ID:

dsi_30202

 Coordinate:

x:10693892-10694041 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.6 -25.5 -25.3

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CGACTTTCAGATGGTGAACGCAATATAGAATCAAATCAAGTGAACGAAAAGTAAGCAAATAAACGATCTGAGTTTTTTTTTGTGTTGGTGTTGTTGTGTTGTGACGAGGAGAGTACGACATTTCGATGATAGTCGCATTGCAATATAAAGTGCAATATAAATGCCATAGAACCGATTGTGAACGAGGAGCCATTGAGATGTGAAATGTGAAAATCGCAAAGAAATCGAGAGAAAACGCACACGTCAATGT
******************************************************************(((.(((..((((((((((((((.((((.(((((((.((.......)))))))))..((((....)))).((((((........)))))).........)))).)))))).....))))))))..))).)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 GSM343915
embryo
....................................................................................TTTGTGTTGTTGTGTTGTGACAAGA............................................................................................................................................. 25 3 1 11.00 11 0 7 4 0 0 0 0
..................................................................TCTGAGTTTTTTTTTGTGTTGGTGT............................................................................................................................................................... 25 0 1 5.00 5 3 2 0 0 0 0 0
...........................................................................................................................................................TATAAATGCTATAGAACCGATTGTGAA.................................................................... 27 1 1 3.00 3 3 0 0 0 0 0 0
.................................................................................................................................................................TGCTATAGAACCGATTGTGAACGAGG............................................................... 26 1 1 3.00 3 2 1 0 0 0 0 0
................................................................................................................................................................................TGTGAACGAGGAGCCATTGAGATGTGA............................................... 27 0 1 2.00 2 2 0 0 0 0 0 0
.........................TAGAATCAAATCAAGTGAACGAAAAGTA..................................................................................................................................................................................................... 28 0 1 2.00 2 0 2 0 0 0 0 0
...........................................................................................................................................................TATAAATGCTATAGAACCGATTGTG...................................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................................................................TATAAATGCTATAGAACCGATTGTGA..................................................................... 26 1 1 2.00 2 2 0 0 0 0 0 0
..................................................................................................................................................................GCTATAGAACCGATTGTGAACGAGGA.............................................................. 26 1 1 2.00 2 2 0 0 0 0 0 0
...............................................................................................................................................................................TTGTGAACGAGGAGCCATTGAGATG.................................................. 25 0 1 2.00 2 2 0 0 0 0 0 0
.................................................................................................................................................................TGCTATAGAACCGATTGTGAACGAGGA.............................................................. 27 1 1 2.00 2 0 2 0 0 0 0 0
....................................................................................................................................................................CATAGAACCGATTGTGAACG.................................................................. 20 0 1 1.00 1 0 0 0 1 0 0 0
...............................................................................................................AGTACGACATTTCGATGATAGT..................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1
..................................................................TCTGAGTTTTTTTTTGTGTTGGTGTTGT............................................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0
.................................................................................................................................................................TGCTATAGAACCGATTGTGAACGAG................................................................ 25 1 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................................................................ATGCCATAGAACCGATTGTGAACGAGGA.............................................................. 28 0 1 1.00 1 0 0 0 0 0 1 0
..................................................................TCTGAGTTTTTTTTTGTGTTGGT................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0
..............TGAACGCAATATAGAATCAAATCAAG.................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0
.................................................................................................................................................................TGCTATAGAACCGATCGTGAACGAGG............................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................TATAGAACCGATTGTGAACGAGGAGCCA.......................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................TTGTGAACGAGGAGCCATTGAGA.................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................CTATCTGAGTTTTTTTTTGTGTTGGT................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................................TTGTGTTGGTGTTGTTGTGTTGTGA.................................................................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0
.................................................................................................................................................................TTCTATAGAACCGATTGTGAACGAGGA.............................................................. 27 2 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................AATGCTATAGAACCGATTGTGAACGAGG............................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................................................TTCGATGATAGTCGCATTGCAATA......................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................TGCTATAGAACCGATTGAGAACGAGGA.............................................................. 27 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................................TAAATGCTATAGAACCGATTGTGAA.................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................TCTGAGTTTTTTTTTGTGTTGGTGTT.............................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................TTGGTGTTGTTGTGTTGT.................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0
..............................................................................................................................................................AAATGCTATAGAACCGATTGTGAACGAGG............................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................TATAGAACCGATTGTGAACGAGGAGC............................................................ 26 1 1 1.00 1 0 1 0 0 0 0 0
.................................................................................................................................................................TGCTATAGAACCGATTGTGAACGAGGAA............................................................. 28 2 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................TGTGAACGAGGACACATGGAGA.................................................... 22 3 2 0.50 1 0 0 0 0 1 0 0
.................................................................................................................................................................TTCAATAGAACCGATCGTGAA.................................................................... 21 3 6 0.17 1 0 1 0 0 0 0 0
.................................................................................................................................................................TTCAATAGAACCGATCGTGA..................................................................... 20 3 8 0.13 1 0 1 0 0 0 0 0
..............................................................................................TGTGATGTGACGGGGAGAC......................................................................................................................................... 19 3 10 0.10 1 0 0 0 1 0 0 0
.........................................................................................................................................................................................GGAGCCATTGAAACGTGA............................................... 18 2 10 0.10 1 0 0 0 0 1 0 0
.......CAGATGGTAGACGCAAT.................................................................................................................................................................................................................................. 17 2 11 0.09 1 0 0 0 1 0 0 0
..................................................................TCTGAGTTCTTCTTTGTGGT.................................................................................................................................................................... 20 3 13 0.08 1 0 1 0 0 0 0 0
...............................................................CGATCCGAGCTTTTTTTT......................................................................................................................................................................... 18 2 16 0.06 1 0 0 1 0 0 0 0
..............................................................................................TGTGGTGTGACGTGGA............................................................................................................................................ 16 2 20 0.05 1 0 0 0 1 0 0 0

Anti-sense strand reads

GCTGAAAGTCTACCACTTGCGTTATATCTTAGTTTAGTTCACTTGCTTTTCATTCGTTTATTTGCTAGACTCAAAAAAAAACACAACCACAACAACACAACACTGCTCCTCTCATGCTGTAAAGCTACTATCAGCGTAACGTTATATTTCACGTTATATTTACGGTATCTTGGCTAACACTTGCTCCTCGGTAACTCTACACTTTACACTTTTAGCGTTTCTTTAGCTCTCTTTTGCGTGTGCAGTTACA
**************************************************(((.(((..((((((((((((((.((((.(((((((.((.......)))))))))..((((....)))).((((((........)))))).........)))).)))))).....))))))))..))).)))..****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
.......................................................................................................................................................................................................................CGTTTCTTGATCTCTCTTTTGT............. 22 3 4 0.50 2 2 0 0 0
.....................................................TCATTTCTTTGCTAGTCTCA................................................................................................................................................................................. 20 3 8 0.38 3 0 3 0 0
.................................................................................................................................................................ACGGTATCTTAGCTACCA....................................................................... 18 2 4 0.25 1 0 0 1 0
..................................................................................................ACCACTGCTCCTCTCCTGA..................................................................................................................................... 19 3 13 0.15 2 0 0 0 2
...................................................................................................CCACTGCTCCTCTCCTG...................................................................................................................................... 17 2 13 0.08 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:10693842-10694091 + dsi_30202 CGACTTTCAGAT-GGTGAACGCAAT---ATAGAA--------TCAAA------TC-AAGTG----AAC-GAAAA--------------GTAAG-----CAAA-TAAACGATC--------------TGAGTTTTTTTTTGTG-TTGGTGTTGTTGTGTTGTGACGAGG------------------------------------------------AGA-----GTACGA-------------------------CA--------------------------------------------------------TTTCGATGATAGTC---GCATTGCAATATAAAGTGCAATATAAATGCCATAGAACCGATTGTGAAC--GAG-G----------------AGCCATTGAGATGTGAAATGTGAAAA-TC-GCAAAGAAATC----------------------------------------GA------G-------------------------AG-AAAACGCACACGTCAATGT
droSec2 scaffold_15:1946503-1946749 + CGACTTTCAGAT-GGTGAACGCAAT---ATAGAA--------TCAAA------TC-AAGTG----AAC-GAAAA--------------GTAAG-----CAAA-TAAACGAT----------------GAGTTTTT-TTTGTG-TTGGTGTTGTTGTGTTGTGACGAGG------------------------------------------------AGA-----GTACGA-------------------------CA--------------------------------------------------------TTTCGATGATAGTC---GCATTGCAATATAAAGTGCAATATAAATGCTATAGAACCGATTGTGAAC--GAG-G----------------AGCCATTTAGATGTGAAATGTGAAAA-TC-GCAAAGAAATC----------------------------------------GA------C-------------------------AG-AAAACGCACACGTCAATGT
dm3 chrX:11267840-11268091 + CGACTTTCAGAT-GGTGAATGCAAT---ATAGAA--------TCAAA------TC-AAGTG----AAC-GCGAA--------------GTAAG-----CAAA-TAAACGATC--------------TGAGTTTTTTTTTGTG-TTGGTGTTGTTGTGTTGTGACGAGG------------------------------------------------AAA-----GTACGA-------------------------CA--------------------------------------------------------TTTCGATGATAGTC---GCATTGCAATATAAAGTGCAACATAAATGCTATAGAACCGAATGTGAATGTGAG-G----------------AGCCATTGAGCTGTGAAATGTGAAAA-TC-GCAAAGAAATC----------------------------------------GA------G-------------------------AG-AAAACGCACACGTCAATGT
droEre2 scaffold_4690:3886347-3886585 - CGACTTTCAGAT-GGTGAATGCAAT---ATAGAA--------TCAAA------TC-AAGTG----ACC-GAAAA--------------GTAAG-----AAAAGTAAACGATC--------------TGAGTTTTT-TTTGTG-TTGGTG---TTGTGTTGTGACGCAG------------------------------------------------AAA-----GTACGA-------------------------CA--------------------------------------------------------TTTCGATGATAGTC---GCATTGCAATATAAAGTGCAATATAAATGCTACAGAACCGAAAGTGAAC--GAG-G----------------AGCCATT-------GAAATGTGAAAT-TC-GCTAAGAAATC----------------------------------------GA------G-------------------------AG-A-AACGCACACGTCAATGT
droYak3 X:10885231-10885470 - CGACTTTCAGAT-GGTGAATGCAAT---ATAGAA--------TCAAA------TC-AAGTG----ACC-GAAAA--------------GTAAG------AAA-TAAACGATC--------------TGAGTTTTT-TTTGTG-TTGGTG-TGTTGTGTTGTGACGAAG------------------------------------------------AAA-----ATACGA-------------------------CA--------------------------------------------------------TTTCGATGATAGTC---GCATTGCAATATAAAGTGCAATATAAATGCTATAGAACCGAAAGTGAAC--AAG-G----------------AGCCATT-------GAAATGTGAAAT-TC-GCATAGAAATC----------------------------------------GA------G-------------------------AG-AAAACGCACACGTCAATGT
droEug1 scf7180000408176:431533-431791 + CGCCTTCTAGAT-GGTGGATGGAAT---ATAAAA--------TAAAAATATAACA-AAATA----AAC-AAAAAA---------AAAAG-AAGAAACAAAAA-AAAACGATT--------------GTAGTTTTTTCTTGTG-TTGGTG---TTGTGTTGTGAAGAAG-----------------------------------------AAGAAGAAGA-----GAACGA-------------------------CA--------------------------------------------------------TTTCGATGATAGCC---GAATTTC------GAGTGCAACATAAAAGCTATAGAACCGGAAGTAGAC--GAG-G----------------AGCCATT-------GAAATGTGAAAT-TC-GCTAAGAAATC----------------------------------------GA---CA-G-------------------------AGAAAAACGCACACGTCAATGT
droBia1 scf7180000301760:340752-340986 + CGCCCTCTAGAT-GGTGGATGGAATT--ATAGAG--------TAAAG------TA-AAGTG----AAC-CGAAT--------------AAAAG------GAA-AAGACGATC--------------TGTGTTTT--TTTGTG-TTAGTG---TTGTGTTGTGAAGCAG----------------------------------------------ATACA-----GAACGA-------------------------CA--------------------------------------------------------TTTCGATGAGAGCC---GAATCTC------AAGTGCAACGTGAAAGCCACAGAACCGGAAGTAGAC--GAG-G----------------AGCCACT-------GAAATGTGAAAT-TCCGCAAAGAAATC----------------------------------------GA------G-------------------------AG-GAAACGCACACGTCAATGT
droTak1 scf7180000415843:213223-213482 + CGCCTTCTAGAT-GGTGGATGGAATT--ATAGAA--------TAAAC------TAAAAGTG----AAC-AAAAAAATATTTTACAAAAG-AAG------AAA-AAAACGATC--------------AGAGTTTTT-TTTGTG-TTGGTG---TTGTGTTGTGAAGAAT-----------------------------------------AAGAAGAAGAAAGACGAAGGA-------------------------CA--------------------------------------------------------TTTCGATGACAGCC---GAATTTC------AAGTGCAATTTAAAAGCTATAGAACCGGAAGTAGAC--GAGTG----------------AGCCACT-------GAAATGTGAAAT-TC-GCCAAGAAATC----------------------------------------GA------G-------------------------AG-AAAACGCACACGTCAATGT
droEle1 scf7180000491193:466325-466555 - CGACTTCTAGAT-GTTGGATGGAAT---ATAGAA--------TAAAA------TA-AAGTG----AAT-CAAAA--------------AAGAG------AGA-AAAACGATT--------------AGAGTTTT--TTTGTG-TTGGTG---TTGTGTTGTGAAGAAG------------------------------------------------AAA-----GAACGA-------------------------CA--------------------------------------------------------TTTCGATGATAGCC---GAATTTT------AAGTGAAATATAAATGCTATAGAACCGGAAGTACAG--GAG-G----------------TGCCACT-------GAAATGTGAAAT-TC-ACAAAGAAATT----------------------------------------GA------A-------------------------AG-AAAACGCACACGTCAATGT
droRho1 scf7180000779986:258534-258756 + CGCCTTCTAGAT-GTTGGATGGAAT---ATAGAA--------TAA------------AGTG----AAT-CAAAA----------------AAG--------A-AAAACGATT--------------AGAGTTTTT-TTTGTG-TTGGTG---TTGTGTTGTGAAGAAA------------------------------------------------AGA-----GAACGA-------------------------CA--------------------------------------------------------TTTCGATGACAGCC---GAATTTC------AAGTGAAATATAAAAGCTATAGAACCGGAAGTAAAG--GAA-G----------------TGCCACT-------GAAATGTGAAAT-TC-GCAAAGAAATC----------------------------------------GA------G-------------------------AG-AAAACGCACACGTCAATGT
droFic1 scf7180000453872:62552-62780 + CGCCTTCTAGAT-GGTGGATGGAGT---ATTGAA--------TAACA------TA-AAGTG----AAT-AAAT------------------------------AAATCTATC--------------GAAGATC---TTTGTG-TTGGTG---TTGTGTTGTGAAGAAA----------------------------------------------GAAAA-----AAACTA-------------------------TA--------------------------------------------------------TTTCGATGAGAACC---GAATTTC------AAGTGCAATACAAGAGCTATAGGACCAGAAGTAGAG--AAC-G----------------GGCCACT-------GAAATGTAAAAT-TC-TCAAATAAATC----------------------------------------GAAATCGAA-------------------------AG-AAAACGCACACGTCAATGT
droKik1 scf7180000302798:223862-224198 + CGCCTTCTAGATTGGTGGCTGGAAA---ATACAAAAAAAGAACTAGA------TT-AATCAAATGCAATCAA------------------AAG-----GAAA-TAATCGATCTGAGAGTAATATTTTATTG---T-TTTGTTATTGTTG---TTGTGCTGTGCCAGTGTGTTGAAAGAGACATAAAATGAAAAATATAGAATAAAAATAAGGGAAAAGA-----GAGCGATCTACATACCATATATGTATGTACATA--------------------------------------------------------TATCGATGATAATACAAAAATTTC------AAGTGCAG------TGCTACAGAACCGAAAGCAGAA--AAA-GACCCAGCAGAAGCCACGGCCACT-------GAGATGTGAAAAATT-GAAAGGAAATC----------------------------------------GT-------------------------------------AACGCACACGTCAATGT
droAna3 scaffold_13047:1211317-1211333 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGCACACGTAACTGT
droBip1 scf7180000396575:187555-187915 + TACATTTTAGAT-GGTGAATGGAATTAAATGAAA--------TTCAA------TC-AAATG----CAA-GCCAA--------------GGATA--ACGAAAG-GATCCGATCGGAATTCCACACGTAACGGTT---TTCGTTTTTGTTG---TTGTGTTGTGCCAGTG------------------------------------------------TGT-----GTGTG--------------TGTGTATGTGTGTGTATTAAAGACAAGAAAAGGGATACTGATACTGTGTATATAGAGGATATATTAAAAATATCG--------C---CAATTTC------CAGTGCAGTCCAC-------T---------------------G----------TGCC--ACACACT-------AAAATGTGAAAT-TC-CCAAAAAAAAATAAAGAAAATAAATAAATAAATTAAAGAAATTATTAAACCCAAGCCGAAACGTAACGTAACGTAACGCAAAGTAAC-GTAACGCACACGTAAATGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGACTTTCAGAT-GGTGAACGCAAT---ATAGAA--------TCAAA------TC-AAGTG----AAC-GAAAA--------------GTAAG-----CAAA-TAAACGATC--------------TGAGTTTTTTTTTGTG-TTGGTGTTGTTGTGTTGTGACGAGG------------------------------------------------AGA-----GTACGA-------------------------CA--------------------------------------------------------TTTCGATGATAGTC---GCATTGCAATATAAAGTGCAATATAAATGCCATAGAACCGATTGTGAAC--GAG-G----------------AGCCATTGAGATGTGAAATGTGAAAA-TC-GCAAAGAAATC----------------------------------------GA------G-------------------------AG-AAAACGCACACGTCAATGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................TC--------------TGAGTTTTTTTTTGTG-TTGGTGT.....................................................................................................................................................................................................................................................................................................................................................................................................2515.00500000032000000000
....................................................................................................................................................................................................................................................................................................................................................................................TGTGAAC--GAG-G----------------AGCCATTGAGATGTGA.........................................................................................................................2712.00200000020000000000
.............................TAGAA--------TCAAA------TC-AAGTG----AAC-GAAAA--------------GTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000002000000000
...................................................................................................................................................................................................................................................................................................................................................................................TTGTGAAC--GAG-G----------------AGCCATTGAGATG............................................................................................................................2512.00200000020000000000
........................................................................................................................................................................................................................................................................................................................................................................CATAGAACCGATTGTGAAC--G.............................................................................................................................................................2011.00100000000001000000
..........................................................................................................................................................................................................................A-----GTACGA-------------------------CA--------------------------------------------------------TTTCGATGATAGT.....................................................................................................................................................................................................................2211.00100000000000100000
..............................................................................................................TC--------------TGAGTTTTTTTTTGTG-TTGGTGTTGT..................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................ATGCCATAGAACCGATTGTGAAC--GAG-G----------------A........................................................................................................................................2811.00101000000000000000
..............................................................................................................TC--------------TGAGTTTTTTTTTGTG-TTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000001000000000
...............TGAACGCAAT---ATAGAA--------TCAAA------TC-AAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................TTGTGAAC--GAG-G----------------AGCCATTGAGA..............................................................................................................................2311.00100000010000000000
.........................................................................................................................................TTGTG-TTGGTGTTGTTGTGTTGTGA........................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................TTCGATGATAGTC---GCATTGCAATA......................................................................................................................................................................................................2411.00100000010000000000
..............................................................................................................TC--------------TGAGTTTTTTTTTGTG-TTGGTGTT....................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
...............................................................................................................................................TTGGTGTTGTTGTGTTGT..........................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000100000000
droSec2
CGACTTTCAGAT-GGTGAACGCAAT---ATAGAA--------TCAAA------TC-AAGTG----AAC-GAAAA--------------GTAAG-----CAAA-TAAACGAT----------------GAGTTTTT-TTTGTG-TTGGTGTTGTTGTGTTGTGACGAGG------------------------------------------------AGA-----GTACGA-------------------------CA--------------------------------------------------------TTTCGATGATAGTC---GCATTGCAATATAAAGTGCAATATAAATGCTATAGAACCGATTGTGAAC--GAG-G----------------AGCCATTTAGATGTGAAATGTGAAAA-TC-GCAAAGAAATC----------------------------------------GA------C-------------------------AG-AAAACGCACACGTCAATGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
CGACTTTCAGAT-GGTGAATGCAAT---ATAGAA--------TCAAA------TC-AAGTG----AAC-GCGAA--------------GTAAG-----CAAA-TAAACGATC--------------TGAGTTTTTTTTTGTG-TTGGTGTTGTTGTGTTGTGACGAGG------------------------------------------------AAA-----GTACGA-------------------------CA--------------------------------------------------------TTTCGATGATAGTC---GCATTGCAATATAAAGTGCAACATAAATGCTATAGAACCGAATGTGAATGTGAG-G----------------AGCCATTGAGCTGTGAAATGTGAAAA-TC-GCAAAGAAATC----------------------------------------GA------G-------------------------AG-AAAACGCACACGTCAATGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................AATGCTATAGAACCGAATGTGAATGT..............................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGCAAT---ATAGAA--------TCAAA------TC-AAGTG----AA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TGTGTTGTGACGAGG------------------------------------------------AAA-----GTACGA-------------------------CA--------------------------------------------------------..................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
................................................................................................................................................................................................................................................................................................................................................................ATAAATGCTATAGAACCGAA.......................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................T---ATAGAA--------TCAAA------TC-AAGTG----AAC-GCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................GACGAGG------------------------------------------------AAA-----GTACGA-------------------------CA--------------------------------------------------------TTT...............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................GTGTTGTTGTGTTGTGACGA.....................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................GCTATAGAACCGAATGTGAAT................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GTGAG-G----------------AGCCATTGAGCTGTGAAATG.....................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................ATC--------------TGAGTTTTTTTTTGTG-TTGGTGTT....................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................TC-AAGTG----AAC-GCGAA--------------GTAAG-----CAAA-....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TTCGATGATAGTC---GCATTGCAATATAAAG.................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................GA-------------------------CA--------------------------------------------------------TTTCGATGATAGTC---GCA..............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................TTGTGACGAGG------------------------------------------------AAA-----GTACGA-------------------------CA--------------------------------------------------------TT................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................AATGTGAATGTGAG-G----------------AGCCATTGCC...............................................................................................................................2511.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TC--------------TGAGTTTTTTTTTGTG-TTGGTGTT....................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TCAGAT-GGTGAATGCAAT---ATAGAA--------TC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................GTTGTGACGAGG------------------------------------------------AAA-----GTA........................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TATAGAACCGAATGTGAATGTGAG-G----------------.........................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TTTCGATGATAGTC---GCATTGCAATA......................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CATTGAGCTGTGAAATGTGAAA................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................CA--------------------------------------------------------TTTCGATGATAGTC---GCATTGCAAT.......................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TGAGTTTTTTTTTGTG-TTGGTGT.....................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAAAA-TC-GCAAAGAAATC----------------------------------------GA------G-------------------------AG-A..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................GTGAATGTGAG-G----------------AGCCAT...................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TATAGAACCGAATGTGAATGTGAG-G----------------AGC......................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................TAAATGCTATAGAACCGAATGTGAAT................................................................................................................................................................2611.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................TAAG-----CAAA-TAAACGATC--------------TGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................TGTTGTTGTGTTGTGACGAGG------------------------------------------------AAA-----G..........................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................AAA------TC-AAGTG----AAC-GCGAA--------------GTAAG-----C........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................AGTGCAACATAAATGCTATAGAACC..........................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................ATC--------------TGAGTTTTTTTTTGTG-TTGGTG......................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCAAT---ATAGAA--------TCAAA------TC-AAGTG----AAC-......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TGTTGTGACGAGG------------------------------------------------AAA-----GTACGA-------------------------C...........................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAATC----------------------------------------GA------G-------------------------AG-AAAACGCACACG.......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................TC-AAGTG----AAC-GCGAA--------------GTAAG-----CAAA-TA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATC----------------------------------------GA------G-------------------------AG-AAAACG.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................TTTTTTTTGTG-TTGGTGTT....................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
........................T---ATAGAA--------TCAAA------TC-AAGTG----AAC-GCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TGTTGTTGTGTTGTGACGAGG------------------------------------------------AAA-----...........................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................TGTGTTGTGACGAGG------------------------------------------------AAA-----G..........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TGAGTTTTTTTTTGTG-TTGGTGTTGTATC...............................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TAGTC---GCATTGCAATATAAAGTGCAACA..........................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TGACGAGG------------------------------------------------AAA-----GTACGA-------------------------CA--------------------------------------------------------TTTCGAT...........................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................A-------------------------CA--------------------------------------------------------TTTCGATGATAGTC---GCATTGCAA........................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAAA-TC-GCAAAGAAATC----------------------------------------GA------G-------------------------AG-AA.................2711.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CCGAATGTGAATGTGAG-G----------------.........................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGAAATGTGAAAA-TC-GCAAAGA....................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TAAACGATC--------------TGAGTTTTTTTTTGTG-............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................CA--------------------------------------------------------TTTCGATGATAGTC---GCA..............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................TGTGTTGTGACGAGG------------------------------------------------ATC-----...........................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TTGTG-TTGGTGTTGTTGTGTGT...........................................................................................................................................................................................................................................................................................................................................................................................2270.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
droEre2
CGACTTTCAGAT-GGTGAATGCAAT---ATAGAA--------TCAAA------TC-AAGTG----ACC-GAAAA--------------GTAAG-----AAAAGTAAACGATC--------------TGAGTTTTT-TTTGTG-TTGGTG---TTGTGTTGTGACGCAG------------------------------------------------AAA-----GTACGA-------------------------CA--------------------------------------------------------TTTCGATGATAGTC---GCATTGCAATATAAAGTGCAATATAAATGCTACAGAACCGAAAGTGAAC--GAG-G----------------AGCCATT-------GAAATGTGAAAT-TC-GCTAAGAAATC----------------------------------------GA------G-------------------------AG-A-AACGCACACGTCAATGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................G-TTGGTG---TTGTGTTGTGAC.......................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
..............................................................................................................................................................................................................................................................................................................................................................................ACCGAAAGTGAAC--GAG-G----------------AGCCA....................................................................................................................................2211.0010000100
droYak3
CGACTTTCAGAT-GGTGAATGCAAT---ATAGAA--------TCAAA------TC-AAGTG----ACC-GAAAA--------------GTAAG------AAA-TAAACGATC--------------TGAGTTTTT-TTTGTG-TTGGTG-TGTTGTGTTGTGACGAAG------------------------------------------------AAA-----ATACGA-------------------------CA--------------------------------------------------------TTTCGATGATAGTC---GCATTGCAATATAAAGTGCAATATAAATGCTATAGAACCGAAAGTGAAC--AAG-G----------------AGCCATT-------GAAATGTGAAAT-TC-GCATAGAAATC----------------------------------------GA------G-------------------------AG-AAAACGCACACGTCAATGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
CGCCTTCTAGAT-GGTGGATGGAAT---ATAAAA--------TAAAAATATAACA-AAATA----AAC-AAAAAA---------AAAAG-AAGAAACAAAAA-AAAACGATT--------------GTAGTTTTTTCTTGTG-TTGGTG---TTGTGTTGTGAAGAAG-----------------------------------------AAGAAGAAGA-----GAACGA-------------------------CA--------------------------------------------------------TTTCGATGATAGCC---GAATTTC------GAGTGCAACATAAAAGCTATAGAACCGGAAGTAGAC--GAG-G----------------AGCCATT-------GAAATGTGAAAT-TC-GCTAAGAAATC----------------------------------------GA---CA-G-------------------------AGAAAAACGCACACGTCAATGTSizeHit CountTotal NormTotal
No Reads
droBia1
CGCCCTCTAGAT-GGTGGATGGAATT--ATAGAG--------TAAAG------TA-AAGTG----AAC-CGAAT--------------AAAAG------GAA-AAGACGATC--------------TGTGTTTT--TTTGTG-TTAGTG---TTGTGTTGTGAAGCAG----------------------------------------------ATACA-----GAACGA-------------------------CA--------------------------------------------------------TTTCGATGAGAGCC---GAATCTC------AAGTGCAACGTGAAAGCCACAGAACCGGAAGTAGAC--GAG-G----------------AGCCACT-------GAAATGTGAAAT-TCCGCAAAGAAATC----------------------------------------GA------G-------------------------AG-GAAACGCACACGTCAATGTSizeHit CountTotal NormTotal
No Reads
droTak1
CGCCTTCTAGAT-GGTGGATGGAATT--ATAGAA--------TAAAC------TAAAAGTG----AAC-AAAAAAATATTTTACAAAAG-AAG------AAA-AAAACGATC--------------AGAGTTTTT-TTTGTG-TTGGTG---TTGTGTTGTGAAGAAT-----------------------------------------AAGAAGAAGAAAGACGAAGGA-------------------------CA--------------------------------------------------------TTTCGATGACAGCC---GAATTTC------AAGTGCAATTTAAAAGCTATAGAACCGGAAGTAGAC--GAGTG----------------AGCCACT-------GAAATGTGAAAT-TC-GCCAAGAAATC----------------------------------------GA------G-------------------------AG-AAAACGCACACGTCAATGTSizeHit CountTotal NormTotal
No Reads
droEle1
CGACTTCTAGAT-GTTGGATGGAAT---ATAGAA--------TAAAA------TA-AAGTG----AAT-CAAAA--------------AAGAG------AGA-AAAACGATT--------------AGAGTTTT--TTTGTG-TTGGTG---TTGTGTTGTGAAGAAG------------------------------------------------AAA-----GAACGA-------------------------CA--------------------------------------------------------TTTCGATGATAGCC---GAATTTT------AAGTGAAATATAAATGCTATAGAACCGGAAGTACAG--GAG-G----------------TGCCACT-------GAAATGTGAAAT-TC-ACAAAGAAATT----------------------------------------GA------A-------------------------AG-AAAACGCACACGTCAATGTSizeHit CountTotal NormTotal
No Reads
droRho1
CGCCTTCTAGAT-GTTGGATGGAAT---ATAGAA--------TAA------------AGTG----AAT-CAAAA----------------AAG--------A-AAAACGATT--------------AGAGTTTTT-TTTGTG-TTGGTG---TTGTGTTGTGAAGAAA------------------------------------------------AGA-----GAACGA-------------------------CA--------------------------------------------------------TTTCGATGACAGCC---GAATTTC------AAGTGAAATATAAAAGCTATAGAACCGGAAGTAAAG--GAA-G----------------TGCCACT-------GAAATGTGAAAT-TC-GCAAAGAAATC----------------------------------------GA------G-------------------------AG-AAAACGCACACGTCAATGTSizeHit CountTotal NormTotal
No Reads
droFic1
CGCCTTCTAGAT-GGTGGATGGAGT---ATTGAA--------TAACA------TA-AAGTG----AAT-AAAT------------------------------AAATCTATC--------------GAAGATC---TTTGTG-TTGGTG---TTGTGTTGTGAAGAAA----------------------------------------------GAAAA-----AAACTA-------------------------TA--------------------------------------------------------TTTCGATGAGAACC---GAATTTC------AAGTGCAATACAAGAGCTATAGGACCAGAAGTAGAG--AAC-G----------------GGCCACT-------GAAATGTAAAAT-TC-TCAAATAAATC----------------------------------------GAAATCGAA-------------------------AG-AAAACGCACACGTCAATGTSizeHit CountTotal NormTotal
No Reads
droKik1
CGCCTTCTAGATTGGTGGCTGGAAA---ATACAAAAAAAGAACTAGA------TT-AATCAAATGCAATCAA------------------AAG-----GAAA-TAATCGATCTGAGAGTAATATTTTATTG---T-TTTGTTATTGTTG---TTGTGCTGTGCCAGTGTGTTGAAAGAGACATAAAATGAAAAATATAGAATAAAAATAAGGGAAAAGA-----GAGCGATCTACATACCATATATGTATGTACATA--------------------------------------------------------TATCGATGATAATACAAAAATTTC------AAGTGCAG------TGCTACAGAACCGAAAGCAGAA--AAA-GACCCAGCAGAAGCCACGGCCACT-------GAGATGTGAAAAATT-GAAAGGAAATC----------------------------------------GT-------------------------------------AACGCACACGTCAATGTSizeHit CountTotal NormTotal
No Reads
droAna3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGCACACGTAACTGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TACATTTTAGAT-GGTGAATGGAATTAAATGAAA--------TTCAA------TC-AAATG----CAA-GCCAA--------------GGATA--ACGAAAG-GATCCGATCGGAATTCCACACGTAACGGTT---TTCGTTTTTGTTG---TTGTGTTGTGCCAGTG------------------------------------------------TGT-----GTGTG--------------TGTGTATGTGTGTGTATTAAAGACAAGAAAAGGGATACTGATACTGTGTATATAGAGGATATATTAAAAATATCG--------C---CAATTTC------CAGTGCAGTCCAC-------T---------------------G----------TGCC--ACACACT-------AAAATGTGAAAT-TC-CCAAAAAAAAATAAAGAAAATAAATAAATAAATTAAAGAAATTATTAAACCCAAGCCGAAACGTAACGTAACGTAACGCAAAGTAAC-GTAACGCACACGTAAATGTSizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 07:32 PM