ID:

dsi_30275

 Coordinate:

3r:11375032-11375264 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-45.1 -44.9 -44.9

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
Gypsy8-I_Dpse-intLTRGypsy+
(CAG)nSimple_repeatSimple_repeat+

Sense Strand Reads

ATTGTTGCTGCGAGAACGGTGAGCCTCAGAATGCGCCTGAAGTTGCAACTGCAACGGTAGCGGCAACATCTGTGGCAGCAACATCTGCGGCAGCAGCATCATGGTTGGTAGAAGTGGCCGCCCCATAGCTCTCCAGGGGCTCCCTGCTGTATGCCATGGTTTTAATGACATACACCGACTATAATTATTAGCAGAGGTGTGGACATCGTCACAGCAGCAGCAGCAGCGGCAATTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAGTATTATTGCGCAGATCGTCGCTGCAACAGCAACACCACCCACACACGCCAGCAGCAACGGCAA
****************************************************************************........((((.((.((.((((((((((...(((.((.((..(((((...........))))).)))).)))...))))))))..........((((((..(((.......)))....))))))(((...)))...)).)).)).))))........*************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body		 O002
Head
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
................................................................................................................................................................................................................................................................................TTATTGCGCAGATCGTCGCTGCAAC.................................... 25 0 1 2.00 2 2 0 0 0 0 0 0
.....TGCTGCGAGAACGGTGAGCCT................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0
....................................................................TCTGTGGCAGCAACCCCTGCGG................................................................................................................................................................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0
.................................................................................................................................................................................................................................................................................TAGTGCGCAGAGCGTCGCT......................................... 19 2 1 1.00 1 0 1 0 0 0 0 0
...........................................................................................................................................................................................................CATCGTCACAGCAGCGGC................................................................................................................ 18 1 1 1.00 1 0 1 0 0 0 0 0
............................................................................AGCAACATCTGCGGCAGC............................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0
..............AACGGTGAGCCTCAGAATGCGCC........................................................................................................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................TTATTGCGCAGATCGTCGCTGC....................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................AGCAGCAGCAGCGGCAATT................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0
......GCTGCGAGAACGGTGAGCCTCAGA............................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................CACCAGTATTATTGCGCAGATCGTCGC.......................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
............................GAATGCGCCCGAAGTT................................................................................................................................................................................................................................................................................................. 16 1 3 0.33 1 0 1 0 0 0 0 0
...........................................................................................................................................................................................................CATCGTCACAGCAGCGGCC............................................................................................................... 19 2 3 0.33 1 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................AGCAGCCGCGGCAAT.................................................................................................... 15 1 20 0.10 2 0 2 0 0 0 0 0
............................................................................................................................................................................................................ATCGTCACAGCAGCGGCC............................................................................................................... 18 2 13 0.08 1 0 1 0 0 0 0 0
..............................................................................................................................................................................................................CGTCACAGCAGCGGC................................................................................................................ 15 1 14 0.07 1 0 1 0 0 0 0 0
..............................................................................................................................................................................................GCAGAGCTGTGGACA................................................................................................................................ 15 1 15 0.07 1 0 0 0 0 0 0 1
..........................................................................................................................................................................................................ACATCATCACAGCAGCTG................................................................................................................. 18 2 16 0.06 1 0 1 0 0 0 0 0
............................................................CGGCAGCATCTGTGGGA................................................................................................................................................................................................................................................................ 17 2 20 0.05 1 0 0 1 0 0 0 0

Anti-sense strand reads

TAACAACGACGCTCTTGCCACTCGGAGTCTTACGCGGACTTCAACGTTGACGTTGCCATCGCCGTTGTAGACACCGTCGTTGTAGACGCCGTCGTCGTAGTACCAACCATCTTCACCGGCGGGGTATCGAGAGGTCCCCGAGGGACGACATACGGTACCAAAATTACTGTATGTGGCTGATATTAATAATCGTCTCCACACCTGTAGCAGTGTCGTCGTCGTCGTCGCCGTTAACGTCAGCGGACGTCGTTAACTATAGCTGCGGTGGTCATAATAACGCGTCTAGCAGCGACGTTGTCGTTGTGGTGGGTGTGTGCGGTCGTCGTTGCCGTT
***************************************************************************************************........((((.((.((.((((((((((...(((.((.((..(((((...........))))).)))).)))...))))))))..........((((((..(((.......)))....))))))(((...)))...)).)).)).))))........**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 M025
embryo
..................................................CGTTGCCATCGCCGT............................................................................................................................................................................................................................................................................ 15 0 2 0.50 1 1 0 0 0 0
...................................................GTTGCCATCGCCGTTG.......................................................................................................................................................................................................................................................................... 16 0 2 0.50 1 1 0 0 0 0
..................................................CGTTGCCATCGCCGTT........................................................................................................................................................................................................................................................................... 16 0 2 0.50 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................TACTATAGCTGCGGTG.................................................................. 16 1 2 0.50 1 1 0 0 0 0
.................................................................................................................................AGAGGGCCCCGAGGG............................................................................................................................................................................................. 15 1 6 0.17 1 0 0 0 1 0
..........................................................................................................................................................................................................................................................................................................CGTTGTGGTGGGTGT.................... 15 0 6 0.17 1 1 0 0 0 0
................................................................................................................................................................................................................................................................TAGCTGTGGTGGTCCTAAAA......................................................... 20 3 7 0.14 1 1 0 0 0 0
............................................................................................................................................................................................................................................................................................................TTGTGGTGGGCTTGTGCGGG............. 20 3 7 0.14 1 0 0 1 0 0
....................................................ATCCCATCGCCGCTGTAGA...................................................................................................................................................................................................................................................................... 19 3 7 0.14 1 0 0 0 0 1
...............................ACGCGAAGTTCAACGTTG............................................................................................................................................................................................................................................................................................ 18 2 17 0.06 1 1 0 0 0 0
....................................................................................................................CGGCGGGATATGGAGGGGT...................................................................................................................................................................................................... 19 3 18 0.06 1 1 0 0 0 0
................................................................................................................................................................................................................................................................................................................GGTGGGTGTGTGCGGGCGA.......... 19 2 19 0.05 1 0 0 1 0 0
...................................................................................................................................................................................................................................................................CCGCGGGGGTCATAA........................................................... 15 2 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:11374982-11375314 + dsi_30275 ATTGTT-GCTGCGAGAACGGT-GAG---CCTCAGAA---TGCGCCTG------------AAG---TTGCAA---------------------------------------------------CTG------CAACGGTA-GCGGCAACATCTGTGGCAGCAACATCTGCG------------------GCAGCAGC---------------ATCA------------------------------------------------------------------------------------TGGTTGGTAGAAGTGGCC---GCCCCATAGCT--CTC------------------CAG-----------------------------GGGCTCCCTGCTGTATGCCATGGTTTTAATGACATACA----------------------------CCGACTATAATTATTAGCAGAGG-----------------TG----T-------------------------GG--ACATCGTCA-CAGCAGCAG-------------------------------C---AGCAGCGGCAATTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCA------------------------ACACCACCCACACACGCCAGC------AGCAACGGCA-A
droSec2 scaffold_0:12204214-12204492 + ATTGTT-GCTGCGAGAACGGT-GAG---CCTCAGAA---TGCGCCTG------------AAG---TTGCAA---------------------------------------------------CTG------CAACGGTA-GCGGCAACATCTGTGGCAGCAACATCTGCG------------------GCAGCAGC------ATCAGCAGCAACA---------------------------------------------------------------------------GTGGCGACTG------------TTGCCACAGG-----------------AGCAG----------CGG---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAG-------------------------------C---AGCAGCGGCAATTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCAGCAGCACCAGCAA------CAGCAACACCACCCACACACGCCAGC------AGCAACGGCA-A
dm3 chr3R:9808266-9808523 - ATTGTT-GCTGCGAGAACGGC-GAG---CCTCAGAA---TGCGCCTG------------AAG---TTGCAA---------------------------------------------------CTG------CAACGGTA-GCGGCAACATCTGTGGCAGCAACATCTGCG------------------GCAGC------------------AACAG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CGG---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGTAG-------------------------------C---AGCAGCGGCAATTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCAGCAGCACCAGCAA------CAGCAACACCACCCACACACGCCAGC------AGCAACGGCA-A
droEre2 scaffold_4770:9351821-9352090 - ATTGTT-GCTGCGAGAACGGA-GAG---CCTCAGAA---TGCGCCTG------------AAG---TCGCAA---------------------------------------------------CTG------CAACGGTA-GCGGCAACATCTGTGGCAGCAACATCTGCA------------------GCAGCAGCATCAGCATCAGCAACAACAG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CGG---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAGCAG-------------------------------C---AGCAGCGGCAATTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCAGCAGCAGCAGCA------------ACACCACCCACACACGCCAGC------AGCAACAGCA-A
droYak3 3R:16623049-16623324 + ATTGTT-GCTGCGAGAACGGA-GAG---CCTCAGAA---TGCGCCTG------------AAG---TCGCAA---------------------------------------------------CTG------CAACGGTA-GCGGCAACATCTGTGGCAGCAACATCTGCA------------------ACAGCAGC---AGCATTAGCAACAACAG------------------------------------------------------------------------------------------------TCGCGACAGG-----------------AGCAG----------CGG---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAGCAG-------------------------------C---AGCAGCGGCAATTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCAGCAGCAGCAGCACCAGCAAC---AACACCACCCACACACGGCAGC------AGCAGCAGCA-A
droEug1 scf7180000409802:145235-145504 + ATTGTT-GCTGCGAGAACGGA-GAG---CCGCAGAA---TGGGCCTG------------AAA---TTGCAA---------------------------------------------------CTGCAACAGCAACAGCA-AGTGCAACATCTGTAGCAGCAACATCTGCG------------------GCAACATC------ACCAGCAGCAACAG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CGG---C-----A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGTAG-------------------------------C---AGCAGCGGCAATTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCAGCAACAGCAACA------------GCACCACCCACATACGCCAGC------AGCAACAGCA-A
droBia1 scf7180000302402:2579073-2579320 - ATTGTT-GCTGCGAGAACGGA-GAG---CCGCAGAA---TGGGCCTG------------AAA---TTGCAA---------------------------------------------------CTGCAACTGCAACGGCA-ACGGCAACATCTGTAGCAGCAACATCTGCG------------------ACGGCAGC---------AGCAGCAACAG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CCC---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAG-------------------------------C---AGCAGCGGCAACTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCAGCAGCAACA-------------------------------GCAGC------AACAGCAGCA-A
droTak1 scf7180000415380:687414-687674 - ATTGTT-GCTGCGAGAACGGA-GAG---CCGCAGAA---TGTGCCTG------------AAA---TTGCAA---------------------------------------------------CTG------CAA-------CGGCAACATCTGTAGCAGCAACATCTGCA------------------GCAGCAAC---AGCAACGGCAGCAACAA------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CGG---C-----A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAG-------------------------------C---AGCAGCGGCAACTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCAGCAGCACCAGCA------------ACACCACCCACACACGCCAGC------AGCAACAGCA-A
droEle1 scf7180000491047:1357461-1357718 + ATTGTT-GCTGCGAGAACGGA-GAG---CCGCAGAA---TGGACCTG------------AAG---TTGCAA---------------------------------------------------CTG------CGA-------CGGCAACATCCTTAGCAGCAACAACTGCG------------------GCAGCAGC---------------AACAG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CGG---C-----A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAG-------------------------------C---AGCAGCGGCAACTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCAGCAGCAGCAGCAA------C---ACCACCACCCACACACGCCAGCAACAACAGCAGCAGGA-A
droRho1 scf7180000779664:16523-16768 + ATTGTT-GCTGCGACAACGGA-GAG---CCGCAGAA---TGGACCTG------------AAA---TTGCAA---------------------------------------------------CTG------C------A-GCGGCAACATCTGTAACAGCAACATCCGCG------------------GCAACAGC---------------AACAG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CGG---C-----A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAG-------------------------------C---AGTAGCGGCAACTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCAGCAGCAGCA---------------ACACCACCCACACACGCCAGC------AACAACAGCA-G
droFic1 scf7180000453912:315779-316027 - ATTGTT-GCTGCGAGAACGGA-GAG---TCGCAGAA---TGGGCCTG------------AAA---GTGCAA---------------------------------------------------CGG------CAGCGGCA-ACAGCAACATCTGTAGCTGCAACATCTGCG------------------GCAGCAGC---------------AACAG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CGG---C-----A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAGCAG-------------------------------C---AGCAGCGGCAACTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCATCGCTGCAACAGCAGCAGCAGCAA------------------CACCCACACACGCCAGC------AACAGCAACA-C
droKik1 scf7180000302398:418759-419058 - GCTGTCAGCGGCATGAATGGC-AATCATCCGCTGAACTTTGTGCTGG------------ACA---TGGCGG---------------------------------------------------CGG------------CA-ACGGCAA-ACCTGCAGAAGCATCCCCAGCA------------------GCAGCAGCAACAGCAGCAGCAGCAGCAG------------------------------------------------------------------------------------------------GCGC-ACAATAAC-----GGTTTCA----------ATGT------------------------------------GGCCGACTTTGGCATGCC-TGGTTTTGATAGTCT-CAACATGACG--------------------GCCTCAGC-ATTCCT---AGATC-----------------------------------------------TAGAGCACA--------CGCTGCAG-------------------------------C---AGCAGCATCAACAGCAA-CACCAGCAGCAG-----------------------------------------------CAACAACATCAACAGCAGCAGCAGCA---------------ACACCAC-------CAGCAAC------AACACCAGCA-A
droAna3 scaffold_12943:4150680-4151002 + AGTGGG-GCAGCCAGCACATG-G-----CCGCC-----------ATG---------CAGCAGCAGCAGCAG-----------------------------------------------------G------CGGCGGCG-GC-CCAACAGCAGCAGCAGCAAGCCCAGCA------------------GCAGGCGG------CG------------------------------------------------------------------GCCCAACAACAACAGCAGCAACAGCAAGCA------------GCGCCGCAAC-----------------AGCAG----------CAG---G-----CAGCCATGCTGCAGGCA---------------------------------------CA----------------------------GCAGCAAC-ATCACC-------------A-GCAACAGATGAG----CA-TGTACGGCCAGGCGATG--------------------GGGCAGCAA-------------------------------C---AGCAACAGCAACCCCAAGC-CCCGCAACAGGTTGT------GCCACCAGTGGCGG-C--------TCAACAG--CAACCTCCGCAACAACAGCAGCAACAGCAACA-------------------------ACAGCAGC------AGCAGCAACA-A
droBip1 scf7180000396413:1732122-1732375 - ATTGTT-GCTGCCAAAACGGA-GAG---CCGCAGAA---TGTGGCCA------------A-----CAATACGTTG-----AGCAGCA----TTTTGGCCACACCGCCTGAATCGCCACCAGC----------AGCA----------------GTGGCTGCAACATCTGCT------------------GCAAGTGG------AGGAGCCGCAACA---------------------------------------------------------------------------------------------------GCAACAGG-----------------AGCAA----------CGG---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAGCAG-------------------------------C---AGTAGCGGCAATTGTAGTCGCCTTCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCATCGCTGCAGCAACAA----------------------------------------CAAC------AACAACAGCA-A
dp5 XL_group1e:5883035-5883354 - AGTGTA-GTGTGTCGC------------ACGCGCGACTGTGTGTGTGTGAATAATGAAGAAG---AAGCAG---------------------------------------------------AAA------CAACAGCA-GCAGCAGAGGCAGAGGCAGCAGCAGGTGCA------------------GCAGCAGCAGCAGCATCAGCATCAGCAG------------------------------------------------------------------------------------------------CAGAGGCAGG-----------------GCAAGGCGCCATCTG---AGGCAGAGTCGGA-------------------------------------------GACAGA-G-CG--------TTGCAACAATTCGCGTCGCAGTAGCGCC-GCCAGCAACAACAACAAATA-GCAAAAACTGAG----CAGCGTTCGGCAAAGC---------------------------------------------------------------------------GCAA-------------------------------CAACAAT------------TACAATTGCAA-----CC---------AAATCGGCAACAAAATCA------------ACAACAAACAT-CAATACAAC------AACAGCGGCA-A
droPer2 scaffold_88:40731-41024 + GTAATG-GCTCCGCAACAGCA-GGT---TCCC------------ATG------------CAA---TTACAA---------------------------------------------------GTA------CAAATGCAGGTACCTACATCTGTAGCCCCAACAA-TGCA------------------GCAGCAGC---------------AGCCGTACCAACAGGGCCAGCAGATGGCCCCTCCAAGTGGCCAAATGGCACTTGGTGAGG------------------------------------------TTCAACAGC-----------------AGCAG----------CCG---C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACAGCAACATGCTACATTTGCGACAGTCTCCG-TG---------C-------------AGCAACCACAATTTATGCAGCCGATACAAC------------TATCATTGCCC--T---------TGGA------GCAACAATTACA------------ACAGCTCCTGCTCA-GTCAGC------AGCAGCAGCA-G
droWil2 scf2_1100000003789:1720-2026 - ATGGCA-GCAACAACAACAGC-AA-----------------------------------------CAACAACTGC-----AGCAGCAACAATTGCAGCAA-------------------------------------CA-AC------AGCAACAGCAGCAACAACAGCAGCAACAACAACAGCAGCAGCAACAGC------AGCA---------------------------------------------------------------------------------------------T------------CAGCAACAGCAAC-----AGCAGCAGCG-AATGCAACAGCAA---CAGCAACAGCAGC-------------------------------------------AACAATTG-CA----------------------------GCAACAAC-AACAACA------------------------------------------------------------------------GCAGCAG-------CAACAACAGCAACAGCAACAACAACAG----------------------CAGCAG----CAACAGCAACAACAGCAG---CAGCAGC--AGCAA--------------CTGCAACAACAGCAGCAGCAACAGCAA------CAACAA---------C-AACATCAGC------AGCAACAGCA-A
droVir3 scaffold_12963:8332955-8333282 + ACAACA-ACAACAACAACGGCTAAG---CCGCACAC---AA------------------------CAATAAGCACAACAG------------------------------------------CAACAACTGCAACCACA-ACAACAACAACAGCAGCAGCAACATCAACA------------------GCAGCAGC---AGCAGTAGCAGCAACAA------------------------------------------------------------------------------------------------TTGCT-----------------------------------------------------------TCCAGCACAGTGCATCCATTTTTAATGTCA-----------------------------------------------------------CC-------------GTTCGACAAATTGCCCTTCA-TGGACACC--AGCTATGAGGTAAGACCACACCAGCAGCAGCAGCAG-------------------------------C---AGCAGCAACAGTTGCAGCTGTTAGCCG--AGCAACAGCGACCGCAGCAA---TTTCATCATTATCAGCACGCGCCG--------------AGCAGCAGCAGCAG--------------------------CACAACAAC------AACAATGGCA-A
droMoj3 scaffold_6496:19027091-19027389 + GCAGCA-GCAGCAACAGCAGC-AA-----------------------------------CAG---CAGCAA---------------------------------------------------CAG------CAGCAGCA-GCAGCAACAGCAGCAGCAGCAACAACAGCA------------------GCAGCAAC------AACATCAGCAGCA---------------------------------------------------------------------------GCAGCAACAT------------CATCATCAGCAGC-----AGCAGCA----------ACATCAGCAGCAGCAGCAGCAGC-------------------------------------AGTGGCATCAGCAG-CA----------------------------GCAGCAAC-ATCAGCAGCAGCAG-------------------------------------------------------------------------------CAGCAACATCAGCAGCAGCAGCAG---------CAGCAG--------------------CAGCAGCAGCAGCAGCAG---TGGCA--------TCAGCAG--CAGCAGCAGCAGCAACAGCAGCAGCAGCAACA------------G---------T-GGCAACAGC------AGCAACAGCATA
droGri2 scaffold_15112:5118240-5118531 - TCAGCA-GCAGCAGCATCAG---------------------------------------------CAGCAG---------------------------------------------------CAG------CATCAGCA-GCAGCAGCATCAGCAGCAGCAGCATCAGCA------------------GCAGCAGC------ATCAGCAGCAGCA---------------------------------------------------------------------------GCATCAGCAG------------CAGCAGCAGCAGC-----AGCGTCA----------ACATCAGCAGCAGCAGCAGCAGC-------------------------------------AGTTAAAACAACAG-CA----------------------------GCAGCAAA-AACAGCAGCAGCAG-------------------------------------------------------------------------------CTAAAACAGCAACAGCATCAGCAGCAGCAGCAGCATCAG-----------------------------CAGCAGCAG---CAG--------CAGCAGCTA--AAACAGCAACAGCATCAGCAGCAGCAGCAGCA------------TC----------AGCAGCAGC------AGCAGCAGCA-G

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATTGTT-GCTGCGAGAACGGT-GAG---CCTCAGAA---TGCGCCTG------------AAG---TTGCAA---------------------------------------------------CTG------CAACGGTA-GCGGCAACATCTGTGGCAGCAACATCTGCG------------------GCAGCAGC---------------ATCA------------------------------------------------------------------------------------TGGTTGGTAGAAGTGGCC---GCCCCATAGCT--CTC------------------CAG-----------------------------GGGCTCCCTGCTGTATGCCATGGTTTTAATGACATACA----------------------------CCGACTATAATTATTAGCAGAGG-----------------TG----T-------------------------GG--ACATCGTCA-CAGCAGCAG-------------------------------C---AGCAGCGGCAATTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCA------------------------ACACCACCCACACACGCCAGC------AGCAACGGCA-ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTGCGC--AGATCGTCGCTGCAAC...................................................................2512.00200200000000000000
.....T-GCTGCGAGAACGGT-GAG---CCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
.............................................................................................................................................................AGCAACATCTGCG------------------GCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
...............AACGGT-GAG---CCTCAGAA---TGCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTGCGC--AGATCGTCGCTGC......................................................................2211.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG-------------------------------C---AGCAGCGGCAATT................................................................................................................................................1911.00100000100000000000
.......GCTGCGAGAACGGT-GAG---CCTCAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAG------------TATTATTGCGC--AGATCGTCGC.........................................................................2711.00100100000000000000
droSec2
ATTGTT-GCTGCGAGAACGGT-GAG---CCTCAGAA---TGCGCCTG------------AAG---TTGCAA---------------------------------------------------CTG------CAACGGTA-GCGGCAACATCTGTGGCAGCAACATCTGCG------------------GCAGCAGC------ATCAGCAGCAACA---------------------------------------------------------------------------GTGGCGACTG------------TTGCCACAGG-----------------AGCAG----------CGG---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAG-------------------------------C---AGCAGCGGCAATTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCAGCAGCACCAGCAA------CAGCAACACCACCCACACACGCCAGC------AGCAACGGCA-ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................GAA---TGCGCCTG------------AAG---TTGCAA---------------------------------------------------CT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020200
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACACGCCAGC------AGCAACGGC...2211.0010010
..........GCGAGAACGGT-GAG---CCTCAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...........................................................................................................................................................................................................................................................................................................G------------TTGCCACAGG-----------------AGCAG----------CGG---C-----.....................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
......................................................................................................................................................................................................................................................................................................................................................AG----------CGG---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAG-------------------------------C---AGCAGCGGC....................................................................................................................................................2511.0010010
.........................................................................................................................................................................G------------------GCAGCAGC------ATCAGCAGCAACA---------------------------------------------------------------------------GTGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCACCAGCAA------CAGCA.......................................2260.1710010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCACCAGCAA------C...........................................19160.0610010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCACCAGC....................................................18200.0511000
dm3
ATTGTT-GCTGCGAGAACGGC-GAG---CCTCAGAA---TGCGCCTG------------AAG---TTGCAA---------------------------------------------------CTG------CAACGGTA-GCGGCAACATCTGTGGCAGCAACATCTGCG------------------GCAGC------------------AACAG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CGG---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGTAG-------------------------------C---AGCAGCGGCAATTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCAGCAGCACCAGCAA------CAGCAACACCACCCACACACGCCAGC------AGCAACGGCA-ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........CTGCGAGAACGGC-GAG---CCTCAGAA---TG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGC--AGATCGTCGCTGCAACAGC................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................AG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CGG---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGT..................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGCGAGAACGGC-GAG---CCTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAG-------------------------------C---AGCAGCGGCAATTGC..............................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AACAG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------.................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACGCCAGC------AGCAACGGCA-.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................G----------CGG---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGTAG-------------------------------C---AGCAGCGGCA...................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TGCAA---------------------------------------------------CTG------CAACGGTA-GCGGCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-------------------------------C---AGCAGCGGCAATTGCA.............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TGCGCCTG------------AAG---TTGCAA---------------------------------------------------CTG------CAACGGTA-.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AG---CCTCAGAA---TGCGCCTG------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGCGAGAACGGC-GAG---CCTCAGAA---TGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CAGAA---TGCGCCTG------------AAG---TTGCAA---------------------------------------------------CTG------C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTGCGC--AGATCGTCGCTGC......................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTGCGC--AGATCGTC...........................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CAGG-----------------AGCAG----------CGG---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA....................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.TTGTT-GCTGCGAGAACGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCCACCAG------------TATTATTGCGC--...................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................AACAG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CG...............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..............GAACGGC-GAG---CCTCAGAA---TGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....T-GCTGCGAGAACGGC-GAG---CCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCAGAA---TGCGCCTG------------AAG---TTGCAA---------------------------------------------------C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................ACGGTA-GCGGCAACATCTGTGGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................CAA---------------------------------------------------CTG------CAACGGTA-GCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGCCACCAG------------TATTATTGC.......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CTCAGAA---TGCGCCTG------------AAG---TTGCAA---------------------------------------------------CT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................................A---TGCGCCTG------------AAG---TTGCAA---------------------------------------------------CTG------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGC--AGATCGTCGCTGCA.....................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AACAG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGC.............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGC--AGATCGTCGCTGCAACAGCAG..............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC--AGATCGTCGCTGCAACAGCAGCAGC..........................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................AG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CGG---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------........................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
........CTGCGAGAACGGC-GAG---CCTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG-------------------------------C---AGCAGCGGCAATTGCAGG...........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CGGTA-GCGGCAACATCTGTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................AACGGTA-GCGGCAACATCTGTGGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTGTT-GCTGCGAGAACGGC-GAG---CC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................GCAA---------------------------------------------------CTG------CAACGGTA-GCGGCAACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................TGTGGCAGCAACATCTGCG------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CAGAA---TGCGCCTG------------AAG---TT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCACACACGCCAGC------AGCA........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCCACCAG------------TATTATTGCG......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.................................................................................................................................................................................................................................................................................................................................G-----------------AGCAG----------CGG---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGTAG-------------------------------C---AGCAGCGGCAA..................................................................................................................................................3111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TGCGCCTG------------AAG---TTGCAA---------------------------------------------------AA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCACCAGCAA------CAGCAAC.....................................2430.3310000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTAG-------------------------------C---AGCAGCGGCA...................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACCAGCAA------CAGCAACA....................................1960.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGTAG-------------------------------C---AGCAGCGGC....................................................................................................................................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCACCAGCAA------CAGCA.......................................2160.1710000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGCACCAGCA...................................................18160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCACCAGCAA------CAGCAC......................................22180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCACCAGCAA------CAGCAAA.....................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCACCAGC....................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droEre2
ATTGTT-GCTGCGAGAACGGA-GAG---CCTCAGAA---TGCGCCTG------------AAG---TCGCAA---------------------------------------------------CTG------CAACGGTA-GCGGCAACATCTGTGGCAGCAACATCTGCA------------------GCAGCAGCATCAGCATCAGCAACAACAG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CGG---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAGCAG-------------------------------C---AGCAGCGGCAATTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCAGCAGCAGCAGCA------------ACACCACCCACACACGCCAGC------AGCAACAGCA-ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATATCGACGCCACCAG------------T...............................................................................................1911.0010000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACGCCACCAG------------TATTATT.........................................................................................2111.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC--AGATCGTCGCTGCAACAGCAGCAGCA.........................................................2811.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCACCAG------------TATTATTGCGC--AGATCGTC...........................................................................2811.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTGCGC--AGATCGTCGCTGC......................................................................2311.0010000010
.............................................................................................................................................................AGCAACATCTGCA------------------GCAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.0910000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCA------------ACACCA.................................21200.0510000100
............................................................................................................................................................................................GCAGCAGCATCAGCATCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100
.........................................................................................................................................................................A------------------GCAGCAGCATCAGCATCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010000
.........................................................................................................................................................................A------------------GCAGCAGCATCAGCATCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510001000
droYak3
ATTGTT-GCTGCGAGAACGGA-GAG---CCTCAGAA---TGCGCCTG------------AAG---TCGCAA---------------------------------------------------CTG------CAACGGTA-GCGGCAACATCTGTGGCAGCAACATCTGCA------------------ACAGCAGC---AGCATTAGCAACAACAG------------------------------------------------------------------------------------------------TCGCGACAGG-----------------AGCAG----------CGG---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAGCAG-------------------------------C---AGCAGCGGCAATTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCAGCAGCAGCAGCACCAGCAAC---AACACCACCCACACACGGCAGC------AGCAGCAGCA-ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................GCAA---------------------------------------------------CTG------CAACGGTA-GCGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
..TGTT-GCTGCGAGAACGGA-GAG---.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCTGCAACAGCAGCAGCAGCAGCACC.................................................2911.00100100000000
......................................................................................................................................................................................................................................................................................................................................................AG----------CGG---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAGCAG-------------------------------C---AGCA.........................................................................................................................................................2011.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCAATTGATATCGAC....................................................................................................................1911.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------------------------C---AGCAGCGGCAATTGCAGTCGCCT......................................................................................................................................2511.00100010000000
..........................................................................................................................................................................................................................................................................................................................GCGACAGG-----------------AGCAG----------CGG---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGT.....................................................................................................................................................................................................2111.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCACCCACACACGGCAGC------............1911.00101000000000
...................................................................................................................................................................................................................AACAG------------------------------------------------------------------------------------------------TCGCGACAGG-----------------AGC.............................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
...................................................................................................................................................................................................................AACAG------------------------------------------------------------------------------------------------TCGCGACAGG-----------------AGCAG----------CGG---C-----.....................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCACCAG------------TATTATTGCGC--AGATCGTC...........................................................................2811.00100000010000
.................................................................................................................................................................................................................ACAACAG------------------------------------------------------------------------------------------------TCGCGACAGG-----------------AGCAG----------C................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAATTGATATCGACGC..................................................................................................................2011.00101000000000
........................................................................................................................................................................................................GCATTAGCAACAACAG------------------------------------------------------------------------------------------------TCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
..........................................................................................................................................A-GCGGCAACATCTGTGGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
......................................................................................................................................CGGTA-GCGGCAACATCTGTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
................................................................................................................................................................AACATCTGCA------------------ACAGCAGC---AGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.20100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCACCAGCAAC---A.......................................19140.07101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAGCAGCAG.....................................................19200.05101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACAGCAGCAGCAGCAG.....................................................20200.05101000000000
droEug1
ATTGTT-GCTGCGAGAACGGA-GAG---CCGCAGAA---TGGGCCTG------------AAA---TTGCAA---------------------------------------------------CTGCAACAGCAACAGCA-AGTGCAACATCTGTAGCAGCAACATCTGCG------------------GCAACATC------ACCAGCAGCAACAG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CGG---C-----A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGTAG-------------------------------C---AGCAGCGGCAATTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCAGCAACAGCAACA------------GCACCACCCACATACGCCAGC------AGCAACAGCA-ASizeHit CountTotal NormTotal
No Reads
droBia1
ATTGTT-GCTGCGAGAACGGA-GAG---CCGCAGAA---TGGGCCTG------------AAA---TTGCAA---------------------------------------------------CTGCAACTGCAACGGCA-ACGGCAACATCTGTAGCAGCAACATCTGCG------------------ACGGCAGC---------AGCAGCAACAG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CCC---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAG-------------------------------C---AGCAGCGGCAACTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCAGCAGCAACA-------------------------------GCAGC------AACAGCAGCA-ASizeHit CountTotal NormTotal
No Reads
droTak1
ATTGTT-GCTGCGAGAACGGA-GAG---CCGCAGAA---TGTGCCTG------------AAA---TTGCAA---------------------------------------------------CTG------CAA-------CGGCAACATCTGTAGCAGCAACATCTGCA------------------GCAGCAAC---AGCAACGGCAGCAACAA------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CGG---C-----A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAG-------------------------------C---AGCAGCGGCAACTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCAGCAGCACCAGCA------------ACACCACCCACACACGCCAGC------AGCAACAGCA-ASizeHit CountTotal NormTotal
No Reads
droEle1
ATTGTT-GCTGCGAGAACGGA-GAG---CCGCAGAA---TGGACCTG------------AAG---TTGCAA---------------------------------------------------CTG------CGA-------CGGCAACATCCTTAGCAGCAACAACTGCG------------------GCAGCAGC---------------AACAG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CGG---C-----A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAG-------------------------------C---AGCAGCGGCAACTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCAGCAGCAGCAGCAA------C---ACCACCACCCACACACGCCAGCAACAACAGCAGCAGGA-ASizeHit CountTotal NormTotal
No Reads
droRho1
ATTGTT-GCTGCGACAACGGA-GAG---CCGCAGAA---TGGACCTG------------AAA---TTGCAA---------------------------------------------------CTG------C------A-GCGGCAACATCTGTAACAGCAACATCCGCG------------------GCAACAGC---------------AACAG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CGG---C-----A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAG-------------------------------C---AGTAGCGGCAACTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCGTCGCTGCAACAGCAGCAGCAGCA---------------ACACCACCCACACACGCCAGC------AACAACAGCA-GSizeHit CountTotal NormTotal
No Reads
droFic1
ATTGTT-GCTGCGAGAACGGA-GAG---TCGCAGAA---TGGGCCTG------------AAA---GTGCAA---------------------------------------------------CGG------CAGCGGCA-ACAGCAACATCTGTAGCTGCAACATCTGCG------------------GCAGCAGC---------------AACAG------------------------------------------------------------------------------------------------TCGCCACAGG-----------------AGCAG----------CGG---C-----A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAGCAG-------------------------------C---AGCAGCGGCAACTGCAGTCGCCTGCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCATCGCTGCAACAGCAGCAGCAGCAA------------------CACCCACACACGCCAGC------AACAGCAACA-CSizeHit CountTotal NormTotal
No Reads
droKik1
GCTGTCAGCGGCATGAATGGC-AATCATCCGCTGAACTTTGTGCTGG------------ACA---TGGCGG---------------------------------------------------CGG------------CA-ACGGCAA-ACCTGCAGAAGCATCCCCAGCA------------------GCAGCAGCAACAGCAGCAGCAGCAGCAG------------------------------------------------------------------------------------------------GCGC-ACAATAAC-----GGTTTCA----------ATGT------------------------------------GGCCGACTTTGGCATGCC-TGGTTTTGATAGTCT-CAACATGACG--------------------GCCTCAGC-ATTCCT---AGATC-----------------------------------------------TAGAGCACA--------CGCTGCAG-------------------------------C---AGCAGCATCAACAGCAA-CACCAGCAGCAG-----------------------------------------------CAACAACATCAACAGCAGCAGCAGCA---------------ACACCAC-------CAGCAAC------AACACCAGCA-ASizeHit CountTotal NormTotal
No Reads
droAna3
AGTGGG-GCAGCCAGCACATG-G-----CCGCC-----------ATG---------CAGCAGCAGCAGCAG-----------------------------------------------------G------CGGCGGCG-GC-CCAACAGCAGCAGCAGCAAGCCCAGCA------------------GCAGGCGG------CG------------------------------------------------------------------GCCCAACAACAACAGCAGCAACAGCAAGCA------------GCGCCGCAAC-----------------AGCAG----------CAG---G-----CAGCCATGCTGCAGGCA---------------------------------------CA----------------------------GCAGCAAC-ATCACC-------------A-GCAACAGATGAG----CA-TGTACGGCCAGGCGATG--------------------GGGCAGCAA-------------------------------C---AGCAACAGCAACCCCAAGC-CCCGCAACAGGTTGT------GCCACCAGTGGCGG-C--------TCAACAG--CAACCTCCGCAACAACAGCAGCAACAGCAACA-------------------------ACAGCAGC------AGCAGCAACA-ASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................AACAGCAGCAGCAGCAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1941.506240000
................................................................GCAGCAG-----------------------------------------------------G------CGGCGGCG-GC-CCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................................C-----------ATG---------CAGCAGCAGCAGCAG-----------------------------------------------------G------CGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------A-GCAACAGATGAG----CA-TGTACGGC......................................................................................................................................................................................................................................2411.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA-------------------------------C---AGCAACAGCAACCCCAA............................................................................................................................................2211.001010000
...........................................................................................................................................................GCAGCAAGCCCAGCA------------------GCAGGCGG------C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGATG--------------------GGGCAGCAA-------------------------------C---AGCAA........................................................................................................................................................2211.001100000
...................................................................................................................................................................................................................................................................................................................................................................AG---G-----CAGCCATGCTGCAGGCA---------------------------------------CA----------------------------GC.............................................................................................................................................................................................................................................................................................2411.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG----CA-TGTACGGCCAGGCGATG--------------------GGGCAGC..................................................................................................................................................................................................2811.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGGCCAGGCGATG--------------------GG.......................................................................................................................................................................................................1811.001000001
...................................................................................................................................................................................................................................................................................................................................................................AG---G-----CAGCCATGCTGCAGGCA---------------------------------------CA----------------------------GCA............................................................................................................................................................................................................................................................................................2511.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGTTGT------GCCACCAGTGGCGG-C--------T...........................................................................................2511.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................TGCAGGCA---------------------------------------CA----------------------------GCAGCAAC-ATCACC-------------A-GC...............................................................................................................................................................................................................................................................2711.001010000
........................................................................................................................................................................................................................................................................................AACAGCAGCAACAGCAAGCA------------GCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACCCCAAGC-CCCGCAACA................................................................................................................................2111.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG-C--------TCAACAG--CAACCTCCGCAACAACAGC................................................................2911.001010000
.......................................................................................................................................................................................................................................................................................CAACAGCAGCAACAGCAAGCA------------GCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
............................................................................................................................................................................................................................................................................................................................CGCAAC-----------------AGCAG----------CAG---G-----CAGCCATGCT...........................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...................................................................GCAG-----------------------------------------------------G------CGGCGGCG-GC-CCAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACC-------------A-GCAACAGATGA......................................................................................................................................................................................................................................................1811.001010000
..........................................................................................................................................................AGCAGCAAGCCCAGCA------------------GCAGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...................TG-G-----CCGCC-----------ATG---------CAGCAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATGAG----CA-TGTACGGC......................................................................................................................................................................................................................................1911.001000001
.........................................................................................................................................................................................................................................................................................ACAGCAGCAACAGCAAGCA------------GCGCCGCAAC-----------------................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
.....................................................................................................................................................................................................................................................................................................GCAAGCA------------GCGCCGCAAC-----------------AGCAG----------CA...............................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCTCCGCAACAACAGCAGCA............................................................2311.001010000
......................................................................G-----------------------------------------------------G------CGGCGGCG-GC-CCAACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501010000
.................................................................................................................................................AACAGCAGCAGCAGCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.433120000
...............................................................AGCAGCAG-----------------------------------------------------G------CGGCGGCG-GC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.331010000
................................................................................................................................................CAACAGCAGCAGCAGCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.292110000
................................................................................................................................................CAACAGCAGCAGCAGCAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.251001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAACAGCAACA-------------------------ACAGC.....................2760.171010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-------------------------ACAGCAGC------AGCAGC......18200.153030000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACA-------------------------ACAGCAGC------AGCAGC......20200.153021000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAACAGCAACA-------------------------ACA.......................2690.111100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-------------------------ACAGCAGC------AGCAGCAAC...21200.102010001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACA-------------------------ACAGCAGC------AGC.........19200.102020000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA-------------------------ACAGCAGC------AGCAGCAACA-.21200.102000011
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACA-------------------------ACAGCAGC------AGCAGCAACA-.27100.101000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAACA-------------------------ACAGCAGC------AGC.........26160.061010000
.................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCAACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................22170.061010000
...................................................................................................................................................................................................................................................................................ACAACAACAGCAGCAACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.061010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAACAGCAACA-------------------------ACA.......................22180.061010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA-------------------------ACAGCAGC------AGCAGCAAC...20200.051000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAACAGCA......................................................20200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA-------------------------ACAGCAGC------AGCA........19200.051010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAGCAGCAACAGC.......................................................20200.051100000
.................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAACAGCAACA-------------------------A.........................20200.051010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA-------------------------ACAGCAGC------AGCAGCAACA-.23200.051010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACA-------------------------ACAGCAGC------AGCAGCA.....21200.051000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAACAGCAACA-------------------------AC........................22200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------ACAGCAGC------AGCAGCAACA-.19200.051000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCAACA-------------------------ACAGC.....................21200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACA-------------------------ACAGCAGC------AGCAGCA.....24200.051000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAACA-------------------------ACAGCAGC------AGC.........24200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-------------------------ACAGCAGC------AGCAGCAACA-.22200.051100000
droBip1
ATTGTT-GCTGCCAAAACGGA-GAG---CCGCAGAA---TGTGGCCA------------A-----CAATACGTTG-----AGCAGCA----TTTTGGCCACACCGCCTGAATCGCCACCAGC----------AGCA----------------GTGGCTGCAACATCTGCT------------------GCAAGTGG------AGGAGCCGCAACA---------------------------------------------------------------------------------------------------GCAACAGG-----------------AGCAA----------CGG---C-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAGCAG-------------------------------C---AGTAGCGGCAATTGTAGTCGCCTTCAGCAATTGATATCGACGCCACCAG------------TATTATTGCGC--AGATCATCGCTGCAGCAACAA----------------------------------------CAAC------AACAACAGCA-ASizeHit CountTotal NormTotal
No Reads
dp5
AGTGTA-GTGTGTCGC------------ACGCGCGACTGTGTGTGTGTGAATAATGAAGAAG---AAGCAG---------------------------------------------------AAA------CAACAGCA-GCAGCAGAGGCAGAGGCAGCAGCAGGTGCA------------------GCAGCAGCAGCAGCATCAGCATCAGCAG------------------------------------------------------------------------------------------------CAGAGGCAGG-----------------GCAAGGCGCCATCTG---AGGCAGAGTCGGA-------------------------------------------GACAGA-G-CG--------TTGCAACAATTCGCGTCGCAGTAGCGCC-GCCAGCAACAACAACAAATA-GCAAAAACTGAG----CAGCGTTCGGCAAAGC---------------------------------------------------------------------------GCAA-------------------------------CAACAAT------------TACAATTGCAA-----CC---------AAATCGGCAACAAAATCA------------ACAACAAACAT-CAATACAAC------AACAGCGGCA-ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................CAACAGCA-GCAGCAGAGGCAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2241.0040000021001
...................................................................................................................................CAACAGCA-GCAGCAGAGGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.2020100000001
..................................................................AGCAG---------------------------------------------------AAA------CAACAGCA-.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16140.0710000000100
........................................................................................................................................................................CA------------------GCAGCAGCAGCAGCATCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.......................................................................................................................................................................GCA------------------GCAGCAGCAGCAGCATCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
........................................................................................................................................................................CA------------------GCAGCAGCAGCAGCATCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
.........................................................................................................................................................................A------------------GCAGCAGCAGCAGCATCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
droPer2
GTAATG-GCTCCGCAACAGCA-GGT---TCCC------------ATG------------CAA---TTACAA---------------------------------------------------GTA------CAAATGCAGGTACCTACATCTGTAGCCCCAACAA-TGCA------------------GCAGCAGC---------------AGCCGTACCAACAGGGCCAGCAGATGGCCCCTCCAAGTGGCCAAATGGCACTTGGTGAGG------------------------------------------TTCAACAGC-----------------AGCAG----------CCG---C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACAGCAACATGCTACATTTGCGACAGTCTCCG-TG---------C-------------AGCAACCACAATTTATGCAGCCGATACAAC------------TATCATTGCCC--T---------TGGA------GCAACAATTACA------------ACAGCTCCTGCTCA-GTCAGC------AGCAGCAGCA-GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................CAGCAGATGGCCCCTCCAAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCA-GTCAGC------AGCAGCAGC...2020.501001000
droWil2
ATGGCA-GCAACAACAACAGC-AA-----------------------------------------CAACAACTGC-----AGCAGCAACAATTGCAGCAA-------------------------------------CA-AC------AGCAACAGCAGCAACAACAGCAGCAACAACAACAGCAGCAGCAACAGC------AGCA---------------------------------------------------------------------------------------------T------------CAGCAACAGCAAC-----AGCAGCAGCG-AATGCAACAGCAA---CAGCAACAGCAGC-------------------------------------------AACAATTG-CA----------------------------GCAACAAC-AACAACA------------------------------------------------------------------------GCAGCAG-------CAACAACAGCAACAGCAACAACAACAG----------------------CAGCAG----CAACAGCAACAACAGCAG---CAGCAGC--AGCAA--------------CTGCAACAACAGCAGCAGCAACAGCAA------CAACAA---------C-AACATCAGC------AGCAACAGCA-ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................AACAGC------AGCA---------------------------------------------------------------------------------------------T------------CAGCAACAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2140.25100010
................................................................................................................................................................................................................................................................................................................................................................................................................................AATTG-CA----------------------------GCAACAAC-AACAACA------------------------------------------------------------------------GC.....................................................................................................................................................................................................24100.20202000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA------------------------------------------------------------------------GCAGCAG-------CAACA....................................................................................................................................................................................19200.20400040
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAC-AACAACA------------------------------------------------------------------------GCAGCA.................................................................................................................................................................................................20200.20400040
......................................................................................AACAATTGCAGCAA-------------------------------------CA-AC------AG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.15303000
.......................................................................................................................................................................GCAGCAACAACAACAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.15300030
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------C-AACATCAGC------AGCAACA.....19200.10200020
................................................................................................................................................................................................................................................................................................................................................................................................................................AATTG-CA----------------------------GCAACAAC-AACAACA------------------------------------------------------------------------G......................................................................................................................................................................................................23100.10101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AACAATTG-CA----------------------------GCAACAAC-AACAACA------------------------------------------------------------------------GC.....................................................................................................................................................................................................27100.10101000
..................................................................................................AA-------------------------------------CA-AC------AGCAACAGCAGCAACAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
.................................................................CAACAACTGC-----AGCAGCAACAATTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAACAACAACAG----------------------CAGCA...................................................................................................................................25200.10202000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAGCAGCAGCA.........................................................18200.10200020
...............................................................................................AGCAA-------------------------------------CA-AC------AGCAACAGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10202000
............................................................................................TGCAGCAA-------------------------------------CA-AC------AGCAACAGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
......................................................................................AACAATTGCAGCAA-------------------------------------CA-AC------AGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200020
................................................................................................................................................................................................................................................................................................................................................................................................................................AATTG-CA----------------------------GCAACAAC-AACA..................................................................................................................................................................................................................................................................................19130.08100010
.............................................................................................................................................................................................................................................................................................................................................................AGCAA---CAGCAACAGCAGC-------------------------------------------AACAATT...............................................................................................................................................................................................................................................................................................................................25160.06100010
.......................................................................................................................................................................................................................................................................................................................................................TGCAACAGCAA---CAGCAACAGCAGC-------------------------------------------......................................................................................................................................................................................................................................................................................................................................24170.06101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---CAGCAGC--AGCAA--------------CTGCA........................................................................22170.06101000
..........................................................................................................................................................................................................AGCA---------------------------------------------------------------------------------------------T------------CAGCAACAGCAAC-----AGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................23170.06101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA---------C-AACATCAGC------AGCAACAGC...23180.06100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------CAACAA---------C-AACATCAGC------AGCAAC......24190.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------CAACAA---------C-AACATCAGC------AGCAACA.....25190.05101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC-AACAACA------------------------------------------------------------------------GCAGCAG-------CAA......................................................................................................................................................................................21200.05101000
.........................................................................................................................................................................................................................................................................................................................AGCAACAGCAAC-----AGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
.TGGCA-GCAACAACAACAGC-AA-----------------------------------------CAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAG----------------------CAGCAG----CAACAGCA......................................................................................................................22200.05101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAA------CAACAA---------C-AACATCAGC------............25200.05101000
.TGGCA-GCAACAACAACAGC-AA-----------------------------------------CAACAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA---------C-AACATCAGC------AGCAAC......22200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAAC-AACAACA------------------------------------------------------------------------GCAGCAG-------CA.......................................................................................................................................................................................24200.05101000
..GGCA-GCAACAACAACAGC-AA-----------------------------------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
................ACAGC-AA-----------------------------------------CAACAACTGC-----AGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAC-AACAACA------------------------------------------------------------------------GCAGCAG-------C........................................................................................................................................................................................22200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAACAACAG----------------------CAGCAG----CA............................................................................................................................25200.05100010
...........................................................................................TTGCAGCAA-------------------------------------CA-AC------AGCAACAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.........AACAACAACAGC-AA-----------------------------------------CAACAACTGC-----...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.........AACAACAACAGC-AA-----------------------------------------CAACAACTGC-----AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAACAACAACAG----------------------C.......................................................................................................................................20200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------------------------------------------------------------------------GCAGCAG-------CAACAACAGCAACA...........................................................................................................................................................................25200.05100100
..................................................................................................................................................................CAACAGCAGCAACAACAACAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAACAGCAG---CAGCAG...................................................................................................24200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------C-AACATCAGC------AGCAAC......19200.05100010
...............................................................................................................................................................CAACAACAGCAGCAACAACAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
......................................................................................AACAATTGCAGCAA-------------------------------------CA-AC------AGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.................................................................CAACAACTGC-----AGCAGCAACAATTGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
..................................................................AACAACTGC-----AGCAGCAACAATTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGCAACA......................................................20200.05100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAG----------------------CAGCAG----CAA...........................................................................................................................19200.05100010
......................................................................................................................................................CAACAGCAGCAACAACAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG----CAACAGCAACAACAGCAG---CAGC.....................................................................................................26200.05101000
............................................................................................TGCAGCAA-------------------------------------CA-AC------AGCAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.....................................................................................CAACAATTGCAGCAA-------------------------------------CA-AC------AGCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
..................................................................AACAACTGC-----AGCAGCAACAATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...........................................................................................TTGCAGCAA-------------------------------------CA-AC------AGCAACAGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG----------------------CAGCAG----CAACAGCAACAA..................................................................................................................21200.05100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAG----------------------CAGCAG----CAA...........................................................................................................................20200.05100001
.........................................................................................AATTGCAGCAA-------------------------------------CA-AC------AGCAACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAG----------------------CAGCAG----CAACA.........................................................................................................................21200.05100010
......................AA-----------------------------------------CAACAACTGC-----AGCAGCAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
............AACAACAGC-AA-----------------------------------------CAACAACTGC-----AG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.............................................................................................................................................................................ACAACAACAGCAGCAGCAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................AACAATTG-CA----------------------------GCAACAAC-AACAG.................................................................................................................................................................................................................................................................................23200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAG----------------------CAGCAG----CAACAG........................................................................................................................22200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAGC....................................................18200.05100010
..................AGC-AA-----------------------------------------CAACAACTGC-----AGCAGCAACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-AACAACA------------------------------------------------------------------------GCAGCAG-------CAACAACA.................................................................................................................................................................................23200.05100010
..............CAACAGC-AA-----------------------------------------CAACAACTGC-----AG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA------------------------------------------------------------------------GCAGCAG-------CAACAACA.................................................................................................................................................................................22200.05100010
......................................................................................AACAATTGCAGCAA-------------------------------------CA-AC------AGCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.................................................................................................CAA-------------------------------------CA-AC------AGCAACAGCAGCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
.TGGCA-GCAACAACAACAGC-AA-----------------------------------------CAACAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
......................................................................................................................................................................AGCAGCAACAACAACAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------CAACAA---------C-AACATCAGC------AGC.........22200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG----CAACAGCAACAACAGCAG---.........................................................................................................24200.05100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAGCAACAGC....................................................21200.05101000
....................................................................................................................................................................ACAGCAGCAACAACAACAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAACAACAG----------------------CAGCA...................................................................................................................................22200.05101000
...........CAACAACAGC-AA-----------------------------------------CAACAACTGC-----AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.....A-GCAACAACAACAGC-AA-----------------------------------------CAACAACTGC-----AG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05101000
...............................................................................................................................................................................AACAACAGCAGCAGCAACAGC------A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
......................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGC-------------------------------------------AACAATTG-.............................................................................................................................................................................................................................................................................................................................20200.05101000
......................................................................................AACAATTGCAGCAA-------------------------------------CA-AC------AGCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
...............AACAGC-AA-----------------------------------------CAACAACTGC-----AGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
..........................................................................................................................................................................................................................................................................................................................................................AACAGCAA---CAGCAACAGCAGC-------------------------------------------......................................................................................................................................................................................................................................................................................................................................21200.05100001
............................................................................................TGCAGCAA-------------------------------------CA-AC------AGCAACAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.........AACAACAACAGC-AA-----------------------------------------CAACAACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..GGCA-GCAACAACAACAGC-AA-----------------------------------------CAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
droVir3
ACAACA-ACAACAACAACGGCTAAG---CCGCACAC---AA------------------------CAATAAGCACAACAG------------------------------------------CAACAACTGCAACCACA-ACAACAACAACAGCAGCAGCAACATCAACA------------------GCAGCAGC---AGCAGTAGCAGCAACAA------------------------------------------------------------------------------------------------TTGCT-----------------------------------------------------------TCCAGCACAGTGCATCCATTTTTAATGTCA-----------------------------------------------------------CC-------------GTTCGACAAATTGCCCTTCA-TGGACACC--AGCTATGAGGTAAGACCACACCAGCAGCAGCAGCAG-------------------------------C---AGCAGCAACAGTTGCAGCTGTTAGCCG--AGCAACAGCGACCGCAGCAA---TTTCATCATTATCAGCACGCGCCG--------------AGCAGCAGCAGCAG--------------------------CACAACAAC------AACAATGGCA-ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................ATCAACA------------------GCAGCAGC---AGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102000000000000000000000000100000000000000000000000000000000000001
.............................................................................................................................................CAACAACAACAGCAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102002000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................AACATCAACA------------------GCAGCAGC---A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102000000000000000010000000000000000010000000000000000000000000000
................................................................................................................................................................AACATCAACA------------------GCAGCAGC---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.102000000000000000000000000000000001000000000000000000000000001000
.......................................................................................................................................CACA-ACAACAACAACAGCAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.101001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................ACAACAGCAGCAGCAACATCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.081001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................CAGCAACATCAACA------------------GCAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.071000000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................CAACCACA-ACAACAACAACAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22150.071000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................AGCAGCAACATCAACA------------------GCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.061001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................AGCAGCAACATCAACA------------------GCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20160.061001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCG--------------AGCAGCAGCAGCAG--------------------------C..........................19160.061000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................GCAGCAACATCAACA------------------GCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21170.061000000000000000000000000000000001000000000000000000000000000000
...................................................................................................................................................................................................C---AGCAGTAGCAGCAACAA------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................18190.051000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................CACA-ACAACAACAACAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22190.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAG-------------------------------C---AGCAGCAACAGTT................................................................................................................................................25200.051000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................CAACATCAACA------------------GCAGCAGC---AG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................GCAGCAACATCAACA------------------GCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................ACAACAGCAGCAGCAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000000000000000000000000000000100
...............................................................................................................................................................................................GCAGC---AGCAGTAGCAGCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000100000000000000000000000000000000000000000000000000000000
............................................................................................................................................ACAACAACAACAGCAGCAGCAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................CAACAGCAGCAGCAACATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................GCAGCAGC---AGCAGTAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAG-------------------------------C---AGCAGCAACAG..................................................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG-------------------------------C---AGCAGCAACAGTTGC..............................................................................................................................................19200.051010000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................A-ACAACAACAACAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................GCAACATCAACA------------------GCAGCAGC---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCAGCAGCAGCAGCAG-------------------------------C---.............................................................................................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................A------------------GCAGCAGC---AGCAGTAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................CATCAACA------------------GCAGCAGC---AGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................CAACATCAACA------------------GCAGCAGC---AGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAG-------------------------------C---AGCAGCAACAGTTG...............................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................AACATCAACA------------------GCAGCAGC---AGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG-------------------------------C---AGCAGCAACAGTT................................................................................................................................................18200.051000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................CAACAACAGCAGCAGCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000001000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCAGCAGCAGCAGCAG-------------------------------C---A............................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................ACCACA-ACAACAACAACAGCAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000000000000000000000000000000100
..............................................................................................................................................................GCAACATCAACA------------------GCAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000010000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG-------------------------------C---AGCAGCAACAGTTG...............................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................CAGCAACATCAACA------------------GCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000001000000000000000000000000000
...............................................................................................................................................ACAACAACAGCAGCAGCAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCAGCAGCAGCAG-------------------------------C---A............................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................CAACATCAACA------------------GCAGCAGC---A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAG-------------------------------C---AGCAGCA......................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................AACAACAACAGCAGCAGCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................CATCAACA------------------GCAGCAGC---AGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................CA------------------GCAGCAGC---AGCAGTAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................AACATCAACA------------------GCAGCAGC---AGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000001000000000000000000000000000
...............................................................................................................................................ACAACAACAGCAGCAGCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAG-------------------------------C---AGCAGCAAC....................................................................................................................................................21200.051000000000000000000000000000000100000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAG-------------------------------C---AGCAGCAACAGTT................................................................................................................................................23200.051000000000000000000000000000000001000000000000000000000000000000
.........................................................................................................................................CA-ACAACAACAACAGCAGCAGCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000001000000000000000000000000000000000
droMoj3
GCAGCA-GCAGCAACAGCAGC-AA-----------------------------------CAG---CAGCAA---------------------------------------------------CAG------CAGCAGCA-GCAGCAACAGCAGCAGCAGCAACAACAGCA------------------GCAGCAAC------AACATCAGCAGCA---------------------------------------------------------------------------GCAGCAACAT------------CATCATCAGCAGC-----AGCAGCA----------ACATCAGCAGCAGCAGCAGCAGC-------------------------------------AGTGGCATCAGCAG-CA----------------------------GCAGCAAC-ATCAGCAGCAGCAG-------------------------------------------------------------------------------CAGCAACATCAGCAGCAGCAGCAG---------CAGCAG--------------------CAGCAGCAGCAGCAGCAG---TGGCA--------TCAGCAG--CAGCAGCAGCAGCAACAGCAGCAGCAGCAACA------------G---------T-GGCAACAGC------AGCAACAGCATASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................AACAT------------CATCATCAGCAGC-----AGCAGCA----------A.......................................................................................................................................................................................................................................................................................................................................................................................................2620.501000001
........................................................................................................................................................................................................................................................................................................................CATCATCAGCAGC-----AGCAGCA----------ACATCA..................................................................................................................................................................................................................................................................................................................................................................................................2620.501100000
.........................................................................................................................................................................................................................................................................................................................ATCATCAGCAGC-----AGCAGCA----------ACAT....................................................................................................................................................................................................................................................................................................................................................................................................2330.331000010
.............................................................................................................................................................................................................................................................................................................................TCAGCAGC-----AGCAGCA----------ACATCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................2430.331000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAG-CA----------------------------GCAGCAAC-ATCAGCA...............................................................................................................................................................................................................................................................................2430.331000010
.........................................................................................................................................................................A------------------GCAGCAAC------AACATCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.292200000
.................CAGC-AA-----------------------------------CAG---CAGCAA---------------------------------------------------CAG------CAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.255000050
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAACAGCAGC.............................................................21200.153300000
.......................................................................................................................................................AGCAGCAGCAACAACAGCA------------------GCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.153300000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAACA------------G---------T-GGC........................2090.111000001
.....................................................................AA---------------------------------------------------CAG------CAGCAGCA-GCAGCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000020
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG--------------------CAGCAGCAGCAGCAGCAG---.........................................................................................................22200.102200000
.................................................................................................................................................................ACAACAGCA------------------GCAGCAAC------AACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102200000
.......GCAGCAACAGCAGC-AA-----------------------------------CAG---CAGCAA---------------------------------------------------C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102000002
...............................................................................................................................................................CAACAACAGCA------------------GCAGCAAC------AAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102200000
............................................................................................................................G------CAGCAGCA-GCAGCAACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102200000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---------CAGCAG--------------------CAGCAGCAG.....................................................................................................................20200.102200000
............................................................AG---CAGCAA---------------------------------------------------CAG------CAGCAGCA-GC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000020
...............................................................................................................................................................................................GCAAC------AACATCAGCAGCA---------------------------------------------------------------------------GC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................20130.081010000
................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG-CA----------------------------GCAGCAAC-ATCAGCAGCA............................................................................................................................................................................................................................................................................25150.071100000
...............................................................................................................................................................................................................................................................................................................................AGCAGC-----AGCAGCA----------ACATCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................25150.071100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAG-------------------------------------------------------------------------------CAGCAACATCAGCAGCA........................................................................................................................................................................25150.071100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAG-------------------------------------------------------------------------------CAGCAACATCAGCAGC.........................................................................................................................................................................24160.061000001
................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG-CA----------------------------GCAGCAAC-ATCAGCAGC.............................................................................................................................................................................................................................................................................24160.061000001
...............................................................................................................................................................................................................................................................................................................................AGCAGC-----AGCAGCA----------ACATCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................24160.061000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAG-------------------------------------------------------------------------------CAGCAACATCAGCA...........................................................................................................................................................................24170.061100000
............................................................................................................................................GCAGCAACAGCAGCAGCAGCAACAACAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29180.061000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGCAGCAG-------------------------------------------------------------------------------CAGCAAC..................................................................................................................................................................................21200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------TCAGCAG--CAGCAGCAGCAGCAAC...................................................................24200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG--------------------CAGCAGCAGCAGCAGCAG---T........................................................................................................23200.051100000
......................AA-----------------------------------CAG---CAGCAA---------------------------------------------------CAG------CAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000
....CA-GCAGCAACAGCAGC-AA-----------------------------------CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
...............................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGCAGC-------------------------------------AGTGGC......................................................................................................................................................................................................................................................................................................................................25200.051010000
...................................................................................................................................................................................................C------AACATCAGCAGCA---------------------------------------------------------------------------GCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACATCAGCAGCAGCAGCAG---------........................................................................................................................................................23200.051000001
............................................................AG---CAGCAA---------------------------------------------------CAG------CAGCAGCA-GCAGCAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051100000
....................................................................................................................................AGCAGCA-GCAGCAACAGCAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
.................................................................................................................................................................................................AAC------AACATCAGCAGCA---------------------------------------------------------------------------GCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
.................................................................................................................................................AACAGCAGCAGCAGCAACAACAGCA------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
..AGCA-GCAGCAACAGCAGC-AA-----------------------------------CAG---C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
........................................................................................................................................................GCAGCAGCAACAACAGCA------------------G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG--------------------CAGCAGCAGCAGCAGCAG---TGGC.....................................................................................................25200.051010000
.......................................................................................................................................................AGCAGCAGCAACAACAGCA------------------GCAGCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAGCAGCAA.....................................................19200.051010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC-ATCAGCAGCAGCAG-------------------------------------------------------------------------------CAGC.....................................................................................................................................................................................22200.051000001
.............................................................................................................................................................................................................................................................................................................................................AGCA----------ACATCAGCAGCAGCAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................23200.051000001
...................................................................................................................................................................................................................................................................................................................................GC-----AGCAGCA----------ACATCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------------------------------------------------------------------------CAGCAACATCAGCAGCAGCAGC...................................................................................................................................................................23200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA--------TCAGCAG--CAGCAGCAGC.........................................................................20200.051000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATCAGCAGCAGCAGCAG---------C.......................................................................................................................................................22200.051000001
.................................................................................................................................................AACAGCAGCAGCAGCAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
.............................................................................................................................................................................................................................................................................................................................................AGCA----------ACATCAGCAGCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................25200.051000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAAC-ATCAGCAGCAGCAG-------------------------------------------------------------------------------C........................................................................................................................................................................................23200.051100000
.........................................................................................................................................................................................................................................................................................................................ATCATCAGCAGC-----AGCAGCA----------........................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
.................CAGC-AA-----------------------------------CAG---CAGCAA---------------------------------------------------CAG------CAGCAGCA-G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA--------TCAGCAG--CAGCAGCAGCAGCA.....................................................................24200.051010000
...............................................................................................................................................................................................................................................................................................................................................CA----------ACATCAGCAGCAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................22200.051000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAGCAGCAGCAGCAACA------------.......................................27200.051000010
......................................................................A---------------------------------------------------CAG------CAGCAGCA-GCAGCAACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
............................................................................................................................G------CAGCAGCA-GCAGCAACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC-ATCAGCAGCAGCAG-------------------------------------------------------------------------------CAG......................................................................................................................................................................................23200.051000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC-ATCAGCAGCAGCAG-------------------------------------------------------------------------------CAGCA....................................................................................................................................................................................25200.051000010
...........................................................................................................................................................................................................................................................................................................................................GCAGCA----------ACATCAGCAGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................G-CA----------------------------GCAGCAAC-ATCAGCAGC.............................................................................................................................................................................................................................................................................20200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG-------------------------------------------------------------------------------CAGCAACATCAGCAGC.........................................................................................................................................................................20200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACATCAGCAGCAGCAGCAG---------CA......................................................................................................................................................25200.051000010
..................................................................AGCAA---------------------------------------------------CAG------CAGCAGCA-GCAGCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
......................AA-----------------------------------CAG---CAGCAA---------------------------------------------------CAG------CAGCAGCA-GCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------TCAGCAG--CAGCAGCAGCAGCAACA..................................................................25200.051100000
droGri2
TCAGCA-GCAGCAGCATCAG---------------------------------------------CAGCAG---------------------------------------------------CAG------CATCAGCA-GCAGCAGCATCAGCAGCAGCAGCATCAGCA------------------GCAGCAGC------ATCAGCAGCAGCA---------------------------------------------------------------------------GCATCAGCAG------------CAGCAGCAGCAGC-----AGCGTCA----------ACATCAGCAGCAGCAGCAGCAGC-------------------------------------AGTTAAAACAACAG-CA----------------------------GCAGCAAA-AACAGCAGCAGCAG-------------------------------------------------------------------------------CTAAAACAGCAACAGCATCAGCAGCAGCAGCAGCATCAG-----------------------------CAGCAGCAG---CAG--------CAGCAGCTA--AAACAGCAACAGCATCAGCAGCAGCAGCAGCA------------TC----------AGCAGCAGC------AGCAGCAGCA-GSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................ATCAGCAGCAGCAGCATCAGCA------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05110
....................................................................................................................................ATCAGCA-GCAGCAGCATCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05110
..........................................................................................................................................................................................................ATCAGCAGCAGCA---------------------------------------------------------------------------GCATCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05110
...................................................................................................................................................................ATCAGCA------------------GCAGCAGC------ATCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05110
...............ATCAG---------------------------------------------CAGCAG---------------------------------------------------CAG------CATCAGCA-.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05110
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGCAGCAGCAGCA------------TC----------A..........................22200.05110
...........................................................................................................................................................................................................................................................................................................G------------CAGCAGCAGCAGC-----AGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................18200.05110

Generated: 05/18/2015 at 09:52 AM