ID:dsi_3038 |
Coordinate:3l:8214691-8214745 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3l_8214557_8214690_+]; CDS [3l_8214557_8214690_+]; CDS [3l_8214746_8214848_+]; exon [3l_8214746_8214936_+]; intron [3l_8214691_8214745_+]
No Repeatable elements found
| ##################################################-------------------------------------------------------################################################## CGTGATAATGTGGAGCACATACTGCCCATCTACAATAGATTCTACGAAATGTAAGCATATATGGGGCTTGTCAGCTTATGCCTAACCATCTTGTATTATTTTTAGTTACTCTGGAGTGCATTTTAGTAAGAATCCCGACAAATACGTCAAGTACA **************************************************(((((((...(((((((.((......)).)))...))))..))).))))......************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
SRR902008 ovaries |
SRR553488 RT_0-2 hours eggs |
M025 embryo |
SRR553487 NRT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
M053 female body |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................TTTACTCTGGAGTGCATTTTAGTAAGAA....................... | 28 | 1 | 1 | 5.00 | 5 | 0 | 2 | 0 | 3 | 0 | 0 | 0 |
| ......................TGCCCATATACAATAGATTCTACGAAA.......................................................................................................... | 27 | 1 | 1 | 3.00 | 3 | 2 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............................................................................................................TCTGGAGTGCATTTTAGTAAGAATC..................... | 25 | 0 | 1 | 3.00 | 3 | 1 | 0 | 0 | 0 | 1 | 0 | 1 |
| ..........................................................................................................TACTCTGGAGTGCATTTTAGTAAGAATCC.................... | 29 | 0 | 1 | 2.00 | 2 | 0 | 0 | 1 | 0 | 1 | 0 | 0 |
| ......................TGCCCATCTACAATAGATTCTACGAAA.......................................................................................................... | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ......................TGCCCATATACAATAGATTCTACGAAATT........................................................................................................ | 29 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................TACTGCCCATATACAATAGATTCTACGA............................................................................................................ | 28 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................................................................TACTCTGGAGTGCATTTTAGTAAGAAT...................... | 27 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................TTTACTCTGGAGTGCATTTTAGTAAGA........................ | 27 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................TTAGTAAGAATCCCGACAAATACGTCAAG.... | 29 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................CCGACAAATACGACAAGGAAA | 21 | 3 | 5 | 0.40 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................TCTGGAGAGCATATTAGAAA.......................... | 20 | 3 | 9 | 0.11 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................CCGACAAATACGACAAGGAA. | 20 | 3 | 9 | 0.11 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................................................TGGATTAATTTTAGTTACT............................................. | 19 | 2 | 12 | 0.08 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
|
GCACTATTACACCTCGTGTATGACGGGTAGATGTTATCTAAGATGCTTTACATTCGTATATACCCCGAACAGTCGAATACGGATTGGTAGAACATAATAAAAATCAATGAGACCTCACGTAAAATCATTCTTAGGGCTGTTTATGCAGTTCATGT
**************************************************(((((((...(((((((.((......)).)))...))))..))).))))......************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|
| .....................GACGGGTAGATGTTATCTAAGATGCTT........................................................................................................... | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 |
| ......................TCGGGTAGATGTTAT...................................................................................................................... | 15 | 1 | 8 | 0.13 | 1 | 0 | 1 |
| ......................................................................................................................................GGCTGTTTATGCTGTTCCTT. | 20 | 3 | 9 | 0.11 | 1 | 1 | 0 |
Generated: 04/24/2015 at 10:45 AM