--------------------AACCAAGAGGCAGACTT-GTCTTAGCAACT----TGTTGAGACTAC-TCCGTA-CGTAAAGCCCAA-----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAA----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------AGTATACA----------TTGAACA---------CGTGTACGAGTAATGCCAAAAC-ATTGAGGTGTG----AACTCCATTTCGCTTCCA-----------------------C----GATC-CCC------AAGAGG-AAAGA----------CG--G-ACG---A-TATTTTGCATTGTCTTGTGCGA
droEug1 scf7180000409798:579412-579660 + CAA------------T------------AT--------------------ATCCAAGAGGCAGATTT-TTCTTAGCAACC----TGTTGAGATTAC-TCCATA-CGTAAAGCCCAA-----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAC----CCATGTAACAA--CGCACA--GCA-------TAATGGAA-------CAATA------AAC----------------AATATACA----------TTAAATA---------CATG------TAATGCCAAAAC-ATTGAGGTGTA----AACAACATTTCGCTTCCA-----------------------C----GATT-CCC------AAGAGG-AAAGA----------CG--G-ACG---A-TATTTTGCATTGTCTTGTGCGA
droBia1 scf7180000302136:154731-154997 - CAA------------T------------AT--------------------ATCCAAGAGGCCGATTT-GTCTCAGCAACC----TGTTGAGTCTAC-TCCGTA-CGTAAAGCCCAAA----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAC----CCATGTAACAACACGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------AATATACA----------TTGAATA---------CGTG------TAATGCCAAAAC-ATTGAGATGTA----AACTCCATTTCGCTTCCA-TGAGCCCCACGAT--------------CCCC-CCC------GAGAGG-AAAGT----------CG--G-ATGGTAT-TTTTTTGCATTATCTTGTGCGA
droTak1 scf7180000415183:19280-19505 + CAA------------T------------AT--------------------ATCC------------------TAGCAACC----TGTTGAGATTAC-TCCGTA-CGTAAAGCCCAA-----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAC----CCATGTAACAA--CGCACAACACA-------TAATGGAA-------CAATA------AAC----------------AATATACA----------TTGAGTA---------CATG------TAATGCCAAAAT-ATTGAGGTGTA----AACTCCAATTCGCTTCC-----------------------------------CC----AAAAA-----AGGA----------CA--GTATG---A-TATTTTGCATTGTCTTGTGCGA
droEle1 scf7180000491008:112921-113167 - CAA------------T------------AT--------------------ATCCAAGAGGCAGATTT-GCCCTAGCAACC----TGTTGAGATTAC-GCCGTA-CGTAAAGCCCGA-----------------------ACATATATGTATCAATATTATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAC----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------AATATACA----------TTGAATA---------CGTG------TAATGCCAAAAC-ATG---A--TA----TACTCCACTTCGCTTGCG-----------------------C----GATC-CCC------AAGCGT-A-GAA----------CA--G-ATA---A-TTTTTTGCATTGTCTTGCGCGA
droRho1 scf7180000779169:86688-86934 + CAA------------T------------AT--------------------ATCCAAGAGGCAGACTT-GTCTTGGCAACC----TGTTGAGATTAC-TCCATA-CGTAAAGCCCAA-----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAC----CCATGTAACAA--CGCACA--GCA-------TAATGGAA-------CAATA------AAC----------------AATACACA----------TTGAATA---------CGTG------TAA-GCCAAAAC-ATTAAGGTGTA----AACTCCATTT-GCTTCCA-----------------------C----GACC-CCC------AAGAGT-AAGGA----------CG--G-ATA---A-TATTTTGCATTGTCATGTGCGA
droFic1 scf7180000453800:1994399-1994639 - CAA------------T------------AT--------------------ATCCCAGAGGCAAATTC-TTCTTAGCAAGC----TGTTGAGATTAC-TCCGTA-CGTAAAGCCCAAA----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAC----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------AATATACA----------------------------TG------TAATGCCAAAAC-ATTGAGATGTA----AACTCCATTTCGCTTCCC-----------------------A----ATTT-CCC------TAGAGG-AAAGA----------CG--A-ATG---A-TTTTTTGCATTGTCTTGTGCGA
droKik1 scf7180000302778:208572-208805 - TTA------------GCTACCTAAATATAT--------------------ATCCAG-------------------------------------------CGTA-CGGAAAGCCCCAAAA------CACACAAAACACAC--ATACATATATCGATATTATCGA-------------------------------------------CTAGATATAGAAGTAC-----AAACTGGCCCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------TATTTACACACATTATC-T-----------------TG------TACT------CC-ACTGAGTATG----------TATTTCGCTTTCG-----------------------C----GATC-CCC------CAGAGG-AAGGA--------------G-GCA---A-CATTTGGCATTGTCTTGTGCGA
droAna3 scaffold_13340:7744970-7745241 + CAA------------T------------TT--------------------ATCCAAGAGGCCGATTATTCCATAGCAACC----TGTTGAGATTAT-ACCATAATGTAATGCCGAAA----------------------ACATACATATATCGATATTATCGA-------------------------------------------CTAGAGTTAGAAGTAC-----AAAA----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AACATAA---TGGAAA---CATATACA----------TTGTC-AGTTTGTCAGTTTG------TAATGCCAAACC-ATTGAGACTCA----AAC------TCGCTTG--------------AT-----CACTC----GCT--CCC------GGGAGGTAATGA----------GG--G-ACA---A-TACTTTGCATTGTCTTGCACGA
droBip1 scf7180000396708:1104120-1104377 - CAA------------T------------TT--------------------ATCCAAGAGGCCGATT---CCATAGCAACC----TGTTGAGATTAT-AACATA-TGTAATGCCGGT-----------------------AT-----TGTATCGATATTATCGA-------------------------------------------CTAGAGTTAGAAGTAC-----AAA-----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AACATAA---TGGAA-AACAATATACA----------ATGACCA---------TTTG------TAATGCCAAATCGATTGAG----------ACTCCAACTGGCTGG--------------AT-----CACTCC---AGCC-ACC------GGGCGGTAATGA----------GA--G-GCA---A-TATTTTGCATTGTCTTGCACGA
dp5 2:14322275-14322564 - GCA------------TTCACCTAA----------TT-------CCTACCC-CTCAAGAGGCAAATT---TCTTACCAACATAAATGTTGAGTTTATATATATA-CGTGAAGCCCTATAGCCGTACTATATAGAGTATCA--ACATATATATCGATTGTATTGA-------------------------------------------ATAGTTTTAGAAGTAG-----AACA----CATCGT--------GTAAA--ACA-------TAACCGAA-------CAATA------AAT---------------------ACA---------TTTGAATA---------CATG------TAATGCCCAAT--------------------------TCGCAT-----------------TTTTCCTTTTGATAGATCCTCCCTCCATACCTGG-ATTGATAGAACAGACTCCAT-ATG---AGTATATCGCAGCGTCTTGCACGA
droPer2 scaffold_0:6109568-6109857 + GCA------------TTCACCTAA----------TA-------CCTACCC-CTCAAGAGGCAAATT---TCTTACCAACATAAATGTTGAGTTTATATATATA-CGTAAAGCCCTATAGCCATACTATATAGAGTATGA--ACATATATATCGATTGTATTGA-------------------------------------------ATAGTTTTAGAGTTAC-----AACA----CATCGTA--------TAAA--ACA-------TAACCGAA-------CAATA------AAT---------------------ACA---------TTTGAATA---------CATG------TAATGCCCAATT--------TG-----------CATTTTTCTTTT------------------------TGATAAATCCTCCCTCTATACCTGG-ATTGATAGAACAGACTCCAT-ATG---AGTATATCGCAGTGTCTTGTACGA
droWil2 scf2_1100000004902:1072363-1072544 + CAT------------T-TACC-AA----------TA-------CAAACACATACAAGAGGCCGAAA---TCTCAACAGAC----A--AGAGATAAC-CCAATA-CGTAAAAACTC------------------------------TATTAGAGATATCA--AA-------------------------------------------TTAGTCTTAGAAGTAC-----AAAAC-TCTGATGTAGCAA--CGCACA--ACAACAACAATTATGGAA-------CAATAATAAAG------AT------TA---AATATACA----------------------------TA------C-ATACCGAAA---------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13047:18549426-18549699 - CTA------------T------------ATCTGACAAAATCAAGCAAACC-CCAGAGAGGCATGTTC-TTAT--------------------------ATTTG-GACAGAGACATAT------------------------------------------------AGATC----------ACCTATACTAGCTTATAGATATTGAATTTGTTTTAGAAGTTAACAGAAAAT------------------------------ATAT-ATATGTAATATCGACCAGTAATTAAA------ACAAT---A-AAAAAAGTATA----------TCATATG-----------AA------AACTGTTGTTGC-CTTGGGATCCA-----------T------TTAA-TGAGCTCTATGATATTGCCTTTC----GACC-CGC------CCGCAA-AACAA----------GA--T-TCC---A-TAGTTCGCTTCACTTTGTGCGG
droMoj3 scaffold_6540:7094196-7094458 - CCAATACGAAAACTAT------------ATCTGAAA--ATAGATCAA---ACCCCAGAGGCAAGTTC-TTA--------------------------TACGTA-CATA-----CAT-----------------------AC----ATATGTAGACATAGTCATATAGAT--------------TATAATTACTCATAGATATCAAATATGCTATAGAAATAA-TAAAGAAC------------------------------AAGA-ATATGTAA-------CAGCAATAAAG------ATGAC---A-AAAAGTATATT----------TCGTACT-----------------------------AC-TTTGAATCATTCGCAATCTCCATCTTTCAAC------------------------------CAAT-CTG------GAA-----AGGA----------CA--A-AGG--AA-TAGTTCGCTTTAACTTGTGCGG
droGri2 scaffold_15074:6149737-6150005 + CTA------------T------------ATCTTAAA--A----GAGA---ATCCCAGAGGCACCTAG-GTATAGGCAT-------------------------------------AT------------------------------------------------AAACCTGTGTACGGCAAATTAATTTGCTCATAAAAATTTAATTTGCTTTAGAAGTAAATCGTAAAA----ATATATAATAA--CGCACA--TCT-------ATTAAAAA-------CAAAA----A-AAC----------------AATAAAAG----------AAAATTA---------CATT------TAACAAATAAAA-ATG---GAATC----ATTTTTACTTTGCCGTCACCCAGAAACATGAT--------------AATT-CTC----A-AAGAGA-ATACA----------TA--A-TTC--AG-TAATTCGCATTATTTTCTGCGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCA------------T------------TT--------------------ATCCAAGAGGCAGACTT-TTCTTAGCAACT----TGTTGAGACTAC-TCCGTA-CGTAAAGCCCAA-----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGTAGTAC-----AAAA----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------AGTATACA----------TTGAACA---------CGTG------TAATGCCAAAAC-ATTGAGGTGTA----AGCTCCATTTCGCTTCCA-----------------------C----GATC-CCC------AAGAGG-AAAGA----------CG--G-ACG---ATAATTTTGCATTGTCTTGTGCGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................T----TGTTGAGACTAC-TCCGTA-CGTAAAGCC....................................................................................................................................................................................................................................................................................................................................................................................................2814.00400100020001000000
.......................................................................................TGAGACTAC-TCCGTA-CGTAAAGCCCA..................................................................................................................................................................................................................................................................................................................................................................................................2613.00300000011010000000
.......................................................................................TGAGACTAC-TCCGTA-CGTAAAGCCCAA-----------------------AC----A...................................................................................................................................................................................................................................................................................................................................................................3013.00300000021000000000
...............................................................................T----TGTTGAGACTAC-TCCGTA-CGTAAAGCCC...................................................................................................................................................................................................................................................................................................................................................................................................2913.00300100011000000000
.....................................................CAAGAGGCAGACTT-TTCTTAGCAACT----.................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300000010101000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TC-CCC------AAGAGG-AAAGA----------CG--G-ACG---ATAAT...................2713.00300000021000000000
........................................................................TAGCAACT----TGTTGAGACTAC-T...................................................................................................................................................................................................................................................................................................................................................................................................................2112.00211000000000000000
.......................................................................TTAGCAACT----TGTTGAGACTAC-TCCGTA-.............................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000011000000000
.............................................................................................................................................................................................................................................................................TGGAA-------CAATA------AAC----------------AGTATACA----------TTGAACA---------............................................................................................................................................................2812.00200000000000002000
....................................................................................TGTTGAGACTAC-TCCGTA-CGTAAAGCC....................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000001010000000
.......................................................................................TGAGACTAC-TCCGTA-CGTAAAGCCC...................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000000001010000
.....................................................................................................................................................................................................................................................................................................AC----------------AGTATACA----------TTGAACA---------CGT.........................................................................................................................................................2012.00200200000000000000
....................................................................................TGTTGAGACTAC-TCCGTA-CGTAAAGCCCA..................................................................................................................................................................................................................................................................................................................................................................................................2912.00200000011000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGA----------CG--G-ACG---ATAATTTTGC..............2012.00200200000000000000
..........................................................................................................................................................TATTATCGA-------------------------------------------CTAGATTTAGTAGTAC-----AAA...............................................................................................................................................................................................................................................................................2812.00200000000000002000
.....................................................................................................TA-CGTAAAGCCCAA-----------------------AC----ATATATCGATA.........................................................................................................................................................................................................................................................................................................................................................2712.00200000002000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG--G-ACG---ATAATTTTGCATTGT.........2111.00100100000000000000
..........................................................................................................................................................................................................................................................CACA--ACA-------TAATGGAA-------CAATA------AAC----------------AGTA..........................................................................................................................................................................................2711.00100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGG-AAAGA----------CG--G-ACG---ATAATTTTGCAA............2711.00100000000000010000
............................TT--------------------ATCCAAGAGGCAGACTT-TTCTTAGCAACT----.................................................................................................................................................................................................................................................................................................................................................................................................................................3111.00100000001000000000
.............................................................................................................................................................................................................................................................................TGGAA-------CAATA------AAC----------------AGTATACA----------TTGAACA---------A...........................................................................................................................................................2911.00100000000000001000
...............................................................................T----TGTTGAGACTAC-TCCGTA-CGTAAAGCCCA..................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000000000
.............................................................................................................................................................................................................................................................................TGGAA-------CAATA------AAC----------------AGTATACA----------TTGAACA---------C...........................................................................................................................................................2911.00100000000000001000
..............................................................................CT----TGTTGAGACTAC-TCCG................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
...............................................................................................................................................................................................................TAGATTTAGTAGTAC-----AAAA----CCATGTAA..................................................................................................................................................................................................................................................................2711.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................TGAACA---------CGTG------TAATGCCAAAAC-ATTGAGG..............................................................................................................................2911.00100000001000000000
............................................................................................................................................................................................................................................CATGTAACAA--CGCACA--ACA-------TAATGGA....................................................................................................................................................................................................................................2611.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTTTGCATTGTCTTGTGC..2111.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................TTGAACA---------CGTG------TAATGCCAAAAC-ATTGA................................................................................................................................2811.00100000010000000000
....................................................................TTCTTAGCAACT----TGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
.............................................................................................................................................................................................................................C-----AAAA----CCATGTAACAA--CGCACA--ACA-------TAA........................................................................................................................................................................................................................................2811.00100000000000001000
............................................................................................................................................................................................................................................................................................TA------AAC----------------AGTATACA----------TTGAACA---------C...........................................................................................................................................................2111.00100000000000001000
..........................................................................................................................................................................................................................................................................................................................................TGAACA---------CGTG------TAATGCCAAAAC-ATTGAG...............................................................................................................................2811.00100000010000000000
.......................................................................TTAGCAACT----TGTTGAGACTAC-TCCGT...............................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
............................................................................................................................................................TTATCGA-------------------------------------------CTAGATTTAGTAGT.........................................................................................................................................................................................................................................................................................2111.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG--G-ACG---ATAATTTTGCATTGG.........2111.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGG-AAAGA----------CG--G-ACG---ATAATTTTG...............2511.00100000000000001000
...............T------------TT--------------------ATCCAAGAGGCAGACTT-TTCTTAGCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................3111.00100000001000000000
...........................................................................................ACTAC-TCCGTA-CGTAAAGCCC...................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.......................................................................................TGAGACTAC-TCCGTA-CGTAAAGCCCAA-----------------------A.........................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
...............................................................................................................................................................................................................TAGATTTAGTAGTAC-----AAAA----CCATG.....................................................................................................................................................................................................................................................................2411.00100000001000000000
............................................................................AACT----TGTTGAGACTAC-TCCGTA-CG...........................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
..................................................................................................................................................................................................................ATTTAGTAGTAC-----AAAA----CCATG.....................................................................................................................................................................................................................................................................2111.00100000100000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCATTGTCTTGTGCG.1811.00100000100000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GATC-CCC------AAGAGG-AAAGA----------CG--G-ACG---AA......................2611.00100000000000010000
.................................................................................................TCCGTA-CGTAAAGCCCAA-----------------------AC----ATATAT..............................................................................................................................................................................................................................................................................................................................................................2611.00100000000000001000
..........................................................................................................................................................................................................................................................................................................................................TGAACA---------CGTG------TAATGCCAAAAC-ATTGA................................................................................................................................2711.00100000001000000000
...............................................................................T----TGTTGAGACTAC-TCCGTA-CGTAAAGCA....................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
............................................................................................................................................................................................................................................................................................TA------AAC----------------AGTATACA----------TTGAACA---------CGTG------..................................................................................................................................................2411.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................TAATGCCAAAAC-ATTGAGGTGTA----AGC...................................................................................................................2611.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................C-CCC------AAGAGG-AAAGA----------CG--G-ACG---ATAAT...................2611.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................TTGAACA---------CGTG------TAATGCCAAAAC-ATTGAGG..............................................................................................................................3011.00100000010000000000
.......................................................................................TGAGACTAC-TCCGTA-CGTAAAGCCCAA-----------------------..........................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000001000
..........................................................................................................................................................................................................................................................................................................................ATACA----------TTGAACA---------CGTG------T.................................................................................................................................................1711.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GG-AAAGA----------CG--G-ACG---ATAATTTTGCAT............2511.00100000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG-AAAGA----------CG--G-ACG---ATAATTTT................2211.00101000000000000000
..............................................................................................AC-TCCGTA-CGTAAAGCCCAA-----------------------AC----ATATAT..............................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
....................................................................................TGTTGAGACTAC-TCCGTA-CGTAAAGCCC...................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
.......................................................................TTAGCAACT----TGTTGAGACTAC-T...................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
.............................................................................................TAC-TCCGTA-CGTAAAGCCCAA-----------------------AC----ATA.................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000001000
....................................................................TTCTTAGCAACT----TGTTGAGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.....................................................................TCTTAGCAACT----TGTTGAGACTAC-TCCG................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000001000
.......................................................................................TGAGACTAC-TCCGTA-CGTAAAGCCCAC-----------------------G.........................................................................................................................................................................................................................................................................................................................................................................2811.00100000000001000000
....................................................................................TGTTGAGACTAC-TCCGTA-CGTAA........................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
...............T------------TT--------------------ATCCAAGAGGCAGACTT-TTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGG-AAAGA----------CG--G-ACG---ATAATTTTGCAT............2711.00100000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA----------CG--G-ACG---ATAATTTTGCATTGT.........2311.00100100000000000000
.............................................................................................................................................................................................................................................................................TGGAA-------CAATA------AAC----------------AGTATACA----------TTGAA.......................................................................................................................................................................2611.00100000000010000000
.................................................................................................TCCGTA-CGTAAAGCCCAA-----------------------AC----ATATA...............................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
.....................................................................TCTTAGCAACT----TGTTGAGACTAC-TCCGT...............................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000001000
...................................................................................................................A-----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGAT.................................................................................................................................................................................................................................................................................................2711.00100000000100000000
.....................................................................................GTTGAGACTAC-TCCGTA-CGTAAAGCCC...................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
...............................................................................................................................................................................................................................................GTAACAA--CGCACA--ACA-------TAATGGAA-------C...........................................................................................................................................................................................................................2511.00100010000000000000
......................................................................CTTAGCAACT----TGTTGAGAC........................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
..........................................................GGCAGACTT-TTCTTAGCAACT----TGTTGAGAC........................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................................CA---------CGTG------TAATGCCAAAAC-ATTGAGGTGTA----......................................................................................................................2911.00100000001000000000
........................................................................TAGCAACT----TGTTGAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................1620.50100000000001000000
droSec2
CCA------------T------------TT--------------------ATCCAAGAGGCAGACTT-TTCTTAGCAACT----TGTTGAGACTAC-TCCGTA-CGTAAAGCCCAA-----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGTAGTAC-----AAAA----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------AGTATACA----------TTGAACA---------CGTG------TAATGCCAAAAC-ATTGAGGTGTA----AACTCCATTTCGCTTCCA-----------------------C----GATC-CCC------AAGAGG-AAAGA----------CG--G-ACG---ATAATTTTGCATTGTCTTGTGCGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................TAC-----AAAA----CCATGTAACAA--CGCACA--ACA-------...........................................................................................................................................................................................................................................2711.0011000
..................................................................................................................................................................................................................................................ACAA--CGCACA--ACA-------TAATGGA....................................................................................................................................................................................................................................2011.0011000
...............T------------TT--------------------ATCCAAGAGGCAGACTT-TTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
dm3
CCA------------T------------TT--------------------ATCCAAGAGGCAGACTT-TTCTTAGCAACT----TGTTGAGACTAC-TCCGTA-CGTAAAGCCCAA-----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAA----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------AGTATACA----------TTGAACA---------CGTG------TAATGCCAAAAC-ATTGAGGTGTA----AACTCCATTTCGCTTCCA-----------------------C----GATC-CCC------AAGAGG-AAAGA----------CG--G-ACG---ATAATTTTGCATTGTCTTGTGCGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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.........................................................................................................................................................................................................................................................................................................................................................CGTG------TAATGCCAAAAC-ATTGAGGTG............................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TGAGACTAC-TCCGTA-CGTAAAGCCCAA-----------------------AC----A...................................................................................................................................................................................................................................................................................................................................................................3012.0020000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TAGCAACT----TGTTGAGACTAC-TCCGT...............................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
CCA------------T------------TT--------------------ATCCAAGAGGCAGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TT--------------------ATCCAAGAGGCAGACTT-TT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CA------------T------------TT--------------------ATCCAAGAGGCAGACTT-TTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................GAGGCAGACTT-TTCTTAGCAACT----TGTTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................CT----TGTTGAGACTAC-TCCGTA-CGTAAAGC.....................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TGTTGAGACTAC-TCCGTA-CGTAAAG......................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................TTCCA-----------------------C----GATC-CCC------AAGAGG-AAAGA----------CG--G-..............................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
..........................................................................................................................................................................................................................................................................TAATGGAA-------CAATA------AAC----------------AGTATACA----------TTGA........................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG--G-ACG---ATAATTTTGCATTGT.........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CC------AAGAGG-AAAGA----------CG--G-ACG---ATAATTT.................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TT-TTCTTAGCAACT----TGTTGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000000000000000
...............T------------TT--------------------ATCCAAGAGGCAGACTT-T................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................CAATA------AAC----------------AGTATACA----------TTGAACA---------CGT.........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TTCCA-----------------------C----GATC-CCC------AAGAGG-AAAGA----------CG--G-A.............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................AATA------AAC----------------AGTATACA----------TTGAACA---------CGTG------..................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------C----GATC-CCC------AAGAGG-AAAGA----------CG--G-AC............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................C-CCC------AAGAGG-AAAGA----------CG--G-ACG---ATAA....................2511.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GAAGTAC-----AAAA----CCATGTAACAA--CGCACA--A....................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CTTCCA-----------------------C----GATC-CCC------AAGAGG-...................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................T-TTCTTAGCAACT----TGTTGAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................ATA------AAC----------------AGTATACA----------TTGAACA---------CGTG------..................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................ATATTATCGA-------------------------------------------CTAGATTTAGAAG..........................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................ACTAC-TCCGTA-CGTAAAGCCC...................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................AAAGCCCAA-----------------------AC----ATATATCGATATTATCGA-------------------------------------------C......................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------CG--G-ACG---ATAATTTTGCA.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................C-TCCGTA-CGTAAAGCCCAA-----------------------AC----ATA.................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CTCCATTTCGCTTCCA-----------------------C----GATC-...................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................................................................TCCGTA-CGTAAAGCCCAA-----------------------AC----ATATATC.............................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................A-------TAATGGAA-------CAATA------AAC----------------AG............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CC------AAGAGG-AAAGA----------CG--G-ACG---ATAATT..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..A------------T------------TT--------------------ATCCAAGAGGCAGACTT-TTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................CAAAAC-ATTGAGGTGTA----AACTCCATTTCGC.........................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CCATGTAACAA--CGCACA--ACA-------TAATGGA....................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................TATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAA----CT........................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................AAAC-ATTGAGGTGTA----AACTCCATT.............................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................TTTAGAAGTAC-----AAAA----CCATGTAACAA--C............................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TAACAA--CGCACA--ACA-------TAATGG.....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CCC------AAGAGG-AAAGA----------CG--G-ACG---........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................CA-------TAATGGAA-------CAATA------AAC----------------AGTATACA----------............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TT--------------------ATCCAAGAGGCAGACTT-TTCTTAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................CT----TGTTGAGACTAC-TCCGTA-CGT..........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
....................................................................................................................................................................................................................................................................................................AAC----------------AGTATACA----------TTGAACA---------CGT.........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................................................................................TGAACA---------CGTG------TAATGCCAAAAC-ATT..................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TCCATTTCGCTTCCA-----------------------C----GATC-CCC------AAGAGG-...................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-ACG---ATAATTTTGCATTGTCTTGTGC..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CA-----------------------C----GATC-CCC------AAGAGG-AAA................................................1911.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-AAAGA----------CG--G-ACG---ATAATTTTGCATTGT.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AATGCCAAAAC-ATTGAGGTGTA----AACTCCA...............................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TT--------------------ATCCAAGAGGCAGACTT-TTCTTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................C----GATC-CCC------AAGAGG-AAAGA----------CG--................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................T--------------------ATCCAAGAGGCAGACTT-TTCTTAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATC-CCC------AAGAGG-AAAGA----------CG--G-ACG---ATAA....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................TCTTAGCAACT----TGTTGAGACTAC-TCCGTA-.............................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................AC-----AAAA----CCATGTAACAA--CGCACA--ACA-------...........................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................ATTGAGGTGTA----AACTCCATTTCGCTTC......................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-ACG---ATAATTTTGCATTGTCTTGTGCGA2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ACTT-TTCTTAGCAACT----TGTTGAGACTAC-TC..................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TAGCAACT----TGTTGAGACTAC-TCCGTA-C............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TAGATTTAGAAGTAC-----AAAA----CCATGTAACT................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TTTCGCTTCCA-----------------------C----GATC-CCC------AAGAGG-A..................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TA----AACTCCATTTCGCTTCC.....................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CA------------T------------TT--------------------ATCCAAGAGGCAGACTT-TTCTTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TGGAA-------CAATA------AAC----------------AGTATACA----------TTGAACA---------............................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................A--ACA-------TAATGGAA-------CAATA------AAC----------------AGTATA........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................GCAACT----TGTTGAGACTAC-TCCGTA-CGTAAA.......................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TTGAGACTAC-TCCGTA-CGTAAAGCCA...................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................CGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------AG............................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................CTAGATTTAGAAGTAC-----AAAA----CCATGT....................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TCCGTA-CGTAAAGCCCAA-----------------------AC----ATATATCGA...........................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TGTTGAGACTAC-TCCGTA-CGT..........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................GAGGCAGACTT-TTCTTAGCAACT----TGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CCC------AAGAGG-AAAGA----------CG--G-ACG---ATAATTT.................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................ACT----TGTTGAGACTAC-TCCGTA-CGTAAAGC.....................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GAACA---------CGTG------TAATGCCAAAAC-.....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGCATTGTCTTGTGCGA2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TA------AAC----------------AGTATACA----------TTGAA.......................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GTTGAGACTAC-TCCGTA-CGTAAAGCCCAA-----------------------A.........................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................A----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------............................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GAGGCAGACTT-TTCTTAGCAACT----TG...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TTCCA-----------------------C----GATC-CCC------AAGAGG-AAAGA----------....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CTCCATTTCGCTTCCA-----------------------C----GATC-CCC------..........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................TGTAACAA--CGCACA--ACA-------T..........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCA-----------------------C----GATC-CCC------AAGAGG-...................................................2111.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------.................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TGAGACTAC-TCCGTA-CGTAAAGCCC...................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TT--------------------ATCCAAGAGGCAGACTT-TTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TCGCTTCCA-----------------------C----GATC-CCC------AAGAGG-AAAG...............................................2711.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................T----TGTTGAGACTAC-TCCGTA-CGTAAAG......................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TGAACA---------CGTG------TAATGCCAAAAC-A....................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................CT----TGTTGAGACTAC-TCCGTA-CGTAAAG......................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................T----TGTTGAGACTAC-TCCGTA-C............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................................CAAGAGGCAGACTT-TTCTTAGCAACT----T................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................CAACT----TGTTGAGACTAC-TCCG................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CCA-----------------------C----GATC-CCC------AAGAGG-AAAG...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................CAACT----TGTTGAGACTAC-TCCGTA-CGTAAA.......................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................T--------------------ATCCAAGAGGCAGACTT-TTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
.............................................................AGACTT-TTCTTAGCAACT----TGTTGAGAC........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................A------AAC----------------AGTATACA----------TTGAACA---------CGTG------TAATG.............................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................AAGTAC-----AAAA----CCATGTAACAA--CGCACA--.....................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AATGCCAAAAC-ATTGAGGTGTA----AAC...................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CCA------------T------------TT--------------------ATCCAAGAGGCAGACTT-TTCTTAGCAACT----TGTTGAGACTAC-TCCGTA-CGTAAAGCCCAA-----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAA----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------AGTACACA----------TTGAACA---------CGTGTACGAGTAATGCCAAAAC-ATTGAGGTGTA----AACTCCATTTCGCTTCCA-----------------------C----GATT-CCC------AAGAGG-AAAGA----------CG--G-ACG---A-TATTTTGCATTGTCTTGTGCGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................TCTTAGCAACT----TGTTGAGACTAC-TCC.................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000004
............................................................CAGACTT-TTCTTAGCAACT----TGTTGAGAC........................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000002
.................................................................................................................................................................................................................GATTTAGAAGTAC-----AAAA----CCAT......................................................................................................................................................................................................................................................................2111.0010000010
.................................................................................................TCCGTA-CGTAAAGCCCAA-----------------------AC----ATATAT..............................................................................................................................................................................................................................................................................................................................................................2611.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGCATTGTCTTGTGCGA2111.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CA-----------------------C----GATT-CCC------AAGAGG-AAAGA----------CG--G-ACG---A-......................2811.0011000000
............................................................................................................................................................................................................................................................................................................................ACA----------TTGAACA---------CGTGTACGAGTAATGCC...........................................................................................................................................2711.0011000000
.......................................................................................TGAGACTAC-TCCGTA-CGTAAAGCCCA..................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
...............................................................................................................................................................TCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAA----CCATG.....................................................................................................................................................................................................................................................................2911.0011000000
...............................................................................................................................................................................................................................................................................................................................................A---------CGTGTACGAGTAATGCCAAA........................................................................................................................................2111.0010000100
................................................................................................................................................................................................................................................TAACAA--CGCACA--ACA-------TAATGGAA-------CAA.........................................................................................................................................................................................................................2611.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................TGTA----AACTCCATTTCGCTTCCA-----------------------C----GA......................................................................2511.0011000000
....................................................................TTCTTAGCAACT----TGTTGAGACTAC-TCCG................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
......................................................AAGAGGCAGACTT-TTCTTAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
....................................................................................................................................................................................................................................................................................................AAC----------------AGTACACA----------TTGAACA---------CGT.........................................................................................................................................................2111.0010100000
...............................................................................T----TGTTGAGACTAC-TCCGTA-CGTAAAGCCC...................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
droYak3
CCA------------T------------TT--------------------AACCAAGAGGCAGACTT-GTCTTAGCAACT----TGTTGAGACTAC-TCCGTA-CGTAAAGCCCAA-----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAA----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------AGTATACA----------TTGAACA---------CGTGTACGAGTAATGCCAAAAC-ATTGAGGTGTG----AACTCCATTTCGCTTCCA-----------------------C----GATC-CCC------AAGAGG-AAAGA----------CG--G-ACG---A-TATTTTGCATTGTCTTGTGCGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................GA-------------------------------------------CTAGATTTAGAAGTAC-----AAAA----CCAT......................................................................................................................................................................................................................................................................2611.00101000000000
............................................................................AACT----TGTTGAGACTAC-TCCGTA-C............................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
......................................................................CTTAGCAACT----TGTTGAGACTAC-TCC.................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
............................................................................................................................................................................................................................................................................................................................................................GTACGAGTAATGCCAAAAC-ATTGAGGC.............................................................................................................................2711.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATTTCGCTTCCA-----------------------C----GATC-CCC------AAGA......................................................2411.00101000000000
............................TT--------------------AACCAAGAGGCAGACTT-GTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................GTAATGCCAAAAC-ATTGAGGTGT...........................................................................................................................2311.00101000000000
............................................................................................CTAC-TCCGTA-CGTAAAGCCC...................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
..............................................................................................................................................................................................................................................................................................................................A----------TTGAACA---------CGTGTACGAGTAATGCC...........................................................................................................................................2511.00100000010000
...............................................................................................C-TCCGTA-CGTAAAGCCCAA-----------------------AC----....................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000
...........................................................................................................................................................................................................................................................................................................................TACA----------TTGAACA---------CGTGTACGAGTAATGC............................................................................................................................................2711.00101000000000
............................TT--------------------AACCAAGAGGCAGACTT-GTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
............................................................................................................................................................................................................................................................................................................................................AACA---------CGTGTACGAGTAATGCCAA.........................................................................................................................................2311.00100000010000
..................................................................................................................................................................................................................................................................A-------TAATGGAA-------CAATA------AAC----------------AGT...........................................................................................................................................................................................2011.00101000000000
.............................................................................................................................................................................................................................................................................................A------AAC----------------AGTATACA----------TTGAACA---------CGT.........................................................................................................................................................2211.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................TTGAGGTGTG----AACTCCATTTCGCT........................................................................................................2411.00110000000000
droEug1
CAA------------T------------AT--------------------ATCCAAGAGGCAGATTT-TTCTTAGCAACC----TGTTGAGATTAC-TCCATA-CGTAAAGCCCAA-----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAC----CCATGTAACAA--CGCACA--GCA-------TAATGGAA-------CAATA------AAC----------------AATATACA----------TTAAATA---------CATG------TAATGCCAAAAC-ATTGAGGTGTA----AACAACATTTCGCTTCCA-----------------------C----GATT-CCC------AAGAGG-AAAGA----------CG--G-ACG---A-TATTTTGCATTGTCTTGTGCGASizeHit CountTotal NormTotal
No Reads
droBia1
CAA------------T------------AT--------------------ATCCAAGAGGCCGATTT-GTCTCAGCAACC----TGTTGAGTCTAC-TCCGTA-CGTAAAGCCCAAA----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAC----CCATGTAACAACACGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------AATATACA----------TTGAATA---------CGTG------TAATGCCAAAAC-ATTGAGATGTA----AACTCCATTTCGCTTCCA-TGAGCCCCACGAT--------------CCCC-CCC------GAGAGG-AAAGT----------CG--G-ATGGTAT-TTTTTTGCATTATCTTGTGCGASizeHit CountTotal NormTotal
No Reads
droTak1
CAA------------T------------AT--------------------ATCC------------------TAGCAACC----TGTTGAGATTAC-TCCGTA-CGTAAAGCCCAA-----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAC----CCATGTAACAA--CGCACAACACA-------TAATGGAA-------CAATA------AAC----------------AATATACA----------TTGAGTA---------CATG------TAATGCCAAAAT-ATTGAGGTGTA----AACTCCAATTCGCTTCC-----------------------------------CC----AAAAA-----AGGA----------CA--GTATG---A-TATTTTGCATTGTCTTGTGCGASizeHit CountTotal NormTotal
No Reads
droEle1
CAA------------T------------AT--------------------ATCCAAGAGGCAGATTT-GCCCTAGCAACC----TGTTGAGATTAC-GCCGTA-CGTAAAGCCCGA-----------------------ACATATATGTATCAATATTATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAC----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------AATATACA----------TTGAATA---------CGTG------TAATGCCAAAAC-ATG---A--TA----TACTCCACTTCGCTTGCG-----------------------C----GATC-CCC------AAGCGT-A-GAA----------CA--G-ATA---A-TTTTTTGCATTGTCTTGCGCGASizeHit CountTotal NormTotal
No Reads
droRho1
CAA------------T------------AT--------------------ATCCAAGAGGCAGACTT-GTCTTGGCAACC----TGTTGAGATTAC-TCCATA-CGTAAAGCCCAA-----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAC----CCATGTAACAA--CGCACA--GCA-------TAATGGAA-------CAATA------AAC----------------AATACACA----------TTGAATA---------CGTG------TAA-GCCAAAAC-ATTAAGGTGTA----AACTCCATTT-GCTTCCA-----------------------C----GACC-CCC------AAGAGT-AAGGA----------CG--G-ATA---A-TATTTTGCATTGTCATGTGCGASizeHit CountTotal NormTotal
No Reads
droFic1
CAA------------T------------AT--------------------ATCCCAGAGGCAAATTC-TTCTTAGCAAGC----TGTTGAGATTAC-TCCGTA-CGTAAAGCCCAAA----------------------AC----ATATATCGATATTATCGA-------------------------------------------CTAGATTTAGAAGTAC-----AAAC----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------AATATACA----------------------------TG------TAATGCCAAAAC-ATTGAGATGTA----AACTCCATTTCGCTTCCC-----------------------A----ATTT-CCC------TAGAGG-AAAGA----------CG--A-ATG---A-TTTTTTGCATTGTCTTGTGCGASizeHit CountTotal NormTotal
No Reads
droKik1
TTA------------GCTACCTAAATATAT--------------------ATCCAG-------------------------------------------CGTA-CGGAAAGCCCCAAAA------CACACAAAACACAC--ATACATATATCGATATTATCGA-------------------------------------------CTAGATATAGAAGTAC-----AAACTGGCCCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AAC----------------TATTTACACACATTATC-T-----------------TG------TACT------CC-ACTGAGTATG----------TATTTCGCTTTCG-----------------------C----GATC-CCC------CAGAGG-AAGGA--------------G-GCA---A-CATTTGGCATTGTCTTGTGCGASizeHit CountTotal NormTotal
No Reads
droAna3
CAA------------T------------TT--------------------ATCCAAGAGGCCGATTATTCCATAGCAACC----TGTTGAGATTAT-ACCATAATGTAATGCCGAAA----------------------ACATACATATATCGATATTATCGA-------------------------------------------CTAGAGTTAGAAGTAC-----AAAA----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AACATAA---TGGAAA---CATATACA----------TTGTC-AGTTTGTCAGTTTG------TAATGCCAAACC-ATTGAGACTCA----AAC------TCGCTTG--------------AT-----CACTC----GCT--CCC------GGGAGGTAATGA----------GG--G-ACA---A-TACTTTGCATTGTCTTGCACGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................TTAGAAGTAC-----AAAA----CCATGTA...................................................................................................................................................................................................................................................................2112.002000002
CAA------------T------------TT--------------------ATCCAAGAGGCCGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................CGCTTG--------------AT-----CACTC----GCT--CCC------GG........................................................2111.001100000
.......................................................................................................................................................CGATATTATCGA-------------------------------------------CTAGAGTT...............................................................................................................................................................................................................................................................................................2011.001000001
............................................................CCGATTATTCCATAGCAACC----T................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droBip1
CAA------------T------------TT--------------------ATCCAAGAGGCCGATT---CCATAGCAACC----TGTTGAGATTAT-AACATA-TGTAATGCCGGT-----------------------AT-----TGTATCGATATTATCGA-------------------------------------------CTAGAGTTAGAAGTAC-----AAA-----CCATGTAACAA--CGCACA--ACA-------TAATGGAA-------CAATA------AACATAA---TGGAA-AACAATATACA----------ATGACCA---------TTTG------TAATGCCAAATCGATTGAG----------ACTCCAACTGGCTGG--------------AT-----CACTCC---AGCC-ACC------GGGCGGTAATGA----------GA--G-GCA---A-TATTTTGCATTGTCTTGCACGASizeHit CountTotal NormTotal
No Reads
dp5
GCA------------TTCACCTAA----------TT-------CCTACCC-CTCAAGAGGCAAATT---TCTTACCAACATAAATGTTGAGTTTATATATATA-CGTGAAGCCCTATAGCCGTACTATATAGAGTATCA--ACATATATATCGATTGTATTGA-------------------------------------------ATAGTTTTAGAAGTAG-----AACA----CATCGT--------GTAAA--ACA-------TAACCGAA-------CAATA------AAT---------------------ACA---------TTTGAATA---------CATG------TAATGCCCAAT--------------------------TCGCAT-----------------TTTTCCTTTTGATAGATCCTCCCTCCATACCTGG-ATTGATAGAACAGACTCCAT-ATG---AGTATATCGCAGCGTCTTGCACGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................TCACCTAA----------TT-------CCTACCC-CTCAAGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGCAGCGTCTTGCACGA2111.0010000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATATCGCAGCGTCTTGC....2011.0010000001000
......................................................................................................................................................................................................................AGAAGTAG-----AACA----CATCGT--------GT..........................................................................................................................................................................................................................................................2011.0010000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATATCGCAGCGTCTTGCA...2111.0010100000000
..........................................................................................................................................................TTGTATTGA-------------------------------------------ATAGTTTTAGAAGT.........................................................................................................................................................................................................................................................................................2311.0010100000000
.............................................................................................TATATATATA-CGTGAAGCCCTATAGCCG...........................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
......................................................................................................................................................TCGATTGTATTGA-------------------------------------------ATAGTTT................................................................................................................................................................................................................................................................................................2011.0010000000010
...................................................................................................TATA-CGTGAAGCCCTATAGCCGTAC........................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
............................................................................................................AAGCCCTATAGCCGTACTATATAGA................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..........................................................................................................................................................................................................................................................................................................................................TGAATA---------CATG------TAATGCCCAAT--------------------------.............................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCTGG-ATTGATAGAACAG......................................2111.0010100000000
..........................................................................................................................................A--ACATATATATCGATTGTATTGA-------------------------------------------AT.....................................................................................................................................................................................................................................................................................................2511.0010100000000
droPer2
GCA------------TTCACCTAA----------TA-------CCTACCC-CTCAAGAGGCAAATT---TCTTACCAACATAAATGTTGAGTTTATATATATA-CGTAAAGCCCTATAGCCATACTATATAGAGTATGA--ACATATATATCGATTGTATTGA-------------------------------------------ATAGTTTTAGAGTTAC-----AACA----CATCGTA--------TAAA--ACA-------TAACCGAA-------CAATA------AAT---------------------ACA---------TTTGAATA---------CATG------TAATGCCCAATT--------TG-----------CATTTTTCTTTT------------------------TGATAAATCCTCCCTCTATACCTGG-ATTGATAGAACAGACTCCAT-ATG---AGTATATCGCAGTGTCTTGTACGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................A----------TA-------CCTACCC-CTCAAGAGGCAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
..................................................................................................................TATAGCCATACTATATAGAGTATGA--AA......................................................................................................................................................................................................................................................................................................................................................................2711.001010000
droWil2
CAT------------T-TACC-AA----------TA-------CAAACACATACAAGAGGCCGAAA---TCTCAACAGAC----A--AGAGATAAC-CCAATA-CGTAAAAACTC------------------------------TATTAGAGATATCA--AA-------------------------------------------TTAGTCTTAGAAGTAC-----AAAAC-TCTGATGTAGCAA--CGCACA--ACAACAACAATTATGGAA-------CAATAATAAAG------AT------TA---AATATACA----------------------------TA------C-ATACCGAAA---------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................CAACAGAC----A--AGAGATAAC-C...................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...........................................................................................................................................................................................................................TAC-----AAAAC-TCTGATGTAGCA................................................................................................................................................................................................................................................................2011.00101000
..................................................................................................................C------------------------------TATTAGAGATATCA--AA-------------------------------------------TTA....................................................................................................................................................................................................................................................................................................2011.00100010
droVir3
CTA------------T------------ATCTGACAAAATCAAGCAAACC-CCAGAGAGGCATGTTC-TTAT--------------------------ATTTG-GACAGAGACATAT------------------------------------------------AGATC----------ACCTATACTAGCTTATAGATATTGAATTTGTTTTAGAAGTTAACAGAAAAT------------------------------ATAT-ATATGTAATATCGACCAGTAATTAAA------ACAAT---A-AAAAAAGTATA----------TCATATG-----------AA------AACTGTTGTTGC-CTTGGGATCCA-----------T------TTAA-TGAGCTCTATGATATTGCCTTTC----GACC-CGC------CCGCAA-AACAA----------GA--T-TCC---A-TAGTTCGCTTCACTTTGTGCGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................CCAGTAATTAAA------ACAAT---A-AAAAAAGTAT.......................................................................................................................................................................................2812.002000000000000000000000000020000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................G-----------AA------AACTGTTGTTGC-CTTGGGATCCA-----------T------........................................................................................................2711.001000000000000000000000000010000000000000000000000000000000000000
.....................................................................TAT--------------------------ATTTG-GACAGAGACATAT------------------------------------------------AGATC----------.................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
.................................................................TC-TTAT--------------------------ATTTG-GACAGAGACATAT------------------------------------------------AGA.............................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
.......................................................................T--------------------------ATTTG-GACAGAGACATAT------------------------------------------------AGATC----------ACC..............................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................................................................................................TACTAGCTTATAGATATTGAATTTGTT.................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
..................................................................C-TTAT--------------------------ATTTG-GACAGAGACAT..................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
................................................CC-CCAGAGAGGCATGTTC-TTAT--------------------------ATTT...............................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000001000000000000000000000000
.....................................................................TAT--------------------------ATTTG-GACAGAGACATAT------------------------------------------------................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................AACTGTTGTTGC-CTTGGGATCCA-----------T------T.......................................................................................................2511.001000000000000000000000000000000000000001000000000000000000000000
....................................................................................................TTG-GACAGAGACATAT------------------------------------------------TC..............................................................................................................................................................................................................................................................................................................................................1880.252020000000000000000000000000000000000000000000000000000000000000
droMoj3
CCAATACGAAAACTAT------------ATCTGAAA--ATAGATCAA---ACCCCAGAGGCAAGTTC-TTA--------------------------TACGTA-CATA-----CAT-----------------------AC----ATATGTAGACATAGTCATATAGAT--------------TATAATTACTCATAGATATCAAATATGCTATAGAAATAA-TAAAGAAC------------------------------AAGA-ATATGTAA-------CAGCAATAAAG------ATGAC---A-AAAAGTATATT----------TCGTACT-----------------------------AC-TTTGAATCATTCGCAATCTCCATCTTTCAAC------------------------------CAAT-CTG------GAA-----AGGA----------CA--A-AGG--AA-TAGTTCGCTTTAACTTGTGCGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................ATATGTAA-------CAGCAATAAAG------ATGA.......................................................................................................................................................................................................2311.001100000
.........................................GATCAA---ACCCCAGAGGCAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droGri2
CTA------------T------------ATCTTAAA--A----GAGA---ATCCCAGAGGCACCTAG-GTATAGGCAT-------------------------------------AT------------------------------------------------AAACCTGTGTACGGCAAATTAATTTGCTCATAAAAATTTAATTTGCTTTAGAAGTAAATCGTAAAA----ATATATAATAA--CGCACA--TCT-------ATTAAAAA-------CAAAA----A-AAC----------------AATAAAAG----------AAAATTA---------CATT------TAACAAATAAAA-ATG---GAATC----ATTTTTACTTTGCCGTCACCCAGAAACATGAT--------------AATT-CTC----A-AAGAGA-ATACA----------TA--A-TTC--AG-TAATTCGCATTATTTTCTGCGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................................................................................................................................................ACA--TCT-------ATTAAAAA-------CAAAA----A-AAC----------------AAT...........................................................................................................................................................................................2611.00110

Generated: 05/18/2015 at 07:29 PM