ID:dsi_30075 |
Coordinate:2r:5799976-5800035 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [2r_5799544_5799975_+]; CDS [2r_5799544_5799975_+]; CDS [2r_5800036_5800210_+]; exon [2r_5800036_5800210_+]; intron [2r_5799976_5800035_+]
No Repeatable elements found
| ##################################################------------------------------------------------------------################################################## ATTTACGACTTTCAGGGCGAAGCGGACACCAAAACCCTACTCTATCAGTGGTTGGTAGCGCAATATTTGTTTTGTTGATTCAACACTTCTAACGTTATGATTATCAAAAGTGTCTTGTTGAAGGAGGTCCCCATTCAGGCGTTGTACTCAGCCCTTGCCC **************************************************.(((((((((.(((.((.....(((((...))))).....)).))).)).)))))))...************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M024 male body |
SRR618934 dsim w501 ovaries |
M025 embryo |
SRR553485 Chicharo_3 day-old ovaries |
SRR553486 Makindu_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|
| .................CGAAGCGGACACCAAAACC............................................................................................................................ | 19 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| .........TTTCAGGGCGAAGCGGACACC.................................................................................................................................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................................GATTCAACAGTTCTGACG.................................................................. | 18 | 2 | 2 | 0.50 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...........................................................GCAATATTTGATTTGTCGATA................................................................................ | 21 | 3 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...................AAGCGGACACCTAGACC............................................................................................................................ | 17 | 2 | 5 | 0.20 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...........TCAGGGCCAGGCGGACA.................................................................................................................................... | 17 | 2 | 20 | 0.10 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| ......................................................TAAGAGCAATATTTGTTTTGTT.................................................................................... | 22 | 3 | 11 | 0.09 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..............................................CGTGGTTGGTAGCGCG.................................................................................................. | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .................................................................GTTGATTTGTTGAGTCAACA........................................................................... | 20 | 3 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................................................................................GAACGTTATGGTTATCAGA.................................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................................................AGTTGGTAGCGCACTA............................................................................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................AGGCGTGGTACTGAGC........ | 16 | 2 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................................................................................................GTTGTCGTCAGCTCTTGCC. | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
|
TAAATGCTGAAAGTCCCGCTTCGCCTGTGGTTTTGGGATGAGATAGTCACCAACCATCGCGTTATAAACAAAACAACTAAGTTGTGAAGATTGCAATACTAATAGTTTTCACAGAACAACTTCCTCCAGGGGTAAGTCCGCAACATGAGTCGGGAACGGG
**************************************************.(((((((((.(((.((.....(((((...))))).....)).))).)).)))))))...************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|
| ........................................................................................................GTTTTCCCAGAACAA......................................... | 15 | 1 | 9 | 0.11 | 1 | 1 | 0 |
| .................................................CCCTCCATCGCGTTATAT............................................................................................. | 18 | 3 | 20 | 0.05 | 1 | 1 | 0 |
| .........................TGTGCTTTTGGGAAGAGGT.................................................................................................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 1 |
Generated: 04/23/2015 at 11:48 PM