ID:

dsi_30276

 Coordinate:

3r:11576283-11576501 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [3r_11576502_11576823_-]; CDS [3r_11576502_11576823_-]; exon [3r_11576110_11576282_-]; CDS [3r_11576110_11576282_-]; intron [3r_11576283_11576501_-]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCTTAACTATTTGACCGACAACGAGTACACGCCGAACTCTTTGAGAACTGGTAAGTACAAAAATTAATGGTAAATTTATGTAATTAATTTTATTTATGTATATATTACATCTCATATCCTTATAATATACATATATTGCCGCTAAATTTGTATATTACATTCTTTTAAAATATTCTAAACAAATCACGTATAGAATACCATTTTCCATTTGGACGGTTGCAAATGATTTGTATAAAATTTCCTATATACATTTCCCTGACCCGCAACAGGTGCTGAACCCTCTCCGGCCTACTTCAACATTCTGATGTGGGGCAATGAG
**************************************************(((((((((((..(((.((((((...((((((((((....(((..(((((.....)))))...)))......)))).))))))..)))))).))).))))))).))))............(((((((.((.......)).)))))))(((.........)))...(((((....((..((((((..........))))))..))........)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 SRR1275487
Male larvae
...........................................AGAACTGGTACGGACAAG.................................................................................................................................................................................................................................................................. 18 3 20 12.15 243 190 0 46 3 4 0 0 0 0 0
............................................GAACTGGTACGGACAA................................................................................................................................................................................................................................................................... 16 2 20 1.60 32 0 0 0 22 4 0 5 0 0 1
......................................................................................................................................................................................................................................................................................................CAACATTCTGATGTGGGGC...... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................ACACGCCGAACTCTTTGA................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................ACTGGTGCTGAACCCTCTCCGGCC.............................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........TTGACCGACAACGAGTACACGCCGAAC.......................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................CACGCCGAACTCTTTGAGA................................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................CTTCAACATTCTGATGTGGGGC...... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................CTGACCCGCAGCAGGGGCTA............................................ 20 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0
..........................................TAGAACTGGTACGTACAA................................................................................................................................................................................................................................................................... 18 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0
...........................................AGAACTGGTACGGACAA................................................................................................................................................................................................................................................................... 17 2 10 0.40 4 0 0 0 1 3 0 0 0 0 0
...........................................AGAACTGGTACGTACAAG.................................................................................................................................................................................................................................................................. 18 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TCAGGTAGAGAATACCA....................................................................................................................... 17 2 18 0.33 6 0 0 0 0 0 0 0 6 0 0
.........................................TTAGAACTGGTAAGGACA.................................................................................................................................................................................................................................................................... 18 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0
........................................CTCAGAACTGGTACGTACAA................................................................................................................................................................................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 0 1 0
.........................................TCAGAACTGGTACGGACAA................................................................................................................................................................................................................................................................... 19 3 11 0.09 1 0 0 0 1 0 0 0 0 0 0
........................................TTTAGAACTGGTACGGACA.................................................................................................................................................................................................................................................................... 19 3 18 0.06 1 0 0 0 0 0 0 1 0 0 0
........................................CTTAGAACTGGTACGTAC..................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0
........................................CTGAGAACTGGTACGGACA.................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

GGAATTGATAAACTGGCTGTTGCTCATGTGCGGCTTGAGAAACTCTTGACCATTCATGTTTTTAATTACCATTTAAATACATTAATTAAAATAAATACATATATAATGTAGAGTATAGGAATATTATATGTATATAACGGCGATTTAAACATATAATGTAAGAAAATTTTATAAGATTTGTTTAGTGCATATCTTATGGTAAAAGGTAAACCTGCCAACGTTTACTAAACATATTTTAAAGGATATATGTAAAGGGACTGGGCGTTGTCCACGACTTGGGAGAGGCCGGATGAAGTTGTAAGACTACACCCCGTTACTC
**************************************************(((((((((((..(((.((((((...((((((((((....(((..(((((.....)))))...)))......)))).))))))..)))))).))).))))))).))))............(((((((.((.......)).)))))))(((.........)))...(((((....((..((((((..........))))))..))........)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
.................................................................................................................................................................AAAAATTTTAGAAGATTTGTATAGT..................................................................................................................................... 25 3 3 0.33 1 1 0 0 0
..........................................................................................................................................................................................................................................................AAACGGACTGGGTGTTGT................................................... 18 2 8 0.13 1 0 0 1 0
..........................................................................................................................................................................................................................................TTTAAAGGTTATATGTAA................................................................... 18 1 8 0.13 1 0 1 0 0
.........................................................................................................................................................................................................................................................TGAAGGGAATGGGAGTTGT................................................... 19 3 20 0.10 2 0 2 0 0
..................................TTGAGAAAGTCTCGACC............................................................................................................................................................................................................................................................................ 17 2 17 0.06 1 0 1 0 0
.............................................................................................................................................................................AGGTTTGTTTAGTGC................................................................................................................................... 15 1 20 0.05 1 0 0 1 0
.............................................................................................................................................................................................................GGAATCCTGCCAACG................................................................................................... 15 2 20 0.05 1 0 0 0 1
.......................................................ATGTTTTTAAGTGCCATTTT.................................................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:11576233-11576551 - dsi_30276 C------------------------CTTAACTATTTGACCGACAACGAGTACACGCCGAACTCTTTGAGAACTGGTAAGTACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTAATGGTAAATTTATGTAA------------------------------------------------------------------------------------------TTAATTTTATTTATGTATATATTACA----------------------------------------------TCTCATATC----------CT-TATAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAC-ATAT-----ATT--------------------------------------------------GCCGCTAAATTTGTATATTACA----------------------TTCTTT---T--------------------------AAAATATTCTAAACAAATCACGTATAGA-ATACCATT--------------------TTCCATTTGGA-----CGGTTGCAAATGATTTGTATAAAA-TTTCC----------------------T-------------ATATACAT---TT----CCCTGACCCGCAACAGGTGCTGAACCCTCTCCGGCCTACTTCAACATTCTGATGTGGGGCAATGAG
droSec2 scaffold_0:12404877-12405208 - C------------------------CTGAACTATCTGACCGACAACGAGTACACGCCGAACTCTTTGAGAACTGGTAAGTACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTAATGGTAAACTTATGTAA------------------------------------------------------------------------------------------TTAATTTTATATATGTATATATTACA----------------------------------------------TCTCATATC----------CT-TATAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAC-ATAT-----ATT--------------------------------------------------GCCGCTGAATTTGTATATTACA----------------------TTCTTT---T--------------------------AAAATATTTTAAACAAATC-CGTATAGAAATGCCATT--------------------TTCCATTTGGA-----CGGTTGCAAATGATTTGTATACAA-TTTCC----------------------TATTAAACATTTGTATATACAT---TT----CTCTGACCCGCAACAGGTGCTGAACCCTCTCCGGCCTACTTCAACATTCTGATGTGGGGCAATGAG
dm3 chr3R:9602229-9602563 + T------------------------CTTAACTATCTGACCGACAATGAGTACACGCCGAACTCTTTGAGAACTGGTAAGTACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATGAATGGTAAATTTATGTAA------------------------------------------------------------------------------------------TTAAATTTATTTATGTATATATTACA----------------------------------------------TCTAATTTC----------CT-TATAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAC-ATAT-----ATT--------------------------------------------------GCCGCTGAATTTGTATTTTACA----------------------TTCTTTTTTT--------------------------TAAATATTCTAAACAAATC-CGTATAGAAATTCCATT--------------------TTCCATTTGGA-----CGGTTGCAAATGATTTGTATACAA-TTTCC----------------------TATTAAACATTTGTTTATACAT---TT----CTTTGACCCGCAACAGGTGCTGAACCCTCTCCGGCCTACTTCAACATTCTGATGTGGGGCAATGAG
droEre2 scaffold_4770:12030280-12030762 - C------------------------CTTAACTATCTGACTGACAACGAGTACACGCCGAACTCTTTGAGAACCGGTAGGTTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACAAATAGTACATTTTTATTATGTCAATTATTAAATTGAAAACATGTAAAAAGAACAGATTT-TTTATAAAAACTTGACTGTTAAAA-------TCATAAATAT----------------TTTATATTAATTTTACA----------------------------------------------TCTCATTTT----------CT-TAAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGC-ATAT-----CTT--------------------------------------------------GCACCTGAATTCGTATTTTGCTCCACAAATATATAGAGTAATT-TTCTTT---CAAGTTCCAAATTTTGATTTTAGTTCAAAAATATTTTAAACAAATC-CATATACAAATTCCATTATAAATTT---------AGTCTCTATTTGGAATGTACGGTTGCCAATAATTTGTAAACAAATTTCCC-CTACAAAAGGCGAAATAATCTAGTAATGATTTGGATATATAT---TT----TGTTGATCCACAACAGGTGCTGAACCCTCTCCGGCCTACTTCAACATTCTGATGTGGGGCAATGAG
droYak3 3R:13910730-13911231 + dya_1036 C------------------------CTTAACTATCTGACTGACAACGAGTACACGCCGAACTCTTTGAGAACCGGTAGGTAGC-------------------------------------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAGAAATAGTAAATTGATGTAAATGCAATTATTAATTGAAAAACATGTAAAAAGAATAGATTTTTTTATAAAAACTTGACTCTTCAATTTCATTTTCATAAATAGCTAGCTATTA-----ATTTATATTCATTTCAAA----------------------------------------------TCTCATTTTCTTTTGTATCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTGAATTTGTATCCTTC--CTCAAATATGTACAGTAATTTTTCTTT---CAAGTTTTATATTTCGATGGTAGCTCAAAAATATTTTAAGAAAATC-CGTTTAGAATTCCCATTTGCAATTTATTTACAACAGTTTCTATTTGGAATGTGCGGCTGCAAGTTATTTGTAAACAAATTTCCCTCTACAAAAGGAAAAATAAGCTATTAAACATTTGGATCTATAT---TT----GGTTAATCCGCAACAGGTGCTGAACCCTCGCCGGCCTACTTCAACATTCTGATGTGGGGCAATGAG
droEug1 scf7180000409802:366241-366545 - C------------------------CTTAACTATCTGACCGACAACGAGTACACCCCTAATTCTTTGAGAACTGGTGAGTATA-------------------------------------------------------ATTTATAA------------------------------------AGAG--------------------------------------------------------------------------TATAGTA--AAGTCTTTTATTAACCAT--------------------TAATATGAATGATATTCATA-TTTTTGCATATTAAAATGTTTTAATGTTTAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAGT----GTCTCAGACAACAAATG-----------------AAGA---------TTGCTAAAATTAAATTAGGAAAAGTAAAAGATCT-----AAA--------------------------------CA----------------------TTCCCC---T--------------------------AA---------------------------------------------------------------------------------------------------------------------------------A----TATATATATAATTCTC----TGCTCTGCTTCAACAGGTGCCGAGCCGTCTCCGGCCTACTTCAACATTCTGATGTGGGGCAATGAG
droBia1 scf7180000302402:2345955-2346201 + CTGGTCGGGCGGCAAGTCGTCCATTCTCAACTATCTGACCGACAACGAGTACACCCCTAACTCTTTGAGAACTGGTGAGTTTGA-----------------------------AAATGTTTAAAAAGCCACATTTAAAATAGATAAGCCTCAGTCA---------------------TC--------------------------------------------------------------------------------------------------------------------------------------------------GATTTCTAGCTTGATAA-ATGCTTCCT---------------------------------------------AACT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAG------------------A------------------------------------------------------------TTT--------CACCCATAAAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT-----TGTGCTTCCCAACAGGTGCCGAACCCTCTCCGGCCTACTTCAACATCCTGATGTGGGGCAACGAG
droTak1 scf7180000415380:442768-443155 + C------------------------CTCAACTATCTGACCGACAACGAGTACACCCCCAACTCTTTGAGAACTGGTGAGTATA-------------------------------------------------------T-----------CAGTATTTATAATACTTATTTCTTAAATCGAACGAGGACTAACG--TTC-ATTTTTAAAATATTAAA-TAAATTATGGCGTCAAA--AAGGGAAAAAAATAAAAATATTTTTTTGTA--CAGTCCTTTTTTA--CTTTAAAATTATCTTAAAATTCTTA-----------ATGCAGA-TTCTAGCTTGATAAAATGTTTTAA---------------------------------------------AACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGAAAAT--------G------------------TCTAGAAATTCAACATA-----------------------------------------------------------------------------------------------------------TTGATTCAGAAAAAGTGAAAAATATATTA-AAA--------------------------------TT----------------------TTCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTATATATTT---TC----CTTTGCTTTCCAACAGGTGCCGAACCCTCTCCGGCCTACTTCAATATTCTGATGTGGGGCAATGAG
droEle1 scf7180000491047:1581740-1582197 - C------------------------CTTAACTATCTGACCGACAACGAGTACACACCTAACTCTTTGAGAACTGGTACGTATT-------------------------------------------------------TAATATAA----TAGT----ATCATTTTTAAATTAAGAATCA-----------ACCTATTCAATTTTTAAAATATAAAACTAAATAAACGTGTTAAGTCATGGT--------------------ATGTATGAAGCCTTGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAT----------------------------------------------------------------ATTATATATAGTATATTTCAAAAGATCTTTAAGGCTCATACT----------TTTCAAAATTTAATTTATTTACACCTCAAAAATTATTTGTTTTAATTTAAGTTGTCTTTTAAAAATGTTTAAAGATATAAAGAATTTATAATGGTGTTTTGTAAAACAATTTAAACTTAAAATTCAACCTATATTAATTATATAAATATTCTTTATTCCAATAAAATTTACCTTAACT----G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT---TT----CCCCAACCAAAAACAGGTGCTGAACCCTCTCCGGCCTACTTCAACATTCTGATGTGGGGCAACGAG
droRho1 scf7180000780166:61012-61346 + C------------------------CTTAACTATCTGACCGACAACGAGTACACCCCTAACTCTTTGAGAACTGGTAAGCACG-------------------------------------------------------ATTG--------CTGAATTTATTATACTTAAATCAAGAACCG-----------ACCATTCC------CAAA--------------------------------------------------------------------------------------------------------------------------------------ACTTTTG----------------------------------------------------------AAAACTAGAAAATTGA---AAATCCAA--AGGATTTGTAAAATATTTAAAAAAAA---------------------------------------------GTGT----------------TCTATATAAATCTTACACAGATAAATAACCATCAAATATAGTACTTT----------------TCTCA--------------------------------TTACTCCACAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGAAAAACCTATAA-CA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-GTTCC----------------------CATGA------------AACCT---AT----TCCTGATCTCCAACAGGTGCTGAACCCTCTCCTGCCTACTTCAACATCCTGATGTGGGGCAACGAG
droFic1 scf7180000453912:108161-108417 + C------------------------TTGAACTATTTGACCGACAACGAGTACACCCCCAACTCTTTGAGAACTGGTAAGTTAA--------AATATCAATTAGATCATTACAAAATTTAAT------------------------T------------------------------------AGAG--------------------------------------------------------------------------TT---------------------CC-------------------------------------------------------------------TG--TTCTTAAGTGTTTTCTTTTTTGAATAAGTGTAAAGTTTTTTAATCTACAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCTAAAAATCTATTTTGCA----------------------TTCCTC---T--------------------------AA--------------------------------------------------------------------------------------------------------------------------------------------TTCTT---TT----CCCTGTTCCTCGACAGGTGCTGAGCCATCTCCCGCCTATTTCAACATCCTGATGTGGGGCAACGAG
droKik1 scf7180000302706:618829-619033 + C------------------------CTGAACTATCTTACGGACAACGAGTACACCCCCAACTCTCTGCGAACTGGTAAGTATT-------------------------------------------------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTAACTTAGGGTC--------------ATTATA-ATCATAAATAATGACCACATGCATTACC----------------------AAGCTTT----AACA--------------------------------CA----------------------TTCGCT---C--------------------------AA--------------------------------------------------------------------------------------------------------------------------------------------ATTT---CTT----TATTGATTTCCTACAGGTGCCGAACCCTCTCCGGCCTACTTCAACATTCTGATGTGGGGCAATGAG
droAna3 scaffold_13340:17927903-17928090 + C------------------------CTTAACTATTTGACCGATAATGAATACACACCGAATTCGCTCAGGACGGGTAAGTAAA-------------------------------------------------------C--------------------------------------------------------------------------------------------------------------------------------------TTTGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGAAT--------------TCT-------------AAATTCCTAA-----ATTA----------------------CAGCTAA----A---ATTGTAAAAATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCTCATTCAATATGCAACAGGTGCTGAACCCTCTCCGGCCTACTTCAATATCTTGATGTGGGGCAACGAG
droBip1 scf7180000396708:5449750-5449950 - C------------------------CTGAACTATTTAACCGACAATGAGTACACACCGAATTCGCTCAGGACTGGTAAGTGAA-------------------------------------------------------C--------------------------------------------------------------------------------------------------------------------------------------TTTGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGATG--------------TATATATAAGATCAATAATTTCCAAA-----TATG----------------------AAGCTAA----A---AATTCATAAATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCTCATTCGATATGTAACAGGTGCTGAGCCCTCTCCGGCCTACTTCAATATTCTGATGTGGGGCAACGAG
dp5 2:10150694-10150781 + C------------------------AAATGATGTATGTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------ATCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTATCCACAT---T-----------------TTAGGTGCCGAACCCTCTCCGGCCTACTTCAATATCCTGATGTGGGGCAATGAG
droPer2 scaffold_0:10330685-10330740 - C------------------------CTTAACTATTTGACCGACAACGAGTACACCCCCAATTCGCTGAGAACTGGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004943:11056877-11056943 + T------------------------CTTAACTATTTGACTGACAATGAATATACACCCAACTCATTGAGAACCGGTAAGTAAA-------------------------------------------------------CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATAA
droVir3 scaffold_12822:1584323-1584381 + T------------------------CTGAACTATTTGACCGACAACGAATATACGCCCAACTCGCTGAGAACCGGTAAGGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:11529130-11529181 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCGCGGAACCGTCGCCGGCTTACTTCAACATTCTGATGTGGGGCAATGAG
droGri2 scaffold_14624:2625976-2626072 + T------------------------CTCAACTATTTGACTGACAACGAATACACGCCCAACTCGTTGAGAACCGGTAAGTTTGAGAGAAAGAATGCTAATAACAATATGATATAATTGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
C------------------------CTTAACTATTTGACCGACAACGAGTACACGCCGAACTCTTTGAGAACTGGTAAGTACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTAATGGTAAATTTATGTAA------------------------------------------------------------------------------------------TTAATTTTATTTATGTATATATTACA----------------------------------------------TCTCATATC----------CT-TATAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAC-ATAT-----ATT--------------------------------------------------GCCGCTAAATTTGTATATTACA----------------------TTCTTT---T--------------------------AAAATATTCTAAACAAATCACGTATAGA-ATACCATT--------------------TTCCATTTGGA-----CGGTTGCAAATGATTTGTATAAAA-TTTCC----------------------T-------------ATATACAT---TT----CCCTGACCCGCAACAGGTGCTGAACCCTCTCCGGCCTACTTCAACATTCTGATGTGGGGCAATGAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATTCTGATGTGGGGC......1911.00100100000000000000
..................................................ACACGCCGAACTCTTTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
..................................TTGACCGACAACGAGTACACGCCGAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
...................................................CACGCCGAACTCTTTGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAACATTCTGATGTGGGGC......2211.00100100000000000000
droSec2
C------------------------CTGAACTATCTGACCGACAACGAGTACACGCCGAACTCTTTGAGAACTGGTAAGTACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTAATGGTAAACTTATGTAA------------------------------------------------------------------------------------------TTAATTTTATATATGTATATATTACA----------------------------------------------TCTCATATC----------CT-TATAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAC-ATAT-----ATT--------------------------------------------------GCCGCTGAATTTGTATATTACA----------------------TTCTTT---T--------------------------AAAATATTTTAAACAAATC-CGTATAGAAATGCCATT--------------------TTCCATTTGGA-----CGGTTGCAAATGATTTGTATACAA-TTTCC----------------------TATTAAACATTTGTATATACAT---TT----CTCTGACCCGCAACAGGTGCTGAACCCTCTCCGGCCTACTTCAACATTCTGATGTGGGGCAATGAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................TATCTGACCGACAACGAGTACACGCCGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100
..................................................ACACGCCGAACTCTTTGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
dm3
T------------------------CTTAACTATCTGACCGACAATGAGTACACGCCGAACTCTTTGAGAACTGGTAAGTACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATGAATGGTAAATTTATGTAA------------------------------------------------------------------------------------------TTAAATTTATTTATGTATATATTACA----------------------------------------------TCTAATTTC----------CT-TATAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAC-ATAT-----ATT--------------------------------------------------GCCGCTGAATTTGTATTTTACA----------------------TTCTTTTTTT--------------------------TAAATATTCTAAACAAATC-CGTATAGAAATTCCATT--------------------TTCCATTTGGA-----CGGTTGCAAATGATTTGTATACAA-TTTCC----------------------TATTAAACATTTGTTTATACAT---TT----CTTTGACCCGCAACAGGTGCTGAACCCTCTCCGGCCTACTTCAACATTCTGATGTGGGGCAATGAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................GACAATGAGTACACGCCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTCTGATGTGGGGCA.....1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...............................TATCTGACCGACAATGAGTACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................CGCCGAACTCTTTGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAACCCTCTCCGGCCTACTTCA.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTCTGATGTGGGGCAAT...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................ACACGCCGAACTCTTTGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTCTGATGTGGGGCA.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.............................ACTATCTGACCGACAATGAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................GACCGACAATGAGTACACGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAACATTCTGATGTGGG........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATTCTGATGTGGGG.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATTCTGATGTGGGGC......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATTCTGATGTGGGGCA.....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------------------------------GCCGCTGAATTTGTATT.............................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATTCTGATGTGGGGCAATGA.2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TCTGACCGACAATGAGTACACGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................GAGTACACGCCGAACTCTTTGAGAATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGCCTACTTCAACATT..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
T------------------------CTTAACTATCTGACCGACAATGAGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTCTGATGTGGGGCAA....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTCTGATGTGGGGCAAT...2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCCTACTTCAACATTCTGATGTGGGGC......2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTGATGTGGGGCATC...1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................AACTCTTTGAGAACTGGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
C------------------------CTTAACTATCTGACTGACAACGAGTACACGCCGAACTCTTTGAGAACCGGTAGGTTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACAAATAGTACATTTTTATTATGTCAATTATTAAATTGAAAACATGTAAAAAGAACAGATTT-TTTATAAAAACTTGACTGTTAAAA-------TCATAAATAT----------------TTTATATTAATTTTACA----------------------------------------------TCTCATTTT----------CT-TAAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGC-ATAT-----CTT--------------------------------------------------GCACCTGAATTCGTATTTTGCTCCACAAATATATAGAGTAATT-TTCTTT---CAAGTTCCAAATTTTGATTTTAGTTCAAAAATATTTTAAACAAATC-CATATACAAATTCCATTATAAATTT---------AGTCTCTATTTGGAATGTACGGTTGCCAATAATTTGTAAACAAATTTCCC-CTACAAAAGGCGAAATAATCTAGTAATGATTTGGATATATAT---TT----TGTTGATCCACAACAGGTGCTGAACCCTCTCCGGCCTACTTCAACATTCTGATGTGGGGCAATGAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................GACTGACAACGAGTACACGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...............................TATCTGACTGACAACGAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTCTGATGTGGGGCAA....1911.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCTGAACCCTCTCCGG................................1911.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTCTGATGTGGGGCAATG..2111.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATTCTGATGTGGGGC......1911.0010000010
.........................................................GAACTCTTTGAGAACCGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
...................................TGACTGACAACGAGTACACGCCGAACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000
droYak3
C------------------------CTTAACTATCTGACTGACAACGAGTACACGCCGAACTCTTTGAGAACCGGTAGGTAGC-------------------------------------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAGAAATAGTAAATTGATGTAAATGCAATTATTAATTGAAAAACATGTAAAAAGAATAGATTTTTTTATAAAAACTTGACTCTTCAATTTCATTTTCATAAATAGCTAGCTATTA-----ATTTATATTCATTTCAAA----------------------------------------------TCTCATTTTCTTTTGTATCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTGAATTTGTATCCTTC--CTCAAATATGTACAGTAATTTTTCTTT---CAAGTTTTATATTTCGATGGTAGCTCAAAAATATTTTAAGAAAATC-CGTTTAGAATTCCCATTTGCAATTTATTTACAACAGTTTCTATTTGGAATGTGCGGCTGCAAGTTATTTGTAAACAAATTTCCCTCTACAAAAGGAAAAATAAGCTATTAAACATTTGGATCTATAT---TT----GGTTAATCCGCAACAGGTGCTGAACCCTCGCCGGCCTACTTCAACATTCTGATGTGGGGCAATGAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCAACATTCTGATGTGGGGCAATG..2712.00201000010000
.............................ACTATCTGACTGACAACGAGTACACGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
....................................GACTGACAACGAGTACACGCCGAACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.............................ACTATCTGACTGACAACGAGTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
...................................TGACTGACAACGAGTACACGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTCTGATGTGGGGCA.....1911.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTCTGATGTGGGGCAATG..2211.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTCTGATGTGGGGCAATG..2111.00101000000000
..................................CTGACTGACAACGAGTACACGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCTGAACCCTCGCCGGCCTACT..........................2511.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCTGAACCCTCGCCGGCCTA............................2311.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCTGAACCCTCGCCGGCCTACTTCA.......................2811.00101000000000
.................................TCTGACTGACAACGAGTACACGCCGAACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTCTGATGTGGGGCAA....2011.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTCGCCGGCCTACTTCAAC.....................2211.00101000000000
................................ATCTGACTGACAACGAGTACACGCCGAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACATTCTGATGTGGGGCA.....2111.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGATGTGGGGCAATGA.1811.00101000000000
........................................GACAACGAGTACACGCCGAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..........................TTAACTATCTGACTGACAACGAGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGGCCTACTTCAACATTCT................2211.00101000000000
...................................TGACTGACAACGAGTACACGCCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCCTCGCCGGCCTACTTCAAC.....................2411.00101000000000
.....................................................CGCCGAACTCTTTGAGAACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATTCTGATGTGGGGC......1911.00101000000000
..........................................................AACTCTTTGAGAACCGGTGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.17101000000000
droEug1
C------------------------CTTAACTATCTGACCGACAACGAGTACACCCCTAATTCTTTGAGAACTGGTGAGTATA-------------------------------------------------------ATTTATAA------------------------------------AGAG--------------------------------------------------------------------------TATAGTA--AAGTCTTTTATTAACCAT--------------------TAATATGAATGATATTCATA-TTTTTGCATATTAAAATGTTTTAATGTTTAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAGT----GTCTCAGACAACAAATG-----------------AAGA---------TTGCTAAAATTAAATTAGGAAAAGTAAAAGATCT-----AAA--------------------------------CA----------------------TTCCCC---T--------------------------AA---------------------------------------------------------------------------------------------------------------------------------A----TATATATATAATTCTC----TGCTCTGCTTCAACAGGTGCCGAGCCGTCTCCGGCCTACTTCAACATTCTGATGTGGGGCAATGAGSizeHit CountTotal NormTotal
No Reads
droBia1
CTGGTCGGGCGGCAAGTCGTCCATTCTCAACTATCTGACCGACAACGAGTACACCCCTAACTCTTTGAGAACTGGTGAGTTTGA-----------------------------AAATGTTTAAAAAGCCACATTTAAAATAGATAAGCCTCAGTCA---------------------TC--------------------------------------------------------------------------------------------------------------------------------------------------GATTTCTAGCTTGATAA-ATGCTTCCT---------------------------------------------AACT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAG------------------A------------------------------------------------------------TTT--------CACCCATAAAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT-----TGTGCTTCCCAACAGGTGCCGAACCCTCTCCGGCCTACTTCAACATCCTGATGTGGGGCAACGAGSizeHit CountTotal NormTotal
No Reads
droTak1
C------------------------CTCAACTATCTGACCGACAACGAGTACACCCCCAACTCTTTGAGAACTGGTGAGTATA-------------------------------------------------------T-----------CAGTATTTATAATACTTATTTCTTAAATCGAACGAGGACTAACG--TTC-ATTTTTAAAATATTAAA-TAAATTATGGCGTCAAA--AAGGGAAAAAAATAAAAATATTTTTTTGTA--CAGTCCTTTTTTA--CTTTAAAATTATCTTAAAATTCTTA-----------ATGCAGA-TTCTAGCTTGATAAAATGTTTTAA---------------------------------------------AACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGAAAAT--------G------------------TCTAGAAATTCAACATA-----------------------------------------------------------------------------------------------------------TTGATTCAGAAAAAGTGAAAAATATATTA-AAA--------------------------------TT----------------------TTCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTATATATTT---TC----CTTTGCTTTCCAACAGGTGCCGAACCCTCTCCGGCCTACTTCAATATTCTGATGTGGGGCAATGAGSizeHit CountTotal NormTotal
No Reads
droEle1
C------------------------CTTAACTATCTGACCGACAACGAGTACACACCTAACTCTTTGAGAACTGGTACGTATT-------------------------------------------------------TAATATAA----TAGT----ATCATTTTTAAATTAAGAATCA-----------ACCTATTCAATTTTTAAAATATAAAACTAAATAAACGTGTTAAGTCATGGT--------------------ATGTATGAAGCCTTGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAT----------------------------------------------------------------ATTATATATAGTATATTTCAAAAGATCTTTAAGGCTCATACT----------TTTCAAAATTTAATTTATTTACACCTCAAAAATTATTTGTTTTAATTTAAGTTGTCTTTTAAAAATGTTTAAAGATATAAAGAATTTATAATGGTGTTTTGTAAAACAATTTAAACTTAAAATTCAACCTATATTAATTATATAAATATTCTTTATTCCAATAAAATTTACCTTAACT----G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT---TT----CCCCAACCAAAAACAGGTGCTGAACCCTCTCCGGCCTACTTCAACATTCTGATGTGGGGCAACGAGSizeHit CountTotal NormTotal
No Reads
droRho1
C------------------------CTTAACTATCTGACCGACAACGAGTACACCCCTAACTCTTTGAGAACTGGTAAGCACG-------------------------------------------------------ATTG--------CTGAATTTATTATACTTAAATCAAGAACCG-----------ACCATTCC------CAAA--------------------------------------------------------------------------------------------------------------------------------------ACTTTTG----------------------------------------------------------AAAACTAGAAAATTGA---AAATCCAA--AGGATTTGTAAAATATTTAAAAAAAA---------------------------------------------GTGT----------------TCTATATAAATCTTACACAGATAAATAACCATCAAATATAGTACTTT----------------TCTCA--------------------------------TTACTCCACAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGAAAAACCTATAA-CA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-GTTCC----------------------CATGA------------AACCT---AT----TCCTGATCTCCAACAGGTGCTGAACCCTCTCCTGCCTACTTCAACATCCTGATGTGGGGCAACGAGSizeHit CountTotal NormTotal
No Reads
droFic1
C------------------------TTGAACTATTTGACCGACAACGAGTACACCCCCAACTCTTTGAGAACTGGTAAGTTAA--------AATATCAATTAGATCATTACAAAATTTAAT------------------------T------------------------------------AGAG--------------------------------------------------------------------------TT---------------------CC-------------------------------------------------------------------TG--TTCTTAAGTGTTTTCTTTTTTGAATAAGTGTAAAGTTTTTTAATCTACAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCTAAAAATCTATTTTGCA----------------------TTCCTC---T--------------------------AA--------------------------------------------------------------------------------------------------------------------------------------------TTCTT---TT----CCCTGTTCCTCGACAGGTGCTGAGCCATCTCCCGCCTATTTCAACATCCTGATGTGGGGCAACGAGSizeHit CountTotal NormTotal
No Reads
droKik1
C------------------------CTGAACTATCTTACGGACAACGAGTACACCCCCAACTCTCTGCGAACTGGTAAGTATT-------------------------------------------------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTAACTTAGGGTC--------------ATTATA-ATCATAAATAATGACCACATGCATTACC----------------------AAGCTTT----AACA--------------------------------CA----------------------TTCGCT---C--------------------------AA--------------------------------------------------------------------------------------------------------------------------------------------ATTT---CTT----TATTGATTTCCTACAGGTGCCGAACCCTCTCCGGCCTACTTCAACATTCTGATGTGGGGCAATGAGSizeHit CountTotal NormTotal
No Reads
droAna3
C------------------------CTTAACTATTTGACCGATAATGAATACACACCGAATTCGCTCAGGACGGGTAAGTAAA-------------------------------------------------------C--------------------------------------------------------------------------------------------------------------------------------------TTTGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGAAT--------------TCT-------------AAATTCCTAA-----ATTA----------------------CAGCTAA----A---ATTGTAAAAATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCTCATTCAATATGCAACAGGTGCTGAACCCTCTCCGGCCTACTTCAATATCTTGATGTGGGGCAACGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAATATCTTGATGTGGGG.......2112.002011000
..........................................................AATTCGCTCAGGACGGGTGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
................................................ATACACACCGAATTCGCTCAGGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATATCTTGATGTGGGGCAACGA.2411.001010000
................................................ATACACACCGAATTCGCTCAGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..................................................ACACACCGAATTCGCTCAGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAATATCTTGATGTGGGGCAAC...2511.001001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATATCTTGATGTGGGGC......1911.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATATCTTGATGTGGGG.......1811.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTCCGGCCTACTTCA.......................1811.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTGATGTGGGGCAACG..1911.001010000
...............................TATTTGACCGATAATGAATACACACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
...............................................AATACACACCGAATTCGCTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATATCTTGATGTGGGGCA.....2111.001000010
droBip1
C------------------------CTGAACTATTTAACCGACAATGAGTACACACCGAATTCGCTCAGGACTGGTAAGTGAA-------------------------------------------------------C--------------------------------------------------------------------------------------------------------------------------------------TTTGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGATG--------------TATATATAAGATCAATAATTTCCAAA-----TATG----------------------AAGCTAA----A---AATTCATAAATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCTCATTCGATATGTAACAGGTGCTGAGCCCTCTCCGGCCTACTTCAATATTCTGATGTGGGGCAACGAGSizeHit CountTotal NormTotal
No Reads
dp5
C------------------------AAATGATGTATGTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------ATCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTATCCACAT---T-----------------TTAGGTGCCGAACCCTCTCCGGCCTACTTCAATATCCTGATGTGGGGCAATGAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAATATCCTGATGTGGGG.......2111.0010100000000
droPer2
C------------------------CTTAACTATTTGACCGACAACGAGTACACCCCCAATTCGCTGAGAACTGGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
T------------------------CTTAACTATTTGACTGACAATGAATATACACCCAACTCATTGAGAACCGGTAAGTAAA-------------------------------------------------------CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................TGACTGACAATGAATATACACCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00330000
.............................ACTATTTGACTGACAATGAATATACACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000
..............................CTATTTGACTGACAATGAATATACACCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000
................................ATTTGACTGACAATGAATATACACCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
............................AACTATTTGACTGACAATGAATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
.............................ACTATTTGACTGACAATGAATATACACCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000
droVir3
T------------------------CTGAACTATTTGACCGACAACGAATATACGCCCAACTCGCTGAGAACCGGTAAGGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................GAACTATTTGACCGACAACGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000100
...................................................TACGCCCAACTCGCTGAGAACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000100
....................................................ACGCCCAACTCGCTGAGAACCGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
droMoj3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCGCGGAACCGTCGCCGGCTTACTTCAACATTCTGATGTGGGGCAATGAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
T------------------------CTCAACTATTTGACTGACAACGAATACACGCCCAACTCGTTGAGAACCGGTAAGTTTGAGAGAAAGAATGCTAATAACAATATGATATAATTGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:27 AM