ID:

dsi_30353

 Coordinate:

3l:10779903-10780092 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.8 -36.4 -36.1 -36.1

Flybase annnotation

CDS [3l_10780093_10780135_-]; exon [3l_10780093_10780135_-]; exon [3l_10779468_10779902_-]; CDS [3l_10779544_10779902_-]; intron [3l_10779903_10780092_-]; intron [3l_10779232_10785302_-]

No Repeatable elements found

Sense Strand Reads

-------###########################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CGAATGTATGATCCCACTCAAGAGCATTTATAGAGAGAATCCGCTGAAAGGTGGGTGGCTGGTTGGGTTGGTTGGTTGGGTTTTGCTGTTTTTGACGGTGGTGTGGCGATGGGGCGGTGTTTTGTTTGTCGCCGTCATTGCATCGCTGGCTGGCCGCCTTGATTCAGTTGCTTGTCGCCATTTGCACGAGTCACGCGCTGAGATTTCTCCCGCGACTCGGACACACACACACACACCCAGTGACGCCCATTGCCCACCGCCCAACTGGAAAAGAACGTCCACCCTCCAGC
******************************************************........((.((.((((((((...................(((((((((((.((((((((((........))))).))))).)))))))))))))))))))))..))******************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 M053
female body
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR1275487
Male larvae		 SRR553488
RT_0-2 hours eggs
...........TCCCACTCAAGAGCATTTATAGAGAGA............................................................................................................................................................................................................................................................ 27 0 1 3.00 3 0 0 2 0 0 0 1 0 0 0
...........................................................................................................................................GCATCGCTGGCTGGCCGCCTTGA................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................GTGGCTGGTTGGGTTGGTTGGTTGGGTT................................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................ATCATTGCATCGCTGGCT........................................................................................................................................... 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................GTCGCCGTCATTGCATCGCTG.............................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CCTTGATTCAGTTGCTTG.................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................TTATAGAGAGAATCCGCTGAAAGGTGG............................................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................CGCTGAGATTTCTCCCGCGACTCGGAC.................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..................................GAGAATCCGCTGAAAGGTGGGT.......................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................CGGACACACACACACACACCCA................................................... 22 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................TAGCGATCGGGTGGTGTTTT....................................................................................................................................................................... 20 3 4 0.50 2 0 1 0 0 1 0 0 0 0 0
..........................................................................................................................................................................CTCGTCGCCATTTTGACGAGT................................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...............................................................TGGGTTGGTTGGTTGGGAT................................................................................................................................................................................................................ 19 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0
............................................................................TGGTCTTTGCTGTTGTTGACGG................................................................................................................................................................................................ 22 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0
....................................................................................................GTGTGACGATGGGGTGATGTT......................................................................................................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................TGACGATGGAGCGGTGTT......................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................GCATTGCATCGCTGGCTT.......................................................................................................................................... 18 2 18 0.22 4 0 3 0 0 0 1 0 0 0 0
.....................................................................................................................................................................AGTTGGTTGTCGCCATTTCCCC....................................................................................................... 22 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0
.......................................................................................................TAGGGATCGGGCGGTGTTT........................................................................................................................................................................ 19 3 12 0.17 2 0 1 0 0 1 0 0 0 0 0
.......................................................................................................TAGGGATGGGGTGGTGTTTT....................................................................................................................................................................... 20 3 12 0.08 1 0 0 0 0 1 0 0 0 0 0
........................................................................................................AGCGATCGGGTGGTGTTTT....................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................GCCGCCTCGATTCAGA.......................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1
.........................................................................GGTTGGGTTTTGATG.......................................................................................................................................................................................................... 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................TGGGGATCGGGTGGTGTTTT....................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

GCTTACATACTAGGGTGAGTTCTCGTAAATATCTCTCTTAGGCGACTTTCCACCCACCGACCAACCCAACCAACCAACCCAAAACGACAAAAACTGCCACCACACCGCTACCCCGCCACAAAACAAACAGCGGCAGTAACGTAGCGACCGACCGGCGGAACTAAGTCAACGAACAGCGGTAAACGTGCTCAGTGCGCGACTCTAAAGAGGGCGCTGAGCCTGTGTGTGTGTGTGTGGGTCACTGCGGGTAACGGGTGGCGGGTTGACCTTTTCTTGCAGGTGGGAGGTCG
********************************************************************************************************************************........((.((.((((((((...................(((((((((((.((((((((((........))))).))))).)))))))))))))))))))))..))****************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
..............................................................................CCAAAACGACAAAAACTG.................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0
....................................................................................................................CACAGAACTAACAGCGGCAGTT........................................................................................................................................................ 22 3 2 0.50 1 0 1 0 0
........................................................................................................................................................................................................................AGCCTGTGTGTGTGT........................................................... 15 0 8 0.25 2 0 0 2 0
.......................................................................................................................................................................................................................................................GTAGCGGGTAGCGGGTTGAC....................... 20 2 12 0.08 1 0 0 0 1
............................................................................................................................................................................................................AAGAGGGCGCCGAGC....................................................................... 15 1 14 0.07 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:10779853-10780142 - dsi_30353 CGA------A-TGTATG-----ATCCCACTCAAGAGCAT-------TTATAGAGA---GA---------------------------------A---TCCG--C-TGA-------AAGGTGGGTGG-CTGGTT---GG---GTT-------------GGTTGGT----TGGGTTTTG-------C---TG---TTTTT---------------------G--ACGGTGGT-------G-------------------------TGGC-GATGGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTGCATCGCT-------------------GG---CT-GGCCGCCTTGA--TTCAGTTGCT---TGTCGCCATTTGCACGAGTCACGCGCTGAG--ATTTCT--CCC-GCGACT---CG-----------GACACACACA----------CACACA----CCCAGTG-ACG-------------------------CC---------CATTGCCCAC----------------------CGCC-------CAACTGGAAA-------------------------------------------------A-----------------------------------------------GAACGTCCACCCTCCAGC
droSec2 scaffold_0:3261522-3261808 - CGA------A-TGTATG-----ATCCCACTCAAGAGCAT-------TTATAGAGA---GA---------------------------------A---TCCG--C-TGA-------AAGGTGGGTGG-CTGGTT---GG---GTT-------------GGTTGGT----TGGGTTTTG-------C---TG---TTTTT---------------------G--ACGGTGGT-------G-------------------------TGGC-GATGGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTGCATCGCT-------------------GG---CT-GTCCGCCTTGA--TTCAGTTGCT---TGTCGCCATTTGCACGAGTCACGCGCTGAG--ATTTCT--CCC-GCGACT---CG-----------GACACACACA----------CACACACACACCCAGTG-ACG-------------------------CC----------------CAC----------------------CGCC-------CAACTGGAAA-------------------------------------------------A-----------------------------------------------GAACGTCCATCCTCCAGC
dm3 chr3L:11033789-11034076 - CGA------A-TGTATG-----ATCCCACTCAAGAGCAT-------TTATAGAGA---GA---------------------------------A---TCCG--C-TGA-------AAGGTGGGTGG-CTAGTT---GG---GTT-------------GGTTGGT----TGGGTTTTG-------C---TG---TTTTT---------------------G--ACGGTGGT-------G-------------------------TGGC-GGTGGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTGCATCGCT-------------------GG---CT-GGCCGCCTTGA--TTCAGTTGCT---TGTCGCCATTTGCACGAGTCACGCGCTGAG--ATTTCT--CCC-GAGACT---CG-----------TATACACACA----------CACACA------CAGTG-ACG-------------------------CC---------CACCGTCCAC----------------------CGTC-------CAACTGGAAC-------------------------------------------------A-----------------------------------------------GAACGTCCATCCTCCAGC
droEre2 scaffold_4784:11042655-11042943 - CGA------A-TCTATG-----ATCCCACTCAAGAGCAT-------TTACAGAGA---GA---------------------------------A---TCCA--C-TGA-------AAGGTGGGTGG-CTGGCT---GG---G-----------------CTGCT----TGGGTTTTG-------C---CG---TTGGT---------------------GGCACGGCGGT-------G-------------------------TGGC-GATGGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTGCATCGCT-------------------GG---CT-GGCCGCCTTGA--TTCAGTTGCT---TGTCGCCATTGGCTCGAGTCACGCGCTGAG--ATTTCT--CCC-GCGACT---CG-----------CACACACACA--------------------TCCAGCG-ACA-------------------------CC---------CACCGCCCAC----------------------CGCCCACAGGACAACTGGAAA-------------------------------------------------A-----------------------------------------------GAACGTCCATCCTCCAGC
droYak3 3L:11062090-11062378 - CGA------A-TGTATG-----AACCCACTCAAGAGCAT-------TTATAGAGA---GA---------------------------------A---TCCA--C-TGA-------AAGGTGGGTGG-CTGCTT---GG---GTTAGTTGGTTGGT----CTGGT----TGGGATTTG-------C---CG---TTTTT---------------------G--ACGGTGGT-------G-------------------------TGGC-GATGGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTGCATCGCT-------------------GG---CT-GGCCGCCTTGA--TTCAGTTGCT---TGTCGCCATTTGCTCGAGTCACGCGCTGAG--ATTTCT--CCC-GCGACT---CG-----------CACCCACACA----------CATACA----------------------------------------AC---------CACCGCCCAC----------------------TGGC-------CAACTGGAAA-------------------------------------------------A-----------------------------------------------GAACGTCCATCCTGCAGC
droEug1 scf7180000409711:2907660-2907927 - CGAGAA--TA-TGTATG-----ATCCCACTCAAGAGCAT--------TATAGAGAGGAGA---------------------------------A---TCCG--T-TG---------AGGTGGGTGG-TT---T---GG---GTT-------------GGCTATG----TGGATTCGG-------T---TGGATTTTCT------------------------------------------------------------GGCGGTGGC-GAGAGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTACAGCGTT-------------------GG---CT-GGCCGCCTTGA--TTCAGTTGCT---TGTCGCCGTTTGCAAGAGCCACGCGCTGAG--ATTTAT--CCC-GCTATT---CG-----------CAC------------------------------------CG-------------------------CC----------------CACCGCTCAACC-----CCATCGC-CGAC-------CAACTGGAAA------------------------------------------------------------------------------------------------------TTCAC---TTAGC
droBia1 scf7180000302193:590998-591280 + CGT------A-CGTATG-----ATCCCACTCAAGAGCAC--------AGTAGAGCGCAGA---------------------------------A---CCGG--G-CGA-------AAGGTGGGTGG-TTG-------G---G------------GCTGGC--------GG------------------TGGCTTTTTC------------------------------------------------------------GGCGGTGGC-GATGGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTACAGCGCT-------------------GG---CT-TTCCGCCTTGA--ATCAGTTGCT---TGTCGCCGCTTGCAAGAGTCACGCGCCGAGAGATTTGT--CCC-GCGTCC---AG-----------CACGCCCACT--C------------------ACAGCT-ACG-------------------------CC---------CAC-----GC----------------------CGCC-------CCGCTGGAAACC---C---------------------------------------------ACCG---CCTTCGTC---GCCGCCC-CTGA---------------------TCCAC---CCAGC
droTak1 scf7180000415185:216695-216973 - T-----------GTATG-----ATCGCACTCAAGAGCATT------GTATAGAGAGGAGA---------------------------------A---TCAAAGCCGAA-------AAGGTGGGTGG-TTG-------G---G------------GCTG----AT----GGGG----G-------T---TGGTTTTTTC------------------------------------------------------------GGCGGTGGC-GATGGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTACAGCGCT-------------------GG---CT-TTCCGCCTTGA--ATCAGTTGCT---TGTCGCCGTTTGCAAGAGTCACGCGCTCAG--ATTTGT--CCC-GCTTCT---TG-----------GGCACGCCCA----------CACA-------------TACG-------------------------CC---------CAC-----GT----------------------CGCC-------CAACTGGAAACC---C------------------------------------ATTGAATCCGCCA---CCTT---------------------------------------GTCCAC---CCAGC
droEle1 scf7180000490564:1935304-1935605 - CGA------G-T--ATGATCTGATCCCACTCAAGAGCAT--------CGTAGAGA---GA---------------------------------A---TCAA--A-TGA-------GAGGTGGGTGGAATGGTTAGTGGATAGTT-------------GGTGGGTTGGCAT-GT-------------------TTTTTT---------------------G--GCGGTGGCGGT-------------------------GGCGGTGAC-GAAGGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTACAGCGCT-----------GGCTGGCTGG---CT-GGCCGCCTTGA--TTCAGTTGCT---TGTCGCCGTTTGCAAGAGTCACGCGCTGAG--ATTCGT--CCC-GCTTCT---CG-----------CACAC-----------------------------------G-------------------------CC----------------CAT----------------------TGCC-------CAACTGGAAACCGCCCATCGCTCA-------------------------------------------------TCGTCCGTC-----------------------------GCCCACCGCCCAGC
droRho1 scf7180000780091:765467-765761 - --------------ATG-----ATCGTAGTCAAGAGGAT-------T---AGAGA---AA-------------------------------------------C-TGC-------AATGTGAATGG-ATAGTG---GGAGAATT-------------GGTGAGA----TGGTTTT------------------ATTTT------------------------------------------------------------GGCGGTGGC-GATGGGGC--G---GT---GTTTTGTTTGTCGCTGTCATTTCAGCGCT-----------TGCC----GG---CT-GACCGCCTTGA--TTCAGTTGCT---TGTCGCCCTTTGCAAGAGTCACACGTTGAG--ATTCGT--CCC-GCCTCT---CG-----------CACACGCCCACTGAGCGTCACACACA----C--------CG---CCCAACGCCT--------AACGCCCACACCGCCCACCGCCAAC----------------------CGTC-------CAACTGGATA---------------------------------------------------------------------------------------------------CCGACCACCGCCTGGC
droFic1 scf7180000454107:375297-375633 - ---------A-CGTATGAT---CTCCCACTTAAGAGAAT--------TATAGAGA---GA---------------------------------A---TCCAA-A-TGA-------AATGTGGGTGG-ATAGGT---AG---ATG----GGTTGGA----TTGGC----TTGGATTCG------------A---TATTT---------------------G--GCGGTGGCGGT-------------------------GGCGGTGGC-GATGGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTACAGCGCT-------------------GG---CT-GGCCGCCTTGA--TTCAGTTGCT---TGTCGCCGTTTGCCAGAGTCACGCGCTGAG--ATTCGT--CCCCGCTGTATTTTGGCACAAACACTAACACACACA----------CACACA----CACGCCG-ACGCCACCCACCACCACCCCCACGCACGCC--CGCCGCCCACCGCCCGC----------------------CGTC-------CAACTGGAA------------------------------------------------------------------------------------------------------GTCCAA---CCAGC
droKik1 scf7180000302388:204931-205237 - CGA------CGTGCATT-----ATCCCACTCAAGAGCATCGCTGCTTTTGGGAGA---GA---------------------------------A---GCAT--C-TG-----------GTGGGTG-----------------TT-------------GG-TGGT----TGGGATTTAATAGAAATCTGTGA--TCTCT------------------------------------------------------------GGGGGTGGC-GATGGGGC--G---GT---ATTTTGTTTG--GCCGT-----------------------------GTGG---CT-GGCCGCCTTGA--TTCAGTTGCT---TGTCGCCGCTTGCAAGAGTCACGCGCCGAG--ATTTGT--CCC-TCGTCG---CT-----------CT-----------------------------------------------------------------------------C-----GT----------------------CGT---------------CATCTGTTTCTCTCTCTATAACTCTCTCTGGCTGGA---CACCTCCTGGCCACCACCGACGCCTC-------GTC---C-TCCACCTGCTCCTCCT-----------CCTCCTCCAAC
droAna3 scaffold_13337:15947206-15947508 - dan_2663 C------------TATG-----ATCCCACTCAAGAGCAG-------AAATGGCGC---TC---------------------------------A---TTCA--A-TGATCGTTCTATGGTGGGTGG-GTGGTG---GT---GCC-----------------AGG----TGGA---GG-------G---TGG-----CA------------------------------------------------------------GGCGGTGGATTCTGGGGAGGGGT-GT---TTTTTGTTTGTCGCCGTCATTACAGCGCT-----------GGCCGTGTGGCTGCT-TGCCGCCTTGA--ATCAGTTGCTTTTTGTCGCAGTTTGCAAGAGTCACGCGCCGAG--ATTCGTCTCCA-ACGAAT---CC-----------CT------CT--C------------------CTC---------------------------------C---------------------CT-------------------------------------------------AA------------CTGTCCGAACTGCGACGCCTGGAAACTACCG---CCCT-------GCCGCCC-------------------ACCACAGTCCCATCACAGTC
droBip1 scf7180000395832:514044-514353 - CGAGTGGGTT-CCTATG-----ATCCCACTCAAGAGCAG-------ATATGGCGC---TC---------------------------------A---TTCT--A-TGAT------CCGGTGGGTGG-CAG-TG---GT--------------------------------------------------------------------------------------------GGTGTCGGTGGCAGGTGGACGGGTCGCAGGCGGTGGATGCTGGGGG-GGGT-GT---TTTTTGTTTGTCGCCGTCATTACAGCGCT-----------GGCCGTGTGGCTGCT-TGCCGCCTTGA--ATCAGTTGCTTTTTGTCGCAGTTTGCAAGAGTCACGCGCCGAG--ATTCGTGTCCA-ACGAAT---CC-----------CG------CT--C------------------CTC---------------------------------C---------------------CT----------------------------------------------------------------TGGCCGAACTGCGACGCCTGGAAACCACCG---CCCT-------GCCGCCCACCGA-----TCCG-----------------GCACAATC
dp5 XR_group6:5990020-5990370 + CAC------A-T----------TTTCCACTCGAGAGGCA-------CAATGGCTAGTAGAATAATGCTCGTGGGAGCCCCGTCGTGAGAGAGAGCCATCTC--C-TGG---------------------------------------------------------------------------------------TCTGGGGCTGGCATGGGAGGGCATGGGA-------------------------------------------A-GGAAGGGG--GGCGCTTTGGTTTAGTTTGTCGCCGTCATTACACCGCTGCTGGTTTGCTGGCTGTATGGCTGTGAGGCTGCCTTGAAATTCAGTTGGT---TGTCGCCGTTTGAAAGAGTCACGCGCTGGG--TCTG---------CAT-----------------------------------------C-------------TCCG-------------------------CC----------------CACCTCCTGACCAAAGGCCATCGCGTTAC-------CTGCTGGAATCTCTCTCTCTCTCT-------------------------------------------------GTCTCTCTC---C-CCTACTCGCTCTGTCTCTGTCAAGGTCTCTCTTTTGAC
droPer2 scaffold_47:490417-490767 + CAC------A-T----------TTTCCACTCGAGAGGCA-------CAATGGCTAGTAGAATAATGCTCGTGGGAGCCCCGTCGAGAGAGAGAGCCATCTC--C-TGG---------------------------------------------------------------------------------------TCTGGGGCTGGCATGGGAGGGCATGGGA-------------------------------------------C-GGAAGGGG--GGCGCTTTGGTTTAGTTTGTCGCCGTCATTACACCGCTGCTGGTTCGCTGGCTGTATGGCTGTGAGGCTGCCTTGAAATTCAGTTGGT---TGTCGCCGTTTGAAAGAGTCACGCGCTGGG--TCTG---------CAT-----------------------------------------C-------------TCCG-------------------------CC----------------CACCTCCTGACCAAAGGCCATCGCGTTAC-------CTGCTGGAATCTCTCTCTCTCTCT-------------------------------------------------GTCTCTCTC---C-CCTACTCGCTCTGTCTCTGTCAAGGTCTCTCTTTTGAC
droWil2 scf2_1100000004729:2536973-2536984 + CCC------C-T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGA------A-TGTATG-----ATCCCACTCAAGAGCAT-------TTATAGAGA---GA---------------------------------A---TCCG--C-TGA-------AAGGTGGGTGG-CTGGTT---GG---GTT-------------GGTTGGT----TGGGTTTTG-------C---TG---TTTTT---------------------G--ACGGTGGT-------G-------------------------TGGC-GATGGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTGCATCGCT-------------------GG---CT-GGCCGCCTTGA--TTCAGTTGCT---TGTCGCCATTTGCACGAGTCACGCGCTGAG--ATTTCT--CCC-GCGACT---CG-----------GACACACACA----------CACACA----CCCAGTG-ACG-------------------------CC---------CATTGCCCAC----------------------CGCC-------CAACTGGAAA-------------------------------------------------A-----------------------------------------------GAACGTCCACCCTCCAGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................TCCCACTCAAGAGCAT-------TTATAGAGA---GA---------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300000021000000000
....................................................................................................................................................................................................................................................................................................................GCATCGCT-------------------GG---CT-GGCCGCCTTGA--....................................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
..........................................................................................................................GTGG-CTGGTT---GG---GTT-------------GGTTGGT----TGGGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000001000
........................................................................................................................................................................................................................................................................................................GTCGCCGTCATTGCATCGCT-------------------G........................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................CCTTGA--TTCAGTTGCT---TG.....................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
..............................................TTATAGAGA---GA---------------------------------A---TCCG--C-TGA-------AAGGTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................CGCTGAG--ATTTCT--CCC-GCGACT---CG-----------GAC..................................................................................................................................................................................................................................................2711.00110000000000000000
.....................................................GA---GA---------------------------------A---TCCG--C-TGA-------AAGGTGGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CG-----------GACACACACA----------CACACA----CCCA...................................................................................................................................................................................................................2220.50101000000000000000
droSec2
CGA------A-TGTATG-----ATCCCACTCAAGAGCAT-------TTATAGAGA---GA---------------------------------A---TCCG--C-TGA-------AAGGTGGGTGG-CTGGTT---GG---GTT-------------GGTTGGT----TGGGTTTTG-------C---TG---TTTTT---------------------G--ACGGTGGT-------G-------------------------TGGC-GATGGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTGCATCGCT-------------------GG---CT-GTCCGCCTTGA--TTCAGTTGCT---TGTCGCCATTTGCACGAGTCACGCGCTGAG--ATTTCT--CCC-GCGACT---CG-----------GACACACACA----------CACACACACACCCAGTG-ACG-------------------------CC----------------CAC----------------------CGCC-------CAACTGGAAA-------------------------------------------------A-----------------------------------------------GAACGTCCATCCTCCAGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
CGA------A-TGTATG-----ATCCCACTCAAGAGCAT-------TTATAGAGA---GA---------------------------------A---TCCG--C-TGA-------AAGGTGGGTGG-CTAGTT---GG---GTT-------------GGTTGGT----TGGGTTTTG-------C---TG---TTTTT---------------------G--ACGGTGGT-------G-------------------------TGGC-GGTGGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTGCATCGCT-------------------GG---CT-GGCCGCCTTGA--TTCAGTTGCT---TGTCGCCATTTGCACGAGTCACGCGCTGAG--ATTTCT--CCC-GAGACT---CG-----------TATACACACA----------CACACA------CAGTG-ACG-------------------------CC---------CACCGTCCAC----------------------CGTC-------CAACTGGAAC-------------------------------------------------A-----------------------------------------------GAACGTCCATCCTCCAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-------CAACTGGAAC-------------------------------------------------A-----------------------------------------------GAACGTCCATCCT.....26110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000090000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................GCCATTTGCACGAGTCACGCGCTGAG--AT.....................................................................................................................................................................................................................................................................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005
...........TGTATG-----ATCCCACTCAAGAGCAT-------T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
............................................................................................................................................................................TTTTG-------C---TG---TTTTT---------------------G--ACGGTGGT-------G-------------------------T................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TATAGAGA---GA---------------------------------A---TCCG--C-TGA-------AAGGTGGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CAAGAGCAT-------TTATAGAGA---GA---------------------------------A---TCCG--C-T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................GTGGGTGG-CTAGTT---GG---GTT-------------GGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000
......................................................................................................................GTGGGTGG-CTAGTT---GG---GTT-------------GGTTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000
...........TGTATG-----ATCCCACTCAAGAGCAT-------TTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TG-------C---TG---TTTTT---------------------G--ACGGTGGT-------G-------------------------TGGC-G...........................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TCGCCATTTGCACGAGTCACGCGCT............................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TT---GG---GTT-------------GGTTGGT----TGGGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------CAACTGGAAC-------------------------------------------------A-----------------------------------------------GAACGTCCATCCT.....2511.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC----------------------CGTC-------CAACTGGAAC-------------------------------------------------A-----------------------------------------------GAACGTCCATC.......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TAGTT---GG---GTT-------------GGTTGGT----TGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................T---GG---GTT-------------GGTTGGT----TGGGTTTTG-------C---TG---TTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TCAAGAGCAT-------TTATAGAGA---GA---------------------------------A---TCCG--C-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................TT---GG---GTT-------------GGTTGGT----TGGGTTTTG-------C---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTTGCACGAGTCACGCGCTGAG--ATTTC..................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TGG-CTAGTT---GG---GTT-------------GGTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................CACGAGTCACGCGCTGAG--A......................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-------CAACTGGAAC-------------------------------------------------A-----------------------------------------------GAACGTCCATCCTC....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................T---TGTCGCCATTTGCACGAGTCACGCGC.............................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TTTGTCGCCGTCATTGCATCGCT-------------------.........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................T---TGTCGCCATTTGCACGAGTCACG................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TGGGTGG-CTAGTT---GG---GTT-------------GGTTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACACA----------CACACA------CAGTG-ACG-------------------------CC---------CA......................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CACTCAAGAGCAT-------TTATAGAGA---GA---------------------------------A---.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TCCG--C-TGA-------AAGGTGGGTGG-CTAGTT---GG---...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................GG-CTAGTT---GG---GTT-------------GGTTGGT----................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAC----------------------CGTC-------CAACTGGAAC-------------------------------------------------A-----------------------------------------------GAACGTC...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TTTTGTTTGTCGCCGTCATTGC..................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................T-------TTATAGAGA---GA---------------------------------A---TCCG--C-TGA-------AAGGTGGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTGGAAC-------------------------------------------------A-----------------------------------------------GAACGTCCATCCTCCAGC2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CCCACTCAAGAGCAT-------TTATAGAGA---..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................TAGAGA---GA---------------------------------A---TCCG--C-TGA-------AAGGTGGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................CCTTGA--TTCAGTTGCT---TGTCGCCATT.............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................................................................................GTT-------------GGTTGGT----TGGGTTTTG-------C---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------CAACTGGAAC-------------------------------------------------A-----------------------------------------------GAACGTC...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GA------A-TGTATG-----ATCCCACTCAAGAGCAT-------T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................................................................................................................................................TTG-------C---TG---TTTTT---------------------G--ACGGTGGT-------G-------------------------TGGC-............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTGGAAC-------------------------------------------------A-----------------------------------------------GAACGTCCATCCTCC...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------CAACTGGAAC-------------------------------------------------A-----------------------------------------------GAACGTCCATCCTCC...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................G-------------------------TGGC-GGTGGGGC--G---GT---GTTTTGTTTGT..............................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................CTTGA--TTCAGTTGCT---TGTCGCCATT.............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TGTCGCCATTTGCACGAGTCACGC...............................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GAGA---GA---------------------------------A---TCCG--C-TGA-------AAGGTGGGTGG-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TGCT---TGTCGCCATTTGCACGAG.....................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................GTTTTGTTTGTCGCCGTCATTGC..................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TTTGTTTGTCGCCGTCATTGCATCGCT-------------------.........................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TGG-CTAGTT---GG---GTT-------------GGTTGGT----T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................GTT---GG---GTT-------------GGTTGGT----TGGGTTTTG-------C---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................CTCAAGAGCAT-------TTATAGAGA---GA---------------------------------A---TCCG--C-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................GGTGGGTGG-CTAGTT---GG---GTT-------------GG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................................................................................GTGGGTGG-CTAGTT---GG---GTT-------------GGTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................T----TGGGTTTTG-------C---TG---TTTTT---------------------G--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TTTGTCGCCGTCATTGCATCGCT-------------------GG---C...................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ACGAGTCACGCGCTGAG--ATTTCT--CCC-GC.........................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAC----------------------CGTC-------CAACTGGAAC-------------------------------------------------A-----------------------------------------------GAACGTC...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TGCACGAGTCACGCGCTGAG--ATTTC..................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................GCCATTTGCACGAGTCACGCG..............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTTGCACGAGTCACGCGCTGAG--ATT....................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TGG-CTAGTT---GG---GTT-------------GGTTGGT----................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TTG-------C---TG---TTTTT---------------------G--ACGGTGGT-------G-------------------------TG...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AT-------TTATAGAGA---GA---------------------------------A---TCCG--C-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................TG-------C---TG---TTTTT---------------------G--ACGGTGGT-------G-------------------------TGGC-............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TATAGAGA---GA---------------------------------A---TCCG--C-TGA-------AAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GAGA---GA---------------------------------A---TCCG--C-TGA-------AAGGTGGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CGCGCTGAG--ATTTCT--CCC-ATC........................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................GTT---GG---GTT-------------GGTTGGT----TGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................GTGGT-------G-------------------------TGGC-GGTGGGGC--A---AC---.........................................................................................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
droEre2
CGA------A-TCTATG-----ATCCCACTCAAGAGCAT-------TTACAGAGA---GA---------------------------------A---TCCA--C-TGA-------AAGGTGGGTGG-CTGGCT---GG---G-----------------CTGCT----TGGGTTTTG-------C---CG---TTGGT---------------------GGCACGGCGGT-------G-------------------------TGGC-GATGGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTGCATCGCT-------------------GG---CT-GGCCGCCTTGA--TTCAGTTGCT---TGTCGCCATTGGCTCGAGTCACGCGCTGAG--ATTTCT--CCC-GCGACT---CG-----------CACACACACA--------------------TCCAGCG-ACA-------------------------CC---------CACCGCCCAC----------------------CGCCCACAGGACAACTGGAAA-------------------------------------------------A-----------------------------------------------GAACGTCCATCCTCCAGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................CAAGAGCAT-------TTACAGAGA---GA---------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
......................................................................................................................................................................................................................................................................................G---GT---GTTTTGTTTGTCGCC..........................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
...........................................................................................................................................................................GTTTTG-------C---CG---TTGGT---------------------GGCACGGCGGT-------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
droYak3
CGA------A-TGTATG-----AACCCACTCAAGAGCAT-------TTATAGAGA---GA---------------------------------A---TCCA--C-TGA-------AAGGTGGGTGG-CTGCTT---GG---GTTAGTTGGTTGGT----CTGGT----TGGGATTTG-------C---CG---TTTTT---------------------G--ACGGTGGT-------G-------------------------TGGC-GATGGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTGCATCGCT-------------------GG---CT-GGCCGCCTTGA--TTCAGTTGCT---TGTCGCCATTTGCTCGAGTCACGCGCTGAG--ATTTCT--CCC-GCGACT---CG-----------CACCCACACA----------CATACA----------------------------------------AC---------CACCGCCCAC----------------------TGGC-------CAACTGGAAA-------------------------------------------------A-----------------------------------------------GAACGTCCATCCTGCAGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGAAA-------------------------------------------------A-----------------------------------------------GAACGTCCATCCTG....2311.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................GCCTTGA--TTCAGTTGCT---TGTCGCC................................................................................................................................................................................................................................................................................................................2411.00100000010000
..............................................................................................................................................................................................................................................................................................................GTCATTGCATCGCT-------------------GG---CT-GGCC.............................................................................................................................................................................................................................................................................................................................................2211.00110000000000
.............................TCAAGAGCAT-------TTATAGAGA---GA---------------------------------A---TCCA--C-T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
..................................................................................................................................................................................................TTTT---------------------G--ACGGTGGT-------G-------------------------TGGC-GAT.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................AGTCACGCGCTGAG--ATTTCT--CC.............................................................................................................................................................................................................................................................................2211.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................AGTTGCT---TGTCGCCATTTGC..........................................................................................................................................................................................................................................................................................................2011.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................CGCCATTTGCTCGAGTCACGCGC.............................................................................................................................................................................................................................................................................................2311.00100000010000
droEug1
CGAGAA--TA-TGTATG-----ATCCCACTCAAGAGCAT--------TATAGAGAGGAGA---------------------------------A---TCCG--T-TG---------AGGTGGGTGG-TT---T---GG---GTT-------------GGCTATG----TGGATTCGG-------T---TGGATTTTCT------------------------------------------------------------GGCGGTGGC-GAGAGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTACAGCGTT-------------------GG---CT-GGCCGCCTTGA--TTCAGTTGCT---TGTCGCCGTTTGCAAGAGCCACGCGCTGAG--ATTTAT--CCC-GCTATT---CG-----------CAC------------------------------------CG-------------------------CC----------------CACCGCTCAACC-----CCATCGC-CGAC-------CAACTGGAAA------------------------------------------------------------------------------------------------------TTCAC---TTAGCSizeHit CountTotal NormTotal
No Reads
droBia1
CGT------A-CGTATG-----ATCCCACTCAAGAGCAC--------AGTAGAGCGCAGA---------------------------------A---CCGG--G-CGA-------AAGGTGGGTGG-TTG-------G---G------------GCTGGC--------GG------------------TGGCTTTTTC------------------------------------------------------------GGCGGTGGC-GATGGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTACAGCGCT-------------------GG---CT-TTCCGCCTTGA--ATCAGTTGCT---TGTCGCCGCTTGCAAGAGTCACGCGCCGAGAGATTTGT--CCC-GCGTCC---AG-----------CACGCCCACT--C------------------ACAGCT-ACG-------------------------CC---------CAC-----GC----------------------CGCC-------CCGCTGGAAACC---C---------------------------------------------ACCG---CCTTCGTC---GCCGCCC-CTGA---------------------TCCAC---CCAGCSizeHit CountTotal NormTotal
No Reads
droTak1
T-----------GTATG-----ATCGCACTCAAGAGCATT------GTATAGAGAGGAGA---------------------------------A---TCAAAGCCGAA-------AAGGTGGGTGG-TTG-------G---G------------GCTG----AT----GGGG----G-------T---TGGTTTTTTC------------------------------------------------------------GGCGGTGGC-GATGGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTACAGCGCT-------------------GG---CT-TTCCGCCTTGA--ATCAGTTGCT---TGTCGCCGTTTGCAAGAGTCACGCGCTCAG--ATTTGT--CCC-GCTTCT---TG-----------GGCACGCCCA----------CACA-------------TACG-------------------------CC---------CAC-----GT----------------------CGCC-------CAACTGGAAACC---C------------------------------------ATTGAATCCGCCA---CCTT---------------------------------------GTCCAC---CCAGCSizeHit CountTotal NormTotal
No Reads
droEle1
CGA------G-T--ATGATCTGATCCCACTCAAGAGCAT--------CGTAGAGA---GA---------------------------------A---TCAA--A-TGA-------GAGGTGGGTGGAATGGTTAGTGGATAGTT-------------GGTGGGTTGGCAT-GT-------------------TTTTTT---------------------G--GCGGTGGCGGT-------------------------GGCGGTGAC-GAAGGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTACAGCGCT-----------GGCTGGCTGG---CT-GGCCGCCTTGA--TTCAGTTGCT---TGTCGCCGTTTGCAAGAGTCACGCGCTGAG--ATTCGT--CCC-GCTTCT---CG-----------CACAC-----------------------------------G-------------------------CC----------------CAT----------------------TGCC-------CAACTGGAAACCGCCCATCGCTCA-------------------------------------------------TCGTCCGTC-----------------------------GCCCACCGCCCAGCSizeHit CountTotal NormTotal
No Reads
droRho1
--------------ATG-----ATCGTAGTCAAGAGGAT-------T---AGAGA---AA-------------------------------------------C-TGC-------AATGTGAATGG-ATAGTG---GGAGAATT-------------GGTGAGA----TGGTTTT------------------ATTTT------------------------------------------------------------GGCGGTGGC-GATGGGGC--G---GT---GTTTTGTTTGTCGCTGTCATTTCAGCGCT-----------TGCC----GG---CT-GACCGCCTTGA--TTCAGTTGCT---TGTCGCCCTTTGCAAGAGTCACACGTTGAG--ATTCGT--CCC-GCCTCT---CG-----------CACACGCCCACTGAGCGTCACACACA----C--------CG---CCCAACGCCT--------AACGCCCACACCGCCCACCGCCAAC----------------------CGTC-------CAACTGGATA---------------------------------------------------------------------------------------------------CCGACCACCGCCTGGCSizeHit CountTotal NormTotal
No Reads
droFic1
---------A-CGTATGAT---CTCCCACTTAAGAGAAT--------TATAGAGA---GA---------------------------------A---TCCAA-A-TGA-------AATGTGGGTGG-ATAGGT---AG---ATG----GGTTGGA----TTGGC----TTGGATTCG------------A---TATTT---------------------G--GCGGTGGCGGT-------------------------GGCGGTGGC-GATGGGGC--G---GT---GTTTTGTTTGTCGCCGTCATTACAGCGCT-------------------GG---CT-GGCCGCCTTGA--TTCAGTTGCT---TGTCGCCGTTTGCCAGAGTCACGCGCTGAG--ATTCGT--CCCCGCTGTATTTTGGCACAAACACTAACACACACA----------CACACA----CACGCCG-ACGCCACCCACCACCACCCCCACGCACGCC--CGCCGCCCACCGCCCGC----------------------CGTC-------CAACTGGAA------------------------------------------------------------------------------------------------------GTCCAA---CCAGCSizeHit CountTotal NormTotal
No Reads
droKik1
CGA------CGTGCATT-----ATCCCACTCAAGAGCATCGCTGCTTTTGGGAGA---GA---------------------------------A---GCAT--C-TG-----------GTGGGTG-----------------TT-------------GG-TGGT----TGGGATTTAATAGAAATCTGTGA--TCTCT------------------------------------------------------------GGGGGTGGC-GATGGGGC--G---GT---ATTTTGTTTG--GCCGT-----------------------------GTGG---CT-GGCCGCCTTGA--TTCAGTTGCT---TGTCGCCGCTTGCAAGAGTCACGCGCCGAG--ATTTGT--CCC-TCGTCG---CT-----------CT-----------------------------------------------------------------------------C-----GT----------------------CGT---------------CATCTGTTTCTCTCTCTATAACTCTCTCTGGCTGGA---CACCTCCTGGCCACCACCGACGCCTC-------GTC---C-TCCACCTGCTCCTCCT-----------CCTCCTCCAACSizeHit CountTotal NormTotal
No Reads
droAna3
C------------TATG-----ATCCCACTCAAGAGCAG-------AAATGGCGC---TC---------------------------------A---TTCA--A-TGATCGTTCTATGGTGGGTGG-GTGGTG---GT---GCC-----------------AGG----TGGA---GG-------G---TGG-----CA------------------------------------------------------------GGCGGTGGATTCTGGGGAGGGGT-GT---TTTTTGTTTGTCGCCGTCATTACAGCGCT-----------GGCCGTGTGGCTGCT-TGCCGCCTTGA--ATCAGTTGCTTTTTGTCGCAGTTTGCAAGAGTCACGCGCCGAG--ATTCGTCTCCA-ACGAAT---CC-----------CT------CT--C------------------CTC---------------------------------C---------------------CT-------------------------------------------------AA------------CTGTCCGAACTGCGACGCCTGGAAACTACCG---CCCT-------GCCGCCC-------------------ACCACAGTCCCATCACAGTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................ATGGTGGGTGG-GTGGTG---GT---...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000002
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------CTGTCCGAACTGCGACGCCT.......................................................................2211.001100000
..........................................................................................................................................................................................................................................................................................GT---TTTTTGTTTGTCGCCGTCATTACAGC...............................................................................................................................................................................................................................................................................................................................................................................2811.001000010
.........................................................................................................................................................................................................................................................................................................................GCT-----------GGCCGTGTGGCTGCT-TGCC.............................................................................................................................................................................................................................................................................................................................................2211.001010000
...................................................................................................................ATGGTGGGTGG-GTGGTG---GT---G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....................................................................................................................TGGTGGGTGG-GTGGTG---GT---G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.002200000
....................................................................................................................TGGTGGGTGG-GTGGTG---GT---...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331000001
......................................................................................................................GTGGGTGG-GTGGTG---GT---GC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.251100000
droBip1
CGAGTGGGTT-CCTATG-----ATCCCACTCAAGAGCAG-------ATATGGCGC---TC---------------------------------A---TTCT--A-TGAT------CCGGTGGGTGG-CAG-TG---GT--------------------------------------------------------------------------------------------GGTGTCGGTGGCAGGTGGACGGGTCGCAGGCGGTGGATGCTGGGGG-GGGT-GT---TTTTTGTTTGTCGCCGTCATTACAGCGCT-----------GGCCGTGTGGCTGCT-TGCCGCCTTGA--ATCAGTTGCTTTTTGTCGCAGTTTGCAAGAGTCACGCGCCGAG--ATTCGTGTCCA-ACGAAT---CC-----------CG------CT--C------------------CTC---------------------------------C---------------------CT----------------------------------------------------------------TGGCCGAACTGCGACGCCTGGAAACCACCG---CCCT-------GCCGCCCACCGA-----TCCG-----------------GCACAATCSizeHit CountTotal NormTotal
No Reads
dp5
CAC------A-T----------TTTCCACTCGAGAGGCA-------CAATGGCTAGTAGAATAATGCTCGTGGGAGCCCCGTCGTGAGAGAGAGCCATCTC--C-TGG---------------------------------------------------------------------------------------TCTGGGGCTGGCATGGGAGGGCATGGGA-------------------------------------------A-GGAAGGGG--GGCGCTTTGGTTTAGTTTGTCGCCGTCATTACACCGCTGCTGGTTTGCTGGCTGTATGGCTGTGAGGCTGCCTTGAAATTCAGTTGGT---TGTCGCCGTTTGAAAGAGTCACGCGCTGGG--TCTG---------CAT-----------------------------------------C-------------TCCG-------------------------CC----------------CACCTCCTGACCAAAGGCCATCGCGTTAC-------CTGCTGGAATCTCTCTCTCTCTCT-------------------------------------------------GTCTCTCTC---C-CCTACTCGCTCTGTCTCTGTCAAGGTCTCTCTTTTGACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................................................................................................GAGTCACGCGCTGGG--TCTG---------CA........................................................................................................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................AGTCACGCGCTGGG--TCTG---------..........................................................................................................................................................................................................................................................................1811.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAATCTCTCTCTCTCTCT-------------------------------------------------GTC.................................................2311.0010000001000
...............................................................................................................................................................................................................................................................................................................................................................................................AGAGTCACGCGCTGGG--TCTG---------CAT-----------------------------------------C-------------................................................................................................................................................................................................................2411.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................GTTTGAAAGAGTCACGCGCTGGG--TCT....................................................................................................................................................................................................................................................................................2611.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTAC-------CTGCTGGAATCTCTCT.............................................................................................................2211.0010100000000
droPer2
CAC------A-T----------TTTCCACTCGAGAGGCA-------CAATGGCTAGTAGAATAATGCTCGTGGGAGCCCCGTCGAGAGAGAGAGCCATCTC--C-TGG---------------------------------------------------------------------------------------TCTGGGGCTGGCATGGGAGGGCATGGGA-------------------------------------------C-GGAAGGGG--GGCGCTTTGGTTTAGTTTGTCGCCGTCATTACACCGCTGCTGGTTCGCTGGCTGTATGGCTGTGAGGCTGCCTTGAAATTCAGTTGGT---TGTCGCCGTTTGAAAGAGTCACGCGCTGGG--TCTG---------CAT-----------------------------------------C-------------TCCG-------------------------CC----------------CACCTCCTGACCAAAGGCCATCGCGTTAC-------CTGCTGGAATCTCTCTCTCTCTCT-------------------------------------------------GTCTCTCTC---C-CCTACTCGCTCTGTCTCTGTCAAGGTCTCTCTTTTGACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................................................................................................GT---TGTCGCCGTTTGAAAGA......................................................................................................................................................................................................................................................................................................1911.001000001
.........................................................................................................................................................................................................................................................................................GCTTTGGTTTAGTTTGTCGCCGTC.......................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTACTCGCTCTGTCTCTGTC.................2111.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCGTTAC-------CTGCTGGAATC..................................................................................................................2111.001010000
droWil2
CCC------C-T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCAAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads

Generated: 05/17/2015 at 02:39 PM