ID:

dsi_30378

 Coordinate:

2l:14902826-14903136 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-41.6 -41.5 -41.4

Flybase annnotation

five_prime_UTR [2l_14902761_14902872_-]; exon [2l_14902404_14902872_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#################################################################################################
AACAAAAGATATGAACGCAGCGCGCTGAGCTGCTTGACGTCGCCGCCAAGGTTCGAATCAGATATATTCTCGTTGTTTTTCCTTTTTTTTTTATTTTTCTTCCGCCCATTTTTGTGTTGTTTTTAATAAGTTTACAACTTTACAACTGTTTTTTTGTGATTTTTGCACTTTCGTGAGTGCACTTGCGCCAAGTGATTTGTGATTTGCGATTTGCGATTTGCGTGCAGTTGAAGGCGAGGAGAACTGCATTCGATCTTTCCGATCAGCAGTGCCTTGAGATTGCCGCTTTCGAAGTGAACGTTCCGATGTGGAAACCTTAGGCTCGTACTCATGTCTAATTACACAAGCTATTCCCTGGCAGACTAAATCAGCTCTAAATCGGCTCTAAGTAAGAGGAACGTGGTAATTACA
***********************************************************************************************************************************************************************.(((((.(((((((((((...))))))...(((((.((((.....)))).))))).((((((.(((((.......(((((....((((.....)))).))))))))))..))))))))))).)))))......((((.....))))...........*************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 M023
head
 M025
embryo
 SRR902009
testis
 M024
male body		 O001
Testis
 O002
Head
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
............................................................................................................................................................................................................................................................................................................................................................................................GGCTCTTTGTAAGAGGA.............. 17 2 7 20.43 143 143 0 0 0 0 0 0 0 0 0 0 0 0
...............CGCAGCGCGCTGAGCTGCTTGACGTCGCC............................................................................................................................................................................................................................................................................................................................................................................... 29 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
AACAAAAGATATGAACGC......................................................................................................................................................................................................................................................................................................................................................................................................... 18 0 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................CGATGTGGAAACCTTAGGCTC....................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................CTTTCGTGAGTGCACTTGCGC............................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................GATGTGAAAGCCTTCGGCTC....................................................................................... 20 3 9 1.00 9 0 4 0 0 3 0 0 0 0 2 0 0 0
....AAAGATATGAGCGCAGCGCGCTG................................................................................................................................................................................................................................................................................................................................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................................TCTAAGTAAGAGGAACGTGGTAATT... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................................................................AAGAGGAACGTGGTAATTA.. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................CTTTCCGATCAGCAGTGCC.......................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........ATGAACGCAGCGCGCTGAGCT............................................................................................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................................TCTAAGTAAGAGGAACGTGGTAATTACA 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TTTGGATTTTTGTACTTTCGTGAGTGC....................................................................................................................................................................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............ACGCAGCGCGCTGAGCTG........................................................................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................TTCCGATGTGGAAACCTTAGGCTC....................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTGGTTTTAATAAGTGTA..................................................................................................................................................................................................................................................................................... 20 2 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................ATCTTTCCGATCAGCAGC............................................................................................................................................. 18 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................TCCAAGGTTCGAATC................................................................................................................................................................................................................................................................................................................................................................ 15 1 4 0.50 2 0 0 0 0 0 0 0 0 1 0 1 0 0
.............................................................................................................................................................................................................................................................................................................................................................................................GCTCTATGTAAGAGGA.............. 16 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TGTGATTTGCGATTT....................................................................................................................................................................................................... 15 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................................................................GTGAGAGGTACGTGGTA...... 17 2 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................TATGTTTTCGTTGTTGTTCCTT....................................................................................................................................................................................................................................................................................................................................... 22 3 11 0.18 2 0 0 0 0 0 0 0 0 0 0 0 2 0
............................................................................................................................................................................................................................................................................................................................................................................................TGCTCTCAGTAAGAGGA.............. 17 2 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................CCCAAGGTTCGAATC................................................................................................................................................................................................................................................................................................................................................................ 15 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................ATTTGATCTTTCTGATTAGC................................................................................................................................................ 20 3 12 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................CCGCCAGGGTTCGAA.................................................................................................................................................................................................................................................................................................................................................................. 15 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................CTGCCGGACGTCGGCGCCA........................................................................................................................................................................................................................................................................................................................................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0
................................CTGGACGTCGCCGCC............................................................................................................................................................................................................................................................................................................................................................................ 15 1 15 0.07 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................TGTTGGTTTTAATAAG......................................................................................................................................................................................................................................................................................... 16 1 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TATCTCGTTGATTTTCCTTTTT.................................................................................................................................................................................................................................................................................................................................... 22 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................TTACAACTTGATAACTGATT.................................................................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

TTGTTTTCTATACTTGCGTCGCGCGACTCGACGAACTGCAGCGGCGGTTCCAAGCTTAGTCTATATAAGAGCAACAAAAAGGAAAAAAAAAATAAAAAGAAGGCGGGTAAAAACACAACAAAAATTATTCAAATGTTGAAATGTTGACAAAAAAACACTAAAAACGTGAAAGCACTCACGTGAACGCGGTTCACTAAACACTAAACGCTAAACGCTAAACGCACGTCAACTTCCGCTCCTCTTGACGTAAGCTAGAAAGGCTAGTCGTCACGGAACTCTAACGGCGAAAGCTTCACTTGCAAGGCTACACCTTTGGAATCCGAGCATGAGTACAGATTAATGTGTTCGATAAGGGACCGTCTGATTTAGTCGAGATTTAGCCGAGATTCATTCTCCTTGCACCATTAATGT
***************************************************************************************.(((((.(((((((((((...))))))...(((((.((((.....)))).))))).((((((.(((((.......(((((....((((.....)))).))))))))))..))))))))))).)))))......((((.....))))...........*********************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 M023
head
 SRR902008
ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 M025
embryo
...................................................................................................................................................................................GTGAACGCGGTTCACTAA...................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................GAAAGGCTAGTCGTCACG........................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0
...........ACTTGCGTCTCGCGAGTCGAA........................................................................................................................................................................................................................................................................................................................................................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................AAGTTTCATTTGCAAGGCT......................................................................................................... 19 2 2 0.50 1 0 1 0 0 0 0 0 0
.......................................................................................................................AAAATATATTCAGATGTTGAAAT............................................................................................................................................................................................................................................................................. 23 3 2 0.50 1 0 0 1 0 0 0 0 0
....................................................................................AAAAAAAAAAAAAAGAAGTCGGGT............................................................................................................................................................................................................................................................................................................... 24 2 3 0.33 1 0 1 0 0 0 0 0 0
......................................................................................AAAAAATAACAAGAAGACTGGT............................................................................................................................................................................................................................................................................................................... 22 3 5 0.20 1 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................................................................................AAGTTTCATTTGCAAGGC.......................................................................................................... 18 2 10 0.20 2 0 0 2 0 0 0 0 0
......................................................................................................................................................................................................................CTAAACGCAAGTCAAC..................................................................................................................................................................................... 16 1 6 0.17 1 0 0 1 0 0 0 0 0
........................................GCGGCGGTTGCAAGC.................................................................................................................................................................................................................................................................................................................................................................... 15 1 13 0.15 2 0 2 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................TCCCTTGCAAGGCTA........................................................................................................ 15 1 8 0.13 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................AAGTTTCATTTGCAAGGCTG........................................................................................................ 20 3 9 0.11 1 0 0 1 0 0 0 0 0
........................................................................AACAAAATGGAAAAAAAAAA............................................................................................................................................................................................................................................................................................................................... 20 1 10 0.10 1 0 0 0 0 0 0 1 0
................................GAACTGCAGCAGCGG............................................................................................................................................................................................................................................................................................................................................................................ 15 1 10 0.10 1 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................AGTCCTTTGGAATCCG......................................................................................... 16 2 20 0.10 2 0 0 0 0 0 2 0 0
....................................................AGCTTAGTCGATATAGGGG.................................................................................................................................................................................................................................................................................................................................................... 19 3 12 0.08 1 0 0 0 0 0 0 0 1
..............................................................................................AAAAGAAGGCTGGTGAAAA.......................................................................................................................................................................................................................................................................................................... 19 2 13 0.08 1 0 0 1 0 0 0 0 0
..............................................................................................AAAATAAGGCGGCTAAAAA.......................................................................................................................................................................................................................................................................................................... 19 2 14 0.07 1 0 0 0 0 0 1 0 0
..................................................................................AAAAAAAAAAAACAAAAAAGGCGGGT............................................................................................................................................................................................................................................................................................................... 26 3 18 0.06 1 0 0 0 0 1 0 0 0
...........ACTTGCTTCGCGCGAT................................................................................................................................................................................................................................................................................................................................................................................................ 16 2 19 0.05 1 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................ACCCTTGCAAGGCTACA...................................................................................................... 17 2 19 0.05 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................AACGCTAAACGCTAAATATA............................................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 1 0 0 0
.................................................CCAAGGTTAGTGTATAT......................................................................................................................................................................................................................................................................................................................................................... 17 2 20 0.05 1 1 0 0 0 0 0 0 0
.........................................CGGCGGTTGCAAGCAT.................................................................................................................................................................................................................................................................................................................................................................. 16 2 20 0.05 1 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:14902776-14903186 - dsi_30378 AACAAAAGATATGAACGCAGCGC-GCTGA--------------------------------------------GCT------GC--TTGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATATT------------------------------------------------------CTCGTTGTTTTTCCTTTTTTTTTTATT-TT-------TCTTCCGCCCAT------------------------------------TTT-TGTGTT--GTTT-TTAATAAGTTTACAACT-TTACAA--CTGTT-----TTT--TTGTGA-----TT-------------------------------------------------------TTTG----------------------------------CACTTTCGTGAGTG---------------------CACTTG-CGCCAAGTGATTTGT-------GATTTGCGATTTG-CGAT------TTGCGTGC---------------------------A-----------------GTT-G--AAGGCGAGGAG--AACTGCAT------TCGA-------------------------------------------------------------TCTTTCCGATCAGCAGTGCCTTG-AGATTGCCGCTTTCGAAGTGAACGTTCCGATGTGGA--AACCTTAGGCTCGTACTCAT-GTCTAATTACACAAGCTA--TTCCC-------TGG--CA--------------------------------GACTAAATC-------------------AGCT----CTAAATCGGCT---CTAAG-------------------------------------------------TAA-GAGGA---ACGTGGTAATTA-----CA
droSec2 scaffold_3:1525843-1526255 - GACAAAAGATATGAACGCAGCGC-GCTGA--------------------------------------------GCT------GC--TTGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATATTC-T---------------------------------------------------CTCGTTGTTTTTCCTTTT-TTTTTATT-TT-------TCTTCCGCCCAT------------------------------------TTT-TGTGTT--GTTT-TTAATAAGTTTACAACT-TTACAA--CTGTT-----TTTTTTTGTGA-----TT-------------------------------------------------------TTTG----------------------------------TACTTTCGTGAGTG---------------------CACTTG-CGCCAAGTGATTTGT-------GATTTGCGATTTG-TGAT------TTGCGTGC---------------------------A-----------------GTT-G--AAGGCGAGGAG--AACTGCAT------TCGA-------------------------------------------------------------TCTTT-CGATCAGCAGTGCCTTG-AGATTGCCGTTTTCGAAGTGAACGTTCCGATGTGGA--AACCTTAAGCTCGTACTCAT-GTCTAATTACACAAGCTA--TTCCC-------TGG--CA--------------------------------GACTAAATC-------------------AGCT----CCAAATCGGCT---CTAAG-------------------------------------------------TAA-GAGGA---ACGTGGTAATTA-----CA
dm3 chr2L:15264142-15264513 - AACAAAAGATATGAACGCAGCGC-GCTGA--------------------------------------------GCT------GCTCTTGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATATTT-TCTCT----AT------------------------------------------------------------TTTTTATTTTT-------TTTTCCGCCCAT------------------------------------TTT-TGTGTT--GTTT-TTAATAAGCTTACAACT-TTACAA--GTGTT-----TTTTGTTGTGA-----TT-------------------------------------------------------TTTG----------------------------------TACTTTCGTGAGTGATTTGTGAT-------------TT----------GC-----------------------------GAT------TTGCGTGC---------------------------A-----------------GTT-G--AAGGCGAGGAG--AACTGCAT------TCGA-------------------------------------------------------------TCTTTCCGATCAGCAGTGCCTTG-AGATTGCCGCTTTCGAAGTGAACGTTTCGATGTAGA--AACCTTAAAGTCATACTCAT-GTCTAATTACACAAGCTA--TTCCC-------TGG--CC--------------------------------GACTAAATC-------------------AGCT----CTTAG---------------------------------------------------------------TAAGAAGA----ACGTGGTAATTA-----CA
droEre2 scaffold_4929:7008995-7009425 - AACAAAAGATATGAACGCAGCGC----------------------------------------------------------------TGACGTCGCCGCCGCCAAGGTTC-------------------GAATCA-GA----TATATCTTGTCGTTTTA--------------------------------------------------------------------------------CTTTCCGCCCAT------------------------------------TTT-TGTGTTTTGTTT-TTAATAAGTTTACAACT-TTACAA--GTGTGGT------------GA-----TT---TTTTGTTTTTCGTT-----------CT---------------------------------------------------------------TACTTTCGTG-------TGTG--------------CATTTT-CGCCAAGT-----------------------------GAT------TTGCGTGC---------------------------A-----------------GCT-C--AAGGGGAGGAG--AACTGCAT------TCGAGGCCCTCGCG----------------------------------------CTCC---CCGATCTTTCCGATCAGCAGTGCCTTG-AGATTGCCGCTTTCGAAGTGAACGTTCCGATGTGGA--AACCTTA------TACTCAT-GTCTAATTACACAAGCTATATTCCC-------TGGCGCA--------------------------------GACTAAATC-------------------AGCT----CTAAAGCGGG---CATAAGAGCTCGAA-AA-TTTATTGCTATCCGGTCATAAATTTTGGAA-----CGGAAGTAGGA----CGTTGTAGTTG-----AA
droYak3 2L:20066405-20066838 + AACAAAAGATATGAACGCAGCGC----------------------------------------------------------------TGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATATTT-T-TTT----GT-----------------TTTT-TTTTTT--------TTTCA----GTTTTT---------------TT---TCCGTTTTTTTTCGCCCAT------------------------------------TTT-TGTGTT--GTTT-TTTATAAGTTTACAACT-TTACAA--CTGCTGT------------GA-----TT-------------------------------------------------------TTT-----------------------------------TACTTTCGTGAGTG---------------------CATTTT-CGCAAAGT-----------------------------GAT------TTGCGTGC---------------------------A-----------------GTT-C--AAGGGGAGGAG--AACTGCAT------TCGAGGCCCTCGCG------------------------------------------CC---CCGATCTTTCCGATCAGCAGTGCCTTG-AGATTGCCGCTTTCGAAGTGAACGTTCTGATGTGGA--AACCTTT------TACTCAT-GTCTAATTACACAAGCTA--TTACC-------TGG--CA--------------------------------GACTAAATC-------------------AGCT----CTAAATCGGGGC-CATAAGAGCTCGAA-AA-TTTAATGCTATCCGGCCACACCTATAGGAA-----CGGAAGAAGGA----CGCTGTAGTTG------A
droEug1 scf7180000409231:169326-169721 - AACAAAAGATATGAACGCAGTGC----------------------------------------------------------------TGACGTCG---CCGCCAGGGTTT-------------------GAATCA-GA----TATTA-TATTT----------------------------------------------------------------------------------------TTCAGTCAAT------------------------------------TTC-TGTGTT--GTTTTTTGATAACTTTACAACT-TTACAA--CTGTTGT------------G----------------TTATTTTCT-----------------------------------------------------------------------TGATTTT-TTTTGTG-------TGTGAT-------------TTTTG-TGCCTAGT-----------------------------GAT------TTGCGTGC---------------------------A-----------------CTT-C--AAGGGGAGGAG--AACTGCAT------TCGAGGCCCTCAC------------------------------------------TTT---ACAATCTTTCCGATCAGCAGTGCCTTG-AGATTGCCGCTCGCAAAGTGAACGTTCCGATGTGAA--AGCTTCG------TACACAT-GTCTAATTACACAAGCTA--ATCCC-------AGC--CA--------------------------------GACTAAATC-------------------AGAT----CTAAATCGGCAT-CGTAAGAATTGGAA-AA-TTTAATGCAATC----------AGTTGGAA-----CGGAAGGAGGA-------AGTAGTTA-----AA
droBia1 scf7180000302261:1312710-1313126 + AACAAAAGATATGAACGCAGCGC----------------------------------------------------------------TGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATTA-TATTTTT----GCC------------C--CGT---------------------------------------------------------TTTTTTTCGCCCAT------------------------------------TTC-TGGGTT--GTTT-CTGATAAGTTTACAACT--TACAACGCGGTTGT------------GATTTGATTTTTTCCTGTGGGCT---------------------------------------------------------------------------------------TG-------TGTGAC-------------TTT----GCCAAGC-----------------------------GAT------TTGCGTGC---------------------------A-----------------CCT-C--AAGGGGAGGAG--AACTGCAT------TCGCGGCCCCTG----GC-------------------------------------TCTCCGCCGATCTTTCCGATCAGCAGTGCCTTG-AGATTGCCGCTCGCCAAGTGAACGTTCCGACGTGGA--AACCTTA------TACACAT-GTCTAACTACACAAGCTA--ATCCC-------AGC--CA--------------------------------GACCAAATC-------------------AGCC----TTGAATCGGCAG-CTCAGGAACCCGACTAA-CTTAATGCTAGCCCGCTGCTCCAGTTGGCA-----CGGAAGGAGGA-------AGTAG----------
droTak1 scf7180000415438:111529-111935 - AACAAAAGATATGAACGCAGCGC----------------------------------------------------------------TGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATTA-TATTT----------------------------------------------------------------------------------------TTTCGCCCAT--------------------TTTTGTCTGCGTTGTTTTT-CGT------TTT-TTGATAAGTTTACAACT-TTACAA--CTGTG--------------------------TTCTGT---------------------ATTTTTTTT--T--------------------------------------------------------TGGTG-------TCTGAT-------------TTTT--TTCCAAGT-----------------------------GAT------TTGCGTGC---------------------------A-----------------CTT-C--AAGGGGAGGAG--AACTGCAT------TCGAGGTTCCCA----GCA-------------------------------GCAGCTCT---CCGATCTTTTCGATCAGCAGTGCCTTG-AGATAGCCGCTCTCGAAGTGAACGTTCCGATGTGGA--AACCTTA------TACACAT-GTCTAATTACACAAGCTA--ATCCCGTAAACTAGC-CCA--------------------------------GACTAAATC-------------------AGCC----TTAAATCGGCAG-CCTAAGAACTCGGA-T--------------AC-------CAGTTGGAACGGAACGGAAGGAGGA-------AGTAG---------A
droEle1 scf7180000491028:770996-771376 + AACAAAAGATATGAACGCAGCGC-A-------------------------------------------------------------CTGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATTA-TATTTTA----TTT------------T--CTT---T----------------------------------------------TT-------TTTTTCGCCCAT------------------------------------TTTGAGTGTT--GTTTTTTGATAAGTTTACAACTTTTACAA--CTCATGTGTTTT------------------------------------------------------------------------T------------------CTGTTCGAGTG-------------AGTG-------AGTGAT-------------TTTTT-GGCCAAGT-----------------------------GAT------TTGAA-----------------------------------------------------------------------TGCAT------TC---------------------------------------------------------------TCTTTCCGATCAGCAGTGCCTTG-AGATTGCCGCTCTCGAAGTGAACGTTCCGATGTGGA--AACCATA------TACACAT-GTCTAACTACGCCAGCTA--ATCCC-------AGC--CA--------------------------------GACTAGATC-------------------AGCC----TTAAATCGGCCGCCATAAGAACTCGCG-AT-TTGAATGCCATCACG------CAGTGGGAA-----CGGAAGGAGGA-------AGTAGTTGTCGAAAA
droRho1 scf7180000780250:4039-4441 - AACAAAAGATATGAACGCAGCGC----------------------------------------------------------------TGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATTA-TTTTTTT----TTC------------G--CAT---T----------------------------------------------TT-------TTTTCCAACCAT------------------------------------TTT-AGTGTT--GTTTTTTGATAAGTTTACAACTTTTACAA--CTGTTGT------------G----------------T---------------------ATTTTTTTTTTG--------------------------------------------------------TCGTG-------AGTGAT-------------TTTTC-GGCCAAGT-----------------------------GAT------TTGCGTGC---------------------------G-----------------GTT-G--AAGGGGAGGAG--AACTGCAT------TCGAGGCCCTCAC----------------------------------------------------TCTTTCCGATCAGCAGTGCCTTG-AGATTGCCGCTCTCGAAGTGAACGTTCCGATGTGGA--AACCTTA------TACACAT-GTCTAATTACACAAGCTA--ATCCC-------AGC--TG--------------------------------AACTAAATC-------------------GGCT----TTAAATCGGCAG-CATAAGAACTCGAA-AA-TTTAATGATATCTCG------CAGTTGGAA-----CGGAAGGAGGA-------AGTAGTCG-----AA
droFic1 scf7180000454087:295980-296405 + AACAAAAGATATGAACGCAGCGC----------------------------------------------------------------TGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATAA-TATTATT----TTT----------------------------------------TTCGTT----TTCGTTTT-T-----TTTTT-------TTTTTCGCCCAT------------------------------------TTT-TGTGTT--GTTT-TTGATAAGTTTACAACT-TTACAA--CTGTTGT------------TGTG------AGTTCTGTTTTTTTTT-----------T----------------------------------------------------------------T-----------------------ATTTTGTGTGGTTTTTT-TGCGAAGT-----------------------------GAT------TTGCGTGC---------------------------A-----------------CTT-C--AAGGGGAGGAG--AACTGCAT------TCGAGGCCCTCGCT------------------------------------------C--------TCTTTCCGATCAGCAGTGCCTTG-AGTTTGCCGCTCTCGAAGTGAACGTTCCGATGTGGA--AACCTTA------GACACAT-GTCGAATTACACAAGCCA--ATCCC-------AGC--CA--------------------------------GACTAAATC-------------------GGCT----TTAAGTCATAAGGCGTAAGAACTCGTA-AA-TTTAATGCAATCCCG------CAGAGGAAA-----CGGAAGGAGGA-------CGTAGTTG-----TA
droKik1 scf7180000302389:330208-330565 - AACAAAAGATATGAACGCAGTGC----------------------------------------------------------------TGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATTA-TATTTTT----TGC----------------TTTT-TTTGTT--------GTTAA----TTTTTT---GCTGTTGTTCTGTT-TC----------------------------------------------------------------T--GTTT-TCCATAAACTTACAACT-TTACAA--CTTTTT--------------------------GGTGG---------------------CGTTTTTTT--T--------------------------------------------------------TTATT-------TGTGAC-------------TTTTT-CGCGTAGT-----------------------------GAT------TTGCGTGC---------------------------A-----------------CCT-C--AAGGGGAGGAG--AACTGCAT------CCGAGGCCCTCTC----------------------------------------------------TCTTTCGGATCAGCAGTGCCTTG-AGATTGCCGCTCTCGAAGTGAACGTTCCGATGT--------------------------GTCTAATTACACAAGCTT--TT-----------GG--A------------------------------------AAAATC-------------------AACC----C---------------------------------AATGACAGTCTA-------AGCTGAAG-------ATA-GAGGAAAAACGACTTGATTA------A
droAna3 scaffold_12916:7565325-7565796 - AACAAAAGATATGAAAGCAGCGC----------------------------------------------------------------TGACGTTG---CCGCCAAGGTTC-------------------AAATCG-GA----TATTA-AATTTGT----TTT------------TCGTGTTT-TTTTTT--------TTTCA----TTGTTTTTTGTTGTTTATTTATT-TT--G--------------AT------------------------------------TTT-TCGGTT----------------------------------------------------------------------------------------------------TTGTTTTGATAAAATT--TATAAAGAATTTTTACATGTGTAGGA---------------TTGGG-------TGTGAT-------------TTTGAATTCAAAGC-----------------------------GAT------TTGCGTGC---------------------------A-----------------CCT-TACAAGGTGCAGTT--CTCCGCAC------TCGAGGCCCGAGATCGGCA-------------------------------TC------------------AGCATCAGCGGTGCCTTG-AGATTGCCACTCTCAAAGTGAACGTTCCGATGTGGA--AACCTTA------TACACAT-GTCTTATTACACAAGCTC--C---T-------GTC--CAGATCAGATACAAATTCAAAAATTTGTAAACAAAA---ATTGTAAAAAATAGAA-AATCCCAACCCTCTCT-------GAC-CAT-CGAACTGGAA-CATTTTAATGGTGATCCG-------AGTTGAAA-----GGGAAGACGG----AGGACGTAGCTG-----AA
droBip1 scf7180000396554:181811-182269 - AACAAAAGATATGAACGCAGCGC----------------------------------------------------------------TGACGTTG---CCGCCAAGGTTC-------------------AAATCG-GA----TATTA-AATTTGT----TTT------------GCGTGTTTT-------------------TTCATTGTTTTTTCTTGTTTATTTATT-TT--GATTTTTTTTCG-----------------------------------------------GG-T----------------------------------------------------------------------------------------------------TTGTTGTGATAAAATTTTTGTAAA-AATTTTTACATGTGTAGGA---------------TTTGG-------TGTGAT-------------TTTGAATTCAAAGC-----------------------------GAT------TTGCGTGC---------------------------A-----------------CCT-TACAAGGT--GCAGTTCTCCGCACTGCCGTGCGAGGCCCG-------------------------------------------------------------AGATCAGCGGTGCCTTG-AGATTGCCACTCTCGAAGTGAACGTTCCGATGTGGA--AACCTTA------TACACAT-GTCTAATTACACAAGCTC--C---T-------GTC--CGGATCAGATACAAATTCAAAAAT-TATAAACAAAA---ATCAAAAAAAAAAAAAGAATAGCAACCCT--CT-------GAC-CAT-CGAATTGGAA-AATTTTAATGGTGATCCG-------AGTTGAAA-----GTTCAGGAAGA-------CGCAGCTG-----AA
dp5 4_group4:2534760-2535041 + AACAAAAGATATGAACGCAACGCAGCCGC--------------------------------------------GTT------GCCGCTGACGTCG---CTGCCAAGGTTCGTCTGGGCAGCGCTCTGGCGAATCG-GA----TACTA-TAGTAGTATTATTTTCAGAGCAGAGC----TT------TTTCTTAGCGT-----------------------------------TTCGTTTCGTTTCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCTC--TG-------TGCTGAT------TTGCGTGCGTGTGGAGTCGTGTGCTCGTAGAGCTGA-----------------CCT-T---AGGAGCGGAA--AACTGCAC------CTGA------------------------------------------------------------ATCTCGCCCATCAGCAGTGCCTTG-AGATT-CCACTTTCCAAGTGAACGTT-CGATCTCGA--AAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_10:1544487-1544768 + AACAAAAGATATGAACGCAACGCAGCCGC--------------------------------------------GTT------GCCGCTGACGTCG---CTGCCAAGGTTCGTCTGGGCAGCGCTCTGGCGAATCG-GA----TACTA-TAGTAGTATTATTTTCAGAGCAGAGC----TT------TTTCTTAGCGT-----------------------------------TTCGTTTCGTTTCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCTC--TG-------TGCTGAT------TTGCGTGCGTGTGGAGTCGTGTGCTCGTAGAGCTGA-----------------CCT-T---AGGAGCGGAA--AACTGCAC------CTGA------------------------------------------------------------ATCTCGCCCATCAGCAGTGCCTTG-AGATT-CCACTTTCCAAGTGAACGTT-CGATCTCGA--AAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004577:1906115-1906287 + AACAAAAGATATGAACGCAACGTTG---C-GTTGACGTTGACGTTGTCGT---------------------------------T--TTGAAGTCG---CTGCCAAGGTTT-------------------TAATTT-TA----TGTTT-TTTTT---------------------TCCCGA-----------------------------------------------------------------TTTAAT------------------------------------TTT-TGCG---------------------------------------------------------------------TGTAAAGTTAAGTGACCTTTTT--GTTTTATTATTG-------------TT------------------TTGTTCGATTTGTTGATTTAGTTTAGTGAGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12963:11914585-11914913 - AACAAAAGATATGAACACGCCGCCGCCG---TCTCCGTCTCCGTCGCCGTCTCAGTCGCCGTCTCAGTCG-CAGTC------GCAGTCAGCGTCG---CTGCCAAGGTTCGCTTGAACGT----TAGGCGAATCGAAATACATATAA-TTTTTTT----GTTT-----------C--CGA-----TTTT------------------------------------------------------------------ATTAACATTTGTTGCTTTCTGTTTTTGTTGATTTT-TGTATTTCATTT-TT-------------CT-TTTTAA--ATTTTAT------------TT--------TTTTCTGTTTTTTTTT-----------T----------------------------------------------------------------T-----------------------TTTTTTTA------------------------TAATTTTTATTT-------TGTTGTTTAACGGTTGCGTG--TGTAAAGTTA-G------------TGACCTTAGT--GAATCGTGATT-T--ACAGTGAGGAA--AACTGCAT------TTGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:20618121-20618557 - AACAAAAGATATGAACACGCCGACGCCGCAGTCGCCGTCGTCGTCGCCGTCGCAGTCGCAGACTCAGCCCAC-AAC------GACGTCAGCGTCG---CAGCCAAGGTTCGCCTGAACGT----TAGGTGAATCG-AATA---AATA-TATTTTT----TTT------------C--CGA---TTTTTT------------------------------------------------------------------ATTAACATTTGT------------------------TGCGTT------------------GCACCG-TTGTTA--TTGTT---------------------------ATTGTTTTTTTTT-----------T----------------------------------------------------------------T-----------------------TTTT------------T------------------------------------------AACGGTTGCGTG--TGTAAAGTTA-G------------TGACCTTAGAGTGAAGTGTGATTTC--GCAGTGAGGAA--AACTGCAT------TTGTGTGTTTTG----GAATTGAAATCGAATCGAATCGTAGCAGGCCCAGAC------------------GGCATTAGCAATGCCTTGGAGACTGTCTCCAT------TCACTTTTTGATCCGAACCAGACTAG------AACACTTGGCCTAATTACACAAGCGA--TTCTA-------GGC--TA--------------------------------AA---ATTC-------------------AACA----ACAAATTGGCAT---T----------------------------------------------------------------------------------A
droGri2 scaffold_15126:5458910-5459216 - AACAAAAGATATGAACACGCCGCCGACACCGACGCCGACGCCGACTCTGCCGCA-------------------GTCACTTTCAACGCCAGCGTCG---TTGCCAAGGTTCGCTTGAACGT----TAGACGAATTGAAA----TATAA-TTTTT-------------------------------------------------TTCATTTTTTTCCGT--------------------TTTTTTTTT-CAATTTTTATTAACATTTGTTGCT-----------------------GT---------------------TACT-CGATGA--TTGTTGT------------TATG------T-TTTTGTTTTCTGTT-----------T----------------------------------------------------------------T--------------------CTTTTTTTGTGTTGTATTTT------------------------------------------AACGGTTGCGTG--TGTAAAGTTA-G------------TGACCTTAGA--AAAGCGTGATT-T--ACAGTGAGGAA--AACTGCAT------TTGGAGTCTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AACAAAAGATATGAACGCAGCGC-GCTGA--------------------------------------------GCT------GC--TTGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATATT------------------------------------------------------CTCGTTGTTTTTCCTTTTTTTTTTATT-TT-------TCTTCCGCCCAT------------------------------------TTT-TGTGTT--GTTT-TTAATAAGTTTACAACT-TTACAA--CTGTT-----TTT--TTGTGA-----TT-------------------------------------------------------TTTG----------------------------------CACTTTCGTGAGTG---------------------CACTTG-CGCCAAGTGATTTGT-------GATTTGCGATTTG-CGAT------TTGCGTGC---------------------------A-----------------GTT-G--AAGGCGAGGAG--AACTGCAT------TCGA-------------------------------------------------------------TCTTTCCGATCAGCAGTGCCTTG-AGATTGCCGCTTTCGAAGTGAACGTTCCGATGTGGA--AACCTTAGGCTCGTACTCAT-GTCTAATTACACAAGCTA--TTCCC-------TGG--CA--------------------------------GACTAAATC-------------------AGCT----CTAAATCGGCT---CTAAG-------------------------------------------------TAA-GAGGA---ACGTGGTAATTA-----CASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............CGCAGCGC-GCTGA--------------------------------------------GCT------GC--TTGACGTCG---CC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.00300300000000000000
AACAAAAGATATGAACGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200001100000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGTGGA--AACCTTAGGCTC.......................................................................................................................................................................................................................2111.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCGTGAGTG---------------------CACTTG-CGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---CTAAG-------------------------------------------------TAA-GAGGA---ACGTGGTAATT........2511.00100000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-GAGGA---ACGTGGTAATTA-----..1911.00100000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCGATCAGCAGTGCC.............................................................................................................................................................................................................................................................................1911.00101000000000000000
..........ATGAACGCAGCGC-GCTGA--------------------------------------------GCT------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---CTAAG-------------------------------------------------TAA-GAGGA---ACGTGGTAATTA-----CA2811.00100000001000000000
..............ACGCAGCGC-GCTGA--------------------------------------------GCT------G.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGATGTGGA--AACCTTAGGCTC.......................................................................................................................................................................................................................2411.00100000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------------------------------------TCTTTCCGATCAGCAGC................................................................................................................................................................................................................................................................................1820.50100100000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT-------GATTTGCGATTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1530.33100000001000000000
droSec2
GACAAAAGATATGAACGCAGCGC-GCTGA--------------------------------------------GCT------GC--TTGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATATTC-T---------------------------------------------------CTCGTTGTTTTTCCTTTT-TTTTTATT-TT-------TCTTCCGCCCAT------------------------------------TTT-TGTGTT--GTTT-TTAATAAGTTTACAACT-TTACAA--CTGTT-----TTTTTTTGTGA-----TT-------------------------------------------------------TTTG----------------------------------TACTTTCGTGAGTG---------------------CACTTG-CGCCAAGTGATTTGT-------GATTTGCGATTTG-TGAT------TTGCGTGC---------------------------A-----------------GTT-G--AAGGCGAGGAG--AACTGCAT------TCGA-------------------------------------------------------------TCTTT-CGATCAGCAGTGCCTTG-AGATTGCCGTTTTCGAAGTGAACGTTCCGATGTGGA--AACCTTAAGCTCGTACTCAT-GTCTAATTACACAAGCTA--TTCCC-------TGG--CA--------------------------------GACTAAATC-------------------AGCT----CCAAATCGGCT---CTAAG-------------------------------------------------TAA-GAGGA---ACGTGGTAATTA-----CASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACGTTCCGATGTGGA--...................................................................................................................................................................................................................................1912.0020020
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTT-CGATCAGCAGTGCCTTG-AGATTGCC.................................................................................................................................................................................................................................................................2911.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGTGATTTGT-------GATTTGCGATTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGGA--AACCTTAAGCTC.......................................................................................................................................................................................................................2011.0011000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTG-TGAT------TTGCGTGC---------------------------A-----------------GTT-G--AAG..........................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTG-TGAT------TTGCGTGC---------------------------A-----------------GTT-G--AAGG.........................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGGAG--AACTGCAT------TCGA-------------------------------------------------------------T................................................................................................................................................................................................................................................................................................2111.0011000
....AAAGATATGAACGCAGCGC-GCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCGTGAGTG---------------------CACTTG-CGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCGATTTG-TGAT------TTGCGTGC---------------------------A-----------------....................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------TTGCGTGC---------------------------A-----------------GTT-G--AAG..........................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------TTGCGTGC---------------------------A-----------------GTT-G--AAGG.........................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
dm3
AACAAAAGATATGAACGCAGCGC-GCTGA--------------------------------------------GCT------GCTCTTGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATATTT-TCTCT----AT------------------------------------------------------------TTTTTATTTTT-------TTTTCCGCCCAT------------------------------------TTT-TGTGTT--GTTT-TTAATAAGCTTACAACT-TTACAA--GTGTT-----TTTTGTTGTGA-----TT-------------------------------------------------------TTTG----------------------------------TACTTTCGTGAGTGATTTGTGAT-------------TT----------GC-----------------------------GAT------TTGCGTGC---------------------------A-----------------GTT-G--AAGGCGAGGAG--AACTGCAT------TCGA-------------------------------------------------------------TCTTTCCGATCAGCAGTGCCTTG-AGATTGCCGCTTTCGAAGTGAACGTTTCGATGTAGA--AACCTTAAAGTCATACTCAT-GTCTAATTACACAAGCTA--TTCCC-------TGG--CC--------------------------------GACTAAATC-------------------AGCT----CTTAG---------------------------------------------------------------TAAGAAGA----ACGTGGTAATTA-----CASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.ACAAAAGATATGAACGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-G--AAGGCGAGGAG--AAC.............................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAG---------------------------------------------------------------TAAGAAGA----ACGTGGTAA..........2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-G--AAGGCGAGGAG--AACTGC..........................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGAT-------------TT----------GC-----------------------------GAT------TTGCGTGC---------------------------A-----------------....................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000
...........................GA--------------------------------------------GCT------GCTCTTGACGTCG---C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCCTTG-AGATTGCCGCTTTCG..........................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.ACAAAAGATATGAACGCAGCGC-GCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAG--AACTGCAT------TCGA-------------------------------------------------------------TC...............................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-G--AAGGCGAGGAG--AACTGCAT------TCGA-------------------------------------------------------------.................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
...............CGCAGCGC-GCTGA--------------------------------------------GCT------GCTCTTGACGTCG---C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGAGTGATTTGTGAT-------------TT----------GC-----------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-AGATTGCCGCTTTCGAAGTGAACGT................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-G--AAGGCGAGGAG--AACTGCAT------TCGA-------------------------------------------------------------.................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GTT-----TTTTGTTGTGA-----TT-------------------------------------------------------TTTG----------------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................GACGTCG---CCGCCAAGGTTC-------------------GAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTA--TTCCC-------TGG--CC--------------------------------GACTAA.................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AACGCAGCGC-GCTGA--------------------------------------------GCT------G.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
AACAAAAGATATGAACGCAGCGC-G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGTGAGTGATTTGTGAT-------------TT----------GC-----------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGTGAT-------------TT----------GC-----------------------------GAT------TTGCGTGC---------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTGAACGTTTCGATGTAGA--AACC...............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-----------------------------GAT------TTGCGTGC---------------------------A-----------------GTT-G--AAGG.........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAG--AACTGCAT------TCGA-------------------------------------------------------------TC...............................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAACGTTTCGATGTAGG--...................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTGAGTGATTTGTGAT-------------TT----------GC-----------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT----------GC-----------------------------GAT------TTGCGTGC---------------------------A-----------------GTT-G--AA...........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................TT-TGTGTT--GTTT-TTAATAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................T------------------------------------TTT-TGTGTT--GTTT-TTAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTACACAAGCTA--TTCCC-------TGG--CC--------------------------------GAC....................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCGATCAGCAGTGCCTTG-AGATTGC..................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGAT-------------TT----------GC-----------------------------GAT------TTGCGTGC---------------------------A-----------------GT..................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
AACAAAAGATATGAACGCAGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTA--TTCCC-------TGG--CC--------------------------------GACTAAAT...............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCGATCAGCAGTGCCTTG-AGA......................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT----------GC-----------------------------GAT------TTGCGTGC---------------------------A-----------------GTT-................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC-------------------AGCT----CTTAG---------------------------------------------------------------TAAGAAGA----ACG................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTGAACGTTTCGATGTAGA--...................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGTGAT-------------TT----------GC-----------------------------GAT------TTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GAACGCAGCGC-GCTGA--------------------------------------------GCT------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGAT-------------TT----------GC-----------------------------GAT------TTGCGTGC---------------------------A-----------------GTT-................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAT------TCGA-------------------------------------------------------------TCTTTCCGATCAGCAGT................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AAGATATGAACGCAGCGC-GCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------TTGCGTGC---------------------------A-----------------GTT-G--AAGGCG.......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------------------------------------TAAGAAGA----ACGTGGTAA..........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGAT-------------TT----------GC-----------------------------GAT------TTGCGTGC---------------------------A-----------------GT..................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGC---------------------------A-----------------GTT-G--AAGGCGAGGAG--AAC.............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCCTTG-AGATTGCCGCTT.............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TT-TGTGTT--GTTT-TTAATAAGCTTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AAAGATATGAACGCAGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA--AACCTTAAAGTCATACT..................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------TTGCGTGC---------------------------A-----------------GTT-G--AAGGCGAGGA...................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-AGATTGCCGCTTTCGAAGTGAACGTT...............................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAATTACACAAGCTA--TTCCC-------..............................................................................................................................................................................2211.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA-------------------------------------------------------------TCTTTCCGATCAGCAGTGCCTTG-AG.......................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.ACAAAAGATATGAACGCAGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------------------------------------TAAGAAGA----ACGTGGTAAT.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................C-GCTGA--------------------------------------------GCT------GCTCTTGACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCGATCAGCAGTGCCTT...........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCCGCTTTCGAAGTGAACA.................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGCAGTGCCTTG-AGAT.....................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCGATCAGCAGTGCCTTG-AGT......................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGAT-------------TT----------GC-----------------------------GAT------TTGCGTGC---------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATACTCAT-GTCTAATTACACAAGC..............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAAAGATATGAACGCAGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--TTCCC-------TGG--CC--------------------------------GACTAAATC-------------------AGCT----...................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCTTTCGAAGTGAACGTTTC.............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................GACGTCG---CCGCCAAGGTTC-------------------GA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG-AGATTGCCGCTTTCGAAGTGAACGT................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................CGCCAAGGTTC-------------------GAATCA-GA----TATATTT-T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
....................CGC-GCTGA--------------------------------------------GCT------GCTCTTGACGTCG---C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCTTTCGAAGTGAA...................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGCCGCTTTCGAAGTGAACGTT...............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTTAAAGTCATACTCAT-GTCTAATTAC....................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGAGGAG--AACTGCAT------TCG...............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCGAGGAG--AACTGCAT------TCGA-------------------------------------------------------------.................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-G--AAGGCGAGGAG--AACT............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT----------GC-----------------------------GAT------TTGCGTGC---------------------------A-----------------GTT-G--AAGGCG.......................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................T------GCTCTTGACGTCG---CCGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droEre2
AACAAAAGATATGAACGCAGCGC----------------------------------------------------------------TGACGTCGCCGCCGCCAAGGTTC-------------------GAATCA-GA----TATATCTTGTCGTTTTA--------------------------------------------------------------------------------CTTTCCGCCCAT------------------------------------TTT-TGTGTTTTGTTT-TTAATAAGTTTACAACT-TTACAA--GTGTGGT------------GA-----TT---TTTTGTTTTTCGTT-----------CT---------------------------------------------------------------TACTTTCGTG-------TGTG--------------CATTTT-CGCCAAGT-----------------------------GAT------TTGCGTGC---------------------------A-----------------GCT-C--AAGGGGAGGAG--AACTGCAT------TCGAGGCCCTCGCG----------------------------------------CTCC---CCGATCTTTCCGATCAGCAGTGCCTTG-AGATTGCCGCTTTCGAAGTGAACGTTCCGATGTGGA--AACCTTA------TACTCAT-GTCTAATTACACAAGCTATATTCCC-------TGGCGCA--------------------------------GACTAAATC-------------------AGCT----CTAAAGCGGG---CATAAGAGCTCGAA-AA-TTTATTGCTATCCGGTCATAAATTTTGGAA-----CGGAAGTAGGA----CGTTGTAGTTG-----AASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAATTTTGGAA-----CGGAAGTAGGA----C.................2511.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATTACACAAGCTATATTCC......................................................................................................................................................................................2211.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTGCCGCTTTCGAAGTGAACGTTC..............................................................................................................................................................................................................................................2711.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................TTTTCGTT-----------CT---------------------------------------------------------------TACTTTCGTG-------TGTG--------------CAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
..................AGCGC----------------------------------------------------------------TGACGTCGCCGCCGCCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
droYak3
AACAAAAGATATGAACGCAGCGC----------------------------------------------------------------TGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATATTT-T-TTT----GT-----------------TTTT-TTTTTT--------TTTCA----GTTTTT---------------TT---TCCGTTTTTTTTCGCCCAT------------------------------------TTT-TGTGTT--GTTT-TTTATAAGTTTACAACT-TTACAA--CTGCTGT------------GA-----TT-------------------------------------------------------TTT-----------------------------------TACTTTCGTGAGTG---------------------CATTTT-CGCAAAGT-----------------------------GAT------TTGCGTGC---------------------------A-----------------GTT-C--AAGGGGAGGAG--AACTGCAT------TCGAGGCCCTCGCG------------------------------------------CC---CCGATCTTTCCGATCAGCAGTGCCTTG-AGATTGCCGCTTTCGAAGTGAACGTTCTGATGTGGA--AACCTTT------TACTCAT-GTCTAATTACACAAGCTA--TTACC-------TGG--CA--------------------------------GACTAAATC-------------------AGCT----CTAAATCGGGGC-CATAAGAGCTCGAA-AA-TTTAATGCTATCCGGCCACACCTATAGGAA-----CGGAAGAAGGA----CGCTGTAGTTG------ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........ATGAACGCAGCGC----------------------------------------------------------------TGACGTCG---CC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................TT-------------------------------------------------------TTT-----------------------------------TACTTTCGTGAGTG---------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------GTT-C--AAGGGGAGGAG--AACTGCAT------TCGA..............................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.......GATATGAACGCAGCGC----------------------------------------------------------------TGACGTCG---CCGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-C--AAGGGGAGGAG--AACTGCAT------TCGAG.............................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.........TATGAACGCAGCGC----------------------------------------------------------------TGACGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000
........ATATGAACGCAGCGC----------------------------------------------------------------TGACGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
....AAAGATATGAACGCAGCGC----------------------------------------------------------------TGACGTCG---CC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
droEug1
AACAAAAGATATGAACGCAGTGC----------------------------------------------------------------TGACGTCG---CCGCCAGGGTTT-------------------GAATCA-GA----TATTA-TATTT----------------------------------------------------------------------------------------TTCAGTCAAT------------------------------------TTC-TGTGTT--GTTTTTTGATAACTTTACAACT-TTACAA--CTGTTGT------------G----------------TTATTTTCT-----------------------------------------------------------------------TGATTTT-TTTTGTG-------TGTGAT-------------TTTTG-TGCCTAGT-----------------------------GAT------TTGCGTGC---------------------------A-----------------CTT-C--AAGGGGAGGAG--AACTGCAT------TCGAGGCCCTCAC------------------------------------------TTT---ACAATCTTTCCGATCAGCAGTGCCTTG-AGATTGCCGCTCGCAAAGTGAACGTTCCGATGTGAA--AGCTTCG------TACACAT-GTCTAATTACACAAGCTA--ATCCC-------AGC--CA--------------------------------GACTAAATC-------------------AGAT----CTAAATCGGCAT-CGTAAGAATTGGAA-AA-TTTAATGCAATC----------AGTTGGAA-----CGGAAGGAGGA-------AGTAGTTA-----AASizeHit CountTotal NormTotal
No Reads
droBia1
AACAAAAGATATGAACGCAGCGC----------------------------------------------------------------TGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATTA-TATTTTT----GCC------------C--CGT---------------------------------------------------------TTTTTTTCGCCCAT------------------------------------TTC-TGGGTT--GTTT-CTGATAAGTTTACAACT--TACAACGCGGTTGT------------GATTTGATTTTTTCCTGTGGGCT---------------------------------------------------------------------------------------TG-------TGTGAC-------------TTT----GCCAAGC-----------------------------GAT------TTGCGTGC---------------------------A-----------------CCT-C--AAGGGGAGGAG--AACTGCAT------TCGCGGCCCCTG----GC-------------------------------------TCTCCGCCGATCTTTCCGATCAGCAGTGCCTTG-AGATTGCCGCTCGCCAAGTGAACGTTCCGACGTGGA--AACCTTA------TACACAT-GTCTAACTACACAAGCTA--ATCCC-------AGC--CA--------------------------------GACCAAATC-------------------AGCC----TTGAATCGGCAG-CTCAGGAACCCGACTAA-CTTAATGCTAGCCCGCTGCTCCAGTTGGCA-----CGGAAGGAGGA-------AGTAG----------SizeHit CountTotal NormTotal
No Reads
droTak1
AACAAAAGATATGAACGCAGCGC----------------------------------------------------------------TGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATTA-TATTT----------------------------------------------------------------------------------------TTTCGCCCAT--------------------TTTTGTCTGCGTTGTTTTT-CGT------TTT-TTGATAAGTTTACAACT-TTACAA--CTGTG--------------------------TTCTGT---------------------ATTTTTTTT--T--------------------------------------------------------TGGTG-------TCTGAT-------------TTTT--TTCCAAGT-----------------------------GAT------TTGCGTGC---------------------------A-----------------CTT-C--AAGGGGAGGAG--AACTGCAT------TCGAGGTTCCCA----GCA-------------------------------GCAGCTCT---CCGATCTTTTCGATCAGCAGTGCCTTG-AGATAGCCGCTCTCGAAGTGAACGTTCCGATGTGGA--AACCTTA------TACACAT-GTCTAATTACACAAGCTA--ATCCCGTAAACTAGC-CCA--------------------------------GACTAAATC-------------------AGCC----TTAAATCGGCAG-CCTAAGAACTCGGA-T--------------AC-------CAGTTGGAACGGAACGGAAGGAGGA-------AGTAG---------ASizeHit CountTotal NormTotal
No Reads
droEle1
AACAAAAGATATGAACGCAGCGC-A-------------------------------------------------------------CTGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATTA-TATTTTA----TTT------------T--CTT---T----------------------------------------------TT-------TTTTTCGCCCAT------------------------------------TTTGAGTGTT--GTTTTTTGATAAGTTTACAACTTTTACAA--CTCATGTGTTTT------------------------------------------------------------------------T------------------CTGTTCGAGTG-------------AGTG-------AGTGAT-------------TTTTT-GGCCAAGT-----------------------------GAT------TTGAA-----------------------------------------------------------------------TGCAT------TC---------------------------------------------------------------TCTTTCCGATCAGCAGTGCCTTG-AGATTGCCGCTCTCGAAGTGAACGTTCCGATGTGGA--AACCATA------TACACAT-GTCTAACTACGCCAGCTA--ATCCC-------AGC--CA--------------------------------GACTAGATC-------------------AGCC----TTAAATCGGCCGCCATAAGAACTCGCG-AT-TTGAATGCCATCACG------CAGTGGGAA-----CGGAAGGAGGA-------AGTAGTTGTCGAAAASizeHit CountTotal NormTotal
No Reads
droRho1
AACAAAAGATATGAACGCAGCGC----------------------------------------------------------------TGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATTA-TTTTTTT----TTC------------G--CAT---T----------------------------------------------TT-------TTTTCCAACCAT------------------------------------TTT-AGTGTT--GTTTTTTGATAAGTTTACAACTTTTACAA--CTGTTGT------------G----------------T---------------------ATTTTTTTTTTG--------------------------------------------------------TCGTG-------AGTGAT-------------TTTTC-GGCCAAGT-----------------------------GAT------TTGCGTGC---------------------------G-----------------GTT-G--AAGGGGAGGAG--AACTGCAT------TCGAGGCCCTCAC----------------------------------------------------TCTTTCCGATCAGCAGTGCCTTG-AGATTGCCGCTCTCGAAGTGAACGTTCCGATGTGGA--AACCTTA------TACACAT-GTCTAATTACACAAGCTA--ATCCC-------AGC--TG--------------------------------AACTAAATC-------------------GGCT----TTAAATCGGCAG-CATAAGAACTCGAA-AA-TTTAATGATATCTCG------CAGTTGGAA-----CGGAAGGAGGA-------AGTAGTCG-----AASizeHit CountTotal NormTotal
No Reads
droFic1
AACAAAAGATATGAACGCAGCGC----------------------------------------------------------------TGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATAA-TATTATT----TTT----------------------------------------TTCGTT----TTCGTTTT-T-----TTTTT-------TTTTTCGCCCAT------------------------------------TTT-TGTGTT--GTTT-TTGATAAGTTTACAACT-TTACAA--CTGTTGT------------TGTG------AGTTCTGTTTTTTTTT-----------T----------------------------------------------------------------T-----------------------ATTTTGTGTGGTTTTTT-TGCGAAGT-----------------------------GAT------TTGCGTGC---------------------------A-----------------CTT-C--AAGGGGAGGAG--AACTGCAT------TCGAGGCCCTCGCT------------------------------------------C--------TCTTTCCGATCAGCAGTGCCTTG-AGTTTGCCGCTCTCGAAGTGAACGTTCCGATGTGGA--AACCTTA------GACACAT-GTCGAATTACACAAGCCA--ATCCC-------AGC--CA--------------------------------GACTAAATC-------------------GGCT----TTAAGTCATAAGGCGTAAGAACTCGTA-AA-TTTAATGCAATCCCG------CAGAGGAAA-----CGGAAGGAGGA-------CGTAGTTG-----TASizeHit CountTotal NormTotal
No Reads
droKik1
AACAAAAGATATGAACGCAGTGC----------------------------------------------------------------TGACGTCG---CCGCCAAGGTTC-------------------GAATCA-GA----TATTA-TATTTTT----TGC----------------TTTT-TTTGTT--------GTTAA----TTTTTT---GCTGTTGTTCTGTT-TC----------------------------------------------------------------T--GTTT-TCCATAAACTTACAACT-TTACAA--CTTTTT--------------------------GGTGG---------------------CGTTTTTTT--T--------------------------------------------------------TTATT-------TGTGAC-------------TTTTT-CGCGTAGT-----------------------------GAT------TTGCGTGC---------------------------A-----------------CCT-C--AAGGGGAGGAG--AACTGCAT------CCGAGGCCCTCTC----------------------------------------------------TCTTTCGGATCAGCAGTGCCTTG-AGATTGCCGCTCTCGAAGTGAACGTTCCGATGT--------------------------GTCTAATTACACAAGCTT--TT-----------GG--A------------------------------------AAAATC-------------------AACC----C---------------------------------AATGACAGTCTA-------AGCTGAAG-------ATA-GAGGAAAAACGACTTGATTA------ASizeHit CountTotal NormTotal
No Reads
droAna3
AACAAAAGATATGAAAGCAGCGC----------------------------------------------------------------TGACGTTG---CCGCCAAGGTTC-------------------AAATCG-GA----TATTA-AATTTGT----TTT------------TCGTGTTT-TTTTTT--------TTTCA----TTGTTTTTTGTTGTTTATTTATT-TT--G--------------AT------------------------------------TTT-TCGGTT----------------------------------------------------------------------------------------------------TTGTTTTGATAAAATT--TATAAAGAATTTTTACATGTGTAGGA---------------TTGGG-------TGTGAT-------------TTTGAATTCAAAGC-----------------------------GAT------TTGCGTGC---------------------------A-----------------CCT-TACAAGGTGCAGTT--CTCCGCAC------TCGAGGCCCGAGATCGGCA-------------------------------TC------------------AGCATCAGCGGTGCCTTG-AGATTGCCACTCTCAAAGTGAACGTTCCGATGTGGA--AACCTTA------TACACAT-GTCTTATTACACAAGCTC--C---T-------GTC--CAGATCAGATACAAATTCAAAAATTTGTAAACAAAA---ATTGTAAAAAATAGAA-AATCCCAACCCTCTCT-------GAC-CAT-CGAACTGGAA-CATTTTAATGGTGATCCG-------AGTTGAAA-----GGGAAGACGG----AGGACGTAGCTG-----AASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------TTGCGTGC---------------------------A-----------------CCT-TACAAGG.........................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTTTTACATGTGTAGGA---------------TTGGG-------TGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACGTTCCGATGTGG......................................................................................................................................................................................................................................1811.001001000
droBip1
AACAAAAGATATGAACGCAGCGC----------------------------------------------------------------TGACGTTG---CCGCCAAGGTTC-------------------AAATCG-GA----TATTA-AATTTGT----TTT------------GCGTGTTTT-------------------TTCATTGTTTTTTCTTGTTTATTTATT-TT--GATTTTTTTTCG-----------------------------------------------GG-T----------------------------------------------------------------------------------------------------TTGTTGTGATAAAATTTTTGTAAA-AATTTTTACATGTGTAGGA---------------TTTGG-------TGTGAT-------------TTTGAATTCAAAGC-----------------------------GAT------TTGCGTGC---------------------------A-----------------CCT-TACAAGGT--GCAGTTCTCCGCACTGCCGTGCGAGGCCCG-------------------------------------------------------------AGATCAGCGGTGCCTTG-AGATTGCCACTCTCGAAGTGAACGTTCCGATGTGGA--AACCTTA------TACACAT-GTCTAATTACACAAGCTC--C---T-------GTC--CGGATCAGATACAAATTCAAAAAT-TATAAACAAAA---ATCAAAAAAAAAAAAAGAATAGCAACCCT--CT-------GAC-CAT-CGAATTGGAA-AATTTTAATGGTGATCCG-------AGTTGAAA-----GTTCAGGAAGA-------CGCAGCTG-----AASizeHit CountTotal NormTotal
No Reads
dp5
AACAAAAGATATGAACGCAACGCAGCCGC--------------------------------------------GTT------GCCGCTGACGTCG---CTGCCAAGGTTCGTCTGGGCAGCGCTCTGGCGAATCG-GA----TACTA-TAGTAGTATTATTTTCAGAGCAGAGC----TT------TTTCTTAGCGT-----------------------------------TTCGTTTCGTTTCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCTC--TG-------TGCTGAT------TTGCGTGCGTGTGGAGTCGTGTGCTCGTAGAGCTGA-----------------CCT-T---AGGAGCGGAA--AACTGCAC------CTGA------------------------------------------------------------ATCTCGCCCATCAGCAGTGCCTTG-AGATT-CCACTTTCCAAGTGAACGTT-CGATCTCGA--AAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCCTTG-AGATT-CCACTTTC...........................................................................................................................................................................................................................................................2213.0030300000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--TG-------TGCTGAT------TTGCGTGCGTGTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...................................................................................................................GGCAGCGCTCTGGCGAATCG-GA----TA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCGTAGAGCTGA-----------------CCT-T---AGGAGC......................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCCTTG-AGATT-CCACTTTCC..........................................................................................................................................................................................................................................................2311.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCCATCAGCAGTGCCTTG-AGATA-...................................................................................................................................................................................................................................................................2620.5010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAGTGCCTTG-AGAT.....................................................................................................................................................................................................................................................................1830.3310100000000
droPer2
AACAAAAGATATGAACGCAACGCAGCCGC--------------------------------------------GTT------GCCGCTGACGTCG---CTGCCAAGGTTCGTCTGGGCAGCGCTCTGGCGAATCG-GA----TACTA-TAGTAGTATTATTTTCAGAGCAGAGC----TT------TTTCTTAGCGT-----------------------------------TTCGTTTCGTTTCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTCTC--TG-------TGCTGAT------TTGCGTGCGTGTGGAGTCGTGTGCTCGTAGAGCTGA-----------------CCT-T---AGGAGCGGAA--AACTGCAC------CTGA------------------------------------------------------------ATCTCGCCCATCAGCAGTGCCTTG-AGATT-CCACTTTCCAAGTGAACGTT-CGATCTCGA--AAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................GCCGC--------------------------------------------GTT------GCCGCTGACGTCG---CTGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
droWil2
AACAAAAGATATGAACGCAACGTTG---C-GTTGACGTTGACGTTGTCGT---------------------------------T--TTGAAGTCG---CTGCCAAGGTTT-------------------TAATTT-TA----TGTTT-TTTTT---------------------TCCCGA-----------------------------------------------------------------TTTAAT------------------------------------TTT-TGCG---------------------------------------------------------------------TGTAAAGTTAAGTGACCTTTTT--GTTTTATTATTG-------------TT------------------TTGTTCGATTTGTTGATTTAGTTTAGTGAGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................T--TTGAAGTCG---CTGCCAAGGTTT-------------------TAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
.................................................T---------------------------------T--TTGAAGTCG---CTGCCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
......................TTG---C-GTTGACGTTGACGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
droVir3
AACAAAAGATATGAACACGCCGCCGCCG---TCTCCGTCTCCGTCGCCGTCTCAGTCGCCGTCTCAGTCG-CAGTC------GCAGTCAGCGTCG---CTGCCAAGGTTCGCTTGAACGT----TAGGCGAATCGAAATACATATAA-TTTTTTT----GTTT-----------C--CGA-----TTTT------------------------------------------------------------------ATTAACATTTGTTGCTTTCTGTTTTTGTTGATTTT-TGTATTTCATTT-TT-------------CT-TTTTAA--ATTTTAT------------TT--------TTTTCTGTTTTTTTTT-----------T----------------------------------------------------------------T-----------------------TTTTTTTA------------------------TAATTTTTATTT-------TGTTGTTTAACGGTTGCGTG--TGTAAAGTTA-G------------TGACCTTAGT--GAATCGTGATT-T--ACAGTGAGGAA--AACTGCAT------TTGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-G------------TGACCTTAGT--GAATCGTGATT-T--.............................................................................................................................................................................................................................................................................................................................................................................................2515.005000000000000000000000000000020200000000100000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--GAATCGTGATT-T--ACAGTGAGGAA--AA..............................................................................................................................................................................................................................................................................................................................................................................2614.004000000030000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTG--TGTAAAGTTA-G------------TGACCTTAG...............................................................................................................................................................................................................................................................................................................................................................................................................2613.003000000000000000000000000000000020000000100000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGGTTGCGTG--TGTAAAGTTA-G------------T.......................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000000000100000000000000000000000000000100000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTG--TGTAAAGTTA-G------------TGACCTTA................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000000000000000000001000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------TGTTGTTTAACGGTTGCGTG--................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000002000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT-------TGTTGTTTAACGGTTGCGTG--TG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000000000000000000000000000010010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTTTAACGGTTGCGTG--TGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000000000000000000001000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTTTAACGGTTGCGTG--TGTAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000000000000000000000000000000000100000100000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-------TGTTGTTTAACGGTTGCGTG--TG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002000001000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTAACGGTTGCGTG--TGTAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000002000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA-G------------TGACCTTAGT--GAATCGTGATT-T--.............................................................................................................................................................................................................................................................................................................................................................................................2612.002000000000100000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-------TGTTGTTTAACGGTTGCGTG--TGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000000000000000000000000000020000000000000000000000000000000000
AACAAAAGATATGAACACGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------------------------TAATTTTTATTT-------TGTTGTTTAACGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000100000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTG--TGTAAAGTTA-G------------TGACCTTAGT--G...........................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTA-G------------TGACCTTAGT--GAATCGTGA...................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000100000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGT--GAATCGTGATT-T--ACAGTGAGGA...................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000100000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATT-T--ACAGTGAGGAA--AACTGCAT------T.................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-------TGTTGTTTAACGGTTGCGTG--TTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000100000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------TGACCTTAGT--GAATCGTGATT-T--ACAGT........................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TGTAAAGTTA-G------------TGACCTTAGT--GAA.........................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTTTAACGGTTGCGTG--TGTAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG--TGTAAAGTTA-G------------TGACCTTAGT--GAA.........................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000001000000000000000000000000000000000000000000
................................................................................................................TTGAACGT----TAGGCGAATCGAAATACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGTG--TGTAAAGTTA-G------------TGACCTTAG...............................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000100000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTAACGGTTGCGTG--TGTAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTTTAACGGTTGCGTG--TG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTATTT-------TGTTGTTTAACGGTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000100000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-------TGTTGTTTAACGGTTGCGTG--................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................TAGGCGAATCGAAATACATATAA-TTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTGATT-T--ACAGTGAGGAA--AACTG...........................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGTGATT-T--ACAGTGAGGAA--AAC.............................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000100000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTGATT-T--ACAGTGAGGAA--AACTGCA.........................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCTTAGT--GAATCGTGATT-T--ACAGT........................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-G------------TGACCTTAGT--GAATCGTGATT-T--.............................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000100000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTGATT-T--ACAGTGAGGAA--AACT............................................................................................................................................................................................................................................................................................................................................................................2511.001000000000100000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGGTTGCGTG--TGTAAAGTTA-G------------TGA.....................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000100000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTAACGGTTGCGTG--TGTAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................AGGCGAATCGAAATACATATAA-TTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGTTA-G------------TGACCTTAGT--GAATCG......................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
............................................................GTCTCAGTCG-CAGTC------GCAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.101000000000000000000000000000010000000000000000000000000000000000
droMoj3
AACAAAAGATATGAACACGCCGACGCCGCAGTCGCCGTCGTCGTCGCCGTCGCAGTCGCAGACTCAGCCCAC-AAC------GACGTCAGCGTCG---CAGCCAAGGTTCGCCTGAACGT----TAGGTGAATCG-AATA---AATA-TATTTTT----TTT------------C--CGA---TTTTTT------------------------------------------------------------------ATTAACATTTGT------------------------TGCGTT------------------GCACCG-TTGTTA--TTGTT---------------------------ATTGTTTTTTTTT-----------T----------------------------------------------------------------T-----------------------TTTT------------T------------------------------------------AACGGTTGCGTG--TGTAAAGTTA-G------------TGACCTTAGAGTGAAGTGTGATTTC--GCAGTGAGGAA--AACTGCAT------TTGTGTGTTTTG----GAATTGAAATCGAATCGAATCGTAGCAGGCCCAGAC------------------GGCATTAGCAATGCCTTGGAGACTGTCTCCAT------TCACTTTTTGATCCGAACCAGACTAG------AACACTTGGCCTAATTACACAAGCGA--TTCTA-------GGC--TA--------------------------------AA---ATTC-------------------AACA----ACAAATTGGCAT---T----------------------------------------------------------------------------------ASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................AGCCAAGGTTCGCCTGAACGT----TAGGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...........................................................................................GTCG---CAGCCAAGGTTCGCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
droGri2
AACAAAAGATATGAACACGCCGCCGACACCGACGCCGACGCCGACTCTGCCGCA-------------------GTCACTTTCAACGCCAGCGTCG---TTGCCAAGGTTCGCTTGAACGT----TAGACGAATTGAAA----TATAA-TTTTT-------------------------------------------------TTCATTTTTTTCCGT--------------------TTTTTTTTT-CAATTTTTATTAACATTTGTTGCT-----------------------GT---------------------TACT-CGATGA--TTGTTGT------------TATG------T-TTTTGTTTTCTGTT-----------T----------------------------------------------------------------T--------------------CTTTTTTTGTGTTGTATTTT------------------------------------------AACGGTTGCGTG--TGTAAAGTTA-G------------TGACCTTAGA--AAAGCGTGATT-T--ACAGTGAGGAA--AACTGCAT------TTGGAGTCTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTGATT-T--ACAGTGAGGAA--................................................................................................................................................................................................................................................................................................................................................................................2111.00110
.....................GCCGACACCGACGCCGACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.33110

Generated: 05/18/2015 at 10:41 PM