ID:

dsi_30301

 Coordinate:

3r:235398-235642 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AAATTCCAAGCCGGGTCCCACGTCCTTGGGCAGCCGGGGAAATATGCTAAGTAAGCGCGGGAACACACTGTTAATCCCGACTACTGTCGAGGGCATTGCGAGGCGGCTTCCCCCACAGACCCAAATCCATACACCTGAACATAGAAATATGCGAATGGTCGCTAGCATACCACCACCCCATGGGTGCACCACACCCATTGAGGCGTATGCAAATGTATAGGCATTGCGAATGCATATGCACCCATTCTCTAGCCTACTTTTTAAATACGTTTTGTTGCTTCTTTTTCTTTTTTAGTTGTACAAAGCTTACTTATCATAAGTATCCCAGCGGATTGTATAATACAA
*************************************************************************************(((..(((....((......))....)))...))).............................**************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M024
male body		 M025
embryo
 SRR902009
testis
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
.....................................................................................GTCGAGGGCATTGCGAGGC................................................................................................................................................................................................................................................. 19 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................GTATCCCAGCGGATTGTAT....... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CTTCTTTTTCTTTTTTAGTT................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................ATCATAAGTATCCCAGCGGATTGT......... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................ATCCCAGCGGACTGTATAAT.... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CAAATCCATACACCTGAACATAGAAATA.................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................................AATGCATATGCACCCATT................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
....................................................................................................................................................................................................................................................TTCTCTAGCCTACTTTTTAAATACGT........................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................GAACACACTGTTAATCCCGA......................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................TATCATAAGTATCCCAGCGGATT........... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................TTATCATAAGTATCCCAGCGGATTGTA........ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................ATCATAAGTATCCCAGCGGATTGTATA...... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................GTCAAGGGCATTGCGAGGC................................................................................................................................................................................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................GTCCTTGGGCAGCCGGGGAA................................................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................CTTATTGAGACGTATGCAAATGTATAGGCA.......................................................................................................................... 30 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................AGTAAGCGCGGGAACACACTGTTAATCC............................................................................................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.............GGTCCCACGTCCTTGGGCAGCCGG.................................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................CAGCGGATTGTATAATACA. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................TGAACATAGAAATATGCGAATGGTCGC....................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................GTTGTACAAAGCTTACTT................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................GAACACACTGTTAATCCCGACT....................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TGGGTGCACCACACCCATTGAGGCGTA.......................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................CCCAGCGGATTGTATAATACA. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................CCAAATCCATACACCTGAACATAGAAATA.................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................CCATACACCTGAACATAGAAATAT................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................TCATAAGTATCCCAGCGGATTGTATA...... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................ATTGCGAGGCGGCTTCCCCCCCA.................................................................................................................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................GACCCAAATCCATACACCTGAACATA.......................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................GTACAAAGCTTACTTATCATAAGT........................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................ACATAGAAATATGCGAATGGTCGCTAGC................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GTATCGGAAGTGCGAATGCATA............................................................................................................. 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................................................................................................TTTTTAGTTGTACAAA......................................... 16 0 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................................................................................ACGTTTTGTTGGGTCTTTTT........................................................... 20 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGGTATCGGAATTGCGAATGCA............................................................................................................... 22 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................TTGCGAATGTATATGCGC........................................................................................................ 18 2 7 0.29 2 0 0 0 0 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................ACGTTTTGTTGGGTCTTTT............................................................ 19 2 7 0.29 2 0 0 0 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GTATCGGAATTGCGAATG................................................................................................................. 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................................................................................................................................................................TGTTTCTTTTTCTTTTTGAGTT................................................ 22 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.........................................................................................................................................................................................................................................................................AACGTTTTGTTGGGTCTTTTT........................................................... 21 3 16 0.13 2 0 0 0 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................ACGTTTTGTTGGGTCTTTTTT.......................................................... 21 3 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0
................................................AAGTAAGCGCGGGTA.......................................................................................................................................................................................................................................................................................... 15 1 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0 0 0
AAATTCCTAGCCGGGTA........................................................................................................................................................................................................................................................................................................................................ 17 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................CCCGGCTACTGTCGAAGCC........................................................................................................................................................................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................................................................................................ATGCACCCATCCTCAA.............................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

TTTAAGGTTCGGCCCAGGGTGCAGGAACCCGTCGGCCCCTTTATACGATTCATTCGCGCCCTTGTGTGACAATTAGGGCTGATGACAGCTCCCGTAACGCTCCGCCGAAGGGGGTGTCTGGGTTTAGGTATGTGGACTTGTATCTTTATACGCTTACCAGCGATCGTATGGTGGTGGGGTACCCACGTGGTGTGGGTAACTCCGCATACGTTTACATATCCGTAACGCTTACGTATACGTGGGTAAGAGATCGGATGAAAAATTTATGCAAAACAACGAAGAAAAAGAAAAAATCAACATGTTTCGAATGAATAGTATTCATAGGGTCGCCTAACATATTATGTT
****************************************************************************************************************************************************************************************************(((..(((....((......))....)))...))).............................************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
........................................................................................................................................................................................................................................................GATCGGAGGAAAAATTCAT.............................................................................. 19 2 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................ATAGGGTAGCCTAACAT........ 17 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................GGCGAAAAAAAAAAAATCAACATGT........................................... 25 3 2 0.50 1 0 0 1 0 0 0
........................................................................................................................GGTTTAGCTATGTGGA................................................................................................................................................................................................................. 16 1 2 0.50 1 0 1 0 0 0 0
.................................................................................................................GTGTCTGGGTTTAGGTA....................................................................................................................................................................................................................... 17 0 2 0.50 1 1 0 0 0 0 0
...........................................................................................................AAGCGGGGATCTGGGTTTA........................................................................................................................................................................................................................... 19 3 20 0.40 8 0 0 0 8 0 0
.......TTCTGCCCAGGGTGC................................................................................................................................................................................................................................................................................................................................... 15 1 3 0.33 1 1 0 0 0 0 0
.........................................................................................................CGAAGGGCGTGTCCGGGCT............................................................................................................................................................................................................................. 19 3 14 0.21 3 0 0 0 0 3 0
.......................................................................................................................GGGTTTAGCAATGTGGA................................................................................................................................................................................................................. 17 2 16 0.06 1 0 1 0 0 0 0
.............................................................................................................................AGGTGTGTGGACTTG............................................................................................................................................................................................................. 15 1 18 0.06 1 0 0 1 0 0 0
...............................................................................................................................................................................................................................................AGGGTATGAGATCGGA.......................................................................................... 16 2 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:235348-235692 - dsi_30301 A-AATTCCAAG-----C------------------------CGGGTCCC----------------A------CG--TCCTTGG--GCAGC-CGGGGAA--ATATGCTAAGTAAGCGCGGGAACACACTGTTAAT---------------------------------CCCGACTACTGTCGAGGGCATT-----------------------------------------------G------------CG-------AGGCG--------------------------------GCTTCCCCCA-----------------CAGAC---------CCAAATCCATAC--ACCTGAACATAG--AAA------TATGCGAATGGTC-GC----TAGCATACCACCACCCCATGGGTGCACCACACCCATTGAGGCGTATGCAA---------------------------ATGTATAGGCATTGCGAATGCATATGCACCCATTC-TCTA--GCCTAC--T------TTTTAAATACG-TTTTGTTGCTTCTTTTT-CTTT----------TTTAGTTGTACAAAGCTTACTTATCATAAGTATC---CC--AGCGGATTGTATAATA--CAA----------
droSec2 scaffold_6:373511-373851 - A-AATTCCAAG-----C------------------------CGGGACCT----------------A------CG--TCCTTGG--ACAGC-AGGGGAA--ATATGCTAA----GCGCGGGAACACACTGTTAAT---------------------------------CCCGACTACTGTCGAGGGCATT-----------------------------------------------G------------CG-------AGGCG--------------------------------GCTTCCCCCG-----------------CAGAC---------CCAAATCCATAC--ACCTGAACATAG--AAA------TATGCGAATGGTC-GC----TAGCATACCACCACCCCATGGGTGCACCACACCCATTGAGGCGTATGCAA---------------------------ATGTATAGGCATTGCGAATGCATATGCACCCATTC-TCTA--GCCTAC--T------TTTTAAATACG-TTTTGTTGCTTCTTTTT-CTTT----------TTTAGTTGTACAAAGCTTACTTATCATAAGTATC---CC--AGCGGATTGTATAATA--CAA----------
dm3 chr3R:267964-268299 - A-AATTCCAAG-----C------------------------CGGGACCG----------------A------CG--TCCATGG--GTAGC-TGGGGAA--ATATGCTATGTAAGCGCGTGAAAACATTGTTAAT---------------------------------CCTGA---CTGCCGAGGGCATT-----------------------------------------------G------------CG-------AGGCG--------------------------------GCTTCTCCCA-----------------CAGAC---------CCAAATCCATAC--ACCTGAACATAG--AAA------TATGCGAATGGTC-GC----TAGCATAC------CCAATGGGTGCACCGCACCCATTGAGGCACATGCAA---------------------------ATGTATAGGCATTGCGAATGCATATGCACCCATTC-TCTA--GCCTAC--T------TTTTAAATACG-TTTTGTTGCTTCTTTTT-CTTT----------TTTAGTTGTACAAAGCTTACTTATCATAAGTATC---CC--AGCGGATTGTATAATA--CAA----------
droEre2 scaffold_4770:614121-614445 - A-AATTCCAAG-----C------------------------CAGGACTC----------------A------CG--TTCTTTG--GCAGC-TGGGGAT--ATATGCTAAGTAAGCGCGTAGAAACACTATCAAT---------------------------------CCTGA---CTGTCGAAGGCGTT-----------------------------------------------G------------CA-------AGGCG--------------------------------GCTTCTCCCA-----------------CAGAC---------CCAAATCCATAC--ACCTGAACATAG--AAA------TATGCGCATGGTA-GC----TAGCATAC------CCAATGG-----GCACACCCATTGAGGCATATGCAA---------------------------ATGTATAGGCATTGCGAATGCATATGCACCCCTTC-TCTA--GCCTTC--TT------------TTCG-TTTTGTTGCTTCTTTTT-CTTT----------TTTAGTTGTAAAAAGCTCACTTATCATAAGTATC---CT--AGCGGATTGTATAATA--CAA----------
droYak3 3R:644517-644849 - A-AATTCCAAG-----T------------------------CAGGACTC----------------A------CG--TTCTTGG--GTAGC-TCGGAAA--ATATGCTAAGTAAGCGCGTAAAAACACTATTAGT---------------------------------CCTGA---CTGTCGAAGGCATT-----------------------------------------------G------------CA-------TGGCT--------------------------------GCTTTTCCCG-----------------CAGAC---------CCAAATTCATAC--ACTTGAACATAG--AAA------TATGCGAATGGTG-GC----AAGCATTCC-----CCAATGG-----GTATACCCATTGAGGCATATGCAG---------------------------ATGTATAGGCATTGCGAATGCATATGCACCCGTTC-TCTA--GCCGAC--TT-----TTTTAAATACG-TTTTGTTGCTTCTTTTT-CTT----------CTTTAGTTGTAAAAATCTTATTTATCATAAGTATC---CT--GGCGGATTGTATAATA--CAA----------
droEug1 scf7180000409759:210381-210716 - A--CTTCTACG-----C------------------------AAGAATCC----------------A------CG--TTCAAAA--GCGTT-TGGAA-----AATGCTGAGTAAGCGAAG---------------ATAGCGAAAAGTGAAACATATACAACTACC--A----------------------CGCT-----------------TATTCCGTACTTTTGC----------------------------------GGA--------------------------------CATTCTCCCA-----------------CAGCT---------ACAGCTCCATGC--ACCCGAACATAAAAAAA------TATGCTAAAAGTATGC--------------------------T---CCAGACATACTGAAGCATAAGCAT---------------------------ATGTATAGGCATTGCGATTGCATATGCACCCATTCTTATA--GCGTAC--TA-----TTTCAAATATG-TTTTGTTGCTTCTTTTT-CTTT---AATCTACTTTAGTTGTACAAAGCTTACTTATCATAAGTACC---CC--AGCGGATTGTATAATA---AA----------
droBia1 scf7180000302098:166700-167007 + A-CATTTCGCG-----T------------------------GATGACAC----------------A-CTATACG--TTC--------ATT-TGGGAAA--GCATGCCGAGCAAGCGCAG---------------ATTGTGGAGTTCGAAACCCAAACTACCACTGCA----------------------TGC--------------------------------------------G------------CA-------AAGTA--------------------------------TATTTTCCAA-----------------GAGCC--------------------C--AGCCGAGCATGA--AAA------TACGCTAATGGTATGC----C---------------------T---GCGTGCATATTGAAGCATATGCAA---------------------------ATGTATAGGCATTGCGAATGCATATGCGCCCATTCTTCTA-----------------CTTTGAACATG-ATTTGTTGTTTCTTTTC--TAT----AACTACTTTAGTTGTACAAAGCTTACTTATCATAAGTACC---CC--AGCGGATTGTATAATA--CAA----------
droTak1 scf7180000415291:26620-26971 + A-ATTTCCACG-----C------------------------AAGGACAC----------------A------CC--TTCAGGG--ACTTT-TGGGAAA--AAAGGTTTAGTAAGCCCAT---------------GTAGCGGAGGGCGGAACTTAAACTACCACA--A----------------------TGCG-----------------AAATCGGTACTTTTGCACAGTT---TT------------CA-------AAGTA--------------------------------CATTTTCCCT-----------------CAGCC---------CAAAATGCACAT--ACCTTCGGGTAA--AAA------TATGCTAATAGTATGC----T---------------------C---GCATACCTATTGAGGCATATGCAA---------------------------ATGTATAGGCATTGCGAATGCATATGCACCCATTTTTCTA--GCGTAC--TA-----CTTTAAATATG-TTTTGTTGCTTCTTTTT-CTTT---AAACTACTTTAGTTGTACAAAGCTTACTTACCATAAGTACC---CG--AGCGGATTGTATAAAA--CGA----------
droEle1 scf7180000491104:2026115-2026429 - A-AATTCCACA-----C------------------------AAGAACACACACACACACACACACA------CG--TTCATGGAGGCGGC-GGGGGAAAACTA-------------------------------------------------------------------------TATTGCAGATATT-----------------------------------------------G------------CA-------TTGGT--------------------------------TATACGCCCA-----------------CAGCT---------AAAAATCCATAA--ACCAGAGCATAC--AGA------TATGCTAATAGTATGC----C---------------------T---GCATACATATTGAGGCATATGCAA---------------------------ATGTATAGGCATTGCGAATGCATATGCAACCATTC-TTTA--GCGTAC--TATGATACTTTAAACATG-TTTCGTTGCTTCTTTTT-CTTT---AAACTACTTTAGTTGTACAAAGCTTACTTATCATAAGTACC---CC--AACGGATTGTATAATA--CAA----------
droRho1 scf7180000763184:33650-34001 - A-AATTCCACA-----C------------------------AAGGACAC----------------C------CG--TTCATAG--GCATT-TGGGACA--GAATGCTCAGCAAGCGCGG---------------ATAGCGGAGGGCGACACCCAAATTACCAGG--A----------------------CCCG-----------------CAGTCCGTGCTTTTGCCGATAT---TG------------CA-------AATAA--------------------------------TATGCTCCCA-----------------CAGCC---------GCAAATCCATAC--ACCCGAACATTA--AAA------TATGCTAATAGTATGC----T---------------------T---GCATACATATTGTGGCATATGCAA---------------------------ATGTATAGGCATTGCGAATGCATATGCACCCATTCTTCTA--GAGTAC--TA-----TTTTAAATATG-TTTTGTTGCTTCTTTTT-CTTT---AAACTACTTTAGTTGTACAAAGCTTACTTATCATAAGTACC---CC--AGCGGATTGTATAATA--CAA----------
droFic1 scf7180000454096:1403077-1403333 - AGAATTCCAGG-----C------------------------AA-GACAC----------------T------CG--TGCATGG--GCATT-TGGGGAG---TAT--------------------------------------------------------------------------------------------------------------CCGTACT----------------------------------------AG--------------------------------GGT--------------------------T----------------ACCATACCATCCCGAACATGG---AA------TATGCAAATAGTATGC----T---------------------C---GCATACATATTGAGGCATATGCAA---------------------------ATGTATAGGCATTGCGAAT------GCGCCCATTC-TCTA--GCGTAC--TC-----CTTCAAATTTG-TTTTGTTGCTTCTTTTT-CTTT---AAACTACTTTAGTTGTACAAAGCTTACTTATCATAAGTACC---CC--TGCGGATTGTATAATA--CAA----------
droKik1 scf7180000302475:421219-421520 + A-AATTCCATG-----C------------------------AAGGACAC----------------A------CGCGTCAGAGG--GCAG-----GA-----------------------------------------------------------------------CTTGG---CTGCCGAA---AT--CCG---------------------------------------------------------A-------AAGAG--------------------------------GCC-AGCCCA-----------------CTGAC----------CGAATCCATTC--ACGCGGACATAC--AGATATACATATGCTAATAGTATGCTCACC---------------------T---GCATACCTATTGCCGCATATGCAA---------------------------ATGTATAGGCATTGCGAATGCACATGCGCCCATTCATCGCTTACGTAC--TA---TATAATAAATATG-TTTTGTTGCTTCTTTTT-CTTT---AAACTACTTTAGTTGTACAAAGCTTACCTATTCTAAGTGCC---CC-GAGCGGATTGTATAAACAGAAA----------
droAna3 scaffold_13340:15705319-15705721 + A-TACTCGACA-----C------------------------AAGGACAT----------------AAGGA--TG--CGGGCGA--GCAGCCTGGGAAT-AGGATACTGAGTAGGCGTAG---------------AGCTGAGAGCTCGAAGC------------TCCA----------------------AGCAGAGAGCTTCTCGTTCGAAA------------GG---CAT---TACAACTCCCACTC-----TACAACGTC--------CACACATCCACATCCACATCCAGAACCACCCCCACTT-------CCACCCACAATC---------CAAAATTCATTT--ACGCGGACATAA--AAA------TATGCCAATCGTAAGCAGACC---------------------T---GCATACGCATTGAAGCATATCCAA---------------------------ATGTATAGGCATTGCGAAGGCATATGCGCCCATTCGTCTA--ACACAC--TA---TATATTAAATATG-TTTTGTTGCTTCTTTTT-CTTT----AATTACTTTAGTTGTACAAAACTTACCTATTCTAAGTACC---CG-AAGCGGATTGTAAAA-A--CGT----------
droBip1 scf7180000396708:4332096-4332487 - -----TCCACA-----G------------------------AAGGACCC----------------GAGGA--CG--TAGGCGG--GCAGCCTGGGAATTAGAATACTGAGTAGGCGTTG---------------ATTAGAGAGCT------------------------------------------------GAGAGCTCCTCGTTCGAAA------------GG---CAATAATATAACTCCCATTCCG-------ACGCCCACTT----------CCATATCCACTT-----TACACT------TCACACAACCACCCACTATCCACCACCCACAAAATTCATTA--AAGCGGACATAA--AAA------TATGCCAATCGTATGCAGACC---------------------T---GCATACGCATTGAAGCATATCCAA---------------------------ATGTATAGGCATTGCGAATGCATATGCGCCCATTCGTCTA--ACACACACTAT-ATATATTAAATATG-TTTTGTTGCTTCTTTTT-CTTT----AATTACTTTAGTTGTACAAAACTTACCTATTCTAAGTACC---CGAAAGCGGATTGTAAAA------A----------
dp5 2:24506530-24506689 + C-ACATACAAACA-----------------------------------------------TCCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTC-------ATAC---------------------------------------------------------------------------------------------------------------------ATAC----T---------------------T---ACATACA------------TACGA---------------------------GTATA--TATATTACACATACA-------------------------------------------ATA-TTTTGTTGCTTCTTTTC-TTTTAAAAAACTACTTTAGTTGTACAAAGCTTACAAATTAGAAGTACAGTACC-ATGAGAATTGTATAAAATGCGA----------
droPer2 scaffold_3:7287960-7288119 + C-ACATACAAACA-----------------------------------------------TCCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTC-------ATAC---------------------------------------------------------------------------------------------------------------------ATAC----T---------------------T---ACATACA------------TACGA---------------------------GTATA--TATATTACACATACA-------------------------------------------ATA-TTTTGTTGCTTCTTTTC-TTTTAAAAAACTACTTTAGTTGTACAAAGCTTACAAATTAGAAGTACAGTACC-ATGAGAATTGTATAAAATGCGA----------
droWil2 scf2_1100000004943:2941792-2942192 + C-ACCCGCATTCATTGTGGAGAAATGTTAAGTAAATAGCGAAAGAACGGACAAACGCGGGGAAACA------CTTTTCGAAGG--G-----------------------------------ACATATTGTT----------------------------------------------ATTGA-------TAGA-----------------AAATCGAT---------------------------ATTCCAATATAT-------ATATGTATATATATGTATATGTATGTGCATATGTATTTCTG-----------------CAGCT---------GGCGATCGAGAA--GCAA--------------------TTGCTAAACATATTC--------------------GA----T---GCATACATATTAATATATATATACACAAATATTTGTATATATATATAGAGATTGTATAGGCATTGCTA-----AATGCATTCATACTTCTA--ACTAACGAT------TAAAAAATACATTTTTGTTGCTTTTTTTC-TTTTTTTTAACTACTTTAGTTGTACAAAGCTTATAAATTATAAGTACA-TACT--ACAAAACTGTATAAAA--CAAAACAAAAAAA
droVir3 scaffold_13047:9371143-9371301 + T-GC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---GCACACATATTTTTATGTATGTAT---------------------------GCATGTATGTATGTATATAGCGTATGTGCGCATGTTTGTA--GCAT-C--TAT-ATAAATAAAATACATTTTTGTTGCTTTTTTTCTCTTT--TTAACTACTTTAGTTGTACAAAGCTT------------------------------TGTATAGAA--AAA-ACAAAC-AA
droMoj3 scaffold_6540:31277977-31278100 - G-TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGT---------------------------ATGTATATACA--------GCGTATGTGCGCAT--GTATG--ATGCAT-CCAT-ATATATAAAATACATTTTTGTTGCTTTTTTTT-CTCTTTTTAACTACTTTAGTTGTACAAAGCTT------------------------------TGTATAGAA--AAA----------
droGri2 scaffold_14906:3891406-3891474 - A-AAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTTTTGTTGCTTTTTTCT-CTTT--TTAACTATTTTAGTTGTACAAAGCTT------------------------------TGTATAGAAACAAA----------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
A-AATTCCAAG-----C------------------------CGGGTCCC----------------A------CG--TCCTTGG--GCAGC-CGGGGAA--ATATGCTAAGTAAGCGCGGGAACACACTGTTAAT---------------------------------CCCGACTACTGTCGAGGGCATT-----------------------------------------------G------------CG-------AGGCG--------------------------------GCTTCCCCCA-----------------CAGAC---------CCAAATCCATAC--ACCTGAACATAG--AAA------TATGCGAATGGTC-GC----TAGCATACCACCACCCCATGGGTGCACCACACCCATTGAGGCGTATGCAA---------------------------ATGTATAGGCATTGCGAATGCATATGCACCCATTC-TCTA--GCCTAC--T------TTTTAAATACG-TTTTGTTGCTTCTTTTT-CTTT----------TTTAGTTGTACAAAGCTTACTTATCATAAGTATC---CC--AGCGGATTGTATAATA--CAA----------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................GTCGAGGGCATT-----------------------------------------------G------------CG-------AGGC.............................................................................................................................................................................................................................................................................................................................................................................................1912.00201100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATC---CC--AGCGGATTGTAT...................1912.00200020000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTTTTT-CTTT----------TTTAGTT.................................................................2011.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATAAGTATC---CC--AGCGGATTGT.....................2411.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................CAAATCCATAC--ACCTGAACATAG--AAA------TA............................................................................................................................................................................................................................................................................2811.00100000000000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCATATGCACCCATT...........................................................................................................................................1811.00100001000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC-TCTA--GCCTAC--T------TTTTAAATACG-T.......................................................................................................2611.00101000000000000000
.......................................................................................................................GAACACACTGTTAAT---------------------------------CCCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCATAAGTATC---CC--AGCGGATT.......................2311.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATCATAAGTATC---CC--AGCGGATTGTA....................2711.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATAAGTATC---CC--AGCGGATTGTATA..................2711.00100010000000000000
.........................................................................G--TCCTTGG--GCAGC-CGGGGAA--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
............................................................................................................AGTAAGCGCGGGAACACACTGTTAAT---------------------------------CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000010000
...........................................GGTCCC----------------A------CG--TCCTTGG--GCAGC-CGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--AGCGGATTGTATAATA--CA...........1911.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TGAACATAG--AAA------TATGCGAATGGTC-GC----..........................................................................................................................................................................................................................................................2711.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTACAAAGCTTACTT..................................................1811.00101000000000000000
.......................................................................................................................GAACACACTGTTAAT---------------------------------CCCGACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTGCACCACACCCATTGAGGCGTA.............................................................................................................................................................................................................2711.00100000001000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---CC--AGCGGATTGTATAATA--CA...........2111.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................CCAAATCCATAC--ACCTGAACATAG--AAA------TA............................................................................................................................................................................................................................................................................2911.00100000000000001000
......................................................................................................................................................................................................................................................................................................................................................CCATAC--ACCTGAACATAG--AAA------TAT...........................................................................................................................................................................................................................................................................2411.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATAAGTATC---CC--AGCGGATTGTATA..................2611.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................GAC---------CCAAATCCATAC--ACCTGAACATA..........................................................................................................................................................................................................................................................................................2611.00100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAAGCTTACTTATCATAAGT.........................................2411.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................ACATAG--AAA------TATGCGAATGGTC-GC----TAGC......................................................................................................................................................................................................................................................2811.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT----------TTTAGTTGTACAAA..........................................................1620.50100000010000000000
droSec2
A-AATTCCAAG-----C------------------------CGGGACCT----------------A------CG--TCCTTGG--ACAGC-AGGGGAA--ATATGCTAA----GCGCGGGAACACACTGTTAAT---------------------------------CCCGACTACTGTCGAGGGCATT-----------------------------------------------G------------CG-------AGGCG--------------------------------GCTTCCCCCG-----------------CAGAC---------CCAAATCCATAC--ACCTGAACATAG--AAA------TATGCGAATGGTC-GC----TAGCATACCACCACCCCATGGGTGCACCACACCCATTGAGGCGTATGCAA---------------------------ATGTATAGGCATTGCGAATGCATATGCACCCATTC-TCTA--GCCTAC--T------TTTTAAATACG-TTTTGTTGCTTCTTTTT-CTTT----------TTTAGTTGTACAAAGCTTACTTATCATAAGTATC---CC--AGCGGATTGTATAATA--CAA----------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................CTACTGTCGAGGGCATT-----------------------------------------------G------------CG-------AGGC.............................................................................................................................................................................................................................................................................................................................................................................................2413.0031110
.............................................................................CCTTGG--ACAGC-AGGGGAA--ATATGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
........................................................................................................................................................................................................................................................................................................................................................ATAC--ACCTGAACATAG--AAA------T.............................................................................................................................................................................................................................................................................2011.0010010
....................................................................................................ATATGCTAA----GCGCGGGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATAAGTATC---CC--AGCGGATTGT.....................2411.0010010
................................................T----------------A------CG--TCCTTGG--ACAGC-AGGGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
................................................................................................................................................................................TGTCGAGGGCATT-----------------------------------------------G------------CG-------AGGC.............................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..........................................................................................................................................................................................ATT-----------------------------------------------G------------CG-------AGGCG--------------------------------GCTTCCCCCG-----------------.................................................................................................................................................................................................................................................................................................................................2111.0011000
..........................................................................................................TAA----GCGCGGGAACACACTGTTAAT---------------------------------CCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
...ATTCCAAG-----C------------------------CGGGACCT----------------A------CG--TC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.....................................................................................................TATGCTAA----GCGCGGGAACACACTGTTAAT---------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100
..........................................................................................................................................................................................ATT-----------------------------------------------G------------CG-------AGGCG--------------------------------GCTTCCCCCG-----------------C................................................................................................................................................................................................................................................................................................................................2211.0010010
...............................................................................................................................................................................................................................................................................................................................................................CCTGAACATAG--AAA------TATGCGAAT.....................................................................................................................................................................................................................................................................2311.0010010
...............................................CT----------------A------CG--TCCTTGG--ACAGC-AGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTT-CTTT----------TTTAGTTGTACAAAGCT.......................................................2711.0010010
............................................................................TCCTTGG--ACAGC-AGGGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
............................................................................................................................................................................CTACTGTCGAGGGCATT-----------------------------------------------G------------CG-------AGG..............................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATACG-TTTTGTTGCTT.............................................................................................1911.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCATAAGTATC---CC--AGCGG..........................2011.0010100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCATAAGTATC---CC--AGCGGATTGT.....................2511.0010010
.........................................................................................................................................................................................................................................................................................................................................................TAC--ACCTGAACATAG--AAA------TATGCGAAT.....................................................................................................................................................................................................................................................................2711.0010001
......................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCATTGAGGCGTATG...........................................................................................................................................................................................................1811.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATAAGTATC---CC--AGCGGAT........................2111.0011000
...............................................CT----------------A------CG--TCCTTGG--ACAGC-AGGGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTATC---CC--AGCGGATTGTATAATA--CA...........2811.0011000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGCACCACACCCATTGAGGCGT..............................................................................................................................................................................................................2211.0010010
.........................................................................................................................ACACACTGTTAAT---------------------------------CCCGACTACTGTCGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100
............................................................................................................................................................................CTACTGTCGAGGGCATT-----------------------------------------------G------------CG-------AGGCG--------------------------------............................................................................................................................................................................................................................................................................................................................................................2511.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCATTGAGGCGTATGCA.........................................................................................................................................................................................................2011.0010100
..........................................................................................................................................................................GACTACTGTCGAGGGCATT-----------------------------------------------G------------CG-------AGG..............................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
dm3
A-AATTCCAAG-----C------------------------CGGGACCG----------------A------CG--TCCATGG--GTAGC-TGGGGAA--ATATGCTATGTAAGCGCGTGAAAACATTGTTAAT---------------------------------CCTGA---CTGCCGAGGGCATT-----------------------------------------------G------------CG-------AGGCG--------------------------------GCTTCTCCCA-----------------CAGAC---------CCAAATCCATAC--ACCTGAACATAG--AAA------TATGCGAATGGTC-GC----TAGCATAC------CCAATGGGTGCACCGCACCCATTGAGGCACATGCAA---------------------------ATGTATAGGCATTGCGAATGCATATGCACCCATTC-TCTA--GCCTAC--T------TTTTAAATACG-TTTTGTTGCTTCTTTTT-CTTT----------TTTAGTTGTACAAAGCTTACTTATCATAAGTATC---CC--AGCGGATTGTATAATA--CAA----------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....TCCAAG-----C------------------------CGGGACCG----------------A------CG--TCCATGG--G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2618.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000600010
............................................................................................................................................................................................T-----------------------------------------------G------------CG-------AGGCG--------------------------------GCTTCTCCCA-----------------CA...............................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100300000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................GC-TGGGGAA--ATATGCTAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....TTCCAAG-----C------------------------CGGGACCG----------------A------CG--TCCATGG--G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000300000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------------------------ATGTATAGGCATTGCGAA...........................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TCCATGG--GTAGC-TGGGGAA--ATATGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000100000
.......................................................................................................................................................................................................................................................................................................GCTTCTCCCA-----------------CAGAC---------CCA................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTCCAAG-----C------------------------CGGGACCG----------------A------CG--TCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.........................................................................G--TCCATGG--GTAGC-TGGGGAA--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------ATGTATAGGCATTGCGA............................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TGTAAGCGCGTGAAAACATTGTTAAT---------------------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTATC---CC--AGCGGATTGTATAATA--.............2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................C-GC----TAGCATAC------CCAATGG.....................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................G--TCCATGG--GTAGC-TGGGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000
..........................................................................................................TATGTAAGCGCGTGAAAACATTGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................GGGACCG----------------A------CG--TCCATGG--GTAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................AAT---------------------------------CCTGA---CTGCCGAGGGCATT-----------------------------------------------G------------C.........................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................T---------------------------------CCTGA---CTGCCGAGGGCATT-----------------------------------------------G------------CG-------AGG..............................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATCATAAGTATC---CC--AGCGGATTGTA....................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTACTTATCATAAGTATC---CC--AGCGGA.........................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................GC-TGGGGAA--ATATGCTATGTAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................CATGG--GTAGC-TGGGGAA--ATATGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.....................................................................................................................................................................................................................................................................................................................................................TCCATAC--ACCTGAACATAG--AAA------TATGCGAA......................................................................................................................................................................................................................................................................3012.0020000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................CG--TCCATGG--GTAGC-TGGGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................C-GC----TAGCATAC------CCAATGGGTGCACCG.............................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TAAGCGCGTGAAAACATTGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................................CG----------------A------CG--TCCATGG--GTAGC-TGGGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CCG----------------A------CG--TCCATGG--GTAGC-TGGGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCACCCATTC-TCTA--GCCTAC--T------TT..................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AATTCCAAG-----C------------------------CGGGACCG----------------A------CG--.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-CTTT----------TTTAGTTGTACAAAGCTTAC....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................AC---------CCAAATCCATAC--ACCTGAAC.............................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ACCG----------------A------CG--TCCATGG--GTAGC-TGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------------ATGTATAGGCATTGCGAATGCATAT....................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........G-----C------------------------CGGGACCG----------------A------CG--TCCATGG--GTAGC-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................T-----------------------------------------------G------------CG-------AGGCG--------------------------------GCTTCTCCCA-----------------CC...............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GAATGGTC-GC----TAGCATAC------CCAATG......................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATACG-TTTTGTTGCTTCTTTTT-C.....................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................C---------CCAAATCCATAC--ACCTGAACATAG--AAA------..............................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TCCATGG--GTAGC-TGGGGAA--ATATGCTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC--T------TTTTAAATACG-TTTTGTTGCTTCT...........................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................CCGAGGGCATT-----------------------------------------------G------------CG-------AGGC.............................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACCCATTGAGGCACATGCA.........................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TGTTAAT---------------------------------CCTGA---CTGCCGAGGGCAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................G--TCCATGG--GTAGC-TGGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................AAT---------------------------------CCTGA---CTGCCGAGGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................GTC-GC----TAGCATAC------CCAATGGGT...................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTCCAAG-----C------------------------CGGGACCG----------------A------CG--TC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
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................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTTCTTTTT-CTTT----------TTTAGTTGTACA............................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGCACATGCAA---------------------------ATGTATAGGCATTGC..............................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................................................................................................AT---------------------------------CCTGA---CTGCCGAGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..........................................................................................................................................................................GA---CTGCCGAGGGCATT-----------------------------------------------G------------CG-------AGGCG--------------------------------GC..........................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................AATCCATAC--ACCTGAACATAG--AA.....................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--GCCTAC--T------TTTTAAATACG-TTTTGTTGCT..............................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCGCACCCATTGAGGCA...............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................................................................................................................................................................................................................................................................................................TCCCA-----------------CAGAC---------CCAAATCCAT.........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................CCTGA---CTGCCGAGGGCATT-----------------------------------------------G------------CG-------AGGCG--------------------------------G...........................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GACCG----------------A------CG--TCCATGG--GTAGC-TGGGGAA--A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.............................................................................................................GTAAGCGCGTGAAAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACATGCAA---------------------------ATGTATAGGCA..................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TTGTTAAT---------------------------------CCTGA---CTGCCGAGGGCATT-----------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATAGGCATTGCGAATGCATA.....................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACG-TTTTGTTGCTTCTTTTT-CTT...................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................CTGCCGAGGGCATT-----------------------------------------------G------------CG-------AGGCG--------------------------------GCTT........................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................G--TCCATGG--GTAGC-TGGGGAA--ATATGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGCACCGCACCCATTGAGGCACATGCAA---------------------------A............................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAAGTATC---CC--AGCGGAT........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGCAA---------------------------ATGTATAGGCATT................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAA---------------------------ATGTATAGGCATTGCGAATGCAT......................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................C----TAGCATAC------CCAATGGGT...................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------------ATGTATAGGCATTGCGAAT..........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................AACATTGTTAAT---------------------------------CCTGA---CTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
droEre2
A-AATTCCAAG-----C------------------------CAGGACTC----------------A------CG--TTCTTTG--GCAGC-TGGGGAT--ATATGCTAAGTAAGCGCGTAGAAACACTATCAAT---------------------------------CCTGA---CTGTCGAAGGCGTT-----------------------------------------------G------------CA-------AGGCG--------------------------------GCTTCTCCCA-----------------CAGAC---------CCAAATCCATAC--ACCTGAACATAG--AAA------TATGCGCATGGTA-GC----TAGCATAC------CCAATGG-----GCACACCCATTGAGGCATATGCAA---------------------------ATGTATAGGCATTGCGAATGCATATGCACCCCTTC-TCTA--GCCTTC--TT------------TTCG-TTTTGTTGCTTCTTTTT-CTTT----------TTTAGTTGTAAAAAGCTCACTTATCATAAGTATC---CT--AGCGGATTGTATAATA--CAA----------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................TATGCTAAGTAAGCGCGTAGAAACACTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2816.0060000006
...............................................................................................GAT--ATATGCTAAGTAAGCGCGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000200
..............................................................................................................................................................................................................................................................................................................................................................ACCTGAACATAG--AAA------TATGCGCAT.....................................................................................................................................................................................................................................................................2411.0010000010
.................................................................................................................................................................................GTCGAAGGCGTT-----------------------------------------------G------------CA-------AGGCG--------------------------------G...........................................................................................................................................................................................................................................................................................................................................................2111.0010000100
........................................................................................GC-TGGGGAT--ATATGCTAAGTAAGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT----------TTTAGTTGTAAAAAGCTCACT...................................................2311.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................A-GC----TAGCATAC------CCAATGG-----GCACACCC........................................................................................................................................................................................................................2611.0011000000
......................................................................................................................................................................................................................................................................................................................................................................ATAG--AAA------TATGCGCATGGT..................................................................................................................................................................................................................................................................1911.0010100000
.....................................................................................................................GTAGAAACACTATCAAT---------------------------------CCTGA---CT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
...................................................................................................................................................................................CGAAGGCGTT-----------------------------------------------G------------CA-------AGGCG--------------------------------G...........................................................................................................................................................................................................................................................................................................................................................1911.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................GCGCATGGTA-GC----TAGCATAC------CCAAT.......................................................................................................................................................................................................................................2511.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCTTCTTTTT-CTTT----------TTTAGTT.................................................................2411.0010000010
.....................................................................................................................................................................................AAGGCGTT-----------------------------------------------G------------CA-------AGGCG--------------------------------GCTTCTCCCA-----------------.................................................................................................................................................................................................................................................................................................................................2611.0011000000
.................................................................................................................................................................................GTCGAAGGCGTT-----------------------------------------------G------------CA-------AGG..............................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................G-----GCACACCCATTGAGGCATATG...........................................................................................................................................................................................................2211.0010001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC-TCTA--GCCTTC--TT------------TTCG-TT......................................................................................................2111.0010000010
............................................................................................................AGTAAGCGCGTAGAAACAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
.................................................................A------CG--TTCTTTG--GCAGC-TGGGGAT--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCACCCCTTC-TCTA--GC.................................................................................................................................1911.0010100000
.................................................................................................................................................................................GTCGAAGGCGTT-----------------------------------------------G------------CA-------AGGC.............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.........................................CAGGACTC----------------A------CG--TTCTTTG--GCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
............................................................................................................................CACTATCAAT---------------------------------CCTGA---CTGTCGAAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................ATGGTA-GC----TAGCATAC------CCAAT.......................................................................................................................................................................................................................................2111.0010010000
......................................................................................................................................................................................................................................................................................................................................................................ATAG--AAA------TATGCGCATGGTA-GC----T.........................................................................................................................................................................................................................................................2311.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAAGCTCACTTATCATA............................................2011.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATAAGTATC---CT--AGCGGAT........................2111.0010100000
..................................................................................................................................CAAT---------------------------------CCTGA---CTGTCGAAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
droYak3
A-AATTCCAAG-----T------------------------CAGGACTC----------------A------CG--TTCTTGG--GTAGC-TCGGAAA--ATATGCTAAGTAAGCGCGTAAAAACACTATTAGT---------------------------------CCTGA---CTGTCGAAGGCATT-----------------------------------------------G------------CA-------TGGCT--------------------------------GCTTTTCCCG-----------------CAGAC---------CCAAATTCATAC--ACTTGAACATAG--AAA------TATGCGAATGGTG-GC----AAGCATTCC-----CCAATGG-----GTATACCCATTGAGGCATATGCAG---------------------------ATGTATAGGCATTGCGAATGCATATGCACCCGTTC-TCTA--GCCGAC--TT-----TTTTAAATACG-TTTTGTTGCTTCTTTTT-CTT----------CTTTAGTTGTAAAAATCTTATTTATCATAAGTATC---CT--GGCGGATTGTATAATA--CAA----------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGAATGCATATGCACCC..............................................................................................................................................2113.00301200000000
.........................................................................................C-TCGGAAA--ATATGCTAAGTAAGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00220000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCATTGCGAATGCATATGCACCC..............................................................................................................................................2611.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATCATAAGTATC---CT--GGCGGATTG......................2511.00100000010000
..........................................................................................................................AACACTATTAGT---------------------------------CCTGA---CT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGGCATATGCAG---------------------------ATGTATAGGC...................................................................................................................................................................2511.00100010000000
............................................................................................................................................................................................................................................................................................................................................................................................ATGGTG-GC----AAGCATTCC-----CCAATGG-----................................................................................................................................................................................................................................2411.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATC---CT--GGCGGATTGTATAATA--CA...........2411.00101000000000
........................................................................CG--TTCTTGG--GTAGC-TCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCCGTTC-TCTA--GCCGAC--TT-----....................................................................................................................2211.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTGCTTCTTTTT-CTT----------CTTT.....................................................................2311.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGAATGCATATGCACCC..............................................................................................................................................1911.00100100000000
................................................C----------------A------CG--TTCTTGG--GTAGC-TCGGAAA--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGAATGCATATGCACCCGTT...........................................................................................................................................2311.00100000010000
................................................C----------------A------CG--TTCTTGG--GTAGC-TCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCATAAGTATC---CT--GGC............................1811.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATTGCGAATGCATATGCACCCGTT...........................................................................................................................................2711.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCCGTTC-TCTA--GCCGAC--T..........................................................................................................................2111.00101000000000
...ATTCCAAG-----T------------------------CAGGACTC----------------A------CG--TTCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------ATGTATAGGCATTGCGAATGC........................................................................................................................................................2311.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-TCTA--GCCGAC--TT-----TTTTAAATACG-T.......................................................................................................2511.00100000010000
.........................................................................G--TTCTTGG--GTAGC-TCGGAAA--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................TGCGAATGGTG-GC----AAGCAT....................................................................................................................................................................................................................................................1911.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCATAAGTATC---CT--GGCGGATTGT.....................2511.00100000010000
..............................................................................................................................CTATTAGT---------------------------------CCTGA---CTGTCGAAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TTTTGTTGCTTCTTTTT-CTT----------CTTTAGT..................................................................2811.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................GGTG-GC----AAGCATTCC-----CCAATGG-----................................................................................................................................................................................................................................2211.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGAGGCATATGCAG---------------------------ATGT.........................................................................................................................................................................2111.00100000010000
...................................................................................................................GCGTAAAAACACTATTAGT---------------------------------CCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
............................................GACTC----------------A------CG--TTCTTGG--GTAGC-TCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
................................................................................................................................................................................TGTCGAAGGCATT-----------------------------------------------G------------CA-------TGGCT--------------------------------............................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.................................................................................GG--GTAGC-TCGGAAA--ATATGCTAAGTAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
....................................................................................................................................GT---------------------------------CCTGA---CTGTCGAAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
.............................................ACTC----------------A------CG--TTCTTGG--GTAGC-T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000
droEug1
A--CTTCTACG-----C------------------------AAGAATCC----------------A------CG--TTCAAAA--GCGTT-TGGAA-----AATGCTGAGTAAGCGAAG---------------ATAGCGAAAAGTGAAACATATACAACTACC--A----------------------CGCT-----------------TATTCCGTACTTTTGC----------------------------------GGA--------------------------------CATTCTCCCA-----------------CAGCT---------ACAGCTCCATGC--ACCCGAACATAAAAAAA------TATGCTAAAAGTATGC--------------------------T---CCAGACATACTGAAGCATAAGCAT---------------------------ATGTATAGGCATTGCGATTGCATATGCACCCATTCTTATA--GCGTAC--TA-----TTTCAAATATG-TTTTGTTGCTTCTTTTT-CTTT---AATCTACTTTAGTTGTACAAAGCTTACTTATCATAAGTACC---CC--AGCGGATTGTATAATA---AA----------SizeHit CountTotal NormTotal
No Reads
droBia1
A-CATTTCGCG-----T------------------------GATGACAC----------------A-CTATACG--TTC--------ATT-TGGGAAA--GCATGCCGAGCAAGCGCAG---------------ATTGTGGAGTTCGAAACCCAAACTACCACTGCA----------------------TGC--------------------------------------------G------------CA-------AAGTA--------------------------------TATTTTCCAA-----------------GAGCC--------------------C--AGCCGAGCATGA--AAA------TACGCTAATGGTATGC----C---------------------T---GCGTGCATATTGAAGCATATGCAA---------------------------ATGTATAGGCATTGCGAATGCATATGCGCCCATTCTTCTA-----------------CTTTGAACATG-ATTTGTTGTTTCTTTTC--TAT----AACTACTTTAGTTGTACAAAGCTTACTTATCATAAGTACC---CC--AGCGGATTGTATAATA--CAA----------SizeHit CountTotal NormTotal
No Reads
droTak1
A-ATTTCCACG-----C------------------------AAGGACAC----------------A------CC--TTCAGGG--ACTTT-TGGGAAA--AAAGGTTTAGTAAGCCCAT---------------GTAGCGGAGGGCGGAACTTAAACTACCACA--A----------------------TGCG-----------------AAATCGGTACTTTTGCACAGTT---TT------------CA-------AAGTA--------------------------------CATTTTCCCT-----------------CAGCC---------CAAAATGCACAT--ACCTTCGGGTAA--AAA------TATGCTAATAGTATGC----T---------------------C---GCATACCTATTGAGGCATATGCAA---------------------------ATGTATAGGCATTGCGAATGCATATGCACCCATTTTTCTA--GCGTAC--TA-----CTTTAAATATG-TTTTGTTGCTTCTTTTT-CTTT---AAACTACTTTAGTTGTACAAAGCTTACTTACCATAAGTACC---CG--AGCGGATTGTATAAAA--CGA----------SizeHit CountTotal NormTotal
No Reads
droEle1
A-AATTCCACA-----C------------------------AAGAACACACACACACACACACACA------CG--TTCATGGAGGCGGC-GGGGGAAAACTA-------------------------------------------------------------------------TATTGCAGATATT-----------------------------------------------G------------CA-------TTGGT--------------------------------TATACGCCCA-----------------CAGCT---------AAAAATCCATAA--ACCAGAGCATAC--AGA------TATGCTAATAGTATGC----C---------------------T---GCATACATATTGAGGCATATGCAA---------------------------ATGTATAGGCATTGCGAATGCATATGCAACCATTC-TTTA--GCGTAC--TATGATACTTTAAACATG-TTTCGTTGCTTCTTTTT-CTTT---AAACTACTTTAGTTGTACAAAGCTTACTTATCATAAGTACC---CC--AACGGATTGTATAATA--CAA----------SizeHit CountTotal NormTotal
No Reads
droRho1
A-AATTCCACA-----C------------------------AAGGACAC----------------C------CG--TTCATAG--GCATT-TGGGACA--GAATGCTCAGCAAGCGCGG---------------ATAGCGGAGGGCGACACCCAAATTACCAGG--A----------------------CCCG-----------------CAGTCCGTGCTTTTGCCGATAT---TG------------CA-------AATAA--------------------------------TATGCTCCCA-----------------CAGCC---------GCAAATCCATAC--ACCCGAACATTA--AAA------TATGCTAATAGTATGC----T---------------------T---GCATACATATTGTGGCATATGCAA---------------------------ATGTATAGGCATTGCGAATGCATATGCACCCATTCTTCTA--GAGTAC--TA-----TTTTAAATATG-TTTTGTTGCTTCTTTTT-CTTT---AAACTACTTTAGTTGTACAAAGCTTACTTATCATAAGTACC---CC--AGCGGATTGTATAATA--CAA----------SizeHit CountTotal NormTotal
No Reads
droFic1
AGAATTCCAGG-----C------------------------AA-GACAC----------------T------CG--TGCATGG--GCATT-TGGGGAG---TAT--------------------------------------------------------------------------------------------------------------CCGTACT----------------------------------------AG--------------------------------GGT--------------------------T----------------ACCATACCATCCCGAACATGG---AA------TATGCAAATAGTATGC----T---------------------C---GCATACATATTGAGGCATATGCAA---------------------------ATGTATAGGCATTGCGAAT------GCGCCCATTC-TCTA--GCGTAC--TC-----CTTCAAATTTG-TTTTGTTGCTTCTTTTT-CTTT---AAACTACTTTAGTTGTACAAAGCTTACTTATCATAAGTACC---CC--TGCGGATTGTATAATA--CAA----------SizeHit CountTotal NormTotal
No Reads
droKik1
A-AATTCCATG-----C------------------------AAGGACAC----------------A------CGCGTCAGAGG--GCAG-----GA-----------------------------------------------------------------------CTTGG---CTGCCGAA---AT--CCG---------------------------------------------------------A-------AAGAG--------------------------------GCC-AGCCCA-----------------CTGAC----------CGAATCCATTC--ACGCGGACATAC--AGATATACATATGCTAATAGTATGCTCACC---------------------T---GCATACCTATTGCCGCATATGCAA---------------------------ATGTATAGGCATTGCGAATGCACATGCGCCCATTCATCGCTTACGTAC--TA---TATAATAAATATG-TTTTGTTGCTTCTTTTT-CTTT---AAACTACTTTAGTTGTACAAAGCTTACCTATTCTAAGTGCC---CC-GAGCGGATTGTATAAACAGAAA----------SizeHit CountTotal NormTotal
No Reads
droAna3
A-TACTCGACA-----C------------------------AAGGACAT----------------AAGGA--TG--CGGGCGA--GCAGCCTGGGAAT-AGGATACTGAGTAGGCGTAG---------------AGCTGAGAGCTCGAAGC------------TCCA----------------------AGCAGAGAGCTTCTCGTTCGAAA------------GG---CAT---TACAACTCCCACTC-----TACAACGTC--------CACACATCCACATCCACATCCAGAACCACCCCCACTT-------CCACCCACAATC---------CAAAATTCATTT--ACGCGGACATAA--AAA------TATGCCAATCGTAAGCAGACC---------------------T---GCATACGCATTGAAGCATATCCAA---------------------------ATGTATAGGCATTGCGAAGGCATATGCGCCCATTCGTCTA--ACACAC--TA---TATATTAAATATG-TTTTGTTGCTTCTTTTT-CTTT----AATTACTTTAGTTGTACAAAACTTACCTATTCTAAGTACC---CG-AAGCGGATTGTAAAA-A--CGT----------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................AGCTTCTCGTTCGAAA------------GG---C.............................................................................................................................................................................................................................................................................................................................................................................................................................1917.007070000
................................................................................................AT-AGGATACTGAGTAGGCGTAG---------------AGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.003011010
...............................................................................................AAT-AGGATACTGAGTAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003001020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAA---------------------------ATGTATAGGCATTGCGAAGGC........................................................................................................................................................2713.003110001
.....................................................................................................................................................................................................GCTTCTCGTTCGAAA------------GG---C.............................................................................................................................................................................................................................................................................................................................................................................................................................1813.003110001
......................................................................................................................................................................................................................................AT---TACAACTCCCACTC-----TACAACGTC--------....................................................................................................................................................................................................................................................................................................................................................................................2512.002000020
................................................................................................................................................................................................................................................................................................................................................................................................TAAGCAGACC---------------------T---GCATACGCAT......................................................................................................................................................................................................................2112.002002000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAA---------------------------ATGTATAGGCATTGCGA............................................................................................................................................................2312.002002000
.........................................................................................................................................................................................................................................................................................................................................................................................................C---------------------T---GCATACGCATTGAAGCAT..............................................................................................................................................................................................................2012.002110000
...............................................................................................................................................................................................................CGAAA------------GG---CAT---TACAACTCCCACT...........................................................................................................................................................................................................................................................................................................................................................................................................2312.002110000
.........CA-----C------------------------AAGGACAT----------------AAGGA--TG--C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000002
................................................................................................................................................................................................................................................................................................................................................................................................TAAGCAGACC---------------------T---GCATACGCATTGAAGC................................................................................................................................................................................................................2712.002020000
.....................................................................................................................................................GC------------TCCA----------------------AGCAGAGAGCTTCTCGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAGTACC---CG-AAGCGGATT.......................2012.002000011
................................................................................................................................................................................................AGAGAGCTTCTCGTTCGAAA------------GG---C.............................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000020
...............................................................................................................................................................................................CAGAGAGCTTCTCGTTCGAAA------------GG---C.............................................................................................................................................................................................................................................................................................................................................................................................................................2412.002000020
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGCGCCCATTCGTCTA--ACACAC--T..........................................................................................................................2612.002020000
..............................................................................................................................................................................................GCAGAGAGCTTCTCGTTCGAAA------------GG---C.............................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000020
................................................................................................AT-AGGATACTGAGTAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002010100
..............................................................................................GAAT-AGGATACTGAGTAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002010001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTAAGTACC---CG-AAGCGGATT.......................2312.002010100
......................................................................................................ATACTGAGTAGGCGTAG---------------AGCTGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.............................................ACAT----------------AAGGA--TG--CGGGCGA--GCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.......GACA-----C------------------------AAGGACAT----------------AAGGA--TG--C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
............................................GACAT----------------AAGGA--TG--CGGGCGA--GCAGCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
.................................................................................................................................................................................................................................................................................CACATCCACATCCACATCCAGAACCA........................................................................................................................................................................................................................................................................................................................................................2611.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAAGTACC---CG-AAGCGGATT.......................2211.001010000
................................................................................................AT-AGGATACTGAGTAGGCGTAG---------------A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGGATTGTAAAA-A--CGT----------1911.001000010
...........................................GGACAT----------------AAGGA--TG--CGGGCGA--GCAGCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATAGGCATTGCGAAGG.........................................................................................................................................................1911.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGAAGGCATATGCGCCCATT...........................................................................................................................................2211.001010000
..............................................................................................GAAT-AGGATACTGAGTAGGCGTAG---------------A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.......................................................................................................................................................................................................................................T---TACAACTCCCACTC-----TACAAC...............................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.........................................................................................................................................................................................................................................................................................CATCCACATCCAGAACCACCCC....................................................................................................................................................................................................................................................................................................................................................2211.001010000
...................................................................................................................GTAG---------------AGCTGAGAGCTCGAAGC------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------ATGTATAGGCATTGCGAAGGCAA......................................................................................................................................................2411.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAA---------------------------ATGTATAGGCATTGCGAAG..........................................................................................................................................................2511.001100000
..........................................AGGACAT----------------AAGGA--TG--CGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATTCGTCTA--ACACAC--C..........................................................................................................................2011.001010000
.....................................................................................................................................................................................................................................................................................................................................................................CATAA--AAA------TATGCCAATCGTAAGC..............................................................................................................................................................................................................................................................2411.001000010
................................................T----------------AAGGA--TG--CGGGCGA--GCAGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...........................................................................................................................................................................................................................................TACAACTCCCACTC-----TACAAC...............................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTATTCTAAGTACC---CG-AAGCGGATT.......................2811.001010000
................................................................................................................................................................................................................................................................................................................................................................................................TAAGCAGACC---------------------T---GCATACGCATT.....................................................................................................................................................................................................................2211.001010000
................................................................................................................................................................................................................................................................................................................................................................................................TAAGCAGACC---------------------T---GCATACGCATTGAAGCA...............................................................................................................................................................................................................2811.001100000
.....................................................................................................GATACTGAGTAGGCGTAG---------------AGCTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................GACC---------------------T---GCATACGCATTGAAGCAT..............................................................................................................................................................................................................2311.001001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCATATCCAA---------------------------ATGTATAGGC...................................................................................................................................................................2311.001010000
......................................................................................................ATACTGAGTAGGCGTAG---------------AGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..............................................CAT----------------AAGGA--TG--CGGGCGA--GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...............................................................................................AAT-AGGATACTGAGTAGGCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTATTCTAAGTACC---CG-AAGCGG..........................2511.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATAGGCATTGCGAAGGC........................................................................................................................................................1911.001010000
......CGACA-----C------------------------AAGGACAT----------------AAGGA--TG--CGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
............................................................................................................................................................................................................................................................................................CCACATCCAGAACCACCCCCACTT-------CCAC....................................................................................................................................................................................................................................................................................................................................2811.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATTCGTCTA--ACACAC--TA---T.....................................................................................................................2211.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACC---CG-AAGCGGATTGTAAA..................2111.001100000
...............................................................................................AAT-AGGATACTGAGTAGGCGTAG---------------AGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
A-TACTCGACA-----C------------------------AAGGACAT----------------AAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTACC---CG-AAGCGGATTGTAAAA-................2411.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACC---------------------T---GCATACGCATTGAAG.................................................................................................................................................................................................................2411.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGACC---------------------T---GCATACGCATT.....................................................................................................................................................................................................................2111.001010000
.................................................................................................T-AGGATACTGAGTAGGCGTAG---------------AGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.....................................................................A--TG--CGGGCGA--GCAGCCTGGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................................................................................AT---TACAACTCCCACTC-----TACAACGTC--------C...................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
...................................................................................................AGGATACTGAGTAGGCGTAG---------------AGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
..............................................................................................GAAT-AGGATACTGAGTAGGCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
......CGACA-----C------------------------AAGGACAT----------------AAGGA--TG--CG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
...............................................................................................AAT-AGGATACTGAGTAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
..........................................................................................................................................GAGAGCTCGAAGC------------TCCA----------------------AGCAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
.....TCGACA-----C------------------------AAGGACAT----------------AAGGA--TG--C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
........................................................................................................................................................................................................................................................C-----TACAACGTC--------CACACATCCACATCCAC...................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.............................................................................................................................................AGCTCGAAGC------------TCCA----------------------AGCAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------ATGTATAGGCATTGCGAAGGCAT......................................................................................................................................................2411.001000010
.................................................................................................................................................................................................................AAA------------GG---CAT---TACAACTCCCACT...........................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..............................................................................GGCGA--GCAGCCTGGGAAT-AGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT----AATTACTTTAGTTGTACAAAACTTACC...................................................2911.001010000
...ACTCGACA-----C------------------------AAGGACAT----------------AAGGA--TG--CG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.............................................................................GGGCGA--GCAGCCTGGGAAT-AGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
....................................................................................................GGATACTGAGTAGGCGTAG---------------AGCTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
............................................GACAT----------------AAGGA--TG--CGGGCGA--GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
......................................................................................................................................................................................................................................AT---TACAACTCCCACTC-----TACAAC...............................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...............................................................................................................................................................................................................CGAAA------------GG---CAT---TACAACTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGACC---------------------T---GCATACGCATTGAAG.................................................................................................................................................................................................................2511.001100000
..............................................................................................................................................................................................................................................................................................................................................................................A------TATGCCAATCGTAAGCAGA...........................................................................................................................................................................................................................................................2011.001000010
......................................................................................................ATACTGAGTAGGCGTAG---------------A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATG-TTTTGTTGCTTCTTTTT-CTT...................................................................................2411.001000010
........................................................................................................ACTGAGTAGGCGTAG---------------AGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.......................................................................................................................................................................................................................................T---TACAACTCCCACTC-----TACAACGTC--------CAC.................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..................................................................................................................................................................................................AGAGCTTCTCGTTCGAAA------------GG---CA............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
...............................................AT----------------AAGGA--TG--CGGGCGA--GCAGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
....................................................................GA--TG--CGGGCGA--GCAGCCTGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.................................................................................GA--GCAGCCTGGGAAT-AGGATACTGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
droBip1
-----TCCACA-----G------------------------AAGGACCC----------------GAGGA--CG--TAGGCGG--GCAGCCTGGGAATTAGAATACTGAGTAGGCGTTG---------------ATTAGAGAGCT------------------------------------------------GAGAGCTCCTCGTTCGAAA------------GG---CAATAATATAACTCCCATTCCG-------ACGCCCACTT----------CCATATCCACTT-----TACACT------TCACACAACCACCCACTATCCACCACCCACAAAATTCATTA--AAGCGGACATAA--AAA------TATGCCAATCGTATGCAGACC---------------------T---GCATACGCATTGAAGCATATCCAA---------------------------ATGTATAGGCATTGCGAATGCATATGCGCCCATTCGTCTA--ACACACACTAT-ATATATTAAATATG-TTTTGTTGCTTCTTTTT-CTTT----AATTACTTTAGTTGTACAAAACTTACCTATTCTAAGTACC---CGAAAGCGGATTGTAAAA------A----------SizeHit CountTotal NormTotal
No Reads
dp5
C-ACATACAAACA-----------------------------------------------TCCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTC-------ATAC---------------------------------------------------------------------------------------------------------------------ATAC----T---------------------T---ACATACA------------TACGA---------------------------GTATA--TATATTACACATACA-------------------------------------------ATA-TTTTGTTGCTTCTTTTC-TTTTAAAAAACTACTTTAGTTGTACAAAGCTTACAAATTAGAAGTACAGTACC-ATGAGAATTGTATAAAATGCGA----------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAGTACC-ATGAGAATTGT.....................2113.0030000300000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAAGTACAGTACC-ATGAG...........................2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAACTACTTTAGTTGTAC.............................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCTTTTC-TTTTAAAAAACTAC........................................................................2411.0010001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAGCTTACAAATTAGA............................................1911.0010010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAATTGTATAAAATGCG...........2011.0010000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGAAGTACAGTACC-ATG.............................2011.0010100000000
................................................................................................................................................................................................................................................................C-------ATAC---------------------------------------------------------------------------------------------------------------------ATAC----T---------------------T---ACATACA------------TACGA---------------------------GT...........................................................................................................................................................................2511.0010010000000
droPer2
C-ACATACAAACA-----------------------------------------------TCCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTC-------ATAC---------------------------------------------------------------------------------------------------------------------ATAC----T---------------------T---ACATACA------------TACGA---------------------------GTATA--TATATTACACATACA-------------------------------------------ATA-TTTTGTTGCTTCTTTTC-TTTTAAAAAACTACTTTAGTTGTACAAAGCTTACAAATTAGAAGTACAGTACC-ATGAGAATTGTATAAAATGCGA----------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAGTACC-ATGAGAATTGT.....................2113.003001002
...................................................................................................................................................................................................................................................................................................................................................................................................AC----T---------------------T---ACATACA------------TACGA---------------------------GT...........................................................................................................................................................................1811.001001000
.................................................................................................................................................................................................................................................................................................................................................................................................ATAC----T---------------------T---ACATACA------------TACGA---------------------------GT...........................................................................................................................................................................2011.001001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGTACC-ATGAGAATTGT.....................2011.001001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAGTACC-ATGAGAAT........................1811.001001000
droWil2
C-ACCCGCATTCATTGTGGAGAAATGTTAAGTAAATAGCGAAAGAACGGACAAACGCGGGGAAACA------CTTTTCGAAGG--G-----------------------------------ACATATTGTT----------------------------------------------ATTGA-------TAGA-----------------AAATCGAT---------------------------ATTCCAATATAT-------ATATGTATATATATGTATATGTATGTGCATATGTATTTCTG-----------------CAGCT---------GGCGATCGAGAA--GCAA--------------------TTGCTAAACATATTC--------------------GA----T---GCATACATATTAATATATATATACACAAATATTTGTATATATATATAGAGATTGTATAGGCATTGCTA-----AATGCATTCATACTTCTA--ACTAACGAT------TAAAAAATACATTTTTGTTGCTTTTTTTC-TTTTTTTTAACTACTTTAGTTGTACAAAGCTTATAAATTATAAGTACA-TACT--ACAAAACTGTATAAAA--CAAAACAAAAAAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGAGATTGTATAGGCAT.................................................................................................................................................................1919.00900360
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAGAGATTGTATAGGC...................................................................................................................................................................1914.00400130
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGAGATTGTATAGGCAT.................................................................................................................................................................2012.00200110
..........................................................................................................................................................................................................................................................................................................ATTTCTG-----------------CAGCT---------GGCGATCGA..........................................................................................................................................................................................................................................................................................................2112.00200020
........................................................................................................................................................................................................................................................................................................GTATTTCTG-----------------CAGCT---------GGCG...............................................................................................................................................................................................................................................................................................................1812.00200020
..............................................................................GAAGG--G-----------------------------------ACATATTGTT----------------------------------------------ATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGAGATTGTATAGGCATTGCTA-----AA.....................................................................................................................................................2611.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGAGATTGTATAGGC...................................................................................................................................................................1811.00100010
........................................................................................................................................................................................................................................................................................................GTATTTCTG-----------------CAGCT---------GGCGAT.............................................................................................................................................................................................................................................................................................................2011.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGAGATTGTATAGGCATTGCTA-----AAT....................................................................................................................................................2711.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................CATATTC--------------------GA----T---GCATACATA.......................................................................................................................................................................................................................1911.00100010
.............................................................................................................................................................................................................................................................................................................TCTG-----------------CAGCT---------GGCGATCGAGA........................................................................................................................................................................................................................................................................................................2011.00100001
...................................TAGCGAAAGAACGGACAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
.......................................GAAAGAACGGACAAACGCGGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAGAGATTGTATAGG....................................................................................................................................................................1811.00100010
.................................AATAGCGAAAGAACGGACAAACGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
................................................................................................................................................................................................................................................................................................................G-----------------CAGCT---------GGCGATCGAGAA--GC...................................................................................................................................................................................................................................................................................................2011.00100100
...................................TAGCGAAAGAACGGACAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..........................................................................................................................................................................................................................................................................................................ATTTCTG-----------------CAGCT---------GGCGATCGAGAA--.....................................................................................................................................................................................................................................................................................................2411.00100010
..............................GTAAATAGCGAAAGAACGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.............................................................................CGAAGG--G-----------------------------------ACATATTGTT----------------------------------------------ATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...................................................AAACGCGGGGAAACA------CTTTTCGAAGG--..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGAGATTGTATAGGCATTGCTA-----AATG...................................................................................................................................................2811.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTA-----AATGCATTCATACTTCTA--ACT................................................................................................................................2611.00101000
..............................................CGGACAAACGCGGGGAAACA------CT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
....................................................................................................................................................................................GA-------TAGA-----------------AAATCGAT---------------------------ATTCCAAT......................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
................................................................................................................................................................................................................................................................................................................................................................AA--------------------TTGCTAAACATATTC--------------------GA----T---................................................................................................................................................................................................................................2011.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAGAGATTGTATAGGCAT.................................................................................................................................................................2111.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAT------TAAAAAATACATTTTTGT..................................................................................................2211.00100010
...........................................................................................................................................................................................................................................................................................................TTTCTG-----------------CAGCT---------GGCGATCGAGAA--G....................................................................................................................................................................................................................................................................................................2411.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATATATAGAGATTGTAT.......................................................................................................................................................................2111.00100010
.......................................GAAAGAACGGACAAACGCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..............................................................................GAAGG--G-----------------------------------ACATATTGTT----------------------------------------------ATTGA-------TAGA-----------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATACTTCTA--ACTAACGAT------T...................................................................................................................2111.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACTACTTTAGTTGTACAAAGCTT......................................................2711.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATATATAGAGATTGTATAGGC...................................................................................................................................................................2511.00100010
..............................................................AACA------CTTTTCGAAGG--G-----------------------------------ACATATTGTT----------------------------------------------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
droVir3
T-GC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---GCACACATATTTTTATGTATGTAT---------------------------GCATGTATGTATGTATATAGCGTATGTGCGCATGTTTGTA--GCAT-C--TAT-ATAAATAAAATACATTTTTGTTGCTTTTTTTCTCTTT--TTAACTACTTTAGTTGTACAAAGCTT------------------------------TGTATAGAA--AAA-ACAAAC-AASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAGCGTATGTGCGCATGTTT........................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTGCGCATGTTTGTA--...................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTACTTTAGTTGTACAAAGCTT------------------------------TGT.....................2811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTATGTATGTAT---------------------------GCATGTATGTAT.................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTCTTT--TTAACTACTTTAGTT.................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACTTTAGTTGTACAAAGC........................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTTTAGTTGTACAAAGCTT------------------------------TGT.....................2511.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACAAAGCTT------------------------------TGTATAGA................2011.001000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTAGTTGTACAAAGCTT------------------------------T.......................2111.001000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTT--TTAACTACTTTAGTTGTACAA...........................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTACTTTAGTTGTACAAAGCTT------------------------------TGT.....................2711.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTACTTTAGTTGTACAAAGCTT------------------------------T.......................2611.001000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTATGTATGTAT---------------------------GCATGT.......................................................................................................................................................................2220.501001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGTATGTAT---------------------------GCATGTATG....................................................................................................................................................................2160.171000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------------------------GCATGTATGTATGTAT.............................................................................................................................................................18200.051000000000000000000000000000000000010000000000000000000000000000
droMoj3
G-TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGT---------------------------ATGTATATACA--------GCGTATGTGCGCAT--GTATG--ATGCAT-CCAT-ATATATAAAATACATTTTTGTTGCTTTTTTTT-CTCTTTTTAACTACTTTAGTTGTACAAAGCTT------------------------------TGTATAGAA--AAA----------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACTACTTTAGTTGTACAAAGC........................................................2511.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATATACA--------GCGTATGTGCGC..............................................................................................................................................2111.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTT-CTCTTTTTAACTACTTTA....................................................................2211.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATATACA--------GCGTATGTGC................................................................................................................................................1911.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAAAATACATTTTTGTTGCT..............................................................................................2511.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATATACA--------GCGTATGTGCGCAT--GT........................................................................................................................................2511.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAATACATTTTTGTTGCTTT............................................................................................2311.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATACA--------GCGTATGTGCG...............................................................................................................................................1911.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTTTTGTTGCTTTT...........................................................................................1911.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTTTTAACTACTTTAGTTGTA..............................................................2411.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGTTGTACAAAGCTT------------------------------TGT.....................2011.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATACA--------GCGTATGTGCGCAT--GTATG--AT.................................................................................................................................2811.001100000
droGri2
A-AAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTTTTGTTGCTTTTTTCT-CTTT--TTAACTATTTTAGTTGTACAAAGCTT------------------------------TGTATAGAAACAAA----------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGCTTTTTTCT-CTTT--T...............................................................................1911.00110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTGTTGCTTTTTTCT-CTTT--................................................................................2311.00110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTAGTTGTACAAAGCTT------------------------------TGT.....................2311.00101
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTATTTTAGTTGTACAAA..........................................................1911.00110

Generated: 05/19/2015 at 03:46 AM