ID:

dsi_30341

 Coordinate:

2r:2156922-2157071 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.7 -8.6 -8.6

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+
AT_richLow_complexityLow_complexity+
AT_richLow_complexityLow_complexity+
AT_richLow_complexityLow_complexity+
mature
  1. 2l:22144750-22144764 +
  2. dsi_30341  2r:2156951-2156965 -
  3. 3l:14533313-14533327 +
  4. x:6169547-6169561 +
  5. node_9900:914-928 -
  6. node_46884:15-29 -
  7. node_50966:6494-6508 -
star

Sense Strand Reads

GTTTTAAACAAATAAACTATGGTAGGTTGAATAAACTAAAATTTATTTTTAAAACATTTATTCTTTAAAATACATATTTCCAAAATACCAAATAGTTCATTTAGCATTTAAGGTAAAATATTTATGAAAGAAATATTAAAAATATTAAAAAAAACATTTTTGGCTTCAATGTAATCCGTTTTTCAAAACTATCTTTTCAGAAATTCTCCTCAGAAAGAAATATATGTAGAATTCATGGGTGCACAAATTA
**************************************************....................(((((....((((((((((((((.(((.....)))))))..)))).(((((((.(((........))).)))))))...........)))))).....)))))...........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 M024
male body		 M025
embryo
 SRR902008
ovaries
 GSM343915
embryo
..............................................................................................................................................................................................................TCCTCAGAAAGAAATATATGTAGAATT................. 27 0 1 21.00 21 12 8 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................TCCTCAGAAAGAAATATATGTAGAAT.................. 26 0 1 7.00 7 4 0 0 1 2 0 0 0 0 0
..............................................................................................................................................................................................................................TATGTAGAATTCATGGGTGCACAAAT.. 26 0 1 6.00 6 2 4 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TATATGTAGAATTCATGGGTGCACAAAT.. 28 0 1 5.00 5 2 3 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TCCTCAGAAAGAAATATATGTAGAATTCA............... 29 0 1 4.00 4 2 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TCAGAAAGAAATATATGTAGAATT................. 24 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TATATGTAGAATTCATGGGTGCACAAA... 27 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CTCCTCAGAAAGAAATATATGTAGAATT................. 28 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CCTCAGAAAGAAATATATGTAGAATT................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TATATGTAGAATTCATGGGTGCACA..... 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TTCTCCTCAGAAAGAAATATATGTAGAATT................. 30 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TATGTAGAATTCATGGGTGCACAAA... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TCCTCAGAAAGAAATATATGTAGAA................... 25 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
.............................................................................................................................................................................................................CTCCTCAGAAAGAAATATATGTAGAAA.................. 27 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................TCTCCTCAGAAAGAAATATATGTAGAA................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TATATGTAGAATTCAGGGGTGCACAAA... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TCTCCTCAGAAAGAAATGTATGTAGAATT................. 29 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CTCCTCAGAAAGAAATATATGTAGAAT.................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TCTCCTCAGAAAGAAATATA.......................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................AATATATGTAGAATTCATGGGTGCACAAA... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................AATATATGTAGAATTCATGG............ 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................................TGTAGAATTCATGGGTGCACAAAT.. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TATGTAGAATTCATGGGTGCAC...... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TCCTCAGAAAGAAATATATGTAGACT.................. 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................GAAAGAAATATATGTAGAATTCATGGG........... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TCCTCAGAAAGAAATATATGTAGAATTCAT.............. 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AAGAAATATATGTAGAATTCATGGG........... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAATATATGTAGAATTCATGGGTGC........ 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................................ATATGTAGAATTCATGGGTGCACA..... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................GAAAGAAATATATGTAGAATTCA............... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AAGAAATATATGTAGAATTCATGGGT.......... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TATGTAGAATTCATTGGTGCACAAA... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TGTAGAATTCATGGGTGCACAAA... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TATGTAGAATTCATGGGTGCACAAT... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TCTCCTCAGAAAGAAATATATGTAGAATT................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TGTAGAATTCATGGGTGCACAAATT. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................AATTCTCCTCAGAAAGAAATATATGTAGAATT................. 32 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TATATTTAGAATTCATGGGTGCACAAA... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TATGTAGAATTCATGGGTGCACAAATT. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................ATATATGTAGAATTCATGGGTGCAC...... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GAAATATATGTAGAATTCATGGGTGCA....... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TTCTCCTCAGAAAGAAATATATGTAGAA................... 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................TTTTTGGCTTCAATG............................................................................... 15 0 7 0.57 4 0 0 4 0 0 0 0 0 0 0
................................................TTAATACATTGGTTCTTTAAAA.................................................................................................................................................................................... 22 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
............................................................TTCTTTTAATTACATATTTACAAAA..................................................................................................................................................................... 25 3 5 0.20 1 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................TGTAATCCGGTTATCAAA............................................................... 18 2 14 0.07 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TCAAAACTATCTTTGAAGAC................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
......................................................................................................................................ATTAGAAATATTAAAAA................................................................................................... 17 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

CAAAATTTGTTTATTTGATACCATCCAACTTATTTGATTTTAAATAAAAATTTTGTAAATAAGAAATTTTATGTATAAAGGTTTTATGGTTTATCAAGTAAATCGTAAATTCCATTTTATAAATACTTTCTTTATAATTTTTATAATTTTTTTTGTAAAAACCGAAGTTACATTAGGCAAAAAGTTTTGATAGAAAAGTCTTTAAGAGGAGTCTTTCTTTATATACATCTTAAGTACCCACGTGTTTAAT
**************************************************....................(((((....((((((((((((((.(((.....)))))))..)))).(((((((.(((........))).)))))))...........)))))).....)))))...........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
..........................................................................................................................................................................................................................TTATATACATCTTAAGTACCCACGT....... 25 0 1 2.00 2 0 2 0 0 0 0
.........................................................................................................................................................................................TTTGGCAGACAAGTCTTTAAGA........................................... 22 3 6 1.83 11 11 0 0 0 0 0
........................................................................................................................................................................................TTTTGGCAGACAAGTCTTTAAGA........................................... 23 3 2 1.50 3 3 0 0 0 0 0
.................................................................................TATTATGTTTTATCAAGTAAAT................................................................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
.............................................................................................................................................................................TAGGCAAAAAGTTTTGATAGAAAAGT................................................... 26 0 1 1.00 1 0 0 0 1 0 0
.............................................................................................................................................................................................................GAGGACTCTTTCTTACTATA......................... 20 3 8 0.13 1 0 0 1 0 0 0
..........................................................................................................................ATACTTTCTTTATTTTTTTCAT.......................................................................................................... 22 3 20 0.05 1 0 0 0 0 1 0
............................................................................................................................................................................TTAGGCACAAAGTTCTG............................................................. 17 2 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:2156872-2157121 - dsi_30341 GTTTTAAACAAATA--AACTATGGTAGGTTGAATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAAAATTTATTTTTAA-AACATTTATTCTTT---AAAATACATATTTCCAAA-ATAC---------------------CAAATA--------------------GTTCA----------------------------TTTAGCATTTAAGGTA------------------------------------------------------------AAATAT--------------------------------------------------------------------------------------TTATGAAAGAAATATT--------------------------------------------AAAA---------------------ATATT-AAAAAAA-ACATTTTTGGCTTCAATGTAA----TCCGTTTTTC--------------AAAACTATCTTTTCAG----------------------------AAATTCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTAGAATTCATGGGTG--CACA--AATTA
droSec2 scaffold_59:46222-46495 - GTTTTAAACAAATA--AACTACGATAGGTTGAGT-------------------------------GC------------TGA----------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAAAGAAAAACATAAA--------------ACTAAAATTTATTTTTAA-AACATTTATTCTTT---AAAATACATATTTGCAAA-ATAC---------------------CAAGTA--------------------GTTCA----------------------------TTTAGCATTTAAGCTA------------------------------------------------------------AAATAT--------------------------------------------------------------------------------------TTATGAAAGAAATATT--------------------------------------------AAAA---------------------ATATT-GAAAAAA-ACATTTTTGGCTTTAATGTAA----TCCGTTTTTC--------------AAAACTATCTTTTCAG----------------------------AAATTCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTAGAATTCATGGGTG--CACA--AATTA
dm3 chr2R:1104891-1105154 - GTTTCAAACAGATA--AACTCCGGTAGGTTGAGT-------------------------------GC------------TAA----------T----------------------------------------------------------------------------------------------------------------GAA-------------------------------------------------------------------------------AAAGAAAAACATCAA--------------ACAAAAAAAAATTTTTAATAATATTTATTCTTT---AAAATACATTTTTGCGAA-ATAC---------------------CAAGTA--------------------GCTTATTAAA--------------------------ATTATTTAAGGTC------------------------------------------------------------AAATAT--------------------------------------------------------------------------------------TTATGAAAGGAATATG--------------------------------------------A----AA-------------------TAT--GA----A-A----TATGCCTTCGTTGTAA----TCCGTTTTTC--------------AAAACTATCTTTTCAG----------------------------AAATTCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTCGAATTCATGGGTG--CACA--AATTA
droEre2 scaffold_4929:21510427-21510622 + TTATTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---GAAATACAAGTTTGCGAAGTTAC---------------------CAAGTA--------------------GTTAA----------------------------TTTAGCATTTAAGGCC------------------------------------------------------------AAATAT------------------------------------------------------------------------------GATGTT--TTATGAATTAAATATG--------------------------------------------CAAA---------------------ACATT-GA--AAA-ACATTTTTCCGTC--CTTTAA----TCAGTTTTTC--------------AAAACTATATTTTCAG----------------------------AAATTCT-----------CCACAGAAAGAA--AT-----------------------TTATGTAGAATTCATGGGTG--CACA--AATAA
droYak3 v2_chr2L_random_028:1118214-1118498 - GTTTTAAAAGTCTC--GAT-TTTTAAAGTTATGTCGGATAAGTTATCCGACTT-C------------ATTGATGCCTATTTAAGCTGGCT---------GTATCGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAC---------------------AGCTAGCGCCAATTACCGAGTA--------------------CTTG--------------CCATGATATAAGCAATTATGCACATAAGGTA------------------------------------------------------------AAATAT--------------------------------------------------------------------------------------TTAAGCTAGATATATT-------AA--TGA------TA----------------------AAAA----------------------TAAGATA--CAAATCTTTTTCGCCTTTACTTTAA----TTGGCTTTTG--------------CTAATTTTCTTTTCAG----------------------------AAATTCT-----------CCACAGAAAGAA--AT-----------------------TTATGTAGAATTTATGGGTG--CACA--AATAA
droEug1 scf7180000408770:72725-72948 + GTTAAGT-TAAGTA--TAATA----------------------------------GTGATTAAGTGA------------CCA--------TTAAAATAAA------------TAAAAATTAAGTTAAGTAAAAAT-TTCAGA----------------ATAAAAAGTTTAAATTCAATTA--------------------------------------AAGAAATAT----------------------------------------------ATTTAA-G--ACTGAAAATTAAAATTGAAAA--ATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------TACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAA-----------------------------AAAGATATCGATTAAG----------------------------AAAGTTT-----------AAATTAAAAAAA--AA-TTAATTAACACTA---------AAATTTAGAATTCATCAAAT--CCTAAATATTG
droBia1 scf7180000302073:52055-52337 + GTTTTAAACTAAAA--GT-------------------------GGCCACTTTT-T------------GTTTATTAACGTTTAAACGGGAC------------TTTTTAC-------AACAATGTTTC------------GTA---------------AGTC----------------------------------AAAAGTTAAAGAATTGAGAACTATAGAGCCGTTTTTGA-----------------------------------------------GCAATCAGAAAATAAGCTTAAACA--AATCGGAATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAAAGCTGTT------------------------------------------------------------------------------------------------------------GCTTATAA--------------------------TTT--TTAAACGGCT--TTAGACAAATCAA----------GTTT------GAAAGAGGTAAAT-GATATTTTGG--------------------------AATAACTTTCAAACGATATATAGCAGAATC--CT---G---------------------TAGTTCACAAGTTATGGGTG--TACA--AATTA
droTak1 scf7180000415190:30688-30975 + ATGTTAAAAAAATTCTAGCTTCGGT----------------------------------------GTTT----------TTT----------GAAATAAAACCTTCTACTCTTGGAAATATTATTTTTTAAATAT-TTCCGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAAA-----------------------------------------------------A-AATTATATCAAAAATCGGACGACTATATCATATATGTAGCTGCCATAGGAACGATCGGAAAATTAATGGGAAAGTAATAGGAAATAAATTTAAGCTTTTTTGGTTTTCATTGTATTTT----------------------CTTCT---ACTTTAGG------------------------------------------------------------------------------------------------------------------------------------------------ACAT-GACTCTTTTT--------------------------AAATATTTC-----------CGAACGATCGAA--AAAT---------------------TAGTGGGAAATT-AATTGGA--AACA--AATTA
droEle1 scf7180000490751:636224-636471 + GGTTTAAAATAATA--AAT-ATTTTAAATTAAATAACATG---------ATATT-AA--------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------T-------CTGTAAAATGAGTTTCGTCTTGTAAATGATTTTAGGATTTACAAAAAAAAAACTAAGTTAAATATTAAATTCATTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAA------------------------------------------------------------TCATCTAATAATCGCA--------------------------------------------AAAA---------------------ATTGT-TGAAAAA-ACATTTATTGCTTCCA--TAT----TCATACTTTG--------------AAATGTTTTTCGTGAG----------------------------AATTTAT-----------C---AAAAATAT--GG-----------------------CAATTT---ATTCTTTCATT--TGAT--AATCA
droRho1 scf7180000771483:3986-4225 + TTCTAAA-TAATTA--AAATA----------------------------------GTTAATATACAA------------ATA--------TTTATATAAA------------TTTAATTTATATTATGATAATACGTATAAT----------------ATAAAAATACCACATATTTTTAAATCCGTA--------------------------------------T----------------------------------------------ATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAA------------------------TA----------------------CAATAAA-------------------TA---TA--AAA-ATAT----T-----CATCCTG----TTCAATCGCAAAATTTCTGA----------GGCTCCTAAAAATCGTT------CACACATCGTACGCTGAATACC-----------CTAATGATAATT--ATT----------------------CCAATGTGAAGTCATGTATG-----A--AATAA
droFic1 scf7180000453838:430511-430748 + TTTTTTATCCCACG--AGC-ATGATTTT---------------------------TTCAATATGAAG------------TTT----------T------------TTAACAACTCTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGAGAAAAAAGTTTCAT-----------------------AA-A----------------------------------------------------------------------------------------------------------------AATCGGACAACTATATCTTA----TAGCTGCCATAGGAAAGATCGAAAAATCTATATAGAAATAATGGAAATAAAATTATAACATCGTTCTTTTTCATCAGATAAG----------------------CATGT---TTTTTGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------------------------------ATAACACTGTGCGACAAAATTTAA---CGAAATGTTTG--TTTA--AGTTA
droKik1 scf7180000302698:898623-898900 - GATTTTTAAAATTT--T---AATT-----------------------TTTCCT-C------------AAAAATTATTGCACAATTTAAAA---------AAATTTTTAAAATTCTTAAAAATG---T---------------ACTAAAAAGTGTATCTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAA-ATGT---------------------TAAATG---------------------TTAA----------------------------ATTAGTATGTAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAAT--------------AACCTTATAAAAACGAACTGAGAACAGTTTTCCGATTAAAA--------------------------ATT--TGAAACTTTTTTGACTTTGTTTTAA----TATTTT---T------AAAGG---TTTACTTATTTTTTAA----------------------------AAAATTA-----------TTACATAAAA--TT---AT--------------------GGA-TAAATATTTACGTTTTTATAAA-CCTTTA
droAna3 scaffold_13770:607714-607944 - ATAACTGAACGATA--GGAAATGGTACAA--------------CCTT---------------------------------------------------------------------GA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTTAAAGATGTTTGTTGTATATAGGTATACAAAATTGCATA-TAAC----------------------AAATA-------T------------TCTTG----------------------------TTCGGCTCGTGTA--A-------------------------------------------------GAAA-------AAAAA---------------------------------------------ACAAAAAAAAATCAGAAACGTGCCGAATAAGAATGT---TTTTT--------------------------------------------------------------------------------------------ATAT-GTAATTTTGTAC---------------------------------------ACCTA---TATAGC----------------------------ATATTTT-----------CGTCACTAAAAT--TG-----------------------ATATCAGATATTTTGGGTTT-----C--GCGTG
droBip1 scf7180000391960:833-1055 + AAACAAAAAAACG-------ATCGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA---------------------------------------------------------------------AAAAAA-----------------------------------------------G-TCCA---------------------CTTGTTTTAGTTTTTTTCAACAAACCATT------------------------------CTTATTATATATACTA------------------------------------------------------------TATTAT--------------------------------------------------------------------------------------TTAT--ACTATATATT--------------------------------------------ATAC---------------------ATTTT-TTTAAAT-ATATTTTTGTATTCATTTCCACAAGTTCGTCCCTAATAATTAAAA----------GTCTTCTTAGTCGTC--------CTCCTTA-----AC-AATTTA------------TC--AG--------AA-----------------------TTATTCTTAATAAATGATTT--CGTA--TTTTA
dp5 Unknown_singleton_93:740-996 + TGTTTTAACAAACA--TGTTAATGC-------GT-------------------------------AC------------TCA----------TAAATGAAAGCTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATATTTTTAGATCTGTATTCTCTTT---CGAATTCGTGAGAGCAAG-GCGG---------------------CGTGTATTTCGTCTTTTCAAA-----------------------------------------------------A------------------------------------------------------------AA--------------------------------------------------------A----------------------CATAT---TGTCTTTGTTATAACTCTGTGTTACAATTC------------------------------------------------------------------------GCATTGTTGCTCTCTAGGTAA----TCGGTGTCCC-------------------------CCTAGATTTTTATTTGATCGATTTG------G-AAAATA------------TCTCAAGCTAAA--AT-----------------------CTGTCGAGATCTCTCTAAGC--CACA--A--CT
droPer2 scaffold_6:2945424-2945697 - ACTTTAAATAAATA--TCT-TTGGCGATTTAAATTATATAAAATATAAAAT--------------------------------------------------------AAAAATTCAAAT-ATATTTT---------------GAGCGGGGATATGTCTATCAAAAAGTTCCATATCTTTCGTTTGGTATATGTCCTTAAGTAAAAGA-----------------------------------------------------ATGAAATATTAATAGGATAAATAATAAGAATACGAATCTGAACATTATTAGGAATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAA-----TATTCTGCTATAGCAAATTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACAGGAAA--TA---GTAATTAAAAATATGCATTAATATATGTAGAA---AATTCTG--CAGA--AATGA
droWil2 scf2_1100000004954:593185-593419 - AATCGTTATAAGTT----------------ATATTATAAAACTTATTTGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATTTCGGTTTT---TTAAAATATTTTTTAAAA-AGACCATAAATTTTGAGTA--------------------------------------------------------------------ATTTAATAAGAAC------------------------------------------------------------AATCTT----------------------------------TTTTGATAAAAAAAATAAAAATCAAAA--ATAATGATTACAA-------------------------------------------------------------------------------------------------------------------ATGATTTTTATTTTT----TTCGCTCAAA---------AT---AAAACTTACTTTTGAA----------------------------AAA-CGT-----------CTTCTGTGTTAA--AT-----------------------ATTTTCA--AAATATTTTTA--CACA--TCCTT
droVir3 scaffold_13050:3040920-3041154 - TTTCAAA-GAAATA--ACGTA----------------------------ACATT-ATGGATGTGTAG------------TTA----------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGAACTTA-----AT--------------------------------------------------TATTTTGAACAAAATCTTTTGTTT---ATAAATTTTTTTTG--------------------------------------------------------------------------CTATAAAATAATAAA-----------ATGTAAAAATATG--------------------------------------------------------------------------------------------------------------------------------------------------ATAAAAATAATATG--------------------------------------------A----ATTAAAAAAAATTATTTAAGATTTA-TGGGAAT-ATACTCATGTAAACATTTCAAAGTATA-----------------------------------------------------------------------AA-----------GATATAAAATAT--AA-----------------------AAATGTAAAATTCAT---TA--TAGT--AATTT
droMoj3 scaffold_6500:17812240-17812487 + AATAAAAATAAATA--AATAAATAA--ATAAAATAA-ATA---------AATAA-AT--------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------T-------ATGTATATGAAATTTATTTTTGTAATTT-----AT------------------------------------------------------------------------------------GTAT-ATCTAA-AAAT---------------------TATTTA--------------------TTTTATTTATTTTTTTTTTTAT----TAATAAT-----------TTACAAATTTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------TT----AAAATTCGCATCAATATT----------------------CTATAAT-------------------TG---TT--TGT-ATGT----C-----CATTTTA----CCTTTATTAC--------------TAAATTA----TGACC----------------------------AAATTCT-----------CAACAGTCCAAA--AT-----------------------GA------TTCTCATGCCTC--AGCT--ATCTA
droGri2 scaffold_15126:8013223-8013464 - ATTTTTGAAAACTA--GAATACAATAAAT--------------AATTGTTCTT-C------------ATGTATTAATATTTAAATAGTAA---------AGATTAATATTAATTTAAATATTAAT----------------------------------------------------------------------------------------AAATATATATTTTTTTTTAAAGTGACA-----AAA------------ATAAAATATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGGATATGCATAT---------------------------------------------------------------------------------------------------------------------------------TAATAGTCAATTATAAAATCCATATGGATATC---------------------------------------------------------------A---TTTAAAT--CTATAA----TTTTTATTTC--------------AAAAT--------------------------------------------------------------TAATAAA--AT-----------------------ACATTTTTAACTAAACTGTA--CTCA--AACTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTTTTAAACAAATA--AACTATGGTAGGTTGAATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAAAATTTATTTTTAA-AACATTTATTCTTT---AAAATACATATTTCCAAA-ATAC---------------------CAAATA--------------------GTTCA----------------------------TTTAGCATTTAAGGTA------------------------------------------------------------AAATAT--------------------------------------------------------------------------------------TTATGAAAGAAATATT--------------------------------------------AAAA---------------------ATATT-AAAAAAA-ACATTTTTGGCTTCAATGTAA----TCCGTTTTTC--------------AAAACTATCTTTTCAG----------------------------AAATTCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTAGAATTCATGGGTG--CACA--AATTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------CCTCAGAAAGAA--AT-----------------------ATATGTAGAATT.....................27121.0021000000812100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------CCTCAGAAAGAA--AT-----------------------ATATGTAGAAT......................2617.00700000004210000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAGAATTCATGGGTG--CACA--AAT..2616.00600000042000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------ATATGTAGAATTCATGGGTG--CACA--AAT..2815.00500000032000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------CCTCAGAAAGAA--AT-----------------------ATATGTAGAATTCA...................2914.00400000022000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAAAGAA--AT-----------------------ATATGTAGAATT.....................2414.00400000013000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------ATATGTAGAATTCATGGGTG--CACA--AA...2714.00400000013000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-----------CCTCAGAAAGAA--AT-----------------------ATATGTAGAATT.....................2813.00300000021000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCAGAAAGAA--AT-----------------------ATATGTAGAATT.....................2612.00200000002000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------ATATGTAGAATTCATGGGTG--CACA--.....2512.00200000011000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTAGAATT.....................3012.00200000020000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAGAATTCATGGGTG--CACA--AA...2512.00200000002000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------CCTCAGAAAGAA--AT-----------------------ATATGTAGAA.......................2512.00200000000020000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-----------CCTCAGAAAGAA--AT-----------------------ATATGTAGAAA......................2711.00100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTAGAA.......................2711.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-----------CCTCAGAAAGAA--AT-----------------------ATATGTAGAAT......................2711.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT-----------CCTCAGAAAGAA--AT-----------------------ATA..............................2011.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AT-----------------------ATATGTAGAATTCATGGGTG--CACA--AA...2911.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AT-----------------------ATATGTAGAATTCATGG................2011.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAGAATTCATGGGTG--CACA--AAT..2411.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAGAATTCATGGGTG--CAC........2211.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAA--AT-----------------------ATATGTAGAATTCATGGG...............2711.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------CCTCAGAAAGAA--AT-----------------------ATATGTAGAATTCAT..................3011.00100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAA--AT-----------------------ATATGTAGAATTCATGGG...............2511.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--AT-----------------------ATATGTAGAATTCATGGGTG--C..........2511.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTAGAATTCATGGGTG--CACA--.....2411.00100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAA--AT-----------------------ATATGTAGAATTCA...................2311.00100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAA--AT-----------------------ATATGTAGAATTCATGGGT..............2611.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAGAATTCATGGGTG--CACA--AA...2311.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAGAATTCATGGGTG--CACA--AT...2511.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTAGAATT.....................2911.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAGAATTCATGGGTG--CACA--AATT.2511.00100000000010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTAGAATT.....................3211.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAGAATTCATGGGTG--CACA--AATT.2711.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-----------------------ATATGTAGAATTCATGGGTG--CAC........2511.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA--AT-----------------------ATATGTAGAATTCATGGGTG--CA.........2711.00100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTAGAA.......................2811.00100000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGCTTCAATG.....................................................................................................................................................................1570.57400000000004000000
droSec2
GTTTTAAACAAATA--AACTACGATAGGTTGAGT-------------------------------GC------------TGA----------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAAAGAAAAACATAAA--------------ACTAAAATTTATTTTTAA-AACATTTATTCTTT---AAAATACATATTTGCAAA-ATAC---------------------CAAGTA--------------------GTTCA----------------------------TTTAGCATTTAAGCTA------------------------------------------------------------AAATAT--------------------------------------------------------------------------------------TTATGAAAGAAATATT--------------------------------------------AAAA---------------------ATATT-GAAAAAA-ACATTTTTGGCTTTAATGTAA----TCCGTTTTTC--------------AAAACTATCTTTTCAG----------------------------AAATTCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTAGAATTCATGGGTG--CACA--AATTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
GTTTCAAACAGATA--AACTCCGGTAGGTTGAGT-------------------------------GC------------TAA----------T----------------------------------------------------------------------------------------------------------------GAA-------------------------------------------------------------------------------AAAGAAAAACATCAA--------------ACAAAAAAAAATTTTTAATAATATTTATTCTTT---AAAATACATTTTTGCGAA-ATAC---------------------CAAGTA--------------------GCTTATTAAA--------------------------ATTATTTAAGGTC------------------------------------------------------------AAATAT--------------------------------------------------------------------------------------TTATGAAAGGAATATG--------------------------------------------A----AA-------------------TAT--GA----A-A----TATGCCTTCGTTGTAA----TCCGTTTTTC--------------AAAACTATCTTTTCAG----------------------------AAATTCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTCGAATTCATGGGTG--CACA--AATTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------CCTCAGAAAGAA--AT-----------------------ATATGTCGAA.......................25146.00460000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000101002011100000000000000000000000000000000000011200000000000001040204000300000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000003521600000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGAATTCATGGGTG--CACA--AAT..26144.00440000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000001000000010008000400030908140000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------ATATGTCGAATTCATGGGTG--CACA--.....25118.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000101000000000000000000000000000000000000000000000000000000100000000000000020702020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTCGAA.......................27118.00180000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000100000000000000010004000100110000030000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000101000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------CCTCAGAAAGAA--AT-----------------------ATATGTCGAAT......................26117.00170000000000000000000001010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000010100000410000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000300000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTCGAA.......................28111.00110000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000001000000010103010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGAAAGAA--AT-----------------------ATATGTCGAATT.....................2519.0090000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100100000000000000000000000100200000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------CCTCAGAAAGAA--AT-----------------------ATATGTCGAATT.....................2718.0080000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGAATTCATGGGTG--CACA--AATT.2718.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000110020101010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGAATTCATGGGTG--CACA--AA...2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000002000000000000000000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAAAGAA--AT-----------------------ATATGTCGAATT.....................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000100000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000001000000
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....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-----------CCTCAGAAAGAA--AT-----------------------ATATGTCGAAT......................2714.0040000000000000000000000000000000000000100000000000100000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCAGAAAGAA--AT-----------------------ATATGTCGAATT.....................2614.0040000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------ATATGTCGAATTCATGGGTG--C..........2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
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................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------ATATGTCGAATTCATGGGTG--CACA--AA...2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCAGAAAGAA--AT-----------------------ATATGTCGAATTCA...................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTCG.........................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------CCTCAGAAAGAA--AT-----------------------ATATGTCG.........................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAA--AT-----------------------ATATGTCGAATTCATGGGT..............2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGAATTCATGGGTG--CACA--A....2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTCG.........................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-----------CCTCAGAAAGAA--AT-----------------------ATATGTCGAATT.....................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCCTTCGTTGTAA----TCCGTTTTTC--------------......................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGAAAGAA--AT-----------------------ATATGTCGAA.......................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCAGAAAGAA--AT-----------------------ATATGTCGAATTC....................2712.0020000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTC..........................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCGAATTCATGGGTG--CACA--AAT..2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AT-----------------------ATATGTCGAATTCATGGGT..............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGAATTCATGGGTG--CACA--A....2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAA--AT-----------------------ATATGTCGAATTCATGGGT..............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAA--AT-----------------------ATATGTCGAATTCATGGG...............2712.0020000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA--AT-----------------------ATATGTCGAATTCATG.................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGAATTCATGGGTG--CACA--AAT..2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAA--AT-----------------------ATATGTCGAATTCATGGGT..............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTCG.........................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGAATTCATGGGTG--CACA--.....2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGAATTCATGGGTG--CACA--.....2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCAGAAAGAA--AT-----------------------ATATGTCGAAT......................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGAATTCATGGGTG--CACA--AAT..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCT-----------CCTCAGAAAGAA--AT-----------------------ATATG............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-----------CCTCAGAAAGAA--AT-----------------------ATATGTCGAA.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------------------AAATTCT-----------CCTCAGAAAGAA--AT-----------------------AT...............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCAGAAAGAA--AT-----------------------ATATGTCGAA.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGAAAGAA--AT-----------------------ATATGTCGAATTC....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAAAGAA--AT-----------------------ATATGTCGAATTCATG.................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCATGGGTG--CACA--AAT..1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCGAATTCATGGGTG--CACA--AA...2611.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCGAATTCATGGGTG--CACA--.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------CCTCAGAAAGAA--AT-----------------------AT...............................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AT-----------------------ATATGTCGAATTCATGGGTG--CA.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCATGGGTG--CACA--AAT..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------------------AAATTCT-----------CCTCAGAAAGAA--AT-----------------------ATATG............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------ATATGTCGAATTCATGGG...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGAAAGAA--AT-----------------------ATATGTCGAAT......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGAATTCATGGGTG--CACA--AAA..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA--AT-----------------------ATATGTCGAATTCATGGG...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCT-----------CCTCAGAAAGAA--AT-----------------------.................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAAAGAA--AT-----------------------ATATGTCGAATTCA...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-----------------------ATATGTCGAATTCATGGGTG--CA.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--AT-----------------------ATATGTCGAATTCATGGGTG--C..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------------------AAATTCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTC..........................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT-----------CCTCAGAAAGAA--AT-----------------------ATATGTCCC........................2611.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AT-----------------------ATATGTCGAATTCATGGG...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGAATTCATGGGTG--C..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGAAAGAA--AT-----------------------ATATGTCGAATTCA...................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAAAGAA--AT-----------------------ATATGTCGA........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAA--AT-----------------------ATATGTCGAATTCATGG................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAA--AT-----------------------ATATGTCGAATTCATG.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAA--AT-----------------------ATATGTCGAATTCATGGT...............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------------------AAATTCT-----------CCTCAGAAAGAA--AT-----------------------ATA..............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAA--AT-----------------------ATATGTCGAATTCATGGGTG--C..........2711.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGAATTCATGGGTG--...........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGAATTCATGGGTG--C..........1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGAATTCATGGGTG--CACA--.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------CCTCAGAAAGAA--AT-----------------------ATATGTCGAATTC....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTTTTTC--------------AAAACTATCTTTT.........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAA--AT-----------------------ATATGTCGAATTCATGGGTG--...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------CCTCAGAAAGAA--AT-----------------------ATATGTCGA........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-----------CCTCAGAAAGAA--AT-----------------------ATATGTCG.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------------------AAATTCT-----------CCTCAGAAAGAA--AT-----------------------ATATGT...........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGAATTCATGGGTG--CACA--AA...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGAATTCATGGGTG--CA.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAA--AT-----------------------ATATGTCGAATTCATGGGT..............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGAAAGAA--AT-----------------------ATATG............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AT-----------------------ATATGTCGAATTCATGGGTG--CACA--.....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA--AT-----------------------ATATGTCGAATTCATGGGT..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGAATTCATGGGTG--CACA--AATT.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TTGAGT-------------------------------GC------------TAA----------T----------------------------------------------------------------------------------------------------------------GAA-------------------------------------------------------------------------------AAAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......ACAGATA--AACTCCGGTAGGTTGAGT-------------------------------GC------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GATA--AACTCCGGTAGGTTGAGT-------------------------------GC------------T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTCCGGTAGGTTGAGT-------------------------------GC------------TAA----------T----------------------------------------------------------------------------------------------------------------GAA-------------------------------------------------------------------------------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................AA----------T----------------------------------------------------------------------------------------------------------------GAA-------------------------------------------------------------------------------AAAGAAAAACATCAA--------------ACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TACATTTTTGCGAA-ATAC---------------------CAAGTA--------------------GCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GTTGAGT-------------------------------GC------------TAA----------T----------------------------------------------------------------------------------------------------------------GAA-------------------------------------------------------------------------------AAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............A--AACTCCGGTAGGTTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GAGT-------------------------------GC------------TAA----------T----------------------------------------------------------------------------------------------------------------GAA-------------------------------------------------------------------------------AAAGAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................T---AAAATACATTTTTGCGAA-ATAC---------------------CAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTATTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---GAAATACAAGTTTGCGAAGTTAC---------------------CAAGTA--------------------GTTAA----------------------------TTTAGCATTTAAGGCC------------------------------------------------------------AAATAT------------------------------------------------------------------------------GATGTT--TTATGAATTAAATATG--------------------------------------------CAAA---------------------ACATT-GA--AAA-ACATTTTTCCGTC--CTTTAA----TCAGTTTTTC--------------AAAACTATATTTTCAG----------------------------AAATTCT-----------CCACAGAAAGAA--AT-----------------------TTATGTAGAATTCATGGGTG--CACA--AATAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGTAGAATTCATGGGTG--CAC........2311.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------------------AAATTCT-----------CCACAGAAAGAA--A.........................................................2111.0010100000
droYak3
GTTTTAAAAGTCTC--GAT-TTTTAAAGTTATGTCGGATAAGTTATCCGACTT-C------------ATTGATGCCTATTTAAGCTGGCT---------GTATCGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAC---------------------AGCTAGCGCCAATTACCGAGTA--------------------CTTG--------------CCATGATATAAGCAATTATGCACATAAGGTA------------------------------------------------------------AAATAT--------------------------------------------------------------------------------------TTAAGCTAGATATATT-------AA--TGA------TA----------------------AAAA----------------------TAAGATA--CAAATCTTTTTCGCCTTTACTTTAA----TTGGCTTTTG--------------CTAATTTTCTTTTCAG----------------------------AAATTCT-----------CCACAGAAAGAA--AT-----------------------TTATGTAGAATTTATGGGTG--CACA--AATAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................TAAGTTATCCGACTT-C------------ATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
droEug1
GTTAAGT-TAAGTA--TAATA----------------------------------GTGATTAAGTGA------------CCA--------TTAAAATAAA------------TAAAAATTAAGTTAAGTAAAAAT-TTCAGA----------------ATAAAAAGTTTAAATTCAATTA--------------------------------------AAGAAATAT----------------------------------------------ATTTAA-G--ACTGAAAATTAAAATTGAAAA--ATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------TACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAA-----------------------------AAAGATATCGATTAAG----------------------------AAAGTTT-----------AAATTAAAAAAA--AA-TTAATTAACACTA---------AAATTTAGAATTCATCAAAT--CCTAAATATTGSizeHit CountTotal NormTotal
No Reads
droBia1
GTTTTAAACTAAAA--GT-------------------------GGCCACTTTT-T------------GTTTATTAACGTTTAAACGGGAC------------TTTTTAC-------AACAATGTTTC------------GTA---------------AGTC----------------------------------AAAAGTTAAAGAATTGAGAACTATAGAGCCGTTTTTGA-----------------------------------------------GCAATCAGAAAATAAGCTTAAACA--AATCGGAATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAAAGCTGTT------------------------------------------------------------------------------------------------------------GCTTATAA--------------------------TTT--TTAAACGGCT--TTAGACAAATCAA----------GTTT------GAAAGAGGTAAAT-GATATTTTGG--------------------------AATAACTTTCAAACGATATATAGCAGAATC--CT---G---------------------TAGTTCACAAGTTATGGGTG--TACA--AATTASizeHit CountTotal NormTotal
No Reads
droTak1
ATGTTAAAAAAATTCTAGCTTCGGT----------------------------------------GTTT----------TTT----------GAAATAAAACCTTCTACTCTTGGAAATATTATTTTTTAAATAT-TTCCGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAAA-----------------------------------------------------A-AATTATATCAAAAATCGGACGACTATATCATATATGTAGCTGCCATAGGAACGATCGGAAAATTAATGGGAAAGTAATAGGAAATAAATTTAAGCTTTTTTGGTTTTCATTGTATTTT----------------------CTTCT---ACTTTAGG------------------------------------------------------------------------------------------------------------------------------------------------ACAT-GACTCTTTTT--------------------------AAATATTTC-----------CGAACGATCGAA--AAAT---------------------TAGTGGGAAATT-AATTGGA--AACA--AATTASizeHit CountTotal NormTotal
No Reads
droEle1
GGTTTAAAATAATA--AAT-ATTTTAAATTAAATAACATG---------ATATT-AA--------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------T-------CTGTAAAATGAGTTTCGTCTTGTAAATGATTTTAGGATTTACAAAAAAAAAACTAAGTTAAATATTAAATTCATTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAA------------------------------------------------------------TCATCTAATAATCGCA--------------------------------------------AAAA---------------------ATTGT-TGAAAAA-ACATTTATTGCTTCCA--TAT----TCATACTTTG--------------AAATGTTTTTCGTGAG----------------------------AATTTAT-----------C---AAAAATAT--GG-----------------------CAATTT---ATTCTTTCATT--TGAT--AATCASizeHit CountTotal NormTotal
No Reads
droRho1
TTCTAAA-TAATTA--AAATA----------------------------------GTTAATATACAA------------ATA--------TTTATATAAA------------TTTAATTTATATTATGATAATACGTATAAT----------------ATAAAAATACCACATATTTTTAAATCCGTA--------------------------------------T----------------------------------------------ATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAA------------------------TA----------------------CAATAAA-------------------TA---TA--AAA-ATAT----T-----CATCCTG----TTCAATCGCAAAATTTCTGA----------GGCTCCTAAAAATCGTT------CACACATCGTACGCTGAATACC-----------CTAATGATAATT--ATT----------------------CCAATGTGAAGTCATGTATG-----A--AATAASizeHit CountTotal NormTotal
No Reads
droFic1
TTTTTTATCCCACG--AGC-ATGATTTT---------------------------TTCAATATGAAG------------TTT----------T------------TTAACAACTCTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGAGAAAAAAGTTTCAT-----------------------AA-A----------------------------------------------------------------------------------------------------------------AATCGGACAACTATATCTTA----TAGCTGCCATAGGAAAGATCGAAAAATCTATATAGAAATAATGGAAATAAAATTATAACATCGTTCTTTTTCATCAGATAAG----------------------CATGT---TTTTTGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------------------------------ATAACACTGTGCGACAAAATTTAA---CGAAATGTTTG--TTTA--AGTTASizeHit CountTotal NormTotal
No Reads
droKik1
GATTTTTAAAATTT--T---AATT-----------------------TTTCCT-C------------AAAAATTATTGCACAATTTAAAA---------AAATTTTTAAAATTCTTAAAAATG---T---------------ACTAAAAAGTGTATCTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAA-ATGT---------------------TAAATG---------------------TTAA----------------------------ATTAGTATGTAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAAT--------------AACCTTATAAAAACGAACTGAGAACAGTTTTCCGATTAAAA--------------------------ATT--TGAAACTTTTTTGACTTTGTTTTAA----TATTTT---T------AAAGG---TTTACTTATTTTTTAA----------------------------AAAATTA-----------TTACATAAAA--TT---AT--------------------GGA-TAAATATTTACGTTTTTATAAA-CCTTTASizeHit CountTotal NormTotal
No Reads
droAna3
ATAACTGAACGATA--GGAAATGGTACAA--------------CCTT---------------------------------------------------------------------GA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTTAAAGATGTTTGTTGTATATAGGTATACAAAATTGCATA-TAAC----------------------AAATA-------T------------TCTTG----------------------------TTCGGCTCGTGTA--A-------------------------------------------------GAAA-------AAAAA---------------------------------------------ACAAAAAAAAATCAGAAACGTGCCGAATAAGAATGT---TTTTT--------------------------------------------------------------------------------------------ATAT-GTAATTTTGTAC---------------------------------------ACCTA---TATAGC----------------------------ATATTTT-----------CGTCACTAAAAT--TG-----------------------ATATCAGATATTTTGGGTTT-----C--GCGTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------AAAAA---------------------------------------------ACAAAAAAAAATC.......................................................................................................................................................................................................................................................................................................................20150.071010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------------------------GAAA-------AAAAA---------------------------------------------ACAAAAAAAAA.........................................................................................................................................................................................................................................................................................................................21190.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---------------------------------------ACCTA---TATAGC----------------------------ATATTTT-----------C.......................................................................21200.051010000
droBip1
AAACAAAAAAACG-------ATCGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA---------------------------------------------------------------------AAAAAA-----------------------------------------------G-TCCA---------------------CTTGTTTTAGTTTTTTTCAACAAACCATT------------------------------CTTATTATATATACTA------------------------------------------------------------TATTAT--------------------------------------------------------------------------------------TTAT--ACTATATATT--------------------------------------------ATAC---------------------ATTTT-TTTAAAT-ATATTTTTGTATTCATTTCCACAAGTTCGTCCCTAATAATTAAAA----------GTCTTCTTAGTCGTC--------CTCCTTA-----AC-AATTTA------------TC--AG--------AA-----------------------TTATTCTTAATAAATGATTT--CGTA--TTTTASizeHit CountTotal NormTotal
No Reads
dp5
TGTTTTAACAAACA--TGTTAATGC-------GT-------------------------------AC------------TCA----------TAAATGAAAGCTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATATTTTTAGATCTGTATTCTCTTT---CGAATTCGTGAGAGCAAG-GCGG---------------------CGTGTATTTCGTCTTTTCAAA-----------------------------------------------------A------------------------------------------------------------AA--------------------------------------------------------A----------------------CATAT---TGTCTTTGTTATAACTCTGTGTTACAATTC------------------------------------------------------------------------GCATTGTTGCTCTCTAGGTAA----TCGGTGTCCC-------------------------CCTAGATTTTTATTTGATCGATTTG------G-AAAATA------------TCTCAAGCTAAA--AT-----------------------CTGTCGAGATCTCTCTAAGC--CACA--A--CTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................................TT---CGAATTCGTGAGAGCAAG-GCGG---------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2421.0020000000110
............................................................................................................................................................................................................................................................................................................................................................T---CGAATTCGTGAGAGCAAG-GCGG---------------------CG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000010
.................................................................................................................................................................................................................................................................................................................................................................GAATTCGTGAGAGCAAG-GCGG---------------------CGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000010
...........................................................................................................................................................................................................................................................................................................................................TAGATCTGTATTCTCTTT---CGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000010
......................TGC-------GT-------------------------------AC------------TCA----------TAAATGAAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCTCTAGGTAA----TCGGTGTC......................................................................................................................................................2240.2510000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGCTCTCTAGGTAA----TCGG..........................................................................................................................................................2140.2510000000010
droPer2
ACTTTAAATAAATA--TCT-TTGGCGATTTAAATTATATAAAATATAAAAT--------------------------------------------------------AAAAATTCAAAT-ATATTTT---------------GAGCGGGGATATGTCTATCAAAAAGTTCCATATCTTTCGTTTGGTATATGTCCTTAAGTAAAAGA-----------------------------------------------------ATGAAATATTAATAGGATAAATAATAAGAATACGAATCTGAACATTATTAGGAATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAA-----TATTCTGCTATAGCAAATTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACAGGAAA--TA---GTAATTAAAAATATGCATTAATATATGTAGAA---AATTCTG--CAGA--AATGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
AATCGTTATAAGTT----------------ATATTATAAAACTTATTTGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATTTCGGTTTT---TTAAAATATTTTTTAAAA-AGACCATAAATTTTGAGTA--------------------------------------------------------------------ATTTAATAAGAAC------------------------------------------------------------AATCTT----------------------------------TTTTGATAAAAAAAATAAAAATCAAAA--ATAATGATTACAA-------------------------------------------------------------------------------------------------------------------ATGATTTTTATTTTT----TTCGCTCAAA---------AT---AAAACTTACTTTTGAA----------------------------AAA-CGT-----------CTTCTGTGTTAA--AT-----------------------ATTTTCA--AAATATTTTTA--CACA--TCCTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTGTTAA--AT-----------------------ATTTTCA--AAATAT..................2530.33101000
droVir3
TTTCAAA-GAAATA--ACGTA----------------------------ACATT-ATGGATGTGTAG------------TTA----------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGAACTTA-----AT--------------------------------------------------TATTTTGAACAAAATCTTTTGTTT---ATAAATTTTTTTTG--------------------------------------------------------------------------CTATAAAATAATAAA-----------ATGTAAAAATATG--------------------------------------------------------------------------------------------------------------------------------------------------ATAAAAATAATATG--------------------------------------------A----ATTAAAAAAAATTATTTAAGATTTA-TGGGAAT-ATACTCATGTAAACATTTCAAAGTATA-----------------------------------------------------------------------AA-----------GATATAAAATAT--AA-----------------------AAATGTAAAATTCAT---TA--TAGT--AATTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................TGTGTAG------------TTA----------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGAACTTA-----AT--------------------------------------------------TA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2762.0012000000000000000000000000105311100000000000000000000000000000000
............................................................TGTGTAG------------TTA----------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGAACTTA-----AT--------------------------------------------------TAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2860.674000000000000000000000000011010001000000000000000000000000000000
............TA--ACGTA----------------------------ACATT-ATGGATGTGTAG------------T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.574001000000000000000000000000001000000001000100000000000000000000
............TA--ACGTA----------------------------ACATT-ATGGATGTGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.504300000000000000000000000000100000000000000000000000000000000000
............TA--ACGTA----------------------------ACATT-ATGGATGTGTAG------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.433000000000000000000000000000110000000001000000000000000000000000
............................................................TGTGTAG------------TTA----------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGAACTTA-----AT--------------------------------------------------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.332000000000000000000000000000002000000000000000000000000000000000
............................................................TGTGTAG------------TTA----------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGAACTTA-----A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.332000000000000000000000000001000001000000000000000000000000000000
........................................................TGGATGTGTAG------------TTA----------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.332001001000000000000000000000000000000000000000000000000000000000
............................................................TGTGTAG------------TTA----------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGAACTTA-----AT--------------------------------------------------T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.332000000000000000000000000000110000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-----------------------------------------------------------------------AA-----------GATATAAAATAT--AA-----------------------AAATGT...........................2440.251000000000000000000000000001000000000000000000000000000000000000
.............................................................GTGTAG------------TTA----------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGAACTTA-----AT--------------------------------------------------TAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2760.171000000000000000000000000000001000000000000000000000000000000000
..........................................................GATGTGTAG------------TTA----------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGAACTTA-----........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.171000000000000000000000000010000000000000000000000000000000000000
............................................................TGTGTAG------------TTA----------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGAACTTA-----AT--------------------------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.171000000000000000000000000000001000000000000000000000000000000000
........................................................TGGATGTGTAG------------TTA----------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGAACTTA-----A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2860.171000000000000000000000000000000010000000000000000000000000000000
........................................................TGGATGTGTAG------------TTA----------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGAACTTA-----........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2760.171000000000000000000000000000100000000000000000000000000000000000
............................................................TGTGTAG------------TTA----------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGAACTTA-----........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.171000000000000000000000000010000000000000000000000000000000000000
............TA--ACGTA----------------------------ACATT-ATGGATGTGTAG------------G.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.141100000000000000000000000000000000000000000000000000000000000000
...................TA----------------------------ACATT-ATGGATGTGTAG------------TTA----------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.141000000000000000000000000001000000000000000000000000000000000000
................ACGTA----------------------------ACATT-ATGGATGTGTAG------------T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.111000000001000000000000000000000000000000000000000000000000000000
....AAA-GAAATA--ACGTA----------------------------ACATT-AT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.071000000000000000000000000000000000000010000000000000000000000000
............................................................TGTGTAG------------TTA----------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18150.071000000000000000000000000100000000000000000000000000000000000000
droMoj3
AATAAAAATAAATA--AATAAATAA--ATAAAATAA-ATA---------AATAA-AT--------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------T-------ATGTATATGAAATTTATTTTTGTAATTT-----AT------------------------------------------------------------------------------------GTAT-ATCTAA-AAAT---------------------TATTTA--------------------TTTTATTTATTTTTTTTTTTAT----TAATAAT-----------TTACAAATTTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------TT----AAAATTCGCATCAATATT----------------------CTATAAT-------------------TG---TT--TGT-ATGT----C-----CATTTTA----CCTTTATTAC--------------TAAATTA----TGACC----------------------------AAATTCT-----------CAACAGTCCAAA--AT-----------------------GA------TTCTCATGCCTC--AGCT--ATCTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ATTTTTGAAAACTA--GAATACAATAAAT--------------AATTGTTCTT-C------------ATGTATTAATATTTAAATAGTAA---------AGATTAATATTAATTTAAATATTAAT----------------------------------------------------------------------------------------AAATATATATTTTTTTTTAAAGTGACA-----AAA------------ATAAAATATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGGATATGCATAT---------------------------------------------------------------------------------------------------------------------------------TAATAGTCAATTATAAAATCCATATGGATATC---------------------------------------------------------------A---TTTAAAT--CTATAA----TTTTTATTTC--------------AAAAT--------------------------------------------------------------TAATAAA--AT-----------------------ACATTTTTAACTAAACTGTA--CTCA--AACTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 06:46 PM